Please note: This is a beta version of the new dblp website.
You can find the classic dblp view of this page here.
You can find the classic dblp view of this page here.
Ümit V. Çatalyürek
2010 – today
- 2013
[j42]Kemal Eren, Mehmet Deveci, Onur Küçüktunç, Ümit V. Çatalyürek: A comparative analysis of biclustering algorithms for gene expression data. Briefings in Bioinformatics 14(3): 279-292 (2013)- [j41]Ayat Hatem, Doruk Bozdag, Amanda E. Toland, Ümit V. Çatalyürek: Benchmarking short sequence mapping tools. BMC Bioinformatics 14: 184 (2013)
- [j40]Anne Benoit, Ümit V. Çatalyürek, Yves Robert, Erik Saule: A survey of pipelined workflow scheduling: Models and algorithms. ACM Comput. Surv. 45(4): 50 (2013)
- [j39]Ahmet Erdem Sariyüce, Bugra Gedik, Gabriela Jacques-Silva, Kun-Lung Wu, Ümit V. Çatalyürek: Streaming Algorithms for k-core Decomposition. PVLDB 6(6): 433-444 (2013)
- [c104]Mehmet Deveci, Kamer Kaya, Bora Uçar, Ümit V. Çatalyürek: GPU Accelerated Maximum Cardinality Matching Algorithms for Bipartite Graphs. Euro-Par 2013: 850-861
- [c103]Onur Küçüktunç, Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: TheAdvisor: a webservice for academic recommendation. JCDL 2013: 433-434
- [c102]Ümit V. Çatalyürek, Kamer Kaya, Ahmet Erdem Sariyüce, Erik Saule: Shattering and Compressing Networks for Betweenness Centrality. SDM 2013: 686-694
- [c101]Onur Küçüktunç, Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: Diversified recommendation on graphs: pitfalls, measures, and algorithms. WWW 2013: 715-726
- [i9]Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: Performance Evaluation of Sparse Matrix Multiplication Kernels on Intel Xeon Phi. CoRR abs/1302.1078 (2013)
- [i8]Ahmet Erdem Sariyüce, Kamer Kaya, Erik Saule, Ümit V. Çatalyürek: Incremental Algorithms for Network Management and Analysis based on Closeness Centrality. CoRR abs/1303.0422 (2013)
- [i7]Mehmet Deveci, Kamer Kaya, Bora Uçar, Ümit V. Çatalyürek: GPU accelerated maximum cardinality matching algorithms for bipartite graphs. CoRR abs/1303.1379 (2013)
- 2012
- [j38]George Teodoro, Timothy D. R. Hartley, Ümit V. Çatalyürek, Renato Ferreira: Optimizing dataflow applications on heterogeneous environments. Cluster Computing 15(2): 125-144 (2012)
- [j37]Francisco D. Igual, Rafael Mayo, Timothy D. R. Hartley, Ümit V. Çatalyürek, Antonio Ruiz, Manuel Ujaldon: Color and texture analysis on emerging parallel architectures. IJHPCA 26(3): 237-259 (2012)
- [j36]Erik Saule, Doruk Bozdag, Ümit V. Çatalyürek: Optimizing the stretch of independent tasks on a cluster: From sequential tasks to moldable tasks. J. Parallel Distrib. Comput. 72(4): 489-503 (2012)
- [j35]Erik Saule, Erdeniz Ö. Bas, Ümit V. Çatalyürek: Load-balancing spatially located computations using rectangular partitions. J. Parallel Distrib. Comput. 72(10): 1201-1214 (2012)
- [j34]Timothy D. R. Hartley, Erik Saule, Ümit V. Çatalyürek: Improving performance of adaptive component-based dataflow middleware. Parallel Computing 38(6-7): 289-309 (2012)
- [j33]Ümit V. Çatalyürek, John Feo, Assefaw Hadish Gebremedhin, Mahantesh Halappanavar, Alex Pothen: Graph coloring algorithms for multi-core and massively multithreaded architectures. Parallel Computing 38(10-11): 576-594 (2012)
- [j32]Enver Kayaaslan, Ali Pinar, Ümit V. Çatalyürek, Cevdet Aykanat: Partitioning Hypergraphs in Scientific Computing Applications through Vertex Separators on Graphs. SIAM J. Scientific Computing 34(2) (2012)
- [j31]Erik G. Boman, Ümit V. Çatalyürek, Cédric Chevalier, Karen D. Devine: The Zoltan and Isorropia parallel toolkits for combinatorial scientific computing: Partitioning, ordering and coloring. Scientific Programming 20(2): 129-150 (2012)
- [c100]Onur Kucuktunc, Kamer Kaya, Erik Saule, Ümit V. Çatalyürek: Fast Recommendation on Bibliographic Networks. ASONAM 2012: 480-487
- [c99]Ayat Hatem, Kamer Kaya, Ümit V. Çatalyürek: Microarray vs. RNA-Seq: a comparison for active subnetwork discovery. BCB 2012: 450-457
- [c98]Zheng Zhou, Erik Saule, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary, Ümit V. Çatalyürek: An Out-of-Core Eigensolver on SSD-equipped Clusters. CLUSTER 2012: 248-256
- [c97]Ümit V. Çatalyürek, Mehmet Deveci, Kamer Kaya, Bora Uçar: UMPa: A multi-objective, multi-level partitioner for communication minimization. Graph Partitioning and Graph Clustering 2012: 53-66
- [c96]Ümit V. Çatalyürek, Kamer Kaya, Johannes Langguth, Bora Uçar: A partitioning-based divisive clustering technique for maximizing the modularity. Graph Partitioning and Graph Clustering 2012: 171-186
- [c95]Ümit V. Çatalyürek, Kamer Kaya, Bora Uçar: On Shared-Memory Parallelization of a Sparse Matrix Scaling Algorithm. ICPP 2012: 68-77
- [c94]Zheng Zhou, Erik Saule, Hasan Metin Aktulga, Chao Yang, Esmond G. Ng, Pieter Maris, James P. Vary, Ümit V. Çatalyürek: An Out-of-Core Dataflow Middleware to Reduce the Cost of Large Scale Iterative Solvers. ICPP Workshops 2012: 71-80
- [c93]Ümit V. Çatalyürek, Mehmet Deveci, Kamer Kaya, Bora Uçar: Multithreaded Clustering for Multi-level Hypergraph Partitioning. IPDPS 2012: 848-859
- [c92]Erik Saule, Ümit V. Çatalyürek: An Early Evaluation of the Scalability of Graph Algorithms on the Intel MIC Architecture. IPDPS Workshops 2012: 1629-1639
- [c91]Ahmet Erdem Sariyüce, Erik Saule, Ümit V. Çatalyürek: Scalable Hybrid Implementation of Graph Coloring Using MPI and OpenMP. IPDPS Workshops 2012: 1744-1753
- [i6]Onur Küçüktunç, Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: Recommendation on Academic Networks using Direction Aware Citation Analysis. CoRR abs/1205.1143 (2012)
- [i5]Ümit V. Çatalyürek, John Feo, Assefaw Hadish Gebremedhin, Mahantesh Halappanavar, Alex Pothen: Graph Coloring Algorithms for Muti-core and Massively Multithreaded Architectures. CoRR abs/1205.3809 (2012)
- [i4]Onur Küçüktunç, Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: Diversifying Citation Recommendations. CoRR abs/1209.5809 (2012)
- [i3]Ahmet Erdem Sariyüce, Erik Saule, Kamer Kaya, Ümit V. Çatalyürek: Shattering and Compressing Networks for Centrality Analysis. CoRR abs/1209.6007 (2012)
- 2011
- [j30]Francisco D. Igual, Rafael Mayo, Timothy D. R. Hartley, Ümit V. Çatalyürek, Antonio Ruiz, Manuel Ujaldon: Color and texture analysis using emerging parallel architectures. IJHPCA 25(4): 404-427 (2011)
- [j29]Naga Vydyanathan, Ümit V. Çatalyürek, Tahsin M. Kurç, Ponnuswamy Sadayappan, Joel H. Saltz: Optimizing latency and throughput of application workflows on clusters. Parallel Computing 37(10-11): 694-712 (2011)
- [j28]Ümit V. Çatalyürek, Cevdet Aykanat, Enver Kayaaslan: Hypergraph Partitioning-Based Fill-Reducing Ordering for Symmetric Matrices. SIAM J. Scientific Computing 33(4): 1996-2023 (2011)
- [c90]Ayat Hatem, Doruk Bozdag, Ümit V. Çatalyürek: Benchmarking Short Sequence Mapping Tools. BIBM 2011: 109-113
- [c89]Hasan Metin Aktulga, Chao Yang, Ümit V. Çatalyürek, Pieter Maris, James P. Vary, Esmond G. Ng: On Reducing I/O Overheads in Large-Scale Invariant Subspace Projections. Euro-Par Workshops (1) 2011: 305-314
- [c88]Ahmet Erdem Sariyüce, Erik Saule, Ümit V. Çatalyürek: Improving graph coloring on distributed-memory parallel computers. HiPC 2011: 1-10
- [c87]Lee A. D. Cooper, Joel H. Saltz, Ümit V. Çatalyürek, Kun Huang: Acceleration of Two Point Correlation Function Calculation for Pathology Image Segmentation. HISB 2011: 174-181
- [c86]Erik Saule, Erdeniz Ö. Bas, Ümit V. Çatalyürek: Partitioning Spatially Located Computations Using Rectangles. IPDPS 2011: 709-720
- [c85]Ümit V. Çatalyürek, Florin Dobrian, Assefaw Hadish Gebremedhin, Mahantesh Halappanavar, Alex Pothen: Distributed-Memory Parallel Algorithms for Matching and Coloring. IPDPS Workshops 2011: 1971-1980
- [e2]Srinivas Aluru, Sanghamitra Bandyopadhyay, Ümit V. Çatalyürek, Devdatt P. Dubhashi, Phillip H. Jones, Manish Parashar, Bertil Schmidt (Eds.): Contemporary Computing - 4th International Conference, IC3 2011, Noida, India, August 8-10, 2011. Proceedings. Communications in Computer and Information Science 168, Springer 2011, ISBN 978-3-642-22605-2
- [r2]Ümit V. Çatalyürek, Bora Uçar, Cevdet Aykanat: Hypergraph Partitioning. Encyclopedia of Parallel Computing 2011: 871-881
- [r1]Ümit V. Çatalyürek, Cevdet Aykanat: PaToH (Partitioning Tool for Hypergraphs). Encyclopedia of Parallel Computing 2011: 1479-1487
- [i2]Enver Kayaaslan, Ali Pinar, Ümit V. Çatalyürek, Cevdet Aykanat: Hypergraph Partitioning through Vertex Separators on Graphs. CoRR abs/1103.0106 (2011)
- [i1]Erik Saule, Erdeniz Ö. Bas, Ümit V. Çatalyürek: Load-Balancing Spatially Located Computations using Rectangular Partitions. CoRR abs/1104.2566 (2011)
- 2010
- [j27]Bora Uçar, Ümit V. Çatalyürek, Cevdet Aykanat: A Matrix Partitioning Interface to PaToH in MATLAB. Parallel Computing 36(5-6): 254-272 (2010)
- [j26]Ümit V. Çatalyürek, Benjamin Rutt, Kyle Metzroth, Aram Hakobyan, Tunc Aldemir, Richard Denning, Sean Dunagan, David Kunsman: Development of a code-agnostic computational infrastructure for the dynamic generation of accident progression event trees. Rel. Eng. & Sys. Safety 95(3): 278-294 (2010)
- [j25]Ümit V. Çatalyürek, Cevdet Aykanat, Bora Uçar: On Two-Dimensional Sparse Matrix Partitioning: Models, Methods, and a Recipe. SIAM J. Scientific Computing 32(2): 656-683 (2010)
- [c84]Doruk Bozdag, Ashwin S. Kumar, Ümit V. Çatalyürek: Comparative analysis of biclustering algorithms. BCB 2010: 265-274
- [c83]Timothy D. R. Hartley, Erik Saule, Ümit V. Çatalyürek: Automatic dataflow application tuning for heterogeneous systems. HiPC 2010: 1-10
- [c82]George Teodoro, Timothy D. R. Hartley, Ümit V. Çatalyürek, Renato Ferreira: Run-time optimizations for replicated dataflows on heterogeneous environments. HPDC 2010: 13-24
- [c81]Olcay Sertel, Ümit V. Çatalyürek, Gerard Lozanski, Arwa Shanaah, Metin N. Gurcan: An Image Analysis Approach for Detecting Malignant Cells in Digitized H&E-stained Histology Images of Follicular Lymphoma. ICPR 2010: 273-276
- [c80]Doruk Bozdag, Ayat Hatem, Ümit V. Çatalyürek: Exploring parallelism in short sequence mapping using Burrows-Wheeler Transform. IPDPS Workshops 2010: 1-8
- [c79]
- [c78]Erik Saule, Doruk Bozdag, Ümit V. Çatalyürek: A Moldable Online Scheduling Algorithm and Its Application to Parallel Short Sequence Mapping. JSSPP 2010: 93-109
- [c77]
- [e1]Tiffany C. Veinot, Ümit V. Çatalyürek, Gang Luo, Henrique Andrade, Neil R. Smalheiser (Eds.): ACM International Health Informatics Symposium, IHI 2010, Arlington, VA, USA, November 11 - 12, 2010, Proceedings. ACM 2010, ISBN 978-1-4503-0030-8
2000 – 2009
- 2009
- [j24]Antonio Ruiz, Olcay Sertel, Manuel Ujaldon, Ümit V. Çatalyürek, Joel H. Saltz, Metin N. Gurcan: Stroma classification for neuroblastoma on graphics processors. IJDMB 3(3): 280-298 (2009)
- [j23]Selnur Erdal, Ümit V. Çatalyürek, Philip R. O. Payne, Joel H. Saltz, Jyoti Kamal, Metin N. Gurcan: A Knowledge-Anchored Integrative Image Search and Retrieval System. J. Digital Imaging 22(2): 166-182 (2009)
- [j22]Ümit V. Çatalyürek, Erik G. Boman, Karen D. Devine, Doruk Bozdag, Robert T. Heaphy, Lee Ann Riesen: A repartitioning hypergraph model for dynamic load balancing. J. Parallel Distrib. Comput. 69(8): 711-724 (2009)
- [j21]Olcay Sertel, Jun Kong, Hiroyuki Shimada, Ümit V. Çatalyürek, Joel H. Saltz, Metin N. Gurcan: Computer-aided prognosis of neuroblastoma on whole-slide images: Classification of stromal development. Pattern Recognition 42(6): 1093-1103 (2009)
- [j20]Doruk Bozdag, Füsun Özgüner, Ümit V. Çatalyürek: Compaction of Schedules and a Two-Stage Approach for Duplication-Based DAG Scheduling. IEEE Trans. Parallel Distrib. Syst. 20(6): 857-871 (2009)
- [j19]Nagavijayalakshmi Vydyanathan, Sriram Krishnamoorthy, Gerald M. Sabin, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: An Integrated Approach to Locality-Conscious Processor Allocation and Scheduling of Mixed-Parallel Applications. IEEE Trans. Parallel Distrib. Syst. 20(8): 1158-1172 (2009)
- [j18]Olcay Sertel, Jun Kong, Ümit V. Çatalyürek, Gerard Lozanski, Joel H. Saltz, Metin N. Gurcan: Histopathological Image Analysis Using Model-Based Intermediate Representations and Color Texture: Follicular Lymphoma Grading. Signal Processing Systems 55(1-3): 169-183 (2009)
- [c76]Doruk Bozdag, Jeffrey D. Parvin, Ümit V. Çatalyürek: A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets. BICoB 2009: 151-163
- [c75]Hatice Gulcin Ozer, Doruk Bozdag, Terry Camerlengo, Jiejun Wu, Yi-Wen Huang, Timothy D. R. Hartley, Jeffrey D. Parvin, Tim Hui-Ming Huang, Ümit V. Çatalyürek, Kun Huang: A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. BICoB 2009: 320-330
- [c74]Timothy D. R. Hartley, Ahmed Fasih, Charles A. Berdanier, Füsun Özgüner, Ümit V. Çatalyürek: Investigating the use of GPU-accelerated nodes for SAR image formation. CLUSTER 2009: 1-8
- [c73]George Teodoro, Rafael Sachetto Oliveira, Olcay Sertel, Metin N. Gurcan, Wagner Meira Jr., Ümit V. Çatalyürek, Renato Ferreira: Coordinating the use of GPU and CPU for improving performance of compute intensive applications. CLUSTER 2009: 1-10
- [c72]Manuel Ujaldon, Ümit V. Çatalyürek: High-performance signal processing on emerging many-core architectures using cuda. ICME 2009: 1825-1828
- [c71]Doruk Bozdag, Catalin C. Barbacioru, Ümit V. Çatalyürek: Parallel short sequence mapping for high throughput genome sequencing. IPDPS 2009: 1-10
- [c70]Timothy D. R. Hartley, Ümit V. Çatalyürek: A component-based framework for the Cell Broadband Engine. IPDPS 2009: 1-14
- [c69]Francisco D. Igual, Rafael Mayo, Timothy D. R. Hartley, Ümit V. Çatalyürek, Antonio Ruiz, Manuel Ujaldon: Exploring the GPU for Enhancing Parallelism on Color and Texture Analysis. PARCO 2009: 299-306
- [c68]Sivaramakrishnan Narayanan, Ümit V. Çatalyürek, Tahsin M. Kurç, Joel H. Saltz: Parallel materialization of large ABoxes. SAC 2009: 1257-1261
- 2008
- [j17]Joel H. Saltz, Tahsin M. Kurç, Shannon Hastings, Stephen Langella, Scott Oster, David Ervin, Ashish Sharma, Tony Pan, Metin N. Gurcan, Justin Permar, Renato Ferreira, Philip R. O. Payne, Ümit V. Çatalyürek, Enrico Caserta, Gustavo Leone, Michael C. Ostrowski, Ravi K. Madduri, Ian T. Foster, Subhasree Madhavan, Kenneth H. Buetow, Krishnakant Shanbhag, Eliot L. Siegel: e-Science, caGrid, and Translational Biomedical Research. IEEE Computer 41(11): 58-66 (2008)
- [j16]Bronis R. de Supinski, Martin Schulz, Vasily Bulatov, William H. Cabot, Bor Chan, Andrew W. Cook, Erik W. Draeger, James N. Glosli, Jeffrey A. Greenough, Keith W. Henderson, Alison Kubota, Steve Louis, Brian J. Miller, Mehul V. Patel, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Andy Yoo, George Almási, Gyan Bhanot, Alan Gara, John A. Gunnels, Manish Gupta, José E. Moreira, James C. Sexton, Robert Walkup, Charles Archer, François Gygi, Timothy C. Germann, Kai Kadau, Peter S. Lomdahl, Charles A. Rendleman, Michael L. Welcome, William McLendon, Bruce Hendrickson, Franz Franchetti, Stefan Kral, Juergen Lorenz, Christoph W. Überhuber, Edmond Chow, Ümit V. Çatalyürek: BlueGene/L applications: Parallelism On a Massive Scale. IJHPCA 22(1): 33-51 (2008)
- [j15]Doruk Bozdag, Assefaw Hadish Gebremedhin, Fredrik Manne, Erik G. Boman, Ümit V. Çatalyürek: A framework for scalable greedy coloring on distributed-memory parallel computers. J. Parallel Distrib. Comput. 68(4): 515-535 (2008)
- [j14]Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, Tony C. Pan, Sunny K. Chow, Stephan Lamont, Maryann E. Martone, Joel H. Saltz: Large-Scale Biomedical Image Analysis in Grid Environments. IEEE Transactions on Information Technology in Biomedicine 12(2): 154-161 (2008)
- [c67]Ümit V. Çatalyürek, Timothy D. R. Hartley, Olcay Sertel, Manuel Ujaldon, Antonio Ruiz, Joel H. Saltz, Metin N. Gurcan: Processing of Large-Scale Biomedical Images on a Cluster of Multicore CPUs and GPUs. High Performance Computing Workshop 2008: 341-364
- [c66]Gaurav Khanna, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz, Rajkumar Kettimuthu, Ian T. Foster: Multi-hop path splitting and multi-pathing optimizations for data transfers over shared wide-area networks using gridFTP. HPDC 2008: 225-226
- [c65]Olcay Sertel, Jun Kong, Gerard Lozanski, Arwa Shanaah, Ümit V. Çatalyürek, Joel H. Saltz, Metin N. Gurcan: Texture classification using nonlinear color quantization: Application to histopathological image analysis. ICASSP 2008: 597-600
- [c64]Nagavijayalakshmi Vydyanathan, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: A Duplication Based Algorithm for Optimizing Latency Under Throughput Constraints for Streaming Workflows. ICPP 2008: 254-261
- [c63]Timothy D. R. Hartley, Ümit V. Çatalyürek, Antonio Ruiz, Francisco D. Igual, Rafael Mayo, Manuel Ujaldon: Biomedical image analysis on a cooperative cluster of GPUs and multicores. ICS 2008: 15-25
- [c62]Gaurav Khanna, Ümit V. Çatalyürek, Tahsin M. Kurç, Rajkumar Kettimuthu, P. Sadayappan, Joel H. Saltz: A dynamic scheduling approach for coordinated wide-area data transfers using GridFTP. IPDPS 2008: 1-12
- [c61]Joel H. Saltz, Scott Oster, Shannon Hastings, Stephen Langella, Renato Ferreira, Justin Permar, Ashish Sharma, David Ervin, Tony Pan, Ümit V. Çatalyürek, Tahsin M. Kurç: Translational research design templates, Grid computing, and HPC. IPDPS 2008: 1-15
- [c60]Gaurav Khanna, Ümit V. Çatalyürek, Tahsin M. Kurç, Rajkumar Kettimuthu, P. Sadayappan, Ian T. Foster, Joel H. Saltz: Using overlays for efficient data transfer over shared wide-area networks. SC 2008: 47
- 2007
- [c59]Antonio Ruiz, Olcay Sertel, Manuel Ujaldon, Ümit V. Çatalyürek, Joel H. Saltz, Metin N. Gurcan: Pathological Image Analysis Using the GPU: Stroma Classification for Neuroblastoma. BIBM 2007: 78-88
- [c58]Tulio Tavares, George Teodoro, Tahsin M. Kurç, Renato Ferreira, Dorgival Olavo Guedes Neto, Wagner Meira Jr., Ümit V. Çatalyürek, Shannon Hastings, Scott Oster, Stephen Langella, Joel H. Saltz: An Efficient and Reliable Scientific Workflow System. CCGRID 2007: 445-452
- [c57]Vijay S. Kumar, Tahsin M. Kurç, Jun Kong, Ümit V. Çatalyürek, Metin N. Gurcan, Joel H. Saltz: Performance vs. accuracy trade-offs for large-scale image analysis applications. CLUSTER 2007: 100-109
- [c56]Nagavijayalakshmi Vydyanathan, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: Toward Optimizing Latency Under Throughput Constraints for Application Workflows on Clusters. Euro-Par 2007: 173-183
- [c55]Gaurav Khanna, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: Scheduling File Transfers for Data-Intensive Jobs on Heterogeneous Clusters. Euro-Par 2007: 214-223
- [c54]Li Weng, Ümit V. Çatalyürek, Tahsin M. Kurç, Gagan Agrawal, Joel H. Saltz: Optimizing multiple queries on scientific datasets with partial replicas. GRID 2007: 259-266
- [c53]Tahsin M. Kurç, Xi Zhang, Manish Parashar, Hector Klie, Mary F. Wheeler, Ümit V. Çatalyürek, Joel H. Saltz: Dynamic Data-Driven Systems Approach for Simulation Based Optimizations. International Conference on Computational Science (1) 2007: 1213-1221
- [c52]Bhupesh Bansal, Ümit V. Çatalyürek, Jacqueline Chame, Chun Chen, Ewa Deelman, Yolanda Gil, Mary W. Hall, Vijay S. Kumar, Tahsin M. Kurç, Kristina Lerman, Aiichiro Nakano, Yoon-Ju Lee Nelson, Joel H. Saltz, Ashish Sharma, Priya Vashishta: Intelligent Optimization of Parallel and Distributed Applications. IPDPS 2007: 1-6
- [c51]Ümit V. Çatalyürek, Erik G. Boman, Karen D. Devine, Doruk Bozdag, Robert T. Heaphy, Lee Ann Riesen: Hypergraph-based Dynamic Load Balancing for Adaptive Scientific Computations. IPDPS 2007: 1-11
- [c50]Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan: A global address space framework for locality aware scheduling of block-sparse computations. IPDPS 2007: 1-8
- 2006
- [j13]Hector Klie, Wolfgang Bangerth, X. Gai, Mary F. Wheeler, Paul L. Stoffa, Mrinal K. Sen, Manish Parashar, Ümit V. Çatalyürek, Joel H. Saltz, Tahsin M. Kurç: Models, methods and middleware for grid-enabled multiphysics oil reservoir management. Eng. Comput. (Lond.) 22(3-4): 349-370 (2006)
- [j12]Xi Zhang, Benjamin Rutt, Ümit V. Çatalyürek, Tahsin M. Kurç, Paul L. Stoffa, Mrinal K. Sen, Joel H. Saltz: Supporting Scalable and Distributed Data Subsetting and Aggregation in Large-Scale Seismic Data Analysis. IJHPCA 20(3): 423-438 (2006)
- [j11]Tahsin M. Kurç, Daniel Janies, Andrew D. Johnson, Stephen Langella, Scott Oster, Shannon Hastings, Farhat Habib, Terry Camerlengo, David Ervin, Ümit V. Çatalyürek, Joel H. Saltz: Application of Information Technology: An XML-based System for Synthesis of Data from Disparate Databases. JAMIA 13(3): 289-301 (2006)
- [c49]Timothy D. R. Hartley, Ümit V. Çatalyürek, Füsun Özgüner, Andy Yoo, Scott Kohn, Keith W. Henderson: MSSG: A Framework for Massive-Scale Semantic Graphs. CLUSTER 2006
- [c48]Nagavijayalakshmi Vydyanathan, Sriram Krishnamoorthy, Gerald Sabin, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: Locality Conscious Processor Allocation and Scheduling for Mixed Parallel Applications. CLUSTER 2006
- [c47]Ümit V. Çatalyürek, Sivaramakrishnan Narayanan, Olcay Sertel, Jun Kong, Berkant Barla Cambazoglu, Tony Pan, Ashish Sharma, Shannon Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurç, Metin Nafi Gürcan, Joel H. Saltz: Service-Based Access to and Processing of Large Scientific Datasets. High Performance Computing Workshop 2006: 345-362
- [c46]Gaurav Khanna, Nagavijayalakshmi Vydyanathan, Ümit V. Çatalyürek, Tahsin M. Kurç, Sriram Krishnamoorthy, P. Sadayappan, Joel H. Saltz: Task Scheduling and File Replication for Data-Intensive Jobs with Batch-shared I/O. HPDC 2006: 241-252
- [c45]Li Weng, Ümit V. Çatalyürek, Tahsin M. Kurç, Gagan Agrawal, Joel H. Saltz: Using Space and Attribute Partitioned Partial Replicas for Data Subsetting and Aggregation Queries. ICPP 2006: 271-280
- [c44]Nagavijayalakshmi Vydyanathan, Sriram Krishnamoorthy, Gerald Sabin, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: An Integrated Approach for Processor Allocation and Scheduling of Mixed-Parallel Applications. ICPP 2006: 443-450
- [c43]Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz: On Creating Efficient Object-relational Views of Scientific Datasets. ICPP 2006: 551-558
- [c42]Doruk Bozdag, Ümit V. Çatalyürek, Füsun Özgüner: A task duplication based bottom-up scheduling algorithm for heterogeneous environments. IPDPS 2006
- [c41]Karen D. Devine, Erik G. Boman, Robert T. Heaphy, Rob H. Bisseling, Ümit V. Çatalyürek: Parallel hypergraph partitioning for scientific computing. IPDPS 2006
- [c40]Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan: An extensible global address space framework with decoupled task and data abstractions. IPDPS 2006
- [c39]Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, P. Sadayappan: An approach to locality-conscious load balancing and transparent memory hierarchy management with a global-address-space parallel programming model. IPDPS 2006
- [c38]Gaurav Khanna, Ümit V. Çatalyürek, Tahsin M. Kurç, P. Sadayappan, Joel H. Saltz: A Data Locality Aware Online Scheduling Approach for I/O-Intensive Jobs with File Sharing. JSSPP 2006: 141-160
- [c37]Duygu Ucar, Sitaram Asur, Ümit V. Çatalyürek, Srinivasan Parthasarathy: Improving Functional Modularity in Protein-Protein Interactions Graphs Using Hub-Induced Subgraphs. PKDD 2006: 371-382
- [c36]Vijay S. Kumar, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz, Sunny K. Chow, Stephan Lamont, Maryann E. Martone: Imaging and visual analysis - Large image correction and warping in a cluster environment. SC 2006: 79
- [c35]Sriram Krishnamoorthy, Ümit V. Çatalyürek, Jarek Nieplocha, Atanas Rountev, P. Sadayappan: Data management and query - Hypergraph partitioning for automatic memory hierarchy management. SC 2006: 98
- 2005
- [j10]Tahsin M. Kurç, Ümit V. Çatalyürek, Xi Zhang, Joel H. Saltz, Ryan Martino, Mary F. Wheeler, Malgorzata Peszynska, Alan Sussman, Christian Hansen, Mrinal K. Sen, Roustam Seifoullaev, Paul L. Stoffa, Carlos Torres-Verdín, Manish Parashar: A simulation and data analysis system for large-scale, data-driven oil reservoir simulation studies. Concurrency - Practice and Experience 17(11): 1441-1467 (2005)
- [j9]Manish Parashar, Hector Klie, Ümit V. Çatalyürek, Tahsin M. Kurç, Wolfgang Bangerth, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler: Application of Grid-enabled technologies for solving optimization problems in data-driven reservoir studies. Future Generation Comp. Syst. 21(1): 19-26 (2005)
- [j8]Shannon Hastings, Scott Oster, Stephen Langella, Tahsin M. Kurç, Tony Pan, Ümit V. Çatalyürek, Joel H. Saltz: Application of Information Technology: A Grid-Based Image Archival and Analysis System. JAMIA 12(3): 286-295 (2005)
- [j7]Shannon Hastings, Matheus Ribeiro, Stephen Langella, Scott Oster, Ümit V. Çatalyürek, Tony Pan, Kun Huang, Renato Ferreira, Joel H. Saltz, Tahsin M. Kurç: XML database support for distributed execution of data-intensive scientific workflows. SIGMOD Record 34(3): 50-55 (2005)
- [c34]Li Weng, Ümit V. Çatalyürek, Tahsin M. Kurç, Gagan Agrawal, Joel H. Saltz: Servicing range queries on multidimensional datasets with partial replicas. CCGRID 2005: 726-733
- [c33]Gaurav Khanna, Nagavijayalakshmi Vydyanathan, Tahsin M. Kurç, Ümit V. Çatalyürek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan: A hypergraph partitioning based approach for scheduling of tasks with batch-shared I/O. CCGRID 2005: 792-799
- [c32]Benjamin Rutt, Vijay S. Kumar, Tony Pan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz, Yujun Wang: Distributed Out-of-Core Preprocessing of Very Large Microscopy Images for Efficient Querying. CLUSTER 2005: 1-10
- [c31]Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz: Servicing Seismic and Oil Reservoir Simulation Data Through Grid Data Services. DMG 2005: 129-142
- [c30]Erik G. Boman, Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne: A Scalable Parallel Graph Coloring Algorithm for Distributed Memory Computers. Euro-Par 2005: 241-251
- [c29]Doruk Bozdag, Ümit V. Çatalyürek, Assefaw Hadish Gebremedhin, Fredrik Manne, Erik G. Boman, Füsun Özgüner: A Parallel Distance-2 Graph Coloring Algorithm for Distributed Memory Computers. HPCC 2005: 796-806
- [c28]Manish Parashar, Vincent Matossian, Wolfgang Bangerth, Hector Klie, Benjamin Rutt, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz, Mary F. Wheeler: Towards Dynamic Data-Driven Optimization of Oil Well Placement. International Conference on Computational Science (2) 2005: 656-663
- [c27]Doruk Bozdag, Füsun Özgüner, Eylem Ekici, Ümit V. Çatalyürek: A Task Duplication Based Scheduling Algorithm Using Partial Schedules. ICPP 2005: 630-637
- [c26]Ümit V. Çatalyürek, Shannon Hastings, Kun Huang, Vijay S. Kumar, Tahsin M. Kurç, Stephen Langella, Sivaramakrishnan Narayanan, Scott Oster, Tony Pan, Benjamin Rutt, Xi Zhang, Joel H. Saltz: Supporting Large Scale Medical and Scientific Datasets. PARCO 2005: 3-14
- [c25]Shannon Hastings, Stephen Langella, Scott Oster, Tahsin M. Kurç, Tony Pan, Ümit V. Çatalyürek, Daniel Janies, Joel H. Saltz: Grid-based management of biomedical data using an XML-based distributed data management system. SAC 2005: 105-109
- [c24]Andy Yoo, Edmond Chow, Keith W. Henderson, Will McLendon III, Bruce Hendrickson, Ümit V. Çatalyürek: A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L. SC 2005: 25
- 2004
- [c23]Xi Zhang, Tony Pan, Ümit V. Çatalyürek, Tahsin M. Kurç, Joel H. Saltz: Serving queries to multi-resolution datasets on disk-based storage clusters. CCGRID 2004: 490-498
- [c22]Stephen Langella, Shannon Hastings, Scott Oster, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz: A distributed data management middleware for data-driven application systems. CLUSTER 2004: 267-276
- [c21]Nagavijayalakshmi Vydyanathan, Gaurav Khanna, Tahsin M. Kurç, Ümit V. Çatalyürek, Pete Wyckoff, Joel H. Saltz, P. Sadayappan: Use of PVFS for Efficient Execution of Jobs with Pipeline-Shared I/O. GRID 2004: 235-242
- [c20]Matheus Ribeiro, Tahsin M. Kurç, Tony Pan, Kun Huang, Ümit V. Çatalyürek, Xi Zhang, Stephen Langella, Shannon Hastings, Scott Oster, Renato Ferreira, Joel H. Saltz: Tools for efficient subsetting and pipelined processing of large scale, distributed biomedical image data. High Performance Computing Workshop 2004: 403-422
- [c19]Xi Zhang, Tahsin M. Kurç, Tony Pan, Ümit V. Çatalyürek, Sivaramakrishnan Narayanan, Pete Wyckoff, Joel H. Saltz: Strategies for Using Additional Resources in Parallel Hash-Based Join Algorithms. HPDC 2004: 4-13
- [c18]Li Weng, Gagan Agrawal, Ümit V. Çatalyürek, Tahsin M. Kurç, Sivaramakrishnan Narayanan, Joel H. Saltz: An Approach for Automatic Data Virtualization. HPDC 2004: 24-33
- [c17]Manish Parashar, Hector Klie, Ümit V. Çatalyürek, Tahsin M. Kurç, Vincent Matossian, Joel H. Saltz, Mary F. Wheeler: Application of Grid-Enabled Technologies for Solving Optimization Problems in Data-Driven Reservoir Studies. International Conference on Computational Science 2004: 805-812
- [c16]Li Weng, Gagan Agrawal, Ümit V. Çatalyürek, Joel H. Saltz: Supporting SQL-3 Aggregations on Grid-Based Data Repositories. LCPC 2004: 283-298
- 2003
- [j6]Sivaramakrishnan Narayanan, Tahsin M. Kurç, Ümit V. Çatalyürek, Joel H. Saltz: Database Support for Data-Driven Scientific Applications in the Grid. Parallel Processing Letters 13(2): 245-271 (2003)
- [j5]Ümit V. Çatalyürek, Michael D. Beynon, Chialin Chang, Tahsin M. Kurç, Alan Sussman, Joel H. Saltz: The virtual microscope. IEEE Transactions on Information Technology in Biomedicine 7(4): 230-248 (2003)
- [c15]Shannon Hastings, Tahsin M. Kurç, Stephen Langella, Ümit V. Çatalyürek, Tony Pan, Joel H. Saltz: Image Processing or the Grid: A Toolkit or Building Grid-enabled Image Processing Applications. CCGRID 2003: 36-43
- [c14]Sivaramakrishnan Narayanan, Ümit V. Çatalyürek, Tahsin M. Kurç, Xi Zhang, Joel H. Saltz: Applying Database Support for Large Scale Data Driven Science in Distributed Environments. GRID 2003: 141-148
- [c13]Pavan Balaji, Jiesheng Wu, Tahsin M. Kurç, Ümit V. Çatalyürek, Dhabaleswar K. Panda, Joel H. Saltz: Impact of High Performance Sockets on Data Intensive Applications. HPDC 2003: 24-33
- [c12]Joel H. Saltz, Ümit V. Çatalyürek, Tahsin M. Kurç, Mike Gray, Shannon Hastings, Stephen Langella, Sivaramakrishnan Narayanan, Ryan Martino, Steven Bryant, Malgorzata Peszynska, Mary F. Wheeler, Alan Sussman, Michael D. Beynon, Christian Hansen, Don Stredney, Dennis Sessanna: Driving Scientific Applications by Data in Distributed Environments. International Conference on Computational Science 2003: 355-364
- [c11]Ümit V. Çatalyürek, Mike Gray, Tahsin M. Kurç, Joel H. Saltz, Eric Stahlberg, Renato Ferreira: A Component-based Implementation of Multiple Sequence Alignment. SAC 2003: 122-126
- [c10]Tahsin M. Kurç, Feng Lee, Gagan Agrawal, Ümit V. Çatalyürek, Renato Ferreira, Joel H. Saltz: Optimizing Reduction Computations In a Distributed Environment. SC 2003: 9
- 2002
- [j4]Michael D. Beynon, Chialin Chang, Ümit V. Çatalyürek, Tahsin M. Kurç, Alan Sussman, Henrique Andrade, Renato Ferreira, Joel H. Saltz: Processing large-scale multi-dimensional data in parallel and distributed environments. Parallel Computing 28(5): 827-859 (2002)
- [c9]Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Alan Sussman, Joel H. Saltz: Efficient Manipulation of Large Datasets on Heterogeneous Storage Systems. IPDPS 2002
- [c8]Ümit V. Çatalyürek, Eric Stahlberg, Renato Ferreira, Tahsin M. Kurç, Joel H. Saltz: Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments. IPDPS 2002
- [c7]Matthew Spencer, Renato Ferreira, Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Alan Sussman, Joel H. Saltz: Executing multiple pipelined data analysis operations in the grid. SC 2002: 1-18
- 2001
- [j3]Tahsin M. Kurç, Ümit V. Çatalyürek, Chialin Chang, Alan Sussman, Joel H. Saltz: Visualization of Large Data Sets with the Active Data Repository. IEEE Computer Graphics and Applications 21(4): 24-33 (2001)
- [j2]Michael D. Beynon, Tahsin M. Kurç, Ümit V. Çatalyürek, Chialin Chang, Alan Sussman, Joel H. Saltz: Distributed processing of very large datasets with DataCutter. Parallel Computing 27(11): 1457-1478 (2001)
- [c6]Michael D. Beynon, Alan Sussman, Ümit V. Çatalyürek, Tahsin M. Kurç, Joel H. Saltz: Performance Optimization for Data Intensive Grid Applications. Active Middleware Services 2001: 97-105
- [c5]Ümit V. Çatalyürek, Cevdet Aykanat: A Fine-Grain Hypergraph Model for 2D Decomposition of Sparse Matrices. IPDPS 2001: 118
- [c4]Chialin Chang, Tahsin M. Kurç, Alan Sussman, Ümit V. Çatalyürek, Joel H. Saltz: A Hypergraph-Based Workload Partitioning Strategy for Parallel Data Aggregation. PPSC 2001
- [c3]Ümit V. Çatalyürek, Cevdet Aykanat: A hypergraph-partitioning approach for coarse-grain decomposition. SC 2001: 28
1990 – 1999
- 1999
- [j1]Ümit V. Çatalyürek, Cevdet Aykanat: Hypergraph-Partitioning-Based Decomposition for Parallel Sparse-Matrix Vector Multiplication. IEEE Trans. Parallel Distrib. Syst. 10(7): 673-693 (1999)
- 1996
- [c2]Ümit V. Çatalyürek, Cevdet Aykanat: Decomposing Irregularly Sparse Matrices for Parallel Matrix-Vector Multiplication. IRREGULAR 1996: 75-86
- 1995
- [c1]Ali Pinar, Ümit V. Çatalyürek, Cevdet Aykanat, Mustafa Pinar: Decomposing Linear Programs for Parallel Solution. PARA 1995: 473-482
Coauthor Index
[j29] [j19] [c68] [j17] [j14] [c66] [c64] [c62] [c61] [c60] [c58] [c57] [c56] [c55] [c54] [c53] [c52] [j13] [j12] [j11] [c48] [c47] [c46] [c45] [c44] [c43] [c38] [c36] [j10] [j9] [j8] [j7] [c34] [c33] [c32] [c31] [c28] [c26] [c25] [c23] [c22] [c21] [c20] [c19] [c18] [c17] [j6] [j5] [c15] [c14] [c13] [c12] [c11] [c10] [j4] [c9] [c8] [c7] [j3] [j2] [c6] [c4]
[j29] [c87] [j24] [j23] [j21] [j19] [j18] [c68] [j17] [j14] [c67] [c66] [c65] [c64] [c62] [c61] [c60] [c59] [c58] [c57] [c56] [c55] [c54] [c53] [c52] [j13] [j12] [j11] [c48] [c47] [c46] [c45] [c44] [c43] [c38] [c36] [j10] [j9] [j8] [j7] [c34] [c33] [c32] [c31] [c28] [c26] [c25] [c23] [c22] [c21] [c20] [c19] [c18] [c17] [c16] [j6] [j5] [c15] [c14] [c13] [c12] [c11] [c10] [j4] [c9] [c8] [c7] [j3] [j2] [c6] [c4]
data released under the ODC-BY 1.0 license. See also our legal information page
last updated on 2013-10-02 11:00 CEST by the dblp team