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Oznur Tastan
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2020 – today
- 2023
- [j17]Onur Can Uner, Halil Ibrahim Kuru, Ramazan Gokberk Cinbis, Oznur Tastan, A. Ercüment Çiçek:
DeepSide: A Deep Learning Approach for Drug Side Effect Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 20(1): 330-339 (2023) - 2022
- [j16]Serhan Yilmaz, Mohamad Fakhouri, Mehmet Koyutürk, A. Ercüment Çiçek, Oznur Tastan:
Uncovering complementary sets of variants for predicting quantitative phenotypes. Bioinform. 38(4): 908-917 (2022) - [j15]Gulden Olgun, Oznur Tastan:
miRCoop: Identifying Cooperating miRNAs via Kernel Based Interaction Tests. IEEE ACM Trans. Comput. Biol. Bioinform. 19(3): 1760-1771 (2022) - [j14]Halil Ibrahim Kuru, Oznur Tastan, A. Ercüment Çiçek:
MatchMaker: A Deep Learning Framework for Drug Synergy Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 19(4): 2334-2344 (2022) - 2021
- [j13]Yasin Ilkagan Tepeli, Ali Burak Ünal, Furkan Mustafa Akdemir, Oznur Tastan:
PAMOGK: a pathway graph kernel-based multiomics approach for patient clustering. Bioinform. 36(21): 5237-5246 (2021) - [j12]Gulden Olgun, Afshan Nabi, Oznur Tastan:
NoRCE: non-coding RNA sets cis enrichment tool. BMC Bioinform. 22(1): 294 (2021) - [j11]Gulden Olgun, Afshan Nabi, Oznur Tastan:
Correction to: NoRCE: non‑coding RNA sets cis enrichment tool. BMC Bioinform. 22(1): 393 (2021) - [j10]Gizem Caylak, Oznur Tastan, A. Ercüment Çiçek:
Potpourri: An Epistasis Test Prioritization Algorithm via Diverse SNP Selection. J. Comput. Biol. 28(4): 365-377 (2021) - [j9]Gizem Caylak, Oznur Tastan, A. Ercüment Çiçek:
A Tool for Detecting Complementary Single Nucleotide Polymorphism Pairs in Genome-Wide Association Studies for Epistasis Testing. J. Comput. Biol. 28(4): 378-380 (2021) - [j8]Halil Ibrahim Kuru, Mustafa Buyukozkan, Oznur Tastan:
PRER: A patient representation with pairwise relative expression of proteins on biological networks. PLoS Comput. Biol. 17(5) (2021) - [j7]Serhan Yilmaz, Oznur Tastan, A. Ercüment Çiçek:
SPADIS: An Algorithm for Selecting Predictive and Diverse SNPs in GWAS. IEEE ACM Trans. Comput. Biol. Bioinform. 18(3): 1208-1216 (2021) - [i1]Nour Almadhoun Alserr, Gulce Kale, Onur Mutlu, Oznur Tastan, Erman Ayday:
Near-Optimal Privacy-Utility Tradeoff in Genomic Studies Using Selective SNP Hiding. CoRR abs/2106.05211 (2021) - 2020
- [j6]Iman Deznabi, Busra Arabaci, Mehmet Koyutürk, Oznur Tastan:
DeepKinZero: zero-shot learning for predicting kinase-phosphosite associations involving understudied kinases. Bioinform. 36(12): 3652-3661 (2020) - [c6]Gulden Olgun, Oznur Tastan:
Functional Enrichment Analysis of Deregulated Long Non-Coding RNAs in Cancer Based on their Genomic Neighbors. BCB 2020: 9:1-9:10
2010 – 2019
- 2018
- [j5]Gulce Kale, Erman Ayday, Oznur Tastan:
A utility maximizing and privacy preserving approach for protecting kinship in genomic databases. Bioinform. 34(2): 181-189 (2018) - [j4]Iman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday:
An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information. IEEE ACM Trans. Comput. Biol. Bioinform. 15(4): 1333-1343 (2018) - 2017
- [j3]Burçak Otlu, Can Firtina, Sündüz Keles, Oznur Tastan:
GLANET: genomic loci annotation and enrichment tool. Bioinform. 33(18): 2818-2828 (2017) - 2015
- [c5]Oznur Tastan, Yanjun Qi, Jaime G. Carbonell, Judith Klein-Seetharaman:
Refining Literature Curated Protein Interactions Using Expert Opinions. Pacific Symposium on Biocomputing 2015: 318-329 - 2011
- [j2]Zhongming Zhao, Junfeng Xia, Oznur Tastan, Irtisha Singh, Meghana Kshirsagar, Jaime G. Carbonell, Judith Klein-Seetharaman:
Virus interactions with human signal transduction pathways. Int. J. Comput. Biol. Drug Des. 4(1): 83-105 (2011) - 2010
- [j1]Yanjun Qi, Oznur Tastan, Jaime G. Carbonell, Judith Klein-Seetharaman, Jason Weston:
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins. Bioinform. 26(18) (2010) - [c4]Irtisha Singh, Oznur Tastan, Judith Klein-Seetharaman:
Comparison of virus interactions with human signal transduction pathways. BCB 2010: 17-24 - [c3]Subhodeep Moitra, Naveena Yanamala, Oznur Tastan, Irtisha Singh, Christopher James Langmead, Judith Klein-Seetharaman:
Analogies between structural and systems biology and systems-of-systems engineering in dynamic environments. SoSE 2010: 1-7
2000 – 2009
- 2009
- [c2]Sivaraman Balakrishnan, Oznur Tastan, Jaime G. Carbonell, Judith Klein-Seetharaman:
Communication interception of human signal transduction pathways by Human Immunodeficiency Virus-1. GENSiPS 2009: 1-4 - [c1]Oznur Tastan, Yanjun Qi, Jaime G. Carbonell, Judith Klein-Seetharaman:
Prediction of Interactions Between HIV-1 and Human Proteins by Information Integration. Pacific Symposium on Biocomputing 2009: 516-527
Coauthor Index
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last updated on 2023-10-02 00:39 CEST by the dblp team
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