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Jyotishman Pathak
2010 – today
- 2013
[j16]Cui Tao, Guoqian Jiang, Thomas A. Oniki, Robert R. Freimuth, Qian Zhu, Deepak K. Sharma, Jyotishman Pathak, Stanley M. Huff, Christopher G. Chute: A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data. JAMIA 20(3): 554-562 (2013)- [j15]Cui Tao, Jyotishman Pathak, Harold R. Solbrig, Wei-Qi Wei, Christopher G. Chute: Terminology representation guidelines for biomedical ontologies in the semantic web notations. Journal of Biomedical Informatics 46(1): 128-138 (2013)
- [j14]Qian Zhu, Robert R. Freimuth, Zonghui Lian, Scott Bauer, Jyotishman Pathak, Cui Tao, Matthew J. Durski, Christopher G. Chute: Harmonization and semantic annotation of data dictionaries from the Pharmacogenomics Research Network: A case study. Journal of Biomedical Informatics 46(2): 286-293 (2013)
- [j13]Qian Zhu, Robert R. Freimuth, Jyotishman Pathak, Matthew J. Durski, Christopher G. Chute: Disambiguation of PharmGKB drug-disease relations with NDF-RT and SPL. Journal of Biomedical Informatics 46(4): 690-696 (2013)
- [c31]Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute: Mining Anti-coagulant Drug-Drug Interactions from Electronic Health Records Using Linked Data. DILS 2013: 128-140
- [c30]Cui Tao, Dingcheng Li, Feichen Shen, Zonghui Lian, Jyotishman Pathak, Hongfang Liu, Christopher G. Chute: Phenotyping on EHR Data Using OWL and Semantic Web Technologies. ICSH 2013: 31-32
- [c29]Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute: Using Linked Data for Mining Drug-Drug Interactions in Electronic Health Records. MedInfo 2013: 682-686
- 2012
- [j12]Jyotishman Pathak, Richard C. Kiefer, Suzette J. Bielinski, Christopher G. Chute: Applying semantic web technologies for phenome-wide scan using an electronic health record linked Biobank. J. Biomedical Semantics 3: 10 (2012)
- [j11]Peggy L. Peissig, Luke V. Rasmussen, Richard L. Berg, James G. Linneman, Catherine A. McCarty, Carol Waudby, Lin Chen, Joshua C. Denny, Russell A. Wilke, Jyotishman Pathak, David Carrell, Abel N. Kho, Justin B. Starren: Importance of multi-modal approaches to effectively identify cataract cases from electronic health records. JAMIA 19(2): 225-234 (2012)
- [j10]Susan Rea, Jyotishman Pathak, Guergana K. Savova, Thomas A. Oniki, Les Westberg, Calvin E. Beebe, Cui Tao, Craig G. Parker, Peter J. Haug, Stanley M. Huff, Christopher G. Chute: Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project. Journal of Biomedical Informatics 45(4): 763-771 (2012)
- [c28]Cui Tao, Guoqian Jiang, Thomas A. Oniki, Robert R. Freimuth, Jyotishman Pathak, Qian Zhu, Deepak K. Sharma, Stanley M. Huff, Christopher G. Chute: A Semantic-Web Oriented Representation of Clinical Element Model for Secondary Use of Electronic Healthcare Data. HISB 2012: 133
- [c27]Rachel L. Richesson, Jyotishman Pathak, Wendy McLeod, Ginger Blackmon, Kendra Vehik: Requirements and Strategy for the Development of a Pediatric Drug Ontology. ICBO 2012
- [c26]Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute: Applying linked data principles to represent patient's electronic health records at Mayo clinic: a case report. IHI 2012: 455-464
- [e1]Alejandro Rodríguez González, Jyotishman Pathak, Mark Wilkinson, Nigam Shah, Robert Stevens, Richard D. Boyce, Ángel García-Crespo (Eds.): Proceedings of the Joint Workshop on Semantic Technologies Applied to Biomedical Informatics and Individualized Medicine, Boston, USA, November 12, 2012. CEUR Workshop Proceedings 930, CEUR-WS.org 2012
- 2011
- [j9]Jyotishman Pathak, Christopher G. Chute: Letter: Further revamping VA's NDF-RT drug terminology for clinical research. JAMIA 18(3): 347-348 (2011)
- [j8]Jyotishman Pathak, Janey Wang, Sudha Kashyap, Melissa A. Basford, Rongling Li, Daniel R. Masys, Christopher G. Chute: Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience. JAMIA 18(4): 376-386 (2011)
- [c25]Guoqian Jiang, Jon D. Duke, Jyotishman Pathak, Christopher G. Chute: An Ontological Representation of Adverse Drug Events. ICBO 2011
- [c24]Jyotishman Pathak, Shawn P. Murphy, Brian N. Willaert, Hilal M. Kremers, Christopher G. Chute, Barbara P. Yawn, Walter A. Rocca: Using RxNorm to Extract Medication Data from Electronic Health Records in the Rochester Epidemiology Project. ICBO 2011
- [c23]Jyotishman Pathak, Richard C. Kiefer, Christopher G. Chute: The linked clinical data project: applying semantic web technologies for clinical and translational research using electronic medical records. SWAT4LS 2011: 94-95
- 2010
- [j7]Jyotishman Pathak, Christopher G. Chute: Analyzing categorical information in two publicly available drug terminologies: RxNorm and NDF-RT. JAMIA 17(4): 432-439 (2010)
- [j6]Iftikhar J. Kullo, Jin Fan, Jyotishman Pathak, Guergana K. Savova, Zeenat Ali, Christopher G. Chute: Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease. JAMIA 17(5): 568-574 (2010)
- [j5]Jyotishman Pathak, Lee B. Peters, Christopher G. Chute, Olivier Bodenreider: Comparing and evaluating terminology services application programming interfaces: RxNav, UMLSKS and LexBIG. JAMIA 17(6): 714-719 (2010)
2000 – 2009
- 2009
- [j4]Jyotishman Pathak, Thomas M. Johnson, Christopher G. Chute: Survey of modular ontology techniques and their applications in the biomedical domain. Integrated Computer-Aided Engineering 16(3): 225-242 (2009)
- [j3]Jyotishman Pathak, Harold R. Solbrig, James D. Buntrock, Thomas M. Johnson, Christopher G. Chute: Implementation Brief: LexGrid: A Framework for Representing, Storing, and Querying Biomedical Terminologies from Simple to Sublime. JAMIA 16(3): 305-315 (2009)
- [j2]Guoqian Jiang, Jyotishman Pathak, Christopher G. Chute: Formalizing ICD coding rules using Formal Concept Analysis. Journal of Biomedical Informatics 42(3): 504-517 (2009)
- 2008
- [j1]Jyotishman Pathak, Samik Basu, Robyn R. Lutz, Vasant Honavar: MOSCOE: an Approach for Composing Web Services through Iterative Reformulation of Functional Specifications. International Journal on Artificial Intelligence Tools 17(1): 109-138 (2008)
- [c22]Jyotishman Pathak, Samik Basu, Vasant Honavar: Composing Web Services through Automatic Reformulation of Service Specifications. IEEE SCC (1) 2008: 361-369
- [c21]Jyotishman Pathak, James D. Buntrock, Christopher G. Chute: LexSearch: An Approach for Leveraging Semantic Annotations to Searching Ontologies. AAAI Spring Symposium: Semantic Scientific Knowledge Integration 2008: 68-73
- [c20]Jyotishman Pathak, Thomas M. Johnson, Christopher G. Chute: Modular ontology techniques and their applications in the biomedical domain. IRI 2008: 351-356
- [c19]Jyotishman Pathak, Guoqian Jiang, Sridhar O. Dwarkanath, James D. Buntrock, Christopher G. Chute: Adopting Graph Traversal Techniques for Context-Driven Value Sets Extraction from Biomedical Knowledge Sources. ICSC 2008: 460-467
- 2007
- [c18]Nithya Rajamani, Murthy V. Devarakonda, Yu Deng, Wlodek Zadrozny, Jyotishman Pathak: Business-Activity Driven Search: Addressing the Information Needs of Services Professionals. IEEE SCC 2007: 644-651
- [c17]James D. McCalley, Vasant Honavar, Sarah M. Ryan, William Q. Meeker, Daji Qiao, Ronald A. Roberts, Yuan Li, Jyotishman Pathak, Mujing Ye, Yili Hong: Integrated Decision Algorithms for Auto-steered Electric Transmission System Asset Management. International Conference on Computational Science (1) 2007: 1066-1073
- [c16]Jyotishman Pathak, Samik Basu, Vasant Honavar: On Context-Specific Substitutability of Web Services. ICWS 2007: 192-199
- [p1]Jyotishman Pathak, Samik Basu, Vasant Honavar: Assembling Composite Web Services from Autonomous Components. Emerging Artificial Intelligence Applications in Computer Engineering 2007: 394-405
- 2006
- [c15]Doina Caragea, Jun Zhang, Jyotishman Pathak, Vasant Honavar: Learning Classifiers from Distributed, Ontology-Extended Data Sources. DaWaK 2006: 363-373
- [c14]Jyotishman Pathak, Samik Basu, Robyn R. Lutz, Vasant Honavar: Parallel Web Service Composition in MoSCoE: A Choreography-Based Approach. ECOWS 2006: 3-12
- [c13]Jyotishman Pathak, Yong Jiang, Vasant Honavar, James D. McCalley: Condition Data Aggregation with Application to Failure Rate Calculation of Power Transformers. HICSS 2006
- [c12]Jyotishman Pathak, Samik Basu, Robyn R. Lutz, Vasant Honavar: MoSCoE: A Framework for Modeling Web Service Composition and Execution. ICDE Workshops 2006: 143
- [c11]Jyotishman Pathak, Yuan Li, Vasant Honavar, James D. McCalley: A Service-Oriented Architecture for Electric Power Transmission System Asset Management. ICSOC Workshops 2006: 26-37
- [c10]Jyotishman Pathak, Samik Basu, Vasant Honavar: Modeling Web Services by Iterative Reformulation of Functional and Non-functional Requirements. ICSOC 2006: 314-326
- [c9]Jyotishman Pathak, Samik Basu, Robyn R. Lutz, Vasant Honavar: Selecting and Composing Web Services through Iterative Reformulation of Functional Specifications. ICTAI 2006: 445-454
- 2005
- [c8]Doina Caragea, Jun Zhang, Jie Bao, Jyotishman Pathak, Vasant Honavar: Algorithms and Software for Collaborative Discovery from Autonomous, Semantically Heterogeneous, Distributed Information Sources. ALT 2005: 13-44
- [c7]Doina Caragea, Jie Bao, Jyotishman Pathak, Adrian Silvescu, Carson M. Andorf, Drena Dobbs, Vasant Honavar: Information Integration from Semantically Heterogeneous Biological Data Sources. DEXA Workshops 2005: 580-584
- [c6]Doina Caragea, Jyotishman Pathak, Jie Bao, Adrian Silvescu, Carson M. Andorf, Drena Dobbs, Vasant Honavar: Information Integration and Knowledge Acquisition from Semantically Heterogeneous Biological Data Sources. DILS 2005: 175-190
- [c5]Doina Caragea, Jun Zhang, Jie Bao, Jyotishman Pathak, Vasant Honavar: Algorithms and Software for Collaborative Discovery from Autonomous, Semantically Heterogeneous, Distributed Information Sources. Discovery Science 2005: 14
- [c4]Jyotishman Pathak, Neeraj Koul, Doina Caragea, Vasant Honavar: A framework for semantic web services discovery. WIDM 2005: 45-50
- 2004
- [c3]Doina Caragea, Jyotishman Pathak, Vasant Honavar: Learning Classifiers from Semantically Heterogeneous Data. CoopIS/DOA/ODBASE (2) 2004: 963-980
- [c2]Jyotishman Pathak, Doina Caragea, Vasant Honavar: Ontology-Extended Component-Based Workflows : A Framework for Constructing Complex Workflows from Semantically Heterogeneous Software Components. SWDB 2004: 41-56
- 2003
- [c1]Jaime Reinoso, Adrian Silvescu, Doina Caragea, Jyotishman Pathak, Vasant Honavar: Information Extraction and Integration from Heterogeneous, Distributed, Autonomous Information Sources : A Federated Ontology-Driven Query-Centric Approach. IRI 2003: 183-191
Coauthor Index
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last updated on 2013-10-02 11:13 CEST by the dblp team