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Tomás Vinar
2010 – today
- 2013
[c27]Martina Visnovská, Tomás Vinar, Brona Brejová: DNA Sequence Segmentation Based on Local Similarity. ITAT 2013: 36-43- [c26]Martin Kravec, Martin Bobák, Brona Brejová, Tomás Vinar: Variants of Genes from the Next Generation Sequencing Data. ITAT 2013: 44-51
- [c25]Michal Nánási, Tomás Vinar, Brona Brejová: Probabilistic Approaches to Alignment with Tandem Repeats. WABI 2013: 287-299
- [e1]Tomás Vinar (Ed.): Proceedings of the Conference on Information Technologies - Applications and Theory, Donovaly, Slovakia, September 11-15, 2013. CEUR Workshop Proceedings 1003, CEUR-WS.org 2013
- 2012
- [c24]Peter Kovác, Brona Brejová, Tomás Vinar: Aligning sequences with repetitive motifs. ITAT 2012: 41-48
- [i4]Michal Nánási, Tomás Vinar, Brona Brejová: Sequence Annotation with HMMs: New Problems and Their Complexity. CoRR abs/1210.2587 (2012)
- 2011
- [c23]Bronislava Brejová, Stefan Dobrev, Rastislav Královic, Tomás Vinar: Routing in Carrier-Based Mobile Networks. SIROCCO 2011: 222-233
- [c22]Brona Brejová, Gad M. Landau, Tomás Vinar: Fast Computation of a String Duplication History under No-Breakpoint-Reuse - (Extended Abstract). SPIRE 2011: 144-155
- [c21]Brona Brejová, Michal Burger, Tomás Vinar: Automated Segmentation of DNA Sequences with Complex Evolutionary Histories. WABI 2011: 1-13
- [c20]Jakub Kovác, Brona Brejová, Tomás Vinar: A Practical Algorithm for Ancestral Rearrangement Reconstruction. WABI 2011: 163-174
- 2010
- [j8]Giltae Song, Louxin Zhang, Tomás Vinar, Webb Miller: CAGE: Combinatorial Analysis of Gene-Cluster Evolution. Journal of Computational Biology 17(9): 1227-1242 (2010)
- [j7]Tomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel: Reconstructing Histories of Complex Gene Clusters on a Phylogeny. Journal of Computational Biology 17(9): 1267-1279 (2010)
- [c19]Michal Nánási, Tomás Vinar, Brona Brejová: The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection. CPM 2010: 164-176
- [c18]Martina Visnovská, Michal Nánási, Tomás Vinar, Brona Brejová: Estimating effective DNA database size via compression. ITAT 2010: 63-70
- [i3]Michal Nánási, Tomás Vinar, Brona Brejová: The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection. CoRR abs/1001.4499 (2010)
2000 – 2009
- 2009
- [j6]Yu Zhang, Giltae Song, Tomás Vinar, Eric D. Green, Adam C. Siepel, Webb Miller: Evolutionary History Reconstruction for Mammalian Complex Gene Clusters. Journal of Computational Biology 16(8): 1051-1070 (2009)
- [c17]Giltae Song, Louxin Zhang, Tomás Vinar, Webb Miller: Inferring the Recent Duplication History of a Gene Cluster. RECOMB-CG 2009: 111-125
- [c16]Tomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel: Reconstructing Histories of Complex Gene Clusters on a Phylogeny. RECOMB-CG 2009: 150-163
- [c15]Jakub Kovác, Tomás Vinar, Brona Brejová: Predicting Gene Structures from Multiple RT-PCR Tests. WABI 2009: 181-193
- [i2]Tomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel: Bayesian History Reconstruction of Complex Human Gene Clusters on a Phylogeny. CoRR abs/0906.2635 (2009)
- 2008
- [c14]Yu Zhang, Giltae Song, Tomás Vinar, Eric D. Green, Adam C. Siepel, Webb Miller: Reconstructing the Evolutionary History of Complex Human Gene Clusters. RECOMB 2008: 29-49
- 2007
- [j5]Brona Brejová, Daniel G. Brown, Tomás Vinar: The most probable annotation problem in HMMs and its application to bioinformatics. J. Comput. Syst. Sci. 73(7): 1060-1077 (2007)
- [c13]Xuefeng Cui, Tomás Vinar, Brona Brejová, Dennis Shasha, Ming Li: Homology search for genes. ISMB/ECCB (Supplement of Bioinformatics) 2007: 97-103
- [c12]Rastislav Srámek, Brona Brejová, Tomás Vinar: On-Line Viterbi Algorithm for Analysis of Long Biological Sequences. WABI 2007: 240-251
- [i1]Rastislav Srámek, Brona Brejová, Tomás Vinar: On-line Viterbi Algorithm and Its Relationship to Random Walks. CoRR abs/0704.0062 (2007)
- 2006
- [c11]Brona Brejová, Daniel G. Brown, Ian M. Harrower, Tomás Vinar: New Bounds for Motif Finding in Strong Instances. CPM 2006: 94-105
- 2005
- [j4]Brona Brejová, Daniel G. Brown, Tomás Vinar: Vector seeds: An extension to spaced seeds. J. Comput. Syst. Sci. 70(3): 364-380 (2005)
- [c10]Brona Brejová, Daniel G. Brown, Ian M. Harrower, Alejandro López-Ortiz, Tomás Vinar: Sharper Upper and Lower Bounds for an Approximation Scheme for Consensus-Pattern. CPM 2005: 1-10
- [c9]Brona Brejová, Daniel G. Brown, Ming Li, Tomás Vinar: ExonHunter: a comprehensive approach to gene finding. ISMB (Supplement of Bioinformatics) 2005: 57-65
- 2004
- [j3]Brona Brejová, Daniel G. Brown, Tomás Vinar: Optimal Spaced Seeds for Homologous Coding Regions. J. Bioinformatics and Computational Biology 1(4): 595-610 (2004)
- [j2]Therese C. Biedl, Brona Brejová, Erik D. Demaine, Angèle M. Hamel, Alejandro López-Ortiz, Tomás Vinar: Finding hidden independent sets in interval graphs. Theor. Comput. Sci. 310(1-3): 287-307 (2004)
- [c8]Brona Brejová, Daniel G. Brown, Tomás Vinar: The Most Probable Labeling Problem in HMMs and Its Application to Bioinformatics. WABI 2004: 426-437
- 2003
- [j1]Therese C. Biedl, Jonathan F. Buss, Erik D. Demaine, Martin L. Demaine, Mohammad Taghi Hajiaghayi, Tomás Vinar: Palindrome recognition using a multidimensional tape. Theor. Comput. Sci. 302(1-3): 475-480 (2003)
- [c7]Therese C. Biedl, Brona Brejová, Erik D. Demaine, Angèle M. Hamel, Alejandro López-Ortiz, Tomás Vinar: Finding Hidden Independent Sets in Interval Graphs. COCOON 2003: 182-191
- [c6]Brona Brejová, Daniel G. Brown, Tomás Vinar: Optimal Spaced Seeds for Hidden Markov Models, with Application to Homologous Coding Regions. CPM 2003: 42-54
- [c5]Brona Brejová, Daniel G. Brown, Tomás Vinar: Vector Seeds: An Extension to Spaced Seeds Allows Substantial Improvements in Sensitivity and Specifity. WABI 2003: 39-54
- [c4]Brona Brejová, Daniel G. Brown, Tomás Vinar: Optimal DNA Signal Recognition Models with a Fixed Amount of Intrasignal Dependency. WABI 2003: 78-94
- 2002
- [c3]Therese C. Biedl, Masud Hasan, Joseph Douglas Horton, Alejandro López-Ortiz, Tomás Vinar: Searching for the center of a circle. CCCG 2002: 137-141
- [c2]Brona Brejová, Tomás Vinar: A Better Method for Length Distribution Modeling in HMMs and Its Application to Gene Finding. CPM 2002: 190-202
- 2000
- [c1]
Coauthor Index
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last updated on 2013-10-02 11:18 CEST by the dblp team