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Julie Dawn Thompson
Julie D. Thompson
2010 – today
- 2013
[c1]Lina Fahed, Gabriel Frey, Julie Dawn Thompson, Nicolas Lachiche: Classification multi-étiquettes pour l'alignement multiple de séquences protéiques. EGC 2013: 431-436- 2012
- [j23]Tien-Dao Luu, Alin Rusu, Vincent Walter, Benjamin Linard, Laetitia Poidevin, Raymond Ripp, Luc Moulinier, Jean Muller, Wolfgang Raffelsberger, Nicolas Wicker, Odile Lecompte, Julie D. Thompson, Olivier Poch, Hoan Nguyen: KD4v: comprehensible knowledge discovery system for missense variant. Nucleic Acids Research 40(Web-Server-Issue): 71-75 (2012)
- 2011
- [j22]Benjamin Linard, Julie D. Thompson, Olivier Poch, Odile Lecompte: OrthoInspector: comprehensive orthology analysis and visual exploration. BMC Bioinformatics 12: 11 (2011)
- [j21]Christopher J. Creevey, Jean Muller, Tobias Doerks, Julie D. Thompson, Detlev Arendt, Peer Bork: Identifying Single Copy Orthologs in Metazoa. PLoS Computational Biology 7(12) (2011)
- 2010
- [j20]Jean Muller, Christopher J. Creevey, Julie D. Thompson, Detlev Arendt, Peer Bork: AQUA: automated quality improvement for multiple sequence alignments. Bioinformatics 26(2): 263-265 (2010)
2000 – 2009
- 2009
- [j19]Mohamed Radhouene Aniba, Sophie Siguenza, Anne Friedrich, Frédéric Plewniak, Olivier Poch, Aron Marchler-Bauer, Julie Dawn Thompson: Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis. Briefings in Bioinformatics 10(1): 11-23 (2009)
- [j18]Philippe Gouret, Julie D. Thompson, Pierre Pontarotti: PhyloPattern: regular expressions to identify complex patterns in phylogenetic trees. BMC Bioinformatics 10: 298 (2009)
- [j17]Valentín Ruano-Rubio, Olivier Poch, Julie D. Thompson: Comparison of eukaryotic phylogenetic profiling approaches using species tree aware methods. BMC Bioinformatics 10: 383 (2009)
- 2008
- [j16]Emmanuel Perrodou, Claudia Chica, Olivier Poch, Toby J. Gibson, Julie Dawn Thompson: A new protein linear motif benchmark for multiple sequence alignment software. BMC Bioinformatics 9 (2008)
- 2007
- [j15]M. A. Larkin, Gordon Blackshields, N. P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins: Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948 (2007)
- 2006
- [j14]Nicolas Garnier, Anne Friedrich, Raphael Bolze, Emmanuel Bettler, Luc Moulinier, Christophe Geourjon, Julie Dawn Thompson, Gilbert Deléage, Olivier Poch: MAGOS: multiple alignment and modelling server. Bioinformatics 22(17): 2164-2165 (2006)
- [j13]Julie D. Thompson, Arnaud Muller, Andrew M. Waterhouse, James B. Procter, Geoffrey J. Barton, Frédéric Plewniak, Olivier Poch: MACSIMS : multiple alignment of complete sequences information management system. BMC Bioinformatics 7: 318 (2006)
- 2005
- [j12]Frédéric Chalmel, Aurélie Lardenois, Julie Dawn Thompson, Jean Muller, José-Alain Sahel, Thierry Léveillard, Olivier Poch: GOAnno: GO annotation based on multiple alignment. Bioinformatics 21(9): 2095-2096 (2005)
- [j11]Laurent Bianchetti, Julie Dawn Thompson, Odile Lecompte, Frédéric Plewniak, Olivier Poch: Valid: Validation of Protein Sequence Quality Based on Multiple Alignment Data. J. Bioinformatics and Computational Biology 3(4): 929-948 (2005)
- 2003
- [j10]Julie Dawn Thompson, Jean-Claude Thierry, Olivier Poch: RASCAL: Rapid Scanning and Correction of Multiple Sequence Alignments. Bioinformatics 19(9): 1155-1161 (2003)
- [j9]Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Research 31(13): 3497-3500 (2003)
- [j8]Frédéric Plewniak, Laurent Bianchetti, Yann Brelivet, Annaick Carles, Frédéric Chalmel, Odile Lecompte, Thiebaut Mochel, Luc Moulinier, Arnaud Muller, Jean Muller, Veronique Prigent, Raymond Ripp, Jean-Claude Thierry, Julie Dawn Thompson, Nicolas Wicker, Olivier Poch: PipeAlign: a new toolkit for protein family analysis. Nucleic Acids Research 31(13): 3829-3832 (2003)
- 2001
- [j7]Anne Bahr, Julie Dawn Thompson, Jean-Claude Thierry, Olivier Poch: BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations. Nucleic Acids Research 29(1): 323-326 (2001)
- 2000
- [j6]Frédéric Plewniak, Julie Dawn Thompson, Olivier Poch: Ballast: Blast post-processing based on locally conserved segments. Bioinformatics 16(9): 750-759 (2000)
1990 – 1999
- 1999
- [j5]Julie Dawn Thompson, Frédéric Plewniak, Olivier Poch: BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs. Bioinformatics 15(1): 87-88 (1999)
- [j4]Julie Dawn Thompson, Frédéric Plewniak, Olivier Poch: A comprehensive comparison of multiple sequence alignment programs. Nucleic Acids Research 27(13): 2682-2690 (1999)
- 1995
- [j3]Julie Dawn Thompson: Introducing variable gap penalties to sequence alignment in linear space. Computer Applications in the Biosciences 11(2): 181-186 (1995)
- 1994
- [j2]Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Computer Applications in the Biosciences 10(1): 19-29 (1994)
- [j1]Toby J. Gibson, Julie Dawn Thompson: Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases. Nucleic Acids Research 22(13): 2552-2556 (1994)
Coauthor Index
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last updated on 2013-03-15 01:13 CET by the dblp team