Sébastien Ourselin

Jiahe Xi, Pablo Lamata, Steven Niederer, Sander Land, Wenzhe Shi, Xiahai Zhuang, Sébastien Ourselin, Simon G. Duckett, Anoop Shetty, C. Aldo Rinaldi, Daniel Rueckert, Reza Razavi, Nic Smith: The estimation of patient-specific cardiac diastolic functions from clinical measurements. Medical Image Analysis 17(2): 133-146 (2013)

Manuel Jorge Cardoso, Andrew Melbourne, Giles S. Kendall, Marc Modat, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin: AdaPT: An adaptive preterm segmentation algorithm for neonatal brain MRI. NeuroImage 65: 97-108 (2013)

Ian B. Malone, David M. Cash, Gerard R. Ridgway, David G. MacManus, Sébastien Ourselin, Nick C. Fox, Jonathan M. Schott: MIRIAD - Public release of a multiple time point Alzheimer's MR imaging dataset. NeuroImage 70: 33-36 (2013)

Max Allan, Sébastien Ourselin, Steve Thompson, David J. Hawkes, John Kelly, Danail Stoyanov: Toward Detection and Localization of Instruments in Minimally Invasive Surgery. IEEE Trans. Biomed. Engineering 60(4): 1050-1058 (2013)

Max Allan, Sébastien Ourselin, Steve Thompson, David J. Hawkes, John Kelly, Danail Stoyanov: Toward Detection and Localization of Instruments in Minimally Invasive Surgery. IEEE Trans. Biomed. Engineering 60(4): 1050-1058 (2013)

Baptiste Allain, Mingxing Hu, Laurence B. Lovat, Richard J. Cook, Tom Vercauteren, Sébastien Ourselin, David J. Hawkes: Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty. Medical Image Analysis 16(2): 482-496 (2012)

Thomy Mertzanidou, John H. Hipwell, Manuel Jorge Cardoso, Xiying Zhang, Christine Tanner, Sébastien Ourselin, Ulrich Bick, Henkjan J. Huisman, Nico Karssemeijer, David J. Hawkes: MRI to X-ray mammography registration using a volume-preserving affine transformation. Medical Image Analysis 16(5): 966-975 (2012)

Hubert M. J. Fonteijn, Marc Modat, Matthew J. Clarkson, Josephine Barnes, Manja Lehmann, Nicola Z. Hobbs, Rachael I. Scahill, Sarah J. Tabrizi, Sébastien Ourselin, Nick C. Fox, Daniel C. Alexander: An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease. NeuroImage 60(3): 1880-1889 (2012)

Pankaj Daga, Gavin Winston, Marc Modat, Mark White, Laura Mancini, Manuel Jorge Cardoso, Mark R. Symms, Jason Stretton, Andrew W. McEvoy, John S. Thornton, Caroline Micallef, Tarek Yousry, David J. Hawkes, John S. Duncan, Sébastien Ourselin: Accurate Localization of Optic Radiation During Neurosurgery in an Interventional MRI Suite. IEEE Trans. Med. Imaging 31(4): 882-891 (2012)

Wenzhe Shi, Xiahai Zhuang, Haiyan Wang, Simon G. Duckett, Duy V. N. Luong, Catalina Tobon-Gomez, Kai-Pin Tung, Philip J. Edwards, Kawal S. Rhode, Reza Razavi, Sébastien Ourselin, Daniel Rueckert: A Comprehensive Cardiac Motion Estimation Framework Using Both Untagged and 3-D Tagged MR Images Based on Nonrigid Registration. IEEE Trans. Med. Imaging 31(6): 1263-1275 (2012)

Mario Cheng, Welber Marinovic, Marcus Watson, Sébastien Ourselin, Josh Passenger, Hans de Visser, Olivier Salvado, Stephan Riek: Abdominal Palpation Haptic Device for Colonoscopy Simulation Using Pneumatic Control. IEEE T. Haptics 5(2): 97-108 (2012)

Jonathan Young, Marc Modat, Manuel Jorge Cardoso, John Ashburner, Sébastien Ourselin: Classification of Alzheimer's disease patients and controls with Gaussian processes. ISBI 2012: 1523-1526

Manuel Jorge Cardoso, Gavin Winston, Marc Modat, Shiva Keihaninejad, John S. Duncan, Sébastien Ourselin: Geodesic Shape-Based Averaging. MICCAI (3) 2012: 26-33

Andrew Melbourne, Giles S. Kendall, Manuel Jorge Cardoso, Roxanna Gunney, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin: Radial Structure in the Preterm Cortex; Persistence of the Preterm Phenotype at Term Equivalent Age? MICCAI (3) 2012: 256-263

Manuel Jorge Cardoso, Robin Wolz, Marc Modat, Nick C. Fox, Daniel Rueckert, Sébastien Ourselin: Geodesic Information Flows. MICCAI (2) 2012: 262-270

David M. Cash, Andrew Melbourne, Marc Modat, Manuel Jorge Cardoso, Matthew J. Clarkson, Nick C. Fox, Sébastien Ourselin: Cortical Folding Analysis on Patients with Alzheimer's Disease and Mild Cognitive Impairment. MICCAI (3) 2012: 289-296

Stefano Pedemonte, Manuel Jorge Cardoso, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin: Steady-State Model of the Radio-Pharmaceutical Uptake for MR-PET. MICCAI (1) 2012: 289-297

Marc Modat, Manuel Jorge Cardoso, Pankaj Daga, David M. Cash, Nick C. Fox, Sébastien Ourselin: Inverse-Consistent Symmetric Free Form Deformation. WBIR 2012: 79-88

Jon O. Cleary, Marc Modat, Francesca C. Norris, Anthony Price, Sujatha A. Jayakody, Juan Pedro Martinez-Barbera, Nicholas D. E. Greene, David J. Hawkes, Roger J. Ordidge, Peter J. Scambler, Sébastien Ourselin, Mark F. Lythgoe: Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping. NeuroImage 54(2): 769-778 (2011)

Kelvin K. Leung, Josephine Barnes, Marc Modat, Gerard R. Ridgway, Jonathan W. Bartlett, Nick C. Fox, Sébastien Ourselin: Brain MAPS: An automated, accurate and robust brain extraction technique using a template library. NeuroImage 55(3): 1091-1108 (2011)

Manuel Jorge Cardoso, Matthew J. Clarkson, Gerard R. Ridgway, Marc Modat, Nick C. Fox, Sébastien Ourselin: LoAd: A locally adaptive cortical segmentation algorithm. NeuroImage 56(3): 1386-1397 (2011)

Matthew J. Clarkson, Manuel Jorge Cardoso, Gerard R. Ridgway, Marc Modat, Kelvin K. Leung, Jonathan D. Rohrer, Nick C. Fox, Sébastien Ourselin: A comparison of voxel and surface based cortical thickness estimation methods. NeuroImage 57(3): 856-865 (2011)

Zeike A. Taylor, Stuart Crozier, Sébastien Ourselin: A Reduced Order Explicit Dynamic Finite Element Algorithm for Surgical Simulation. IEEE Trans. Med. Imaging 30(9): 1713-1721 (2011)

Xiahai Zhuang, Simon R. Arridge, David J. Hawkes, Sébastien Ourselin: A Nonrigid Registration Framework Using Spatially Encoded Mutual Information and Free-Form Deformations. IEEE Trans. Med. Imaging 30(10): 1819-1828 (2011)

Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim: Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Med. Imaging 30(11): 1901-1920 (2011)

Wenzhe Shi, Xiahai Zhuang, Haiyan Wang, Simon G. Duckett, Declan Oregan, Philip J. Edwards, Sébastien Ourselin, Daniel Rueckert: Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation. FIMH 2011: 163-170

Xiahai Zhuang, Wenzhe Shi, Simon G. Duckett, Haiyan Wang, Reza Razavi, David J. Hawkes, Daniel Rueckert, Sébastien Ourselin: A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions. FIMH 2011: 367-374

Pankaj Daga, Gavin Winston, Marc Modat, Manuel Jorge Cardoso, Mark White, Laura Mancini, Andrew W. McEvoy, John S. Thornton, Caroline Micallef, Tarek Yousry, David J. Hawkes, John S. Duncan, Sébastien Ourselin: Improved Neuronavigation through Integration of Intraoperative Anatomical and Diffusion Images in an Interventional MRI Suite. IPCAI 2011: 168-178

Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Sébastien Ourselin: On the Extraction of Topologically Correct Thickness Measurements Using Khalimsky's Cubic Complex. IPMI 2011: 159-170

Hubert M. J. Fonteijn, Matthew J. Clarkson, Marc Modat, Josephine Barnes, Manja Lehmann, Sébastien Ourselin, Nick C. Fox, Daniel C. Alexander: An Event-Based Disease Progression Model and Its Application to Familial Alzheimer's Disease. IPMI 2011: 748-759

Pankaj Daga, Gavin Winston, Marc Modat, Manuel Jorge Cardoso, Jason Stretton, Mark R. Symms, Andrew W. McEvoy, David J. Hawkes, John S. Duncan, Sébastien Ourselin: Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. ISBI 2011: 353-356

Matthew J. Clarkson, Manuel Jorge Cardoso, Marc Modat, Gerard R. Ridgway, Kelvin K. Leung, Jonathan D. Rohrer, Nick C. Fox, Sébastien Ourselin: Cross-sectional analysis using voxel or surface based cortical thickness methods: A comparison study. ISBI 2011: 381-384

Daniil Kazantsev, Alexandre Bousse, Stefano Pedemonte, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin: Edge preserving bowsher prior with nonlocal weighting for 3D spect reconstruction. ISBI 2011: 1158-1161

Lianghao Han, John H. Hipwell, Thomy Mertzanidou, Timothy J. Carter, Marc Modat, Sébastien Ourselin, David J. Hawkes: A hybrid fem-based method for aligning prone and supine images for image guided breast surgery. ISBI 2011: 1239-1242

Kelvin K. Leung, Josephine Barnes, Marc Modat, Gerard R. Ridgway, Jonathan W. Bartlett, Nick C. Fox, Sébastien Ourselin: Automated brain extraction using Multi-Atlas Propagation and Segmentation (MAPS). ISBI 2011: 2053-2056

Haiyan Wang, Wenzhe Shi, Xiahai Zhuang, Simon G. Duckett, Kai-Pin Tung, Philip J. Edwards, Reza Razavi, Sébastien Ourselin, Daniel Rueckert: Automatic Cardiac Motion Tracking Using Both Untagged and 3D Tagged MR Images. STACOM 2011: 45-54

Stefano Pedemonte, Alexandre Bousse, Brian F. Hutton, Simon R. Arridge, Sébastien Ourselin: Probabilistic Graphical Model of SPECT/MRI. MLMI 2011: 167-174

Wenzhe Shi, Xiahai Zhuang, Robin Wolz, Simon G. Duckett, Kai-Pin Tung, Haiyan Wang, Sébastien Ourselin, Philip J. Edwards, Reza Razavi, Daniel Rueckert: A Multi-image Graph Cut Approach for Cardiac Image Segmentation and Uncertainty Estimation. STACOM 2011: 178-187

Manuel Jorge Cardoso, Andrew Melbourne, Giles S. Kendall, Marc Modat, Cornelia F. Hagmann, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin: Adaptive Neonate Brain Segmentation. MICCAI (3) 2011: 378-386

Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Sébastien Ourselin: Longitudinal Cortical Thickness Estimation Using Khalimsky's Cubic Complex. MICCAI (2) 2011: 467-475

Stefano Pedemonte, Alexandre Bousse, Brian F. Hutton, Simon R. Arridge, Sébastien Ourselin: 4-D Generative Model for PET/MRI Reconstruction. MICCAI (1) 2011: 581-588

Marc Modat, Gerard R. Ridgway, Zeike A. Taylor, Manja Lehmann, Josephine Barnes, David J. Hawkes, Nick C. Fox, Sébastien Ourselin: Fast free-form deformation using graphics processing units. Computer Methods and Programs in Biomedicine 98(3): 278-284 (2010)

Hans de Visser, Josh Passenger, David Conlan, Christoph Russ, David Hellier, Mario Cheng, Oscar Acosta, Sébastien Ourselin, Olivier Salvado: Developing a Next Generation Colonoscopy Simulator. Int. J. Image Graphics 10(2): 203-217 (2010)

Jonathan D. Rohrer, Gerard R. Ridgway, Sebastian J. Crutch, Julia C. Hailstone, Johanna C. Goll, Matthew J. Clarkson, Simon Mead, Jonathan Beck, Cath Mummery, Sébastien Ourselin, Elizabeth K. Warrington, Martin Rossor, Jason D. Warren: Progressive logopenic/phonological aphasia: Erosion of the language network. NeuroImage 49(1): 984-993 (2010)

Manja Lehmann, Abdel Douiri, Lois G. Kim, Marc Modat, Dennis Chan, Sébastien Ourselin, Josephine Barnes, Nick C. Fox: Atrophy patterns in Alzheimer's disease and semantic dementia: A comparison of FreeSurfer and manual volumetric measurements. NeuroImage 49(3): 2264-2274 (2010)

Kelvin K. Leung, Matthew J. Clarkson, Jonathan W. Bartlett, Shona Clegg, Clifford R. Jack Jr., Michael W. Weiner, Nick C. Fox, Sébastien Ourselin: Robust atrophy rate measurement in Alzheimer's disease using multi-site serial MRI: Tissue-specific intensity normalization and parameter selection. NeuroImage 50(2): 516-523 (2010)

Kelvin K. Leung, Josephine Barnes, Gerard R. Ridgway, Jonathan W. Bartlett, Matthew J. Clarkson, Kate Macdonald, Norbert Schuff, Nick C. Fox, Sébastien Ourselin: Automated cross-sectional and longitudinal hippocampal volume measurement in mild cognitive impairment and Alzheimer's disease. NeuroImage 51(4): 1345-1359 (2010)

Jonathan D. Rohrer, Gerard R. Ridgway, Marc Modat, Sébastien Ourselin, Simon Mead, Nick C. Fox, Martin Rossor, Jason D. Warren: Distinct profiles of brain atrophy in frontotemporal lobar degeneration caused by progranulin and tau mutations. NeuroImage 53(3): 1070-1076 (2010)

Josephine Barnes, Gerard R. Ridgway, Jonathan W. Bartlett, Susie M. D. Henley, Manja Lehmann, Nicola Z. Hobbs, Matthew J. Clarkson, David G. MacManus, Sébastien Ourselin, Nick C. Fox: Head size, age and gender adjustment in MRI studies: a necessary nuisance? NeuroImage 53(4): 1244-1255 (2010)

Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin: Automatic Segmentation and Quantitative Analysis of the Articular Cartilages From Magnetic Resonance Images of the Knee. IEEE Trans. Med. Imaging 29(1): 55-64 (2010)

Xiahai Zhuang, Kawal S. Rhode, Reza Razavi, David J. Hawkes, Sébastien Ourselin: A Registration-Based Propagation Framework for Automatic Whole Heart Segmentation of Cardiac MRI. IEEE Trans. Med. Imaging 29(9): 1612-1625 (2010)

Marc Modat, Gerard R. Ridgway, David J. Hawkes, Nick C. Fox, Sébastien Ourselin: Nonrigid registration with differential bias correction using normalised mutual information. ISBI 2010: 356-359

Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Gerard R. Ridgway, Sébastien Ourselin: Locally weighted Markov random fields for cortical segmentation. ISBI 2010: 956-959

Xiahai Zhuang, Cheng Yao, YingLiang Ma, David J. Hawkes, Graeme P. Penney, Sébastien Ourselin: Registration-based propagation for whole heart segmentation from compounded 3D echocardiography. ISBI 2010: 1093-1096

Thomy Mertzanidou, John H. Hipwell, Manuel Jorge Cardoso, Christine Tanner, Sébastien Ourselin, David J. Hawkes: X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification. Digital Mammography / IWDM 2010: 23-30

Lianghao Han, John H. Hipwell, Zeike A. Taylor, Christine Tanner, Sébastien Ourselin, David J. Hawkes: Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method. Digital Mammography / IWDM 2010: 728-735

Guang Yang, John H. Hipwell, Matthew J. Clarkson, Christine Tanner, Thomy Mertzanidou, Spencer Gunn, Sébastien Ourselin, David J. Hawkes, Simon R. Arridge: Combined Reconstruction and Registration of Digital Breast Tomosynthesis. Digital Mammography / IWDM 2010: 760-768

Jason Dowling, Jonathan Lambert, Joel Parker, Peter B. Greer, Jurgen Fripp, James Denham, Sébastien Ourselin, Olivier Salvado: Automatic MRI Atlas-Based External Beam Radiation Therapy Treatment Planning for Prostate Cancer. Prostate Cancer Imaging 2010: 25-33

Zeike A. Taylor, Stuart Crozier, Sébastien Ourselin: Real-Time Surgical Simulation Using Reduced Order Finite Element Analysis. MICCAI (2) 2010: 388-395

Xiahai Zhuang, Kelvin K. Leung, Kawal S. Rhode, Reza Razavi, David J. Hawkes, Sébastien Ourselin: Whole Heart Segmentation of Cardiac MRI Using Multiple Path Propagation Strategy. MICCAI (1) 2010: 435-443

Holger Roth, Jamie McClelland, Marc Modat, Darren Boone, Mingxing Hu, Sébastien Ourselin, Greg G. Slabaugh, Steve Halligan, David J. Hawkes: Establishing Spatial Correspondence between the Inner Colon Surfaces from Prone and Supine CT Colonography. MICCAI (3) 2010: 497-504

Baptiste Allain, Mingxing Hu, Laurence B. Lovat, Richard J. Cook, Tom Vercauteren, Sébastien Ourselin, David J. Hawkes: A System for Biopsy Site Re-targeting with Uncertainty in Gastroenterology and Oropharyngeal Examinations. MICCAI (2) 2010: 514-521

Matthew J. Clarkson, Ian B. Malone, Marc Modat, Kelvin K. Leung, Natalie Ryan, Daniel C. Alexander, Nick C. Fox, Sébastien Ourselin: A Framework for Using Diffusion Weighted Imaging to Improve Cortical Parcellation. MICCAI (1) 2010: 534-541

Marc Modat, Zeike A. Taylor, Gerard R. Ridgway, Josephine Barnes, Edward J. Wild, David J. Hawkes, Nick C. Fox, Sébastien Ourselin: Nonlinear Elastic Spline Registration: Evaluation with Longitudinal Huntington's Disease Data. WBIR 2010: 128-139

Xiahai Zhuang, David J. Hawkes, Sébastien Ourselin: Spatial Information Encoded Mutual Information for Nonrigid Registration. WBIR 2010: 246-257

Zeike A. Taylor, Olivier Comas, Mario Cheng, Josh Passenger, David J. Hawkes, David Atkinson, Sébastien Ourselin: On modelling of anisotropic viscoelasticity for soft tissue simulation: Numerical solution and GPU execution. Medical Image Analysis 13(2): 234-244 (2009)

Oscar Acosta, Pierrick Bourgeat, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, Sébastien Ourselin: Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps. Medical Image Analysis 13(5): 730-743 (2009)

Gerard R. Ridgway, Rohani Omar, Sébastien Ourselin, Derek L. G. Hill, Jason D. Warren, Nick C. Fox: Issues with threshold masking in voxel-based morphometry of atrophied brains. NeuroImage 44(1): 99-111 (2009)

Matthew J. Clarkson, Sébastien Ourselin, Casper Nielsen, Kelvin K. Leung, Josephine Barnes, Jennifer L. Whitwell, Jeffrey L. Gunter, Derek L. G. Hill, Michael W. Weiner, Clifford R. Jack Jr., Nick C. Fox: Comparison of phantom and registration scaling corrections using the ADNI cohort. NeuroImage 47(4): 1506-1513 (2009)

Xiahai Zhuang, Kawal S. Rhode, Reza Razavi, David J. Hawkes, Sébastien Ourselin: Free-Form Deformations Using Adaptive Control Point Status for Whole Heart MR Segmentation. FIMH 2009: 303-311

Mario Cheng, Josh Passenger, Olivier Salvado, Stephan Riek, Sébastien Ourselin, Marcus Watson: Pneumatic haptic interface fuzzy controller for simulation of abdominal palpations during colonoscopy. WHC 2009: 250-255

Xiahai Zhuang, David J. Hawkes, Sébastien Ourselin: Unifying Encoding of Spatial Information in Mutual Information for Nonrigid Registration. IPMI 2009: 491-502

Jurgen Fripp, Pierrick Bourgeat, Craig Engstrom, Sébastien Ourselin, Stuart Crozier, Olivier Salvado: Automated Segmentation of the Menisci from MR Images. ISBI 2009: 510-513

Manuel Jorge Cardoso, Matthew J. Clarkson, Gerard R. Ridgway, Marc Modat, Nick C. Fox, Sébastien Ourselin: Improved Maximum a Posteriori Cortical Segmentation by Iterative Relaxation of Priors. MICCAI (1) 2009: 441-449

Baptiste Allain, Mingxing Hu, Laurence B. Lovat, Richard J. Cook, Sébastien Ourselin, David J. Hawkes: Biopsy Site Re-localisation Based on the Computation of Epipolar Lines from Two Previous Endoscopic Images. MICCAI (1) 2009: 491-498

Andreas Mang, Julia A. Schnabel, William R. Crum, Marc Modat, Oscar Camara-Rey, Christoph Palm, Gisele Brasil-Caseiras, H. Rolf Jäger, Sébastien Ourselin, Thorsten M. Buzug, David J. Hawkes: Consistency of parametric registration in serial MRI studies of brain tumor progression. Int. J. Computer Assisted Radiology and Surgery 3(3-4): 201-211 (2008)

Bhautik Joshi, Andriy Fedorov, Nikos Chrisochoides, Simon K. Warfield, Sébastien Ourselin: A quantitative assessment of approaches to mesh generation for surgical simulation. Eng. Comput. (Lond.) 24(4): 417-430 (2008)

Sébastien Ourselin, Nicholas Ayache: Editorial. Medical Image Analysis 12(5): 525-526 (2008)

Jurgen Fripp, Pierrick Bourgeat, Oscar Acosta, Parnesh Raniga, Marc Modat, Kerryn E. Pike, Gareth Jones, Graeme O'Keefe, Colin L. Masters, David Ames, Kathryn A. Ellis, Paul Maruff, Jon Currie, Victor Villemagne, Christopher Rowe, Olivier Salvado, Sébastien Ourselin: Appearance modeling of ¹¹C PiB PET images: Characterizing amyloid deposition in Alzheimer's disease, mild cognitive impairment and healthy aging. NeuroImage 43(3): 430-439 (2008)

Zeike A. Taylor, Mario Cheng, Sébastien Ourselin: High-Speed Nonlinear Finite Element Analysis for Surgical Simulation Using Graphics Processing Units. IEEE Trans. Med. Imaging 27(5): 650-663 (2008)

Valer Jurcak, Jurgen Fripp, Craig Engstrom, Duncan Walker, Olivier Salvado, Sébastien Ourselin, Stuart Crozier: Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region. ISBI 2008: 113-116

Pierrick Bourgeat, Oscar Acosta, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, Sébastien Ourselin: Improved cortical thickness measurement from MR images using partial volume estimation. ISBI 2008: 205-208

Søren G. H. Erbou, Sune Darkner, Jurgen Fripp, Sébastien Ourselin, Bjarne K. Ersbøll: Estimation of shape model parameters for 3D surfaces. ISBI 2008: 624-627

Josh Passenger, Oscar Acosta, Hans de Visser, Sebastian Bauer, Christoph Russ, Sébastien Ourselin: Texture coordinate generation of colonic surface meshes for surgical simulation. ISBI 2008: 640-643

Jurgen Fripp, Pierrick Bourgeat, Oscar Acosta, Gareth Jones, Victor Villemagne, Sébastien Ourselin, Christopher Rowe, Olivier Salvado: Generative atlases and atlas selection for C11-PIB PET-PET registration of elderly, mild cognitive impaired and Alzheimer disease patients. ISBI 2008: 1155-1158

Olivier Comas, Zeike A. Taylor, Jérémie Allard, Sébastien Ourselin, Stephane Cotin, Josh Passenger: Efficient Nonlinear FEM for Soft Tissue Modelling and Its GPU Implementation within the Open Source Framework SOFA. ISBMS 2008: 28-39

Hans de Visser, Olivier Comas, David Conlan, Sébastien Ourselin, Josh Passenger, Olivier Salvado: Deforming a High-Resolution Mesh in Real-Time by Mapping onto a Low-Resolution Physical Model. ISBMS 2008: 135-146

Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp, Erik Bonner, Sébastien Ourselin, Olivier Salvado: Automatic Delineation of Sulci and Improved Partial Volume Classification for Accurate 3D Voxel-Based Cortical Thickness Estimation from MR. MICCAI (1) 2008: 253-261

Xiahai Zhuang, Kawal S. Rhode, Simon R. Arridge, Reza Razavi, Derek L. G. Hill, David J. Hawkes, Sébastien Ourselin: An Atlas-Based Segmentation Propagation Framework Using Locally Affine Registration - Application to Automatic Whole Heart Segmentation. MICCAI (2) 2008: 425-433

Jurgen Fripp, Pierrick Bourgeat, Parnesh Raniga, Oscar Acosta, Victor Villemagne, Gareth Jones, Graeme O'Keefe, Christopher Rowe, Sébastien Ourselin, Olivier Salvado: MR-Less High Dimensional Spatial Normalization of 11C PiB PET Images on a Population of Elderly, Mild Cognitive Impaired and Alzheimer Disease Patients. MICCAI (1) 2008: 442-449

Zeike A. Taylor, Olivier Comas, Mario Cheng, Josh Passenger, David J. Hawkes, David Atkinson, Sébastien Ourselin: Modelling Anisotropic Viscoelasticity for Real-Time Soft Tissue Simulation. MICCAI (1) 2008: 703-710

Pierrick Bourgeat, Jurgen Fripp, Peter Stanwell, Saadallah Ramadan, Sébastien Ourselin: MR image segmentation of the knee bone using phase information. Medical Image Analysis 11(4): 325-335 (2007)

Olivier Salvado, Pierrick Bourgeat, Oscar Acosta Tamayo, Maria A. Zuluaga, Sébastien Ourselin: Fuzzy classificationof brain MRI using a priori knowledge: weighted fuzzy C-means. ICCV 2007: 1-8

Hoang D. K. Le, Rongxin Li, Sébastien Ourselin, John M. Potter: Itkboard: A Visual Dataflow Language for Biomedical Image Processing. ICSOFT (PL/DPS/KE/MUSE) 2007: 13-21

Jurgen Fripp, Sébastien Ourselin, Simon K. Warfield, Stuart Crozier: Automatic Segmentation of the Bones from Mr Images of The Knee. ISBI 2007: 336-339

Parnesh Raniga, Pierrick Bourgeat, Sébastien Ourselin, Victor Villemagne, Graeme O'Keefe, Christopher Rowe: Pib-Pet Segmentation for Automatic Suvr Normalisation without Mr Information. ISBI 2007: 348-351

Thanh-Mai Diep, Pierrick Bourgeat, Sébastien Ourselin: Efficient Use of Cerebral Cortical Thickness to Correct Brain Mr Segmentation. ISBI 2007: 592-595

Oscar Acosta, Hans Frimmel, Aaron Fenster, Sébastien Ourselin: Filtering and Restoration of Structures in 3d Ultrasound Images. ISBI 2007: 888-891

Bhautik Joshi, Andriy Fedorov, Nikos Chrisochoides, Simon K. Warfield, Sébastien Ourselin: Application-Driven Quantitative Assessment of Approaches to Mesh Generation. ISBI 2007: 1160-1163

Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin: Automatic Segmentation of Articular Cartilage in Magnetic Resonance Images of the Knee. MICCAI (2) 2007: 186-194

Parnesh Raniga, Pierrick Bourgeat, Victor Villemagne, Graeme O'Keefe, Christopher Rowe, Sébastien Ourselin: Spline Based Inhomogeneity Correction for ¹¹C-PIB PET Segmentation Using Expectation Maximization. MICCAI (1) 2007: 228-235

Zeike A. Taylor, Mario Cheng, Sébastien Ourselin: Real-Time Nonlinear Finite Element Analysis for Surgical Simulation Using Graphics Processing Units. MICCAI (1) 2007: 701-708

Nicholas Ayache, Sébastien Ourselin, Anthony J. Maeder (Eds.): Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I. Lecture Notes in Computer Science 4791, Springer 2007, isbn 978-3-540-75756-6

Nicholas Ayache, Sébastien Ourselin, Anthony J. Maeder (Eds.): Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part II. Lecture Notes in Computer Science 4792, Springer 2007, isbn 978-3-540-75758-0

Jurgen Fripp, Simon K. Warfield, Stuart Crozier, Sébastien Ourselin: Automatic Segmentation of the Knee Bones using 3D Active Shape Models. ICPR (1) 2006: 167-170

Rongxin Li, Sébastien Ourselin: Using marker-based deformable models for deriving anatomical models from medical image databases. ISBI 2006: 430-433

Pierrick Bourgeat, Sébastien Ourselin, Peter Stanwell, Saadallah Ramadan: Texture-based segmentation of the knee bones in MRI using phase information. ISBI 2006: 742-745

Tomaz Vrtovec, Sébastien Ourselin, Lavier Gomes, Bostjan Likar, Franjo Pernus: Generation of Curved Planar Reformations from Magnetic Resonance Images of the Spine. MICCAI (2) 2006: 135-143

Pierrick Bourgeat, Jurgen Fripp, Peter Stanwell, Saadallah Ramadan, Sébastien Ourselin: MR Image Segmentation Using Phase Information and a Novel Multiscale Scheme. MICCAI (2) 2006: 920-927

Dan C. Popescu, Bhautik Joshi, Sébastien Ourselin: Real-Time Topology Modification for Finite Element Models with Haptic Feedback. CAIP 2005: 846-853

Jurgen Fripp, Pierrick Bourgeat, Andrea J. U. Mewes, Simon K. Warfield, Stuart Crozier, Sébastien Ourselin: 3D Statistical Shape Models to Embed Spatial Relationship Information. CVBIA 2005: 51-60

Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin: Automatic Initialization of 3D Deformable Models for Cartilage Segmentation. DICTA 2005: 74

Hoang D. K. Le, Rongxin Li, Sébastien Ourselin: Towards a Visual Programming Environment Based on ITK for Medical Image Analysis. DICTA 2005: 80

Ashutosh Saxena, Gaurav Gupta, Vadim Gerasimov, Sébastien Ourselin: In Use Parameter Estimation of Inertial Sensors by Detecting Multilevel Quasi-static States. KES (4) 2005: 595-601

Pierrick Bourgeat, Jurgen Fripp, Andrew L. Janke, Graham J. Galloway, Stuart Crozier, Sébastien Ourselin: The Use of Unwrapped Phase in MR Image Segmentation: A Preliminary Study. MICCAI (2) 2005: 813-820

Bryan Lee, Dan C. Popescu, Sébastien Ourselin: Contact Modelling Based on Displacement Field Redistribution for Surgical Simulation. MIAR 2004: 337-345

Rongxin Li, Sébastien Ourselin: Accurate Curvilinear Modeling for Precise Measurements of Tubular Structures. DICTA 2003: 243-252

Bhautik Joshi, Sébastien Ourselin: BSP-Assisted Constrained Tetrahedralization. IMR 2003: 251-260

Rongxin Li, Sébastien Ourselin: Combining Front Propagation with Shape Knowledge for Accurate Curvilinear Modelling. MICCAI (2) 2003: 66-74

Changming Sun, Hugues Talbot, Sébastien Ourselin, Tony Adriaansen (Eds.): Proceedings of the Seventh International Conference on Digital Image Computing: Techniques and Applications, DICTA 2003, 10-12 December 2003, Macquarie University, Sydney, Australia. CSIRO Publishing 2003, isbn 0-643-09041-X

Sylvain Prima, Sébastien Ourselin, Nicholas Ayache: Computation of the Mid-Sagittal Plane in 3D Brain Images. IEEE Trans. Med. Imaging 21(2): 122-138 (2002)

Eric Bardinet, Sébastien Ourselin, Grégoire Malandain, D. Tandé, K. Parain, Nicholas Ayache, Jérôme Yelnik: Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections. ISBI 2002: 329-332

Sébastien Ourselin, Radu Stefanescu, Xavier Pennec: Robust Registration of Multi-modal Images: Towards Real-Time Clinical Applications. MICCAI (2) 2002: 140-147

Eric Bardinet, Sébastien Ourselin, Didier Dormont, Grégoire Malandain, D. Tandé, K. Parain, Nicholas Ayache, Jérôme Yelnik: Co-registration of Histological, Optical and MR Data of the Human Brain. MICCAI (1) 2002: 548-555

Sébastien Ourselin, Alexis Roche, Gérard Subsol, Xavier Pennec, Nicholas Ayache: Reconstructing a 3D structure from serial histological sections. Image Vision Comput. 19(1-2): 25-31 (2001)

Sébastien Ourselin, Eric Bardinet, Didier Dormont, Grégoire Malandain, Alexis Roche, Nicholas Ayache, D. Tandé, K. Parain, Jérôme Yelnik: Fusion of Histological Sections and MR Images: Towards the Construction of an Atlas of the Human Basal Ganglia. MICCAI 2001: 743-751

Eric Bardinet, Alan C. F. Colchester, Alexis Roche, Yonggen Zhu, Yang He, Sébastien Ourselin, Bill Nailon, S. A. Hojjat, James Ironside, Safa Al-Sarraj, Nicholas Ayache, Joanna M. Wardlaw: Registration of Reconstructed Post Mortem Optical Data with MR Scans of the Same Patient. MICCAI 2001: 957-965

Sylvain Prima, Sébastien Ourselin, Nicholas Ayache: Computation of the Mid-Sagittal Plane in 3D Medical Images of the Brain. ECCV (2) 2000: 685-701

Alan C. F. Colchester, Sébastien Ourselin, Yonggen Zhu, Eric Bardinet, Yang He, Alexis Roche, Safa Al-Sarraj, Bill Nailon, James Ironside, Nicholas Ayache: 3-D Reconstruction of Macroscopic Optical Brain Slice Images. MICCAI 2000: 95-105

Sébastien Ourselin, Alexis Roche, Sylvain Prima, Nicholas Ayache: Block Matching: A General Framework to Improve Robustness of Rigid Registration of Medical Images. MICCAI 2000: 557-566

Alexis Roche, Xavier Pennec, Michael Rudolph, Dorothee Auer, Grégoire Malandain, Sébastien Ourselin, Ludwig M. Auer, Nicholas Ayache: Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images. MICCAI 2000: 567-577