Yi Pan

Shouling Ji, Jing (Selena) He, Yi Pan, Yingshu Li: Continuous data aggregation and capacity in probabilistic wireless sensor networks. J. Parallel Distrib. Comput. 73(6): 729-745 (2013)

Min Li, Xuehong Wu, Jianxin Wang, Yi Pan: Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data. BMC Bioinformatics 13: 109 (2012)

Jingjing Gao, Yi Pan, Michael Haber: Assessment of observer agreement for matched repeated binary measurements. Computational Statistics & Data Analysis 56(5): 1052-1060 (2012)

Didi Rosiyadi, Shi-Jinn Horng, Pingzhi Fan, Xian Wang, Muhammad Khurram Khan, Yi Pan: Copyright Protection for E-Government Document Images. IEEE MultiMedia 19(3): 62-73 (2012)

Jing He, Shouling Ji, Mingyuan Yan, Yi Pan, Yingshu Li: Load-balanced CDS construction in wireless sensor networks via genetic algorithm. IJSNet 11(3): 166-178 (2012)

Jianxin Wang, Min Li, Huan Wang, Yi Pan: Identification of Essential Proteins Based on Edge Clustering Coefficient. IEEE/ACM Trans. Comput. Biology Bioinform. 9(4): 1070-1080 (2012)

Jianxin Wang, Yuannan Huang, Fang-Xiang Wu, Yi Pan: Symmetry Compression Method for Discovering Network Motifs. IEEE/ACM Trans. Comput. Biology Bioinform. 9(6): 1776-1789 (2012)

Zhe Wang, Tao Li, Naixue Xiong, Yi Pan: A novel dynamic network data replication scheme based on historical access record and proactive deletion. The Journal of Supercomputing 62(1): 227-250 (2012)

Zhe Wang, Tao Li, Naixue Xiong, Yi Pan: Erratum to: A novel dynamic network data replication scheme based on historical access record and proactive deletion. The Journal of Supercomputing 62(1): 616 (2012)

Xiwei Tang, Jianxin Wang, Yi Pan: Identifying essential proteins via integration of protein interaction and gene expression data. BIBM 2012: 1-4

Jing He, Shouling Ji, Yi Pan, Zhipeng Cai: Load-Balanced Virtual Backbone Construction for Wireless Sensor Networks. COCOA 2012: 1-12

Kai Qian, Chia-Tien Dan Lo, Yi Pan, Yanqing Zhang, Xiaolin Hu, Liang Hong: Real-World Relevant Learning with Android Smartphones. ICALT 2012: 476-477

Naixue Xiong, Athanasios V. Vasilakos, Jie Wu, Y. Richard Yang, Andy Rindos, Yuezhi Zhou, Wen-Zhan Song, Yi Pan: A Self-tuning Failure Detection Scheme for Cloud Computing Service. IPDPS 2012: 668-679

Thomas Rauber, Gudula Rünger, Peter Strazdins, Laurence Tianruo Yang, Guangming Tan, Yi Pan: PDSEC Introduction. IPDPS Workshops 2012: 1341-1342

Hung-Chuan Lai, Shi-Jinn Horng, Pingzhi Fan, Xian Wang, Yi Pan: An Efficient Run Time Control Flow Errors Detection by DCT Technique. ISBAST 2012: 134-150

Kai Qian, Chia-Tien Dan Lo, Yi Pan, Yanqing Zhang, Xiaolin Hu, Liang Hong: The cross-curriculum mobile computing labware for CS (abstract only). SIGCSE 2012: 664

Xinyi Liu, Xubo Su, Fei Wang, Zhimin Huang, Qi Wang, Zhen Li, Ruina Zhang, Lifang Wu, Yi Pan, Yingyi Chen, Hanyi Zhuang, Guoqiang Chen, Ting Shi, Jian Zhang: ODORactor: a web server for deciphering olfactory coding. Bioinformatics 27(16): 2302-2303 (2011)

Xiwei Tang, Jianxin Wang, Binbin Liu, Min Li, Gang Chen, Yi Pan: A comparison of the functional modules identified from time course and static PPI network data. BMC Bioinformatics 12: 339 (2011)

Min Li, Jianxin Wang, Xiang Chen, Huan Wang, Yi Pan: A local average connectivity-based method for identifying essential proteins from the network level. Computational Biology and Chemistry 35(3): 143-150 (2011)

Wooyoung Kim, Bernard Chen, Jingu Kim, Yi Pan, Haesun Park: Sparse nonnegative matrix factorization for protein sequence motif discovery. Expert Syst. Appl. 38(10): 13198-13207 (2011)

Ken D. Nguyen, Yi Pan: Multiple sequence alignment based on dynamic weighted guidance tree. IJBRA 7(2): 168-182 (2011)

Naixue Xiong, Andy Rindos, Michael L. Russell, Kelly P. Robinson, Art Vandenberg, Yi Pan: Sharing computing resources to satisfy multi-cloud user requirements. IJCC 1(1): 81-100 (2011)

Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan: Understandable learning machine system design for Transmembrane or Embedded Membrane segments prediction. IJDMB 5(1): 38-51 (2011)

John J. Hanfelt, Ruosha Li, Yi Pan, Pierre Payment: Robust inference for sparse cluster-correlated count data. J. Multivariate Analysis 102(1): 182-192 (2011)

Yi Pan, David I. Shreiber, Assimina A. Pelegri: A Transition Model for Finite Element Simulation of Kinematics of Central Nervous System White Matter. IEEE Trans. Biomed. Engineering 58(12): 3443-3446 (2011)

Jianxin Wang, Min Li, Jianer Chen, Yi Pan: A Fast Hierarchical Clustering Algorithm for Functional Modules Discovery in Protein Interaction Networks. IEEE/ACM Trans. Comput. Biology Bioinform. 8(3): 607-620 (2011)

Naixue Xiong, Fan Yang, Hongyan Li, Jong Hyuk Park, Yuan-Shun Dai, Yi Pan: Security analysis and improvements of IEEE standard 802.16 in next generation wireless metropolitan access network. Wireless Communications and Mobile Computing 11(2): 163-175 (2011)

Naixue Xiong, Yan Yang, Jong Hyuk Park, Athanasios V. Vasilakos, Xuefeng Yan, Yi Pan: Self-stabilizing flocking of a group of mobile robots with memory corruption. Wireless Communications and Mobile Computing 11(8): 1061-1072 (2011)

Jun Xiao, Naixue Xiong, Athanasios V. Vasilakos, Yi Pan: Effective monitoring and control - centralized schemes in third generation router based WiMAX mesh network. Wireless Communications and Mobile Computing 11(8): 1117-1126 (2011)

Jianxin Wang, Xiaoqing Peng, Min Li, Yong Luo, Yi Pan: Active Protein Interaction Network and Its Application on Protein Complex Detection. BIBM 2011: 37-42

Min Li, Xuehong Wu, Jianxin Wang, Yi Pan: A New Measurement for Evaluating Clusters in Protein Interaction Networks. BIBM 2011: 63-68

Gang Chen, Jianxin Wang, Yi Pan, Jianer Chen: Identification of Breast Cancer Gene Signature in Protein Interaction Network Using Graph Centrality. BIBM 2011: 402-405

Wooyoung Kim, Min Li, Jianxin Wang, Yi Pan: Essential Protein Discovery Based on Network Motif and Gene Ontology. BIBM 2011: 470-475

Yi Pan, Hongyan Du: A Novel Prefix Graph Based Closed Frequent Itemsets Mining Algorithm. CSE 2011: 627-631

Yang Wang, Xiaojun Cao, Yi Pan: A study of the routing and spectrum allocation in spectrum-sliced Elastic Optical Path networks. INFOCOM 2011: 1503-1511

Huan Wang, Min Li, Jianxin Wang, Yi Pan: A New Method for Identifying Essential Proteins Based on Edge Clustering Coefficient. ISBRA 2011: 87-98

Jing He, Zhipeng Cai, Shouling Ji, Raheem A. Beyah, Yi Pan: A Genetic Algorithm for Constructing a Reliable MCDS in Probabilistic Wireless Networks. WASA 2011: 96-107

Fang-Xiang Wu, Mohammed Javeed Zaki, Shinichi Morishita, Yi Pan, Stephen Wong, Anastasia Christianson, Xiaohua Hu (Eds.): IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011, Atlanta, GA, USA, 12-15 November, 2011. IEEE 2011, isbn 978-1-4577-1799-4

Jeffrey Alan Greene, Lara-Jeane Costa, Jane Robertson, Yi Pan, Victor M. Deekens: Exploring relations among college students' prior knowledge, implicit theories of intelligence, and self-regulated learning in a hypermedia environment. Computers & Education 55(3): 1027-1043 (2010)

Yi Pan, Jingjing Gao, Michael Haber, Huiman X. Barnhart: Estimation of coefficients of individual agreement (CIAs) for quantitative and binary data using SAS and R. Computer Methods and Programs in Biomedicine 98(2): 214-219 (2010)

Bernard Chen, Jieyue He, Stephen Pellicer, Yi Pan: Using Hybrid Hierarchical K-means (HHK) clustering algorithm for protein sequence motif Super-Rule-Tree (SRT) structure construction. IJDMB 4(3): 316-330 (2010)

Naixue Xiong, Athanasios V. Vasilakos, Laurence Tianruo Yang, Cheng-Xiang Wang, Rajgopal Kannan, Chin-Chen Chang, Yi Pan: A novel self-tuning feedback controller for active queue management supporting TCP flows. Inf. Sci. 180(11): 2249-2263 (2010)

Ying Zheng, Yi Pan, Samuel Harris, Stephen A. Billings, Daniel Coca, Jason Berwick, Myles Jones, Aneurin J. Kennerley, David Johnston, Chris Martin, Ian M. Devonshire, John E. W. Mayhew: A dynamic model of neurovascular coupling: Implications for blood vessel dilation and constriction. NeuroImage 52(3): 1135-1147 (2010)

Ion Mandou, Giri Narasimhan, Yi Pan, Yanqing Zhang: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 7(4): 577-578 (2010)

Shi-Jinn Horng, Yuan-Hsin Chen, Ray-Shine Run, Jui-Lin Lai, Rong-Jian Chen, Wei-Chih Chen, Yi Pan, Takao Terano: A Novel Anti-collision Algorithm in RFID Systems for Identifying Passive Tags. IEEE Trans. Industrial Informatics 6(1): 105-121 (2010)

Zhiyi Huang, John H. Hine, Laurent Lefèvre, Tony McGregor, Yi Pan, Hong Shen, Zhiwei Xu: Preface. The Journal of Supercomputing 51(3): 241-243 (2010)

Naixue Xiong, Xiaohua Jia, Laurence Tianruo Yang, Athanasios V. Vasilakos, Yingshu Li, Yi Pan: A Distributed Efficient Flow Control Scheme for Multirate Multicast Networks. IEEE Trans. Parallel Distrib. Syst. 21(9): 1254-1266 (2010)

Yingshu Li, Chunyu Ai, Chinh T. Vu, Yi Pan, Raheem A. Beyah: Delay-Bounded and Energy-Efficient Composite Event Monitoring in Heterogeneous Wireless Sensor Networks. IEEE Trans. Parallel Distrib. Syst. 21(9): 1373-1385 (2010)

Naixue Xiong, Athanasios V. Vasilakos, Laurence Tianruo Yang, Yi Pan, Cheng-Xiang Wang, Art Vandenberg: Distributed Explicit Rate Schemes in Multi-Input-Multi-Output Network Systems. IEEE Transactions on Systems, Man, and Cybernetics, Part C 40(4): 448-459 (2010)

Xian Wang, Pingzhi Fan, Yi Pan: Impact of the Busy-Line Effect on the Interservice Time Distribution and Modeling of Portable Movements in PCS Networks. IEEE T. Vehicular Technology 59(2): 950-961 (2010)

Yi Pan, Mingquan Zhou, Yachun Fan, Shaode Yu: A SVM Based Relevance Feedback Algorithm for 3D Model Retrieval. APWCS 2010: 139-142

Ziqiang Zhou, Yi Pan, Lie Ma, Liguan Shen, Wei Zhao: VRML based collaborative CAM simulation environment. CSCWD 2010: 423-426

Jing He, Naixue Xiong, Yang Xiao, Yi Pan: A Reliable Energy Efficient Algorithm for Target Coverage in Wireless Sensor Networks. ICDCS Workshops 2010: 180-188

Yi Pan, Jiancang Xie, Xiaowei Si, Miao Jin: Optimal Allocation of Coupling about Water and Land Resources in the Process of Urbanization. ICEE 2010: 4244-4247

Raphaël Couturier, Yi Pan, Enrique S. Quintana-Ortí, Thomas Rauber, Gudula Rünger, Laurence Tianruo Yang: Message from the PDSEC-10 workshop chairs. IPDPS Workshops 2010: 1-2

Min Li, Jianxin Wang, Huan Wang, Yi Pan: Essential Proteins Discovery from Weighted Protein Interaction Networks. ISBRA 2010: 89-100

Naixue Xiong, Yi Pan, Xiaohua Jia, Jong Hyuk Park, Yingshu Li: Design and analysis of a self-tuning feedback controller for the Internet. Computer Networks 53(11): 1784-1797 (2009)

I-Hong Kuo, Shi-Jinn Horng, Tzong-Wann Kao, Tsung-Lieh Lin, Cheng-Ling Lee, Yi Pan: An improved method for forecasting enrollments based on fuzzy time series and particle swarm optimization. Expert Syst. Appl. 36(3): 6108-6117 (2009)

I-Hong Kuo, Shi-Jinn Horng, Tzong-Wann Kao, Tsung-Lieh Lin, Cheng-Ling Lee, Takao Terano, Yi Pan: An efficient flow-shop scheduling algorithm based on a hybrid particle swarm optimization model. Expert Syst. Appl. 36(3): 7027-7032 (2009)

Wei-Hung Lin, Yuh-Rau Wang, Shi-Jinn Horng, Tzong-Wann Kao, Yi Pan: A blind watermarking method using maximum wavelet coefficient quantization. Expert Syst. Appl. 36(9): 11509-11516 (2009)

Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan: Novel efficient granular computing models for protein sequence motifs and structure information discovery. I. J. Computational Biology and Drug Design 2(2): 168-186 (2009)

Jieyue He, Fang Zhou, Wei Zhong, Yi Pan: Gene subsets extraction based on Mutual-Information-based Minimum Spanning Trees model. I. J. Computational Biology and Drug Design 2(2): 187-203 (2009)

Reza Ghazizadeh, Pingzhi Fan, Yi Pan: A Priority Queuing Model for HCF Controlled Channel Access (HCCA) in Wireless LANs. IJCNS 2(1): 30-43 (2009)

Peter K. K. Loh, Yi Pan: An Energy-Aware Clustering Approach for Wireless Sensor Networks. IJCNS 2(2): 131-141 (2009)

Naixue Xiong, Athanasios V. Vasilakos, Laurence Tianruo Yang, Lingyang Song, Yi Pan, Rajgopal Kannan, Yingshu Li: Comparative analysis of quality of service and memory usage for adaptive failure detectors in healthcare systems. IEEE Journal on Selected Areas in Communications 27(4): 495-509 (2009)

Hua-Liang Wei, Ying Zheng, Yi Pan, Daniel Coca, Liang-Min Li, John E. W. Mayhew, Stephen A. Billings: Model Estimation of Cerebral Hemodynamics Between Blood Flow and Volume Changes: A Data-Based Modeling Approach. IEEE Trans. Biomed. Engineering 56(6): 1606-1616 (2009)

Dong Xiang, Yueli Zhang, Yi Pan: Practical Deadlock-Free Fault-Tolerant Routing in Meshes Based on the Planar Network Fault Model. IEEE Trans. Computers 58(5): 620-633 (2009)

Ion I. Mandoiu, Yi Pan, Raj Sunderraman, Alexander Zelikovsky: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 6(2): 178-179 (2009)

Deng Li, Zhigang Chen, Hui Liu, Athanasios V. Vasilakos, Yi Pan: IPBGA: a hybrid P2P based grid architecture by using information pool protocol. The Journal of Supercomputing 49(2): 159-189 (2009)

Yan-Qing Zhang, Yi Pan: Incomplete crossed hypercubes. The Journal of Supercomputing 49(3): 318-333 (2009)

Peter K. K. Loh, Yi Pan, Hsu Jing: Performance evaluation of efficient and reliable routing protocols for fixed-power sensor networks. IEEE Transactions on Wireless Communications 8(5): 2328-2335 (2009)

Jieyue He, Robert W. Harrison, Phang C. Tai, Yi Pan: Tri-Cluster-Tri-Scheme-Training: Exploiting Unlabeled Data for Transmembrane Segments Prediction. BIBE 2009: 168-175

Yi Pan, Shuming Ye, Hang Chen, Kai Jiang, Yan Sun: Development of Control System for Assisted Circulation Apparatus of Artificial Liver Support System. BMEI 2009: 1-4

Beniamino Di Martino, Christoph W. Kessler, Yi Pan, Thomas Rauber, Gudula Rünger, Laurence Tianruo Yang: Message from the PDSEC-09 workshop chairs. IPDPS 2009: 1-2

Naixue Xiong, Laurence Tianruo Yang, Yi Pan, Athanasios V. Vasilakos, Jing He: Design and analysis of an active predictive algorithm in wireless multicast networks. IPDPS 2009: 1-8

Min Li, Jianxin Wang, Jianer Chen, Yi Pan: Hierarchical Organization of Functional Modules in Weighted Protein Interaction Networks Using Clustering Coefficient. ISBRA 2009: 75-86

Qiaoliang Li, Xiaoming Wang, Yingshu Li, Yi Pan, Pingzhi Fan: Construction of Anti-Collusion Codes Based on Cover-Free Families. ITNG 2009: 362-365

Lorenzo De Carli, Yi Pan, Amit Kumar, Cristian Estan, Karthikeyan Sankaralingam: PLUG: flexible lookup modules for rapid deployment of new protocols in high-speed routers. SIGCOMM 2009: 207-218

Chao Xie, Guihai Chen, Art Vandenberg, Yi Pan: Analysis of hybrid P2P overlay network topology. Computer Communications 31(2): 190-200 (2008)

Liansheng Tan, Li Jin, Yi Pan: Efficient placement of proxies for hierarchical reliable multicast. Computer Communications 31(9): 1842-1855 (2008)

Shi-Jinn Horng, Pingzhi Fan, Yao-Ping Chou, Yen-Cheng Chang, Yi Pan: A feasible intrusion detector for recognizing IIS attacks based on neural networks. Computers & Security 27(3-4): 84-100 (2008)

Yong Li, Xiujuan Chen, Saeid Belkasim, Yi Pan: High performance bio-image database retrieval using MPI. IJBRA 4(1): 49-63 (2008)

Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan: Efficient Super Granular SVM Feature Elimination (Super GSVM-FE) model for protein sequence motif information extraction. I. J. Functional Informatics and Personalised Medicine 1(1): 8-25 (2008)

Xian Wang, Pingzhi Fan, Yi Pan: A More Realistic Thinning Scheme for Call Admission Control in Multimedia Wireless Networks. IEEE Trans. Computers 57(8): 1143-1147 (2008)

Ion I. Mandoiu, Yi Pan, Alexander Zelikovsky: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 5(3): 321-322 (2008)

Wei-Hung Lin, Shi-Jinn Horng, Tzong-Wann Kao, Pingzhi Fan, Cheng-Ling Lee, Yi Pan: An Efficient Watermarking Method Based on Significant Difference of Wavelet Coefficient Quantization. IEEE Transactions on Multimedia 10(5): 746-757 (2008)

Xian Wang, Pingzhi Fan, Jie Li, Yi Pan: Modeling and Cost Analysis of Movement-Based Location Management for PCS Networks With HLR/VLR Architecture, General Location Area and Cell Residence Time Distributions. IEEE T. Vehicular Technology 57(6): 3815-3831 (2008)

Bernard Chen, Jieyue He, Stephen Pellicer, Yi Pan: Protein Sequence Motif Super-Rule-Tree (SRT) Structure Constructed by Hybrid Hierarchical K-Means Clustering Algorithm. BIBM 2008: 98-103

Dong Xiang, Qi Wang, Yi Pan: Deadlock-Free Adaptive Routing in 2D Tori with a New Turn Model. ICA3PP 2008: 58-69

Dong Xiang, Yi Pan, Qi Wang, Zhen Chen: Deadlock-Free Fully Adaptive Routing in 2-Dimensional Tori Based on New Virtual Network Partitioning Scheme. ICDCS 2008: 454-461

Dong Xiang, Qi Wang, Yi Pan: Deadlock-Free Fully Adaptive Routing in Tori Based on a New Virtual Network Partitioning Scheme. ICPP 2008: 612-619

Yi Pan: Scientific computing on public computing platforms - practices and experiences. IPDPS 2008: 1

Tingting Zhou, Keith C. C. Chan, Yi Pan, Zhenghua Wang: An Approach for Determining Evolutionary Distance in Network-Based Phylogenetic Analysis. ISBRA 2008: 38-49

Xiaoming Wang, Qiaoliang Li, Naixue Xiong, Yi Pan: Ant Colony Optimization-Based Location-Aware Routing for Wireless Sensor Networks. WASA 2008: 109-120

Qiang Hu, Qiaoliang Li, Xiaoming Wang, Naixue Xiong, Yi Pan: An Optimal Algorithm for Minimizing Cluster Overlap of ACE. WASA 2008: 397-408

Qing Yang, Qiaoliang Li, Xiaoming Wang, Naixue Xiong, Yi Pan: A Random Key Management Scheme for Wireless Sensor Networks. WASA 2008: 480-490

Jieyue He, Hae-Jin Hu, Bernard Chen, Phang C. Tai, Robert W. Harrison, Yi Pan: Rule Extraction from SVM for Protein Structure Prediction. Rule Extraction from Support Vector Machines 2008: 227-252

Ajay K. Katangur, Somasheker Akkaladevi, Yi Pan: Analyzing the performance of optical multistage interconnection networks with limited crosstalk. Cluster Computing 10(2): 241-250 (2007)

Wei Zhong, Jieyue He, Robert W. Harrison, Phang C. Tai, Yi Pan: Clustering support vector machines for protein local structure prediction. Expert Syst. Appl. 32(2): 518-526 (2007)

Aiguo Du, Xiaohua Hu, Yi Pan: Prediction of the disulphide bridges in proteins using SVM. IJBRA 3(2): 223-233 (2007)

Jianxi Fan, Xiaola Lin, Yi Pan, Xiaohua Jia: Optimal fault-tolerant embedding of paths in twisted cubes. J. Parallel Distrib. Comput. 67(2): 205-214 (2007)

Peter Kok Keong Loh, Wen-Jing Hsu, Yi Pan: Reliable and efficient communications in sensor networks. J. Parallel Distrib. Comput. 67(8): 922-934 (2007)

Yuan-Shun Dai, Yi Pan, Xukai Zou: A Hierarchical Modeling and Analysis for Grid Service Reliability. IEEE Trans. Computers 56(5): 681-691 (2007)

Ion I. Mandoiu, Yi Pan, Alexander Zelikovsky: Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE/ACM Trans. Comput. Biology Bioinform. 4(4): 513-514 (2007)

Wei Zhong, Gulsah Altun, Xinmin Tian, Robert W. Harrison, Phang C. Tai, Yi Pan: Parallel protein secondary structure prediction schemes using Pthread and OpenMP over hyper-threading technology. The Journal of Supercomputing 41(1): 1-16 (2007)

Yi Pan: Public Computing - Challenges and Solutions. AINA 2007: 1-2

Yong Li, Xiujuan Chen, Saeid Belkasim, Yi Pan: Parallel Contour Matching and 3D Partial Retrieval in Bio-Image Database. AINA Workshops (1) 2007: 702-706

Yi Pan: Protein Structure Prediction and Its Understanding Based on Machine Learning Methods. BIBE 2007: 7

Wei Zhong, Jieyue He, Yi Pan: Multiclass Fuzzy Clustering Support Vector Machines for Protein Local Structure Prediction. BIBE 2007: 21-26

Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan: Super Granular Shrink-SVM Feature Elimination (Super GS-SVM-FE) Model for Protein Sequence Motif Information Extraction. BIBE 2007: 379-386

Ken D. Nguyen, Yi Pan: A Reliable Metric for Quantifying Multiple Sequence Alignment. BIBE 2007: 788-795

Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan: Super Granular SVM Feature Elimination (Super GSVM-FE) Model for Protein Sequence Motif Informnation Extraction. CIBCB 2007: 317-322

Hae-Jin Hu, Hao Wang, Robert W. Harrison, Phang C. Tai, Yi Pan: Understanding the Prediction of Transmembrane Proteins by Support Vector Machine using Association Rule Mining. CIBCB 2007: 418-425

Chen Wu, Xiaohua Hu, Xiajiong Shen, Xiaodan Zhang, Yi Pan: An Incremental Algorithm for Mining Default Definite Decision Rules from Incomplete Decision Tables. GrC 2007: 175-179

Yi Pan, Wei K. Tsai, Tatsuya Suda: Applying Wavelet De-noising to Improve TCP Throughput in AQM queues with Existence of Unresponsive Traffic. ICCCN 2007: 541-548

Dong Xiang, Yueli Zhang, Yi Pan, Jie Wu: Deadlock-Free Adaptive Routing in Meshes Based on Cost-Effective Deadlock Avoidance Schemes. ICPP 2007: 41

Robert J. Calin-Jageman, Chao Xie, Yi Pan, Art Vandenberg, Paul S. Katz: NEURONgrid: A Toolkit for Generating Parameter-Space Maps Using NEURON in a Grid Environment. ISBRA 2007: 182-191

Xuezheng Fu, Bernard Chen, Yi Pan, Robert W. Harrison: Statistical Estimate for the Size of the Protein Structural Vocabulary. ISBRA 2007: 530-538

Gulsah Altun, Hae-Jin Hu, Stefan Gremalschi, Robert W. Harrison, Yi Pan: A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction. ISBRA 2007: 590-600

Hung-Chuan Lai, Shi-Jinn Horng, Yong-Yuan Chen, Pingzhi Fan, Yi Pan: A New Concurrent Detection of Control Flow Errors Based on DCT Technique. PRDC 2007: 201-209

Hai Jin, Omer F. Rana, Yi Pan, Viktor K. Prasanna (Eds.): Algorithms and Architectures for Parallel Processing, 7th International Conference, ICA3PP 2007, Hangzhou, China, June 11-14, 2007, Proceedings. Lecture Notes in Computer Science 4494, Springer 2007, isbn 978-3-540-72904-4

Ling Qin, Yixin Chen, Yi Pan, Ling Chen: A novel approach to phylogenetic tree construction using stochastic optimization and clustering. BMC Bioinformatics 7(S-4) (2006)

Ling Qin, Yi Pan, Ling Chen, Yixin Chen: An improved ant colony algorithm with diversified solutions based on the immune strategy. BMC Bioinformatics 7(S-4) (2006)

Xin Jin, Yaoxue Zhang, Yi Pan, Yuezhi Zhou: ZSBT: A Novel Algorithm for Tracing DoS Attackers in MANETs. EURASIP J. Wireless Comm. and Networking 2006 (2006)

Jieyue He, Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan: Transmembrane segments prediction and understanding using support vector machine and decision tree. Expert Syst. Appl. 30(1): 64-72 (2006)

Xiannong Fu, Anu G. Bourgeois, Pingzhi Fan, Yi Pan: Using a genetic algorithm approach to solve the dynamic channel-assignment problem. IJMC 4(3): 333-353 (2006)

Yang Xiao, Chaitanya Bandela, Xiaojiang Du, Yi Pan, Edilbert Kamal Dass: Security mechanisms, attacks and security enhancements for the IEEE 802.11 WLANs. IJWMC 1(3/4): 276-288 (2006)

Hao Tian, Ajay K. Katangur, Jiling Zhong, Yi Pan: A Novel Multistage Network Architecture with Multicast and Broadcast Capability. The Journal of Supercomputing 35(3): 277-300 (2006)

Yixin Chen, Yi Pan, Juan Chen, Wei Liu, Ling Chen: Partitioned optimization algorithms for multiple sequence alignment. AINA (2) 2006: 618-622

Bernard Chen, Phang C. Tai, Robert W. Harrison, Yi Pan: FIK Model: Novel Efficient Granular Computing Model for Protein Sequence Motifs and Structure Information Discovery. BIBE 2006: 20-26

Chao Xie, Yi Pan: Analysis of Large-Scale Hybrid Peer-to-Peer Network Topology. GLOBECOM 2006

Bernard Chen, Phang C. Tai, Robert W. Harrison, Yi Pan: Novel Clustering Algorithm Combined With DSSP Post Processing For Protein Sequence Motif Discovering. GrC 2006: 449-452

Guantao Chen, Hai Deng, Yufeng Gui, Yi Pan, Xue Wang: Cysteine separations profiles on protein secondary structure infer disulfide connectivity. GrC 2006: 663-665

Gulsah Altun, Hae-Jin Hu, Dumitru Brinza, Robert W. Harrison, Alexander Zelikovsky, Yi Pan: Hybrid SVM Kernels for Protein Secondary Structure Prediction. GrC 2006: 762-765

Yixin Chen, Yi Pan, Juan Chen, Wei Liu, Ling Chen: Multiple Sequence Alignment by Ant Colony Optimization and Divide-and-Conquer. International Conference on Computational Science (2) 2006: 646-653

Jieyue He, Wei Zhong, Robert W. Harrison, Phang C. Tai, Yi Pan: Clustering Support Vector Machines and Its Application to Local Protein Tertiary Structure Prediction. International Conference on Computational Science (2) 2006: 710-717

Ling Qin, Jianli Luo, Zhimin Chen, Jing Guo, Ling Chen, Yi Pan: Phelogenetic Tree Construction using Self adaptive Ant Colony Algorithm. IMSCCS (1) 2006: 179-187

Liwen Yan, Tao Yu, Yi Pan: Realization of Intelligent Control for Roll Shape in Roll Grinder NC Machine. PROLAMAT 2006: 505-510

Chen Wu, Xiaohua Hu, Lijuan Wang, Xibei Yang, Yi Pan: Knowledge Dependency Relationships in Incomplete Information System Based on Tolerance Relations. SMC 2006: 4773-4777

Hui Liu, Yi Pan, Ivan Stojmenovic: A Pure Localized Algorithm for Finding Connected Dominating Set in MANETs by Classification of Neighbors. WASA 2006: 371-381

Yi Pan, Franz J. Rammig, Hartmut Schmeck, Mauricio Solar (Eds.): Biologically Inspired Cooperative Computing, IFIP 19th World Computer Congress, TC 10: 1st IFIP International Conference on Biologically Inspired Computing, August 21-24, 2006, Santiago, Chile. IFIP 216, Springer 2006, isbn 978-0-387-34632-8

Corrado Priami, Xiaohua Hu, Yi Pan, Tsau Young Lin (Eds.): Transactions on Computational Systems Biology V. Lecture Notes in Computer Science 4070, Springer 2006, isbn 3-540-36048-4

Yi Pan: Review: Active Services: Concepts, Architecture and Implementation. Comput. J. 48(4): 498-499 (2005)

Ajay K. Katangur, Somasheker Akkaladevi, Yi Pan, Martin D. Fraser: Routing in optical multistage networks with limited crosstalk using ant colony optimization. Int. J. Found. Comput. Sci. 16(2): 301-320 (2005)

Chunchun Ni, Hui Liu, Anu G. Bourgeois, Yi Pan: An enhanced approach to determine connected dominating sets for routing in mobile ad hoc networks. IJMC 3(3): 287-302 (2005)

Jie Li, Yi Pan, Yang Xiao: Performance study of multiple route dynamic source routing protocols for mobile ad hoc networks. J. Parallel Distrib. Comput. 65(2): 169-177 (2005)

Anu G. Bourgeois, Yi Pan, Sushil K. Prasad: Constant time fault tolerant algorithms for a linear array with a reconfigurable pipelined bus system. J. Parallel Distrib. Comput. 65(3): 374-381 (2005)

Minyi Guo, Yi Pan: Improving communication scheduling for array redistribution. J. Parallel Distrib. Comput. 65(5): 553-563 (2005)

Vijaya Smitha Kolli, Hui Liu, Jieyue He, Michelle Hong Pan, Yi Pan: Calculating Genomic Distances in Parallel Using OpenMP. T. Comp. Sys. Biology 2: 113-123 (2005)

Yang Xiao, Yi Pan: Differentiation, QoS Guarantee, and Optimization for Real-Time Traffic over One-Hop Ad Hoc Networks. IEEE Trans. Parallel Distrib. Syst. 16(6): 538-549 (2005)

Peter K. K. Loh, Wen-Jing Hsu, Yi Pan: The Exchanged Hypercube. IEEE Trans. Parallel Distrib. Syst. 16(9): 866-874 (2005)

Yang Xiao, Haizhon Li, C. L. Philip Chen, Bin Wang, Yi Pan: Proportional degradation services in wireless/mobile adaptive multimedia networks. Wireless Communications and Mobile Computing 5(2): 219-243 (2005)

Yang Xiao, Yi Pan, Kin K. Leung: Special Issue: Mobility, Paging, and Quality of Service Management for Future Wireless Networks. Wireless Communications and Mobile Computing 5: 709-711 (2005)

Yang Xiao, Kin K. Leung, Yi Pan, Xiaojiang Du: Architecture, mobility management, and quality of service for integrated 3G and WLAN networks. Wireless Communications and Mobile Computing 5: 805-823 (2005)

Yi Pan: Protein Structure Prediction and Interpretation with Support Vector Machines and Decision Trees. CIT 2005: 4

Bernard Chen, Robert W. Harrison, Yi Pan, Phang C. Tai: Novel Hybrid Hierarchical-K-means Clustering Method (H-K-means) for Microarray Analysis. CSB Workshops 2005: 105-108

Hae-Jin Hu, Phang C. Tai, Robert W. Harrison, Jieyue He, Yi Pan: Protein Secondary Structure Prediction Using Support Vector Machine With a PSSM Profile and an Advanced Tertiary Classifier. CSB Workshops 2005: 213-214

Wei Zhong, Gulsah Altun, Robert W. Harrison, Phang C. Tai, Yi Pan: Mining Protein Sequence Motifs Representing Common 3D Structures. CSB Workshops 2005: 215-216

Jieyue He, Bernard Chen, Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yisheng Dong, Yi Pan: Rule Clustering and Super-rule Generation for Transmembrane Segments Prediction. CSB Workshops 2005: 224-227

Yang Xiao, Chaitanya Bandela, Yi Pan: Vulnerabilities and security enhancements for the IEEE 802.11 WLANs. GLOBECOM 2005: 5

Yi Pan: Protein structure prediction and understanding using machine learning methods. GrC 2005: 13

Vijaya Smitha Kolli, Hui Liu, Michelle Hong Pan, Yi Pan: A Parallel Implementation for Determining Genomic Distances Under Deletion and Insertion. International Conference on Computational Science (2) 2005: 1003-1010

Xiao-hua Xu, Ling Chen, Yi Pan, Ping He: Fast Parallel Algorithms for the Longest Common Subsequence Problem Using an Optical Bus. ICCSA (3) 2005: 338-348

Stephen Pellicer, Nova Ahmed, Yi Pan, Yao Zheng: Gene Sequence Alignment on a Public Computing Platform. ICPP Workshops 2005: 95-102

Nova Ahmed, Yi Pan, Art Vandenberg, Yuzhong Sun: Parallel Algorithm for Multiple Genome Alignment on the Grid Environment. IPDPS 2005

Ajay K. Katangur, Yi Pan: Performance Analysis of Optical Multistage Interconnection Networks with Limited Crosstalk. IPDPS 2005

Stephen Pellicer, Yi Pan, P. Sun, Majeed M. Hayat: Avalanche Photodiode Gain and Impulse Response Calculation on a Public Computing Platform. IPDPS 2005

Ling Chen, Juan Chen, Yi Pan: Fast Scalable Algorithm on LARPBS for Sequence Alignment. ISPA Workshops 2005: 176-185

Jieyue He, Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yisheng Dong, Yi Pan: Understanding Protein Structure Prediction Using SVM_DT. ISPA Workshops 2005: 203-212

Jiling Zhong, Yi Pan: An Upper Bound on Blocking Probability of Vertical Stacked Optical Benes Networks. ISPA 2005: 239-251

Hui Liu, Jie Li, Yan-Qing Zhang, Yi Pan: An Adaptive Genetic Fuzzy Multi-path Routing Protocol for Wireless Ad Hoc Networks. SNPD 2005: 468-475

Yi Pan, Daoxu Chen, Minyi Guo, Jiannong Cao, Jack Dongarra (Eds.): Parallel and Distributed Processing and Applications, Third International Symposium, ISPA 2005, Nanjing, China, November 2-5, 2005, Proceedings. Lecture Notes in Computer Science 3758, Springer 2005, isbn 3-540-29769-3

Guihai Chen, Yi Pan, Minyi Guo, Jian Lu (Eds.): Parallel and Distributed Processing and Applications - ISPA 2005 Workshops, ISPA 2005 International Workshops AEPP, ASTD, BIOS, GCIC, IADS, MASN, SGCA, and WISA, Nanjing, China, November 2-5, 2005, Proceedings. Lecture Notes in Computer Science 3759, Springer 2005, isbn 3-540-29770-7

Ling Chen, Yi Pan, Yixin Chen, Xiao-hua Xu: Efficient Parallel Algorithms for Euclidean Distance Transform. Comput. J. 47(6): 694-700 (2004)

Yi Pan, Cos S. Ierotheou, Majeed M. Hayat: Parallel bandwidth characteristics calculations for thin avalanche photodiodes on a SGI Origin 2000 supercomputer. Concurrency - Practice and Experience 16(12): 1207-1225 (2004)

Yi Pan, Meejeong Lee, Jaime Bae Kim, Tatsuya Suda: An end-to-end multipath smooth handoff scheme for stream media. IEEE Journal on Selected Areas in Communications 22(4): 653-663 (2004)

Ling Chen, Hongjian Chen, Yi Pan, Yixin Chen: A Fast Efficient Parallel Hough Transform Algorithm on LARPBS. The Journal of Supercomputing 29(2): 185-195 (2004)

Yang Xiao, Yi Pan, Jie Li: Design and Analysis of Location Management for 3G Cellular Networks. IEEE Trans. Parallel Distrib. Syst. 15(4): 339-349 (2004)

Ling Chen, Yi Pan, Xiao-hua Xu: Scalable and Efficient Parallel Algorithms for Euclidean Distance Transform on the LARPBS Model. IEEE Trans. Parallel Distrib. Syst. 15(11): 975-982 (2004)

Yi Pan, Yansheng Lu: A Study on Parallel Real-Time Transaction Scheduling. CIT 2004: 701-706

Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan: Transmembrane segments prediction with support vector machine based on high performance encoding schemes. CIBCB 2004: 134-139

Wei Zhong, Gulsah Altun, Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan: Factoring tertiary classification into binary classification improves neural network for protein secondary structure prediction. CIBCB 2004: 175-181

Wei Zhong, Yi Pan, Robert W. Harrison, Phang C. Tai: Protein secondary structure prediction using different encoding schemes and neural network architectures. Data Mining and Knowledge Discovery: Theory, Tools, and Technology 2004: 74-79

Hae-Jin Hu, Yi Pan, Robert W. Harrison, Phang C. Tai: Protein secondary structure prediction using support vector machine with advanced encoding schemes. Data Mining and Knowledge Discovery: Theory, Tools, and Technology 2004: 80-87

Hai Deng, Robert W. Harrison, Yi Pan, Phang C. Tai: Alternative target functions for protein structure prediction with neural networks. Data Mining and Knowledge Discovery: Theory, Tools, and Technology 2004: 100-107

Yi Pan, Norihiro Abe, Kazuaki Tanaka, Hirokazu Taki: The Virtual Debugging System for Developing Embedded Software Using Virtual Machinery. EUC 2004: 85-95

Stephen Pellicer, Yi Pan, Minyi Guo: Distributed MD4 Password Hashing with Grid Computing Package BOINC. GCC 2004: 679-686

Nova Ahmed, Yi Pan, Art Vandenberg: Memory Efficient Pair-Wise Genome Alignment Algorithm - A Small-Scale Application with Grid Potential. GCC 2004: 777-782

Arthi Hariharan, Sushil K. Prasad, Anu G. Bourgeois, Erdogan Dogdu, Shamkant B. Navathe, Raj Sunderraman, Yi Pan: A Framework for Constraint-Based Collaborative Web Service Applications and A Travel Application Case Study. International Conference on Internet Computing 2004: 866-872

Jie Li, Yi Pan, Yang Xiao: A Dynamic HLR Location Management Scheme for PCS Networks. INFOCOM 2004

Ling Chen, Yi Pan, Xiao-hua Xu: Fast and Scalable Parallel Algorithms for Euclidean Distance Transform on LARPBS. IPDPS 2004

Ajay K. Katangur, Somasheker Akkaladevi, Yi Pan, Martin D. Fraser: Applying Ant Colony Optimization to Routing in Optical Multistage Interconnection Networks with Limited Crosstalk. IPDPS 2004

Hao Tian, Yi Pan, Ajay K. Katangur, Jiling Zhong: A Novel Modularized Optical Multistage Interconnection Network Architecture with Multicast Capability. IPDPS 2004

Hui Liu, Yi Pan, Jiannong Cao: An Improved Distributed Algorithm for Connected Dominating Sets in Wireless Ad Hoc Networks. ISPA 2004: 340-351

Sushil K. Prasad, Vijay K. Madisetti, Shamkant B. Navathe, Raj Sunderraman, Erdogan Dogdu, Anu G. Bourgeois, Michael Weeks, Bing Liu, Janaka Balasooriya, Arthi Hariharan, Wanxia Xie, Praveen Madiraju, Srilaxmi Malladi, Raghupathy Sivakumar, Alexander Zelikovsky, Yanqing Zhang, Yi Pan, Saeid Belkasim: SyD: A Middleware Testbed for Collaborative Applications over Small Heterogeneous Devices and Data Stores. Middleware 2004: 352-371

Hai Jin, Yi Pan, Nong Xiao, Jianhua Sun (Eds.): Grid and Cooperative Computing - GCC 2004: Third International Conference, Wuhan, China, October 21-24, 2004. Proceedings. Lecture Notes in Computer Science 3251, Springer 2004, isbn 3-540-23564-7

Hai Jin, Yi Pan, Nong Xiao (Eds.): Grid and Cooperative Computing - GCC 2004 Workshops: GCC 2004 International Workshops, IGKG, SGT, GISS, AAC-GEVO, and VVS, Wuhan, China, October 21-24, 2004. Proceedings. Lecture Notes in Computer Science 3252, Springer 2004, isbn 3-540-23578-7

Yi Pan, Joseph J. S. Shang, Minyi Guo: A scalable HPF implementation of a finite-volume computational electromagnetics application on a CRAY T3E parallel system. Concurrency and Computation: Practice and Experience 15(6): 607-621 (2003)

Hong Shen, Yijie Han, Yi Pan, David J. Evans: Optimal Parallel Algorithms for Multiselection on Mesh-Connected Computers. Int. J. Comput. Math. 80(2): 165-179 (2003)

Laurence Tianruo Yang, Yi Pan, Minyi Guo: Parallel and distributed scientific and engineering computing. Parallel Computing 29(11-12): 1505-1508 (2003)

Jie Li, Yi Pan, Hong Shen: More Efficient Topological Sort Using Reconfigurable Optical Buses. The Journal of Supercomputing 24(3): 251-258 (2003)

Minyi Guo, Yi Pan, Zhen Liu: Symbolic Communication Set Generation for Irregular Parallel Applications. The Journal of Supercomputing 25(3): 199-214 (2003)

Wenhao Shan, Pingzhi Fan, Yi Pan: Performance Evaluation of a Hierarchical Cellular System with Mobile Velocity-Based Bidirectional Call-Overflow Scheme. IEEE Trans. Parallel Distrib. Syst. 14(1): 72-83 (2003)

Pingzhi Z. Fan, Jie Li, Yi Pan: Coding and its applications in CDMA wireless systems. Wireless Communications and Mobile Computing 3(5): 549-551 (2003)

James P. Buckley, Jennifer Seitzer, Yongzhi Zhang, Yi Pan: Logical Identities Applied to Knowledge Discovery in Databases. FLAIRS Conference 2003: 266-270

Yang Xiao, Yi Pan, Jie Li: Movement-based location management for 3G cellular networks. GLOBECOM 2003: 4101-4105

Sushil K. Prasad, Anu G. Bourgeois, Erdogan Dogdu, Raj Sunderraman, Yi Pan, Shamkant B. Navathe, Vijay K. Madisetti: Enforcing Interdependencies and Executing Transactions Atomically over Autonomous Mobile Data Stores Using SyD Link Technology. ICDCS Workshops 2003: 803-

Ying Luo, Yi Pan, Jie Li, Yang Xiao, Xiaola Lin: A New Overflow Replacement Policy for Efficient Location Management in Mobile Networks. ICDCS Workshops 2003: 830-

Xiannong Fu, Yi Pan, Anu G. Bourgeois, Pingzhi Fan: A Three-Stage Heuristic Combined Genetic Algorithm Strategy to the Channel-Assignment Problem. IPDPS 2003: 145

Sushil K. Prasad, Anu G. Bourgeois, Erdogan Dogdu, Raj Sunderraman, Yi Pan, Shamkant B. Navathe, Vijay K. Madisetti: Implementation of a Calendar Application Based on SyD Coordination Links. IPDPS 2003: 242

Yi Pan: Computing on the Restricted LARPBS Model. ISPA 2003: 9-13

Hui Wang, Minyi Guo, Sushil K. Prasad, Yi Pan, Wenxi Chen: An Efficient Algorithm for Irregular Redistributions in Parallelizing Compilers. ISPA 2003: 76-87

Ling Chen, Yi Pan: Faster Sorting on a Linear Array with a Reconfigurable Pipelined Bus System. ISPA 2003: 209-219

Francis T. Marchese, Jude Mercado, Yi Pan: Adapting Single-User Visualization Software for Collaborative Use. IV 2003: 252-257

Jessica Yantachka, Frank W. Moore, Gregory Kramer, Michael Echler, Yi Pan: An Improved Genetic Algorithm for Multiprocessor Task Scheduling with Non-Negligible Inter-processor Communication Delay. MAICS 2003: 165-172

Yi Pan, Meejeong Lee, Jaime Bae Kim, Tatsuya Suda: An end-to-end multi-path smooth handoff scheme for stream media. WMASH 2003: 64-74

Mohammed Javeed Zaki, Yi Pan: Introduction: Recent Developments in Parallel and Distributed Data Mining. Distributed and Parallel Databases 11(2): 123-127 (2002)

Sung-Eok Jeon, Randal T. Alber, John A. Copeland, Yi Pan: Path selection with class distribution information in the integrated network. IEEE Communications Letters 6(2): 88-90 (2002)

Yijie Han, Yi Pan, Hong Shen: Sublogarithmic Deterministic Selection on Arrays with a Reconfigurable Optical Bus. IEEE Trans. Computers 51(6): 702-707 (2002)

Shi-Jinn Horng, Horng-Ren Tsai, Yi Pan, Jennifer Seitzer: Optimal Algorithms for the Channel-Assignment Problem on a Reconfigurable Array of Processors with Wider Bus Networks. IEEE Trans. Parallel Distrib. Syst. 13(11): 1124-1138 (2002)

Yi Pan, Yamin Li, Jie Li, Keqin Li, Si-Qing Zheng: Efficient parallel algorithms for distance maps of 2D binary images using an optical bus. IEEE Transactions on Systems, Man, and Cybernetics, Part A 32(2): 228-236 (2002)

Yi Pan: Teaching Parallel Programming Using Both High-Level and Low-Level Languages. International Conference on Computational Science (3) 2002: 888-897

Laurence Tianruo Yang, Yi Pan: Message from the Chairs. ICPP Workshops 2002: 233-234

Yi Pan, Cos S. Ierotheou, Majeed M. Hayat: Parallel Implementation of the Recurrence Method for Computing the Power-Spectral Density of Thin Avalanche Photodiodes. ICPP Workshops 2002: 298-305

Minyi Guo, Weng-Long Chang, Yi Pan: Optimization Techniques for Parallel Codes of Irregular Scientific Computations. ICPP Workshops 2002: 405-413

Ajay K. Katangur, Yi Pan, Martin D. Fraser: Message Routing and Scheduling in Optical Multistage Networks Using Simulated Annealing. IPDPS 2002

Yi Pan: High-Level vs Low-Level Parallel Programming for Scientific Computing. IPDPS 2002

Chin-Hsiung Wu, Shi-Jinn Horng, Yi Pan: Parallel Algorithms for Median Filtering on Arrays with Reconfigurable Optical Buses. IPDPS 2002

Meng Yu, Minyi Guo, Yi Pan, Wanyu Zang, Li Xie: JAPS-II: A Source to Source Parallelizing Compiler for Java. PDPTA 2002: 164-170

Si-Qing Zheng, Keqin Li, Yi Pan, Maria Cristina Pinotti: Generalized Coincident Pulse Technique and New Addressing Schemes for Time-Division Multiplexing Optical Buses. J. Parallel Distrib. Comput. 61(8): 1033-1051 (2001)

Xiaojun Shen, Fan Yang, Yi Pan: Equivalent permutation capabilities between time-division optical omega networks and non-optical extra-stage omega networks. IEEE/ACM Trans. Netw. 9(4): 518-524 (2001)

Yi Pan, Si-Qing Zheng, Keqin Li, Hong Shen: An Improved Generalization of Mesh-Connected Computers with Multiple Buses. IEEE Trans. Parallel Distrib. Syst. 12(3): 293-305 (2001)

Yi Pan, Jennifer Seitzer, James P. Buckley: An Embedded Architecture for Efficient Cycle Mining in Database and Knowledge Base Systems. ISCA PDCS 2001: 359-234

Jie Li, Yi Pan: Dynamic Database Management for PCS Networks. ICDCS 2001: 683-686

Yi Pan, Jie Li, Ranga Vemuri: Continous Wavelet Transform on Reconfigurable Meshes. IPDPS 2001: 114

Jie Li, Yi Pan, Xiaohua Jia: Analysis of dynamic movement-based location update scheme. SAC 2001: 368-372

Yi Pan: Teaching Parallel Programming Using Both High-Level and Low-Level Languages. CoRR cs.DC/0110058 (2001)

Jennifer Seitzer, James P. Buckley, Yi Pan: INDED: A Distributed Knowledge-Based Learning System. IEEE Intelligent Systems 15(5): 38-46 (2000)

Yuanyuan Yang, Jianchao Wang, Yi Pan: Permutation Capability of Optical Multistage Interconnection Networks. J. Parallel Distrib. Comput. 60(1): 72-91 (2000)

Jerry L. Trahan, Anu G. Bourgeois, Yi Pan, Ramachandran Vaidyanathan: Optimally Scaling Permutation Routing on Reconfigurable Linear Arrays with Optical Buses. J. Parallel Distrib. Comput. 60(9): 1125-1136 (2000)

Keqin Li, Yi Pan, Mounir Hamdi: Solving graph theory problems using reconfigurable pipelined optical buses. Parallel Computing 26(6): 723-735 (2000)

Keqin Li, Yi Pan: Probabilistic Analysis of Scheduling Precedence Constrained Parallel Tasks on Multicomputers with Contiguous Processor Allocation. IEEE Trans. Computers 49(10): 1021-1030 (2000)

Keqin Li, Yi Pan, Si-Qing Zheng: Efficient Deterministic and Probabilistic Simulations of PRAMs on Linear Arrays with Reconfigurable Pipelined Bus Systems. The Journal of Supercomputing 15(2): 163-181 (2000)

Yi Pan, Mounir Hamdi, Keqin Li: Euclidean distance transform for binary images on reconfigurable mesh-connected computers. IEEE Transactions on Systems, Man, and Cybernetics, Part B 30(1): 240-244 (2000)

Laurence Tianruo Yang, Yi Pan: Message from the Chairs. ICPP Workshops 2000: 225-

Yi Pan, Yamin Li, Jie Li, Keqin Li, Si-Qing Zheng: Computing Distance Maps Efficiently Using an Optical Bus. IPDPS Workshops 2000: 178-185

Yi Pan, Si-Qing Zheng, Keqin Li, Hong Shen: Semigroup and Prefix Computations on Improved Generalized Mesh-Connected Computers with Multiple Buses. IPDPS 2000: 251-256

Jennifer Seitzer, James P. Buckley, Yi Pan, Lee A. Adams: The Parallelization of a Knowledge Discovery System with Hypergraph Representation. IPDPS Workshops 2000: 374-381

Yi Pan: Constant-Time Hough Transform on a 3D Reconfigurable Mesh Using Fewer Processors. IPDPS Workshops 2000: 966-973

Fouad E. Kiamilev, Jeremy Ekman, Afonso Ferreira, Sadik C. Esener, Yi Pan, Keqin Li: Workshop on Optics and Computer Science (WOCS 2000). IPDPS Workshops 2000: 1042-1043

Yi Pan, Keqin Li: Constant-Time Algorithm for Computing the Euclidean Distance Maps of Binary Images on 2D Meshes with Reconfigurable Buses. Inf. Sci. 120(1-4): 209-221 (1999)

Mounir Hamdi, Chunming Qiao, Yi Pan, J. Tong: Communication-Efficient Sorting Algorithms on Reconfigurable Array of Processors With Slotted Optical Buses. J. Parallel Distrib. Comput. 57(2): 166-187 (1999)

Keqin Li, Yi Pan, Si-Qing Zheng: Parallel Matrix Computations Using a Reconfigurable Pipelined Optical Bus. J. Parallel Distrib. Comput. 59(1): 13-30 (1999)

Yi Pan: Optical Interconnections and Parallel Processing: Trends at the Interface. Scalable Computing: Practice and Experience 2(1) (1999)

Mounir Hamdi, Yi Pan, Babak Hamidzadeh, F. M. Lim: Parallel Computing on an Ethernet Cluster of Workstations: Opportunities and Constraints. The Journal of Supercomputing 13(2): 111-132 (1999)

Hong Shen, Francis Y. L. Chin, Yi Pan: Efficient Fault-Tolerant Routing in Multihop Optical WDM Networks. IEEE Trans. Parallel Distrib. Syst. 10(10): 1012-1025 (1999)

Yi Pan, Keqin Li, Mounir Hamdi: An improved constant-time algorithm for computing the Radon and Hough transforms on a reconfigurable mesh. IEEE Transactions on Systems, Man, and Cybernetics, Part A 29(4): 417-421 (1999)

Michael Bohler, Frank W. Moore, Yi Pan: Improved Multiprocessor Task Scheduling Using Genetic Algorithms. FLAIRS Conference 1999: 140-146

Xiaojun Shen, Fan Yang, Yi Pan: Equivalent permutation capabilities between time division optical omega network and non-optical extra stage omega network. IPCCC 1999: 356-362

Jerry L. Trahan, Anu G. Bourgeois, Ramachandran Vaidyanathan, Yi Pan: Optimally Scaling Permutation Routing on Reconfigurable Linear Arrays with Optical Buses. IPPS/SPDP 1999: 233-

Keqin Li, Yi Pan, Mounir Hamdi: Solving Graph Theory Problems Using Reconfigurable Pipelined Optical Buses. IPPS/SPDP Workshops 1999: 911-923

Hong Shen, Keqin Li, Yi Pan, Si-Qing Zheng: Efficient Algorithms for Fault-Tolerant Communication in Optical WDM Networks. ISPAN 1999: 119-124

José D. P. Rolim, Frank Mueller, Albert Y. Zomaya, Fikret Erçal, Stephan Olariu, Binoy Ravindran, Jan Gustafsson, Hiroaki Takada, Ronald A. Olsson, Laxmikant V. Kalé, Peter H. Beckman, Matthew Haines, Hossam A. ElGindy, Denis Caromel, Serge Chaumette, Geoffrey Fox, Yi Pan, Keqin Li, Tao Yang, G. Ghiola, Gianni Conte, Luigi V. Mancini, Dominique Méry, Beverly A. Sanders, Devesh Bhatt, Viktor K. Prasanna (Eds.): Parallel and Distributed Processing, 11 IPPS/SPDP'99 Workshops Held in Conjunction with the 13th International Parallel Processing Symposium and 10th Symposium on Parallel and Distributed Processing, San Juan, Puerto Rico, USA, April 12-16, 1999, Proceedings. Lecture Notes in Computer Science 1586, Springer 1999, isbn 3-540-65831-9

Yi Pan, Keqin Li: Linear Array with a Reconfigurable Pipelined Bus System - Concepts and Applications. Inf. Sci. 106(3-4): 237-258 (1998)

Hong Shen, Keqin Li, Yi Pan, Gilbert H. Young, Shiqing Zhang: Performing Analysis for Dynamic Tree Embedding in k-Partite Networks by a Random Walk. J. Parallel Distrib. Comput. 50(1/2): 144-156 (1998)

Keqin Li, Yi Pan, Hong Shen, Gilbert H. Young, Si-Qing Zheng: Lower Bounds for Dynamic Tree Embedding in Bipartite Networks. J. Parallel Distrib. Comput. 53(2): 119-143 (1998)

Yi Pan, Keqin Li, Si-Qing Zheng: Fast nearest Neighbor Algorithms on a Linear Array with a Reconfigurable Pipelined Bus System. Parallel Algorithms Appl. 13(1): 1-25 (1998)

Mounir Hamdi, Chunming Qiao, Yi Pan: On the Computing Power of Arrays of Processors with Optical Pipelined Buses. Parallel Processing Letters 8(4): 503-513 (1998)

George J. Klir, Yi Pan: Constrained fuzzy arithmetic: Basic questions and some answers. Soft Comput. 2(2): 100-108 (1998)

Keqin Li, Yi Pan, Si-Qing Zheng: Fast and Processor Efficient Parallel Matrix Multiplication Algorithms on a Linear Array With a Reconfigurable Pipelined Bus System. IEEE Trans. Parallel Distrib. Syst. 9(8): 705-720 (1998)

Yuanyuan Yang, Jianchao Wang, Yi Pan: Permutation Capability of Optical Multistage Interconnect Networks. IPPS/SPDP 1998: 125-133

Yi Pan, Jerry L. Trahan, Ramachandran Vaidyanathan: A Scalable and Efficient Algorithm for Computing the City Block Distance Transform on Reconfigurable Meshes. Comput. J. 40(7): 435-440 (1997)

Keqin Li, Yi Pan: On the Impact of Communication Overhead on the Average-Case Scalability of Random Parallel Programs on Multicomputers. Informatica (Slovenia) 21(2) (1997)

Mounir Hamdi, Yi Pan, Babak Hamidzadeh, F. M. Lim: Potentials and limitations of parallel computing on a cluster of workstation. ICPADS 1997: 572-577

Yi Pan, Keqin Li, Si-Qing Zheng: Fast nearest neighbor algorithms on a linear array with a reconfigurable pipelined bus system. ISPAN 1997: 444-450

Hong Shen, Keqin Li, Yi Pan, Gilbert H. Young, Si-Qing Zheng: Performance analysis for dynamic tree embedding in k-partite networks by random walk. ISPAN 1997: 451-457

Yi Pan, Mounir Hamdi, Keqin Li: Euclidean Distance Transform an Reconfigurable Meshes. PDPTA 1997: 505-512

Keqin Li, Yi Pan, Si-Qing Zheng: Simulation of Parallel Random Access Machines on Linear Arrays with Reconfigurable Pipelined Bus Systems. PDPTA 1997: 590-599

Si-Qing Zheng, Keqin Li, Yi Pan, Hong Shen, Gilbert H. Young: A Partitionability of Interconnection Networks. PDPTA 1997: 1349-1355

Keqin Li, Yi Pan, Hong Shen, Si-Qing Zheng: A Study of Average-Case Speedup and Scalability of Parallel Computations on Static Networks. PDPTA 1997: 1362-

Yi Pan, Mounir Hamdi, Gurdip Singh: Selection on k-Dimensional Meshes with Multiple Broadcasting. Comput. J. 39(2): 140-144 (1996)

Yi Pan, Mounir Hamdi: Quicksort on a Linear Array with a Reconfigurable Pipelined Bus System. ISPAN 1996: 313-319

Mounir Hamdi, Yi Pan: Communication-efficient algorithms on reconfigurable array of processors with spanning optical buses. ISPAN 1996: 440-446

Keqin Li, Yi Pan: Characterizations of Communication Overhead for Scalable Random Parallel Algorithms on Multicomputer Systems. PDPTA 1996: 474-485

Yi Pan, Keqin Li: Linear Array with a Reconfigurable Pipeline Bus System - Concepts and Applications. PDPTA 1996: 1431-1442

Mounir Hamdi, Yi Pan, Kwong Wan Tong: Efficient Image Processing Applications on the MasPAR Massively Parallel Computers. International Journal of High Speed Computing 7(4): 489-514 (1995)

Yi Pan, Mounir Hamdi: Selection on k-Dimensional Meshes with Multiple Broadcasting. PDPTA 1995: 787-794

Yi Pan: A Near-Optimal Multistage Distributed Algorithm for Finding Leaders in Clustered Chordal Rings. Inf. Sci. 76(1-2): 131-140 (1994)

Yi Pan: A More Efficient Constant Time Algorithm for Computing the Hough Transform. Parallel Processing Letters 4: 45-52 (1994)

Yi Pan, Mounir Hamdi: Computation of Singular Value Decomposition on Arrays with Pipelined Optical Buses. SAC 1993: 525-532

Yi Pan: On Efficient Distributed Elections in Clustered Chordal Rings. ICPP (2) 1992: 141-144

Yi Pan: A note on efficient parallel algorithms for the computation of two-dimensional image moments. Pattern Recognition 24(9): 917- (1991)

Yi Pan, Y. H. Chuang: Block Shift Network: A New Interconnection-Network for Efficient Parallel Computation. ICPP (1) 1991: 688-689

Yi Pan, Rami G. Melhem: Short Circuits in Buffered Multi-Stage Interconnection Networks. Comput. J. 33(4): 323-329 (1990)

Yi Pan, Henry Y. H. Chuang: Parallel Hough Transform Algorithms on SIMD Hypercube Arrays. ICPP (3) 1990: 83-86

Lan Jin, Yi Pan: A Kind of Interconnection Network with Mixed Static and Dynamic Topologies. ICDCS 1985: 160-166