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ORCIDBibTeX records: Nikolaj Zimic
@article{DBLP:journals/biosystems/MoskonPSZM22,
author = {Miha Moskon and
Ziga Pusnik and
Lidija Stanovnik and
Nikolaj Zimic and
Miha Mraz},
title = {A computational design of a programmable biological processor},
journal = {Biosyst.},
volume = {221},
pages = {104778},
year = {2022},
url = {https://doi.org/10.1016/j.biosystems.2022.104778},
doi = {10.1016/J.BIOSYSTEMS.2022.104778},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biosystems/MoskonPSZM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/RezenMMZRM22,
author = {Tadeja Rezen and
Alexandre Martins and
Miha Mraz and
Nikolaj Zimic and
Damjana Rozman and
Miha Moskon},
title = {Integration of omics data to generate and analyse {COVID-19} specific
genome-scale metabolic models},
journal = {Comput. Biol. Medicine},
volume = {145},
pages = {105428},
year = {2022},
url = {https://doi.org/10.1016/j.compbiomed.2022.105428},
doi = {10.1016/J.COMPBIOMED.2022.105428},
timestamp = {Wed, 27 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/RezenMMZRM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/MoskonPZM21,
author = {Miha Moskon and
Ziga Pusnik and
Nikolaj Zimic and
Miha Mraz},
title = {Field-programmable biological circuits and configurable (bio)logic
blocks for distributed biological computing},
journal = {Comput. Biol. Medicine},
volume = {128},
pages = {104109},
year = {2021},
url = {https://doi.org/10.1016/j.compbiomed.2020.104109},
doi = {10.1016/J.COMPBIOMED.2020.104109},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/MoskonPZM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nca/MoskonKZM21,
author = {Miha Moskon and
Roman Komac and
Nikolaj Zimic and
Miha Mraz},
title = {Distributed biological computation: from oscillators, logic gates
and switches to a multicellular processor and neural computing applications},
journal = {Neural Comput. Appl.},
volume = {33},
number = {15},
pages = {8923--8938},
year = {2021},
url = {https://doi.org/10.1007/s00521-021-05711-6},
doi = {10.1007/S00521-021-05711-6},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nca/MoskonKZM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fuin/BordonMZM18,
author = {Jure Bordon and
Miha Moskon and
Nikolaj Zimic and
Miha Mraz},
title = {Semi-quantitative Modelling of Gene Regulatory Processes with Unknown
Parameter Values Using Fuzzy Logic and Petri Nets},
journal = {Fundam. Informaticae},
volume = {160},
number = {1-2},
pages = {81--100},
year = {2018},
url = {https://doi.org/10.3233/FI-2018-1675},
doi = {10.3233/FI-2018-1675},
timestamp = {Fri, 18 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fuin/BordonMZM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MoskonZM18,
author = {Miha Moskon and
Nikolaj Zimic and
Miha Mraz},
title = {Grohar: Automated Visualization of Genome-Scale Metabolic Models and
Their Pathways},
journal = {J. Comput. Biol.},
volume = {25},
number = {5},
pages = {505--508},
year = {2018},
url = {https://doi.org/10.1089/cmb.2017.0209},
doi = {10.1089/CMB.2017.0209},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/MoskonZM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/RejcMTOVMPZCRMM17,
author = {Ziva Rejc and
Lidija Magdevska and
Tilen Trselic and
Timotej Osolin and
Rok Vodopivec and
Jakob Mraz and
Eva Pavliha and
Nikolaj Zimic and
Tanja Cvitanovic and
Damjana Rozman and
Miha Moskon and
Miha Mraz},
title = {Computational modelling of genome-scale metabolic networks and its
application to {CHO} cell cultures},
journal = {Comput. Biol. Medicine},
volume = {88},
pages = {150--160},
year = {2017},
url = {https://doi.org/10.1016/j.compbiomed.2017.07.005},
doi = {10.1016/J.COMPBIOMED.2017.07.005},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/RejcMTOVMPZCRMM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/MagdevskaPMZM17,
author = {Lidija Magdevska and
Ziga Pusnik and
Miha Mraz and
Nikolaj Zimic and
Miha Moskon},
title = {Computational design of synchronous sequential structures in biological
systems},
journal = {J. Comput. Sci.},
volume = {18},
pages = {24--31},
year = {2017},
url = {https://doi.org/10.1016/j.jocs.2016.11.010},
doi = {10.1016/J.JOCS.2016.11.010},
timestamp = {Tue, 25 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jocs/MagdevskaPMZM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/VasylchenkovaMZ17,
author = {Anastasiia Vasylchenkova and
Miha Mraz and
Nikolaj Zimic and
Miha Moskon},
title = {Classical Mechanics Approach Applied to Analysis of Genetic Oscillators},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {14},
number = {3},
pages = {721--727},
year = {2017},
url = {https://doi.org/10.1109/TCBB.2016.2550456},
doi = {10.1109/TCBB.2016.2550456},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/VasylchenkovaMZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BizjakZMM16,
author = {Manca Bizjak and
Nikolaj Zimic and
Miha Mraz and
Miha Moskon},
title = {Computational Framework for Modeling Multiple Noncooperative Transcription
Factor Binding and Its Application to the Analysis of Nuclear Factor
Kappa {B} Oscillatory Response},
journal = {J. Comput. Biol.},
volume = {23},
number = {12},
pages = {923--933},
year = {2016},
url = {https://doi.org/10.1089/cmb.2016.0065},
doi = {10.1089/CMB.2016.0065},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/BizjakZMM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/PetroniZMM15,
author = {Mattia Petroni and
Nikolaj Zimic and
Miha Mraz and
Miha Moskon},
title = {Stochastic Simulation Algorithm for Gene Regulatory Networks with
Multiple Binding Sites},
journal = {J. Comput. Biol.},
volume = {22},
number = {3},
pages = {218--226},
year = {2015},
url = {https://doi.org/10.1089/cmb.2014.0064},
doi = {10.1089/CMB.2014.0064},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/PetroniZMM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BordonMZM15,
author = {Jure Bordon and
Miha Moskon and
Nikolaj Zimic and
Miha Mraz},
title = {Fuzzy Logic as a Computational Tool for Quantitative Modelling of
Biological Systems with Uncertain Kinetic Data},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {5},
pages = {1199--1205},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2015.2424424},
doi = {10.1109/TCBB.2015.2424424},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/BordonMZM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vlsisp/SoberlZLKM15,
author = {Domen Soberl and
Nikolaj Zimic and
Ales Leonardis and
Jaka Krivic and
Miha Moskon},
title = {Hardware Implementation of {FAST} Algorithm for Mobile Applications},
journal = {J. Signal Process. Syst.},
volume = {79},
number = {3},
pages = {247--256},
year = {2015},
url = {https://doi.org/10.1007/s11265-013-0843-2},
doi = {10.1007/S11265-013-0843-2},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/vlsisp/SoberlZLKM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/StrazarMZM14,
author = {Martin Strazar and
Miha Mraz and
Nikolaj Zimic and
Miha Moskon},
title = {An adaptive genetic algorithm for parameter estimation of biological
oscillator models to achieve target quantitative system response},
journal = {Nat. Comput.},
volume = {13},
number = {1},
pages = {119--127},
year = {2014},
url = {https://doi.org/10.1007/s11047-013-9383-8},
doi = {10.1007/S11047-013-9383-8},
timestamp = {Thu, 02 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nc/StrazarMZM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvlsi/PecarJZMB09,
author = {Primoz Pecar and
Miha Janez and
Nikolaj Zimic and
Miha Mraz and
Iztok Lebar Bajec},
title = {The Ternary Quantum-dot Cellular Automata Memorizing Cell},
booktitle = {{IEEE} Computer Society Annual Symposium on VLSI, {ISVLSI} 2009, 13-15
May 2009, Tampa, Florida, {USA}},
pages = {223--228},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/ISVLSI.2009.32},
doi = {10.1109/ISVLSI.2009.32},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isvlsi/PecarJZMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icqnm/MrazMFZMJB08,
author = {Miha Mraz and
Zlatko Magdevski and
Jelena Ficzko and
Nikolaj Zimic and
Miha Moskon and
Miha Janez and
Iztok Lebar Bajec},
title = {Towards Multistate Nanocomputing: The Implementation of a Primitive
Fuzzy Controller},
booktitle = {Second International Conference on Quantum, Nano, and Micro Technologies,
{ICQNM} 2008, February 10-15, 2008, Sainte Luce, Martinique, French
Caribbean},
pages = {45--49},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ICQNM.2008.12},
doi = {10.1109/ICQNM.2008.12},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icqnm/MrazMFZMJB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mcm/ZimicM06,
author = {Nikolaj Zimic and
Miha Mraz},
title = {Decomposition of a complex fuzzy controller for the truck-and-trailer
reverse parking problem},
journal = {Math. Comput. Model.},
volume = {43},
number = {5-6},
pages = {632--645},
year = {2006},
url = {https://doi.org/10.1016/j.mcm.2005.10.005},
doi = {10.1016/J.MCM.2005.10.005},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/mcm/ZimicM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nci/MrazBZ04,
author = {Miha Mraz and
Iztok Lebar Bajec and
Nikolaj Zimic},
title = {Fuzzy logic used for modelling and simulation of massive processes:
{A} useful tool for nanotechnologies?},
booktitle = {Proceedings of the {IASTED} International Conference on Neural Networks
and Computational Intelligence, {NCI} 2004, February 23-25, 2004,
Grindelwald, Switzerland},
pages = {274--278},
publisher = {{IASTED/ACTA} Press},
year = {2004},
timestamp = {Thu, 09 Nov 2006 13:47:32 +0100},
biburl = {https://dblp.org/rec/conf/nci/MrazBZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/BajecTOZ03,
author = {Iztok Lebar Bajec and
Primoz Trunk and
D. Oseli and
Nikolaj Zimic},
title = {Virtual coronary cineangiography},
journal = {Comput. Biol. Medicine},
volume = {33},
number = {3},
pages = {293--302},
year = {2003},
url = {https://doi.org/10.1016/S0010-4825(02)00095-1},
doi = {10.1016/S0010-4825(02)00095-1},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/BajecTOZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifsa/BajecZM03,
author = {Iztok Lebar Bajec and
Nikolaj Zimic and
Miha Mraz},
editor = {Taner Bilgi{\c{c}} and
Bernard De Baets and
Okyay Kaynak},
title = {Fuzzifying the Thoughts of Animats},
booktitle = {Fuzzy Sets and Systems - {IFSA} 2003, 10th International Fuzzy Systems
Association World Congress, Istanbul, Turkey, June 30 - July 2, 2003,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2715},
pages = {195--202},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/3-540-44967-1\_23},
doi = {10.1007/3-540-44967-1\_23},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/ifsa/BajecZM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictai/MrazZLB00,
author = {Miha Mraz and
Nikolaj Zimic and
Iztok Lapanja and
Iztok Lebar Bajec},
title = {Fuzzy cellular automata: from theory to applications},
booktitle = {12th {IEEE} International Conference on Tools with Artificial Intelligence
{(ICTAI} 2000), 13-15 November 2000, Vancouver, BC, Canada},
pages = {320},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/TAI.2000.889889},
doi = {10.1109/TAI.2000.889889},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ictai/MrazZLB00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fss/VirantZM99,
author = {Jernej Virant and
Nikolaj Zimic and
Miha Mraz},
title = {T-type fuzzy memory cells},
journal = {Fuzzy Sets Syst.},
volume = {102},
number = {2},
pages = {175--183},
year = {1999},
url = {https://doi.org/10.1016/S0165-0114(97)00099-7},
doi = {10.1016/S0165-0114(97)00099-7},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fss/VirantZM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jifs/MrazZV99,
author = {Miha Mraz and
Nikolaj Zimic and
Jernej Virant},
title = {Intelligent bush fire spread prediction using fuzzy cellular automata},
journal = {J. Intell. Fuzzy Syst.},
volume = {7},
number = {2},
pages = {203--207},
year = {1999},
url = {http://content.iospress.com/articles/journal-of-intelligent-and-fuzzy-systems/ifs082},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jifs/MrazZV99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fss/VirantZ96,
author = {Jernej Virant and
Nikolaj Zimic},
title = {Attention to time in fuzzy logic},
journal = {Fuzzy Sets Syst.},
volume = {82},
number = {1},
pages = {39--49},
year = {1996},
url = {https://doi.org/10.1016/0165-0114(95)00274-X},
doi = {10.1016/0165-0114(95)00274-X},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fss/VirantZ96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tfs/VirantZ95,
author = {Jernej Virant and
Nikolaj Zimic},
title = {Fuzzy automata with fuzzy relief},
journal = {{IEEE} Trans. Fuzzy Syst.},
volume = {3},
number = {1},
pages = {69--74},
year = {1995},
url = {https://doi.org/10.1109/91.366572},
doi = {10.1109/91.366572},
timestamp = {Tue, 12 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tfs/VirantZ95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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