Peter Huggins

David C. Haws, Peter Huggins, Eric M. O'Neill, David W. Weisrock, Ruriko Yoshida: A support vector machine based test for incongruence between sets of trees in tree space. BMC Bioinformatics 13: 210 (2012)

Peter Huggins, Shan Zhong, Idit Shiff, Rachel Beckerman, Oleg Laptenko, Carol Prives, Marcel H. Schulz, Itamar Simon, Ziv Bar-Joseph: DECOD: fast and accurate discriminative DNA motif finding. Bioinformatics 27(17): 2361-2367 (2011)

Yong Lu, Peter Huggins, Ziv Bar-Joseph: Cross species analysis of microarray expression data. Bioinformatics 25(12): 1476-1483 (2009)

Peter Huggins, Wenbin Li, David Haws, Thomas Friedrich, Jinze Liu, Ruriko Yoshida: Bayes estimators for phylogenetic reconstruction. CoRR abs/0911.0645 (2009)

Kord Eickmeyer, Peter Huggins, Lior Pachter, Ruriko Yoshida: On the optimality of the neighbor-joining algorithm. Algorithms for Molecular Biology 3 (2008)

Peter Huggins, Bernd Sturmfels, Josephine Yu, Debbie S. Yuster: The hyperdeterminant and triangulations of the 4-cube. Math. Comput. 77(263): 1653-1679 (2008)

Colin N. Dewey, Peter Huggins, Kevin Woods, Bernd Sturmfels, Lior Pachter: Parametric Alignment of Drosophila Genomes. PLoS Computational Biology 2(6) (2006)

Peter Huggins: iB4e: A Software Framework for Parametrizing Specialized LP Problems. ICMS 2006: 245-247

Jesús A. De Loera, David Haws, Raymond Hemmecke, Peter Huggins, Ruriko Yoshida: A computational study of integer programming algorithms based on Barvinok's rational functions. Discrete Optimization 2(2): 135-144 (2005)

Jesús A. De Loera, David Haws, Raymond Hemmecke, Peter Huggins, Bernd Sturmfels, Ruriko Yoshida: Short rational functions for toric algebra and applications. J. Symb. Comput. 38(2): 959-973 (2004)

Jesús A. De Loera, David Haws, Raymond Hemmecke, Peter Huggins, Ruriko Yoshida: Three Kinds of Integer Programming Algorithms Based on Barvinok's Rational Functions. IPCO 2004: 244-255