Jochen Supper

Thomas Strach, Frank E. Bosco, Kenneth L. Christian, Kevin R. Covi, Martin Eckert, Gregory R. Edlund, Roland Frech, Hubert Harrer, Andreas Huber, Dierk Kaller, Martin Kindscher, A. Z. Muszynski, G. A. Peterson, Claudio Siviero, Jochen Supper, Otto A. Torreiter, Thomas-Michael Winkel: Electronic packaging of the IBM System z196 enterprise-class server processor cage. IBM Journal of Research and Development 56(1): 2 (2012)

Hannes Planatscher, Jochen Supper, Oliver Poetz, Dieter Stoll, Thomas Joos, Markus F. Templin, Andreas Zell: Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry. Algorithms for Molecular Biology 5: 28 (2010)

Jochen Supper: Computational inference of gene regulatory networks. Eberhard Karls University of Tübingen 2009, isbn 978-3-86853-210-4, pp. 1-162

Thomas-Michael Winkel, Hubert Harrer, Dierk Kaller, Jochen Supper, Daniel M. Dreps, Kenneth L. Christian, D. Cosmadelis, Tingdong Zhou, Thomas Strach, J. Ludwig, David L. Edwards: Packaging design challenges of the IBM System z10 Enterprise Class server. IBM Journal of Research and Development 53(1): 10 (2009)

Jochen Supper, C. A. Kampe, Dierk Wanke, Kenneth W. Berendzen, Klaus Harter, R. Bonneau, Andreas Zell: Modeling gene regulation and spatial organization of sequence based motifs. BIBE 2008: 1-7

Jochen Supper, Martin Strauch, Dierk Wanke, Klaus Harter, Andreas Zell: EDISA: extracting biclusters from multiple time-series of gene expression profiles. BMC Bioinformatics 8 (2007)

Martin Strauch, Jochen Supper, Christian Spieth, Dierk Wanke, Joachim Kilian, Klaus Harter, Andreas Zell: A Two-Step Clustering for 3-D Gene Expression Data Reveals the Main Features of the Arabidopsis Stress Response. J. Integrative Bioinformatics 4(1) (2007)

Jochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, Andreas Zell: Inferring Gene Regulatory Networks by Machine Learning Methods. APBC 2007: 247-256

Jochen Supper, Holger Fröhlich, Andreas Zell: Gene Regulatory Network Inference via Regression Based Topological Refinement. APBC 2007: 267-276

Andreas Dräger, Jochen Supper, Hannes Planatscher, Jørgen B. Magnus, Marco Oldiges, Andreas Zell: Comparing various evolutionary algorithms on the parameter optimization of the valine and leucine biosynthesis in corynebacterium glutamicum. IEEE Congress on Evolutionary Computation 2007: 620-627

Andreas Dräger, Marcel Kronfeld, Jochen Supper, Hannes Planatscher, Jørgen B. Magnus, Marco Oldiges, Andreas Zell: Benchmarking evolutionary algorithms on convenience kinetics modelsof the valine and leucine biosynthesis in C. glutamicum. IEEE Congress on Evolutionary Computation 2007: 896-903

Jochen Supper, Christian Spieth, Andreas Zell: Reconstructing Linear Gene Regulatory Networks. EvoBIO 2007: 270-279

Christian Spieth, Jochen Supper, Felix Streichert, Nora Speer, Andreas Zell: JCell - a Java-based framework for inferring regulatory networks from time series data. Bioinformatics 22(16): 2051-2052 (2006)

Christian Spieth, Felix Streichert, Jochen Supper, Nora Speer, Andreas Zell: Feedback Memetic Algorithms for Modeling Gene Regulatory Networks. CIBCB 2005: 61-67

Jochen Supper, Christian Spieth, Andreas Zell: Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage lambda cI Circuit. CIBCB 2005: 325-332

Jochen Supper, Pierre Dönnes, Oliver Kohlbacher: Analysis of MHC-Peptide Binding Using Amino Acid Property-Based Decision Rules. ICAPR (1) 2005: 446-453