James M. Tiedje

Jason Pell, Arend Hintze, Rosangela Canino-Koning, Adina Howe, James M. Tiedje, C. Titus Brown: Workshop: Graph compression approaches in assembly. ICCABS 2012: 1-2

Bostjan Murovec, James M. Tiedje, Blaz Stres: DNA encoding for an efficient 'Omics processing. Computer Methods and Programs in Biomedicine 100(2): 175-190 (2010)

Blaz Stres, James M. Tiedje, Bostjan Murovec: BEsTRF: a tool for optimal resolution of terminal-restriction fragment length polymorphism analysis based on user-defined primer-enzyme-sequence databases. Bioinformatics 25(12): 1556-1558 (2009)

James R. Cole, Q. Wang, E. Cardenas, J. Fish, B. Chai, Ryan J. Farris, A. S. Kulam-Syed-Mohideen, D. M. McGarrell, Terry L. Marsh, George M. Garrity, James M. Tiedje: The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Research 37(Database-Issue): 141-145 (2009)

James R. Cole, B. Chai, Ryan J. Farris, Q. Wang, A. S. Kulam-Syed-Mohideen, D. M. McGarrell, A. M. Bandela, E. Cardenas, George M. Garrity, James M. Tiedje: The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Research 35(Database-Issue): 169-172 (2007)

James R. Cole, B. Chai, Ryan J. Farris, Q. Wang, S. A. Kulam, D. M. McGarrell, George M. Garrity, James M. Tiedje: The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Research 33(Database-Issue): 294-296 (2005)

John W. Urbance, James R. Cole, Paul Saxman, James M. Tiedje: BSD: the Biodegradative Strain Database. Nucleic Acids Research 31(1): 152-155 (2003)

James R. Cole, B. Chai, Terry L. Marsh, Ryan J. Farris, Q. Wang, S. A. Kulam, S. Chandra, D. M. McGarrell, Thomas M. Schmidt, George M. Garrity, James M. Tiedje: The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Research 31(1): 442-443 (2003)

Bonnie L. Maidak, James R. Cole, Timothy G. Lilburn, Charles T. Parker Jr., Paul Saxman, Ryan J. Farris, George M. Garrity, Gary J. Olsen, Thomas M. Schmidt, James M. Tiedje: The RDP-II (Ribosomal Database Project). Nucleic Acids Research 29(1): 173-174 (2001)

Bonnie L. Maidak, James R. Cole, Timothy G. Lilburn, Charles T. Parker Jr., Paul Saxman, Jason M. Stredwick, George M. Garrity, Bing Li, Gary J. Olsen, Sakti Pramanik, Thomas M. Schmidt, James M. Tiedje: The RDP (Ribosomal Database Project) continues. Nucleic Acids Research 28(1): 173-174 (2000)

Bonnie L. Maidak, James R. Cole, Charles T. Parker Jr., George M. Garrity, Niels Larsen, Bing Li, Timothy G. Lilburn, Michael J. McCaughey, Gary J. Olsen, Ross A. Overbeek, Sakti Pramanik, Thomas M. Schmidt, James M. Tiedje, Carl R. Woese: A new version of the RDP (Ribosomal Database Project). Nucleic Acids Research 27(1): 171-173 (1999)