Victor Olman

Fengfeng Zhou, Victor Olman, Ying Xu: Large-Scale Analyses of Glycosylation in Cellulases. Genomics, Proteomics & Bioinformatics 7(4): 194-199 (2009)

Fenglou Mao, PhuongAn Dam, Jacky Chou, Victor Olman, Ying Xu: DOOR: a database for prokaryotic operons. Nucleic Acids Research 37(Database-Issue): 459-463 (2009)

Victor Olman, Fenglou Mao, Hongwei Wu, Ying Xu: Parallel Clustering Algorithm for Large Data Sets with Applications in Bioinformatics. IEEE/ACM Trans. Comput. Biology Bioinform. 6(2): 344-352 (2009)

Fengfeng Zhou, Victor Olman, Ying Xu: Barcodes for genomes and applications. BMC Bioinformatics 9 (2008)

Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu: On application of directons to functional classification of genes in prokaryotes. Computational Biology and Chemistry 32(3): 176-184 (2008)

Kyle Ellrott, Jun-tao Guo, Victor Olman, Ying Xu: Improving the Performance of protein Threading Using Insertion/Deletion Frequency Arrays. J. Bioinformatics and Computational Biology 6(3): 585-602 (2008)

Qi Liu, Victor Olman, Huiqing Liu, Xiuzi Ye, Shilun Qiu, Ying Xu: RNACluster: An integrated tool for RNA secondary structure comparison and clustering. Journal of Computational Chemistry 29(9): 1517-1526 (2008)

Guojun Li, Jizhu Lu, Victor Olman, Ying Xu: Prediction of cis-Regulatory Elements: from High-Information Content Analysis to Motif Identification. J. Bioinformatics and Computational Biology 5(4): 817-838 (2007)

Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu: An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes. ISBRA 2007: 551-563

Victor Olman, Chindo Hicks, Peng Wang, Ying Xu: Gene Expression Data Analysis in Subtypes of Ovarian Cancer Using Covariance Analysis. J. Bioinformatics and Computational Biology 4(5): 999-1014 (2006)

Zhengchang Su, Fenglou Mao, Hongwei Wu, PhuongAn Dam, Xin Chen, Tao Jiang, Victor Olman, Brian Palenik, Ying Xu: Understanding microbial genomic structures and applications to biological pathway inference. GrC 2006: 23-24

Robin Kramer, Victor Olman, Ying Xu, Dong Xu: DigitalTree: A Tool for Displaying Biological Data in Tree Structure. International Conference on Computational Science (2) 2006: 855-862

Bo Yan, Tong Zhou, Peng Wang, Zhijie Liu, Vincent A. Emanuele II, Victor Olman, Ying Xu: A Point-Process Model for Rapid Identification of Post-Translational Modifications. Pacific Symposium on Biocomputing 2006: 327-338

Bo Yan, Chongle Pan, Victor Olman, Robert L. Hettich, Ying Xu: A graph-theoretic approach for the separation of b and y ions in tandem mass spectra. Bioinformatics 21(5): 563-574 (2005)

Bo Yan, Youxing Qu, Fenglou Mao, Victor Olman, Ying Xu: PRIME: A Mass Spectrum Data Mining Tool for De Nova Sequencing and PTMs Identification. J. Comput. Sci. Technol. 20(4): 483-490 (2005)

Guojun Li, Jizhu Lu, Victor Olman, Ying Xu: PROMOCO: a New Program for Prediction of cis Regulatory Elements: From High-Information Content Analysis to Clique Identification. CSB Workshops 2005: 35-36

PhuongAn Dam, Victor Olman, Ying Xu: Improving Operon Prediction in E. coli. CSB Workshops 2005: 69-70

Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu: Accurate Prediction of Orthologous Gene Groups in Microbes. CSB 2005: 73-79

Zhengchang Su, PhuongAn Dam, Victor Olman, Ying Xu: Computational Inference of Transcription Regulation and Response Networks in Synechococcus sp. WH8102. BIBE 2004: 5-8

Bo Yan, Chongle Pan, Victor Olman, Robert L. Hettich, Ying Xu: Separation of Ion Types in Tandem Mass Spectrometry Data Interpretation - A Graph-Theoretic Approach. CSB 2004: 236-244

Victor Olman, Hanchuan Peng, Zhengchang Su, Ying Xu: Mapping of Microbial Pathways through Constrained Mapping of Orthologous Genes. CSB 2004: 363-370

PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu: In Silico Construction of the Carbon Fixation Pathway in Synechococcus sp. WH8102. CSB 2004: 614-615

Zhengchang Su, PhuongAn Dam, X. Chen, Victor Olman, Tao Jiang, Ying Xu: Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria Synechococcus sp. WH8102. CSB 2004: 640-641

Fenglou Mao, Zhengchang Su, Victor Olman, David Chuang, Ying Xu: Pathway Mapping with Operon Information: An Integer-Programming Method. CSB 2004: 642-643

Victor Olman, Jizhu Lu, PhuongAn Dam, Zhengchang Su, Ying Xu: CUBIC: Search for Binding Sites. CSB 2004: 666-667

Youxing Qu, Jun-tao Guo, Victor Olman, Ying Xu: Protein Fold Recognition Through Application of Residual Dipolar Coupling Data. Pacific Symposium on Biocomputing 2004: 459-470

Victor Olman, Dong Xu, Ying Xu: Cubic: Identification of Regulatory Binding Sites through Data Clustering. J. Bioinformatics and Computational Biology 1(1): 21-40 (2003)

Jane Razumovskaya, Victor Olman, Dong Xu, Edward C. Uberbacher, Nathan Verberkmoes, Ying Xu: A Computational Method for Assessing Peptide-Identification Reliability in Tandem Mass Spectrometry Analysis with SEQUEST. CSB 2003: 421-423

Victor Olman, Dong Xu, Ying Xu: CUBIC: Identification of Regulatory Binding Sites Through Data Clustering. CSB 2003: 448-449

Zhengchang Su, PhuongAn Dam, Xin Chen, Victor Olman, Tao Jiang, Brian Palenik, Ying Xu: Computational Inference of Regulatory Pathways in Microbes. CSB 2003: 631-633

Victor Olman, Dong Xu, Ying Xu: Identification of Regulatory Binding Sites Using Minimum Spanning Trees. Pacific Symposium on Biocomputing 2003: 327-338

Ying Xu, Victor Olman, Dong Xu: Clustering gene expression data using a graph-theoretic approach: an application of minimum spanning trees. Bioinformatics 18(4): 536-545 (2002)

Ying Xu, Victor Olman, Edward C. Uberbacher: A segmentation algorithm for noisy images: Design and evaluation. Pattern Recognition Letters 19(13): 1213-1224 (1998)