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Colin N. Dewey

2010 – today

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2011
[j8]
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  - journals/bib/Dewey11
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Colin N. Dewey: Positional orthology: putting genomic evolutionary relationships into context. Briefings in Bioinformatics 12(5): 401-412 (2011)
[j7]
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  - journals/bmcbi/LiD11
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Bo Li, Colin N. Dewey: RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinformatics 12: 323 (2011)
[j6]
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  - journals/ploscb/ChungKLSLBDK11
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Dongjun Chung, Pei Fen Kuan, Bo Li, Rajendran Sanalkumar, Kun Liang, Emery H. Bresnick, Colin N. Dewey, Sündüz Keles: Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes with Multi-Read Analysis of ChIP-Seq Data. PLoS Computational Biology 7(7) (2011)
[j5]
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  - journals/tvcg/AlbersDG11
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Danielle Albers, Colin N. Dewey, Michael Gleicher: Sequence Surveyor: Leveraging Overview for Scalable Genomic Alignment Visualization. IEEE Trans. Vis. Comput. Graph. 17(12): 2392-2401 (2011)
2010
[j4]
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  dblp key:
  - journals/bioinformatics/LiRSTD10
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Bo Li, Victor Ruotti, Ron M. Stewart, James A. Thomson, Colin N. Dewey: RNA-Seq gene expression estimation with read mapping uncertainty. Bioinformatics 26(4): 493-500 (2010)
[j3]
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  - journals/bioinformatics/LargetKDA10
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Bret R. Larget, Satish K. Kotha, Colin N. Dewey, Cécile Ané: BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis. Bioinformatics 26(22): 2910-2911 (2010)

2000 – 2009

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2009
[j2]
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  - journals/ploscb/BradleyRSJDDHP09
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Robert K. Bradley, Adam Roberts, Michael Smoot, Sudeep Juvekar, Jaeyoung Do, Colin N. Dewey, Ian Holmes, Lior Pachter: Fast Statistical Alignment. PLoS Computational Biology 5(5) (2009)
[c1]
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  - conf/gensips/AroraDS09
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Raman Arora, Colin N. Dewey, William A. Sethares: Reconstructing latent periods in genome sequences with insertions and deletions. GENSiPS 2009: 1-4
2006
[j1]
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  - journals/ploscb/DeweyHWSP06
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Colin N. Dewey, Peter Huggins, Kevin Woods, Bernd Sturmfels, Lior Pachter: Parametric Alignment of Drosophila Genomes. PLoS Computational Biology 2(6) (2006)