Nathan Salomonis

Chao Zhang, Kristina Hanspers, Allan Kuchinsky, Nathan Salomonis, Dong Xu, Alexander R. Pico: Mosaic: making biological sense of complex networks. Bioinformatics 28(14): 1943-1944 (2012)

Alexander C. Zambon, Stan Gaj, Isaac Ho, Kristina Hanspers, Karen Vranizan, Chris T. A. Evelo, Bruce R. Conklin, Alexander R. Pico, Nathan Salomonis: GO-Elite: a flexible solution for pathway and ontology over-representation. Bioinformatics 28(16): 2209-2210 (2012)

Nathan Salomonis: AltAnalyze - An Optimized Platform for RNA-Seq Splicing and Domain-Level Analyses. HISB 2012: 113

Nathan Salomonis: LineageProfiler: Automated Classification and Visualization of Cell Type Identity for Mammalian Transcriptomes. HISB 2012: 114

Zhuohui Gan, Jianwu Wang, Nathan Salomonis, Ilkay Altintas, Andrew D. McCulloch, Alexander C. Zambon: MAAMD: A Workflow to Standardize Meta-Analyses of Affymetrix Microarray Data. HISB 2012: 120

Dorothea Emig, Nathan Salomonis, Jan Baumbach, Thomas Lengauer, Bruce R. Conklin, Mario Albrecht: AltAnalyze and DomainGraph: analyzing and visualizing exon expression data. Nucleic Acids Research 38(Web-Server-Issue): 755-762 (2010)

Nathan Salomonis, Brandon Nelson, Karen Vranizan, Alexander R. Pico, Kristina Hanspers, Allan Kuchinsky, Linda Ta, Mark Mercola, Bruce R. Conklin: Alternative Splicing in the Differentiation of Human Embryonic Stem Cells into Cardiac Precursors. PLoS Computational Biology 5(11) (2009)

Nathan Salomonis, Kristina Hanspers, Alexander C. Zambon, Karen Vranizan, Steven C. Lawlor, Kam D. Dahlquist, Scott Doniger, Joshua M. Stuart, Bruce R. Conklin, Alexander R. Pico: GenMAPP 2: new features and resources for pathway analysis. BMC Bioinformatics 8 (2007)

Melissa S. Cline, John Blume, Simon Cawley, Tyson Clark, Jing-Shan Hu, Gang Lu, Nathan Salomonis, Hui Wang, Alan Williams: ANOSVA: a statistical method for detecting splice variation from expression data. ISMB (Supplement of Bioinformatics) 2005: 107-115