Henry C. M. Leung

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28(11): 1420-1428 (2012)

Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample. Bioinformatics 28(18): 356-362 (2012)

Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: MetaCluster 4.0: A Novel Binning Algorithm for NGS Reads and Huge Number of Species. Journal of Computational Biology 19(2): 241-249 (2012)

Junjie Yu, Henry Chi-Ming Leung, Siu-Ming Yiu, Yong Zhang, Francis Y. L. Chin, Nathan Hobbs, Amy Y. X. Wang: Phylogenetic Tree Reconstruction with Protein Linkage. ISBRA 2012: 315-327

Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang: Deterministic Polynomial-Time Algorithms for Designing Short DNA Words. CoRR abs/1201.6358 (2012)

Henry C. M. Leung, Siu-Ming Yiu, Bin Yang, Yu Peng, Yi Wang, Zhihua Liu, Jing-Chi Chen, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin: A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio. Bioinformatics 27(11): 1489-1495 (2011)

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: Meta-IDBA: a de Novo assembler for metagenomic data. Bioinformatics [ISMB/ECCB] 27(13): 94-101 (2011)

Henry Chi-Ming Leung, Shuen-Yi Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Yuk-Lun Chin: DMPFinder - Finding Differentiating Pathways with Gaps from Two Groups of Metabolic Networks. BICoB 2011: 80-85

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu: Adaptive Phenotype Testing for AND/OR Items. ISAAC 2011: 754-763

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: T-IDBA: A de novo Iterative de Bruijn Graph Assembler for Transcriptome - (Extended Abstract). RECOMB 2011: 337-338

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu: Non-adaptive Complex Group Testing with Multiple Positive Sets. TAMC 2011: 172-183

Bin Yang, Yu Peng, Henry Chi-Ming Leung, Siu-Ming Yiu, Jing-Chi Chen, Francis Yuk-Lun Chin: Unsupervised binning of environmental genomic fragments based on an error robust selection of l-mers. BMC Bioinformatics 11(S-2): 5 (2010)

Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin: MetaCluster: unsupervised binning of environmental genomic fragments and taxonomic annotation. BCB 2010: 170-179

Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin: IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler. RECOMB 2010: 426-440

Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang: Deterministic Polynomial-Time Algorithms for Designing Short DNA Words. TAMC 2010: 308-319

Francis Y. L. Chin, Henry C. M. Leung, Wei-Lin Li, Siu-Ming Yiu: Finding optimal threshold for correction error reads in DNA assembling. BMC Bioinformatics 10(S-1) (2009)

Henry Chi-Ming Leung, Man-Hung Siu, Siu-Ming Yiu, Francis Yuk-Lun Chin, Ken Wing-Kin Sung: Clustering-Based Approach for Predicting Motif Pairs from protein Interaction Data. J. Bioinformatics and Computational Biology 7(4): 701-716 (2009)

Henry C. M. Leung, Qian Xiang, Siu-Ming Yiu, Francis Y. L. Chin: Predicting Protein Complexes from PPI Data: A Core-Attachment Approach. Journal of Computational Biology 16(2): 133-144 (2009)

Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Jing-Chi Chen, Francis Y. L. Chin: Unsupervised binning of environmental genomic fragments based on an error robust selection of l-mers. DTMBIO 2009: 3-10

Francis Y. L. Chin, Henry C. M. Leung: DNA Motif Representation with Nucleotide Dependency. IEEE/ACM Trans. Comput. Biology Bioinform. 5(1): 110-119 (2008)

Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Siu, Siu-Ming Yiu: Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency. APBC 2008: 343-352

Henry C. M. Leung, Francis Y. L. Chin, Bethany Man-Yee Chan: Discovering Motifs With Transcription Factor Domain Knowledge. Pacific Symposium on Biocomputing 2007: 472-483

Francis Y. L. Chin, Henry C. M. Leung, Wing-Kin Sung, Siu-Ming Yiu: The Point Placement Problem on a Line - Improved Bounds for Pairwise Distance Queries. WABI 2007: 372-382

Henry C. M. Leung, Francis Y. L. Chin: Finding motifs from all sequences with and without binding sites. Bioinformatics 22(18): 2217-2223 (2006)

Henry C. M. Leung, Francis Y. L. Chin: An efficient motif discovery algorithm with unknown motif length and number of binding sites. IJDMB 1(2): 201-215 (2006)

Henry C. M. Leung, Francis Y. L. Chin: Algorithms for Challenging Motif Problems. J. Bioinformatics and Computational Biology 4(1): 43-58 (2006)

Francis Y. L. Chin, Henry C. M. Leung: An Efficient Algorithm for String Motif Discovery. APBC 2006: 79-88

Henry C. M. Leung, Francis Y. L. Chin: Discovering DNA Motifs with Nucleotide Dependency. BIBE 2006: 70-80

Henry C. M. Leung, Francis Y. L. Chin, Siu-Ming Yiu, Ronald Rosenfeld, Wai Wan Tsang: Finding Motifs with Insufficient Number of Strong Binding Sites. Journal of Computational Biology 12(6): 686-701 (2005)

Francis Y. L. Chin, Henry C. M. Leung: Voting algorithms for discovering long motifs. APBC 2005: 261-271

Henry C. M. Leung, Francis Y. L. Chin: An Efficient Algorithm for the Extended (l, d)-Motif Problem with Unknown Number of Binding Sites. BIBE 2005: 11-18

Henry C. M. Leung, Francis Y. L. Chin: Finding exact optimal motifs in matrix representation by partitioning. ECCB/JBI 2005: 92

Henry C. M. Leung, Francis Y. L. Chin: Generalized Planted (l, d)-Motif Problem with Negative Set. WABI 2005: 264-275

Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu, Tak Wah Lam, Roni Rosenfeld, Wai Wan Tsang, David K. Smith, Y. Jiang: Finding motifs for insufficient number of sequences with strong binding to transcription facto. RECOMB 2004: 125-132