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ORCIDBibTeX records: Alex Zelikovsky
@article{DBLP:journals/jcb/BansalMMPRSZ23,
author = {Mukul S. Bansal and
Ion I. Mandoiu and
Marmar Moussa and
Murray Patterson and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {Special Issue: 11th International Computational Advances in Bio and
Medical Sciences {(ICCABS} 2021)},
journal = {J. Comput. Biol.},
volume = {30},
number = {4},
pages = {363--365},
year = {2023},
url = {https://doi.org/10.1089/cmb.2023.29085.msb},
doi = {10.1089/CMB.2023.29085.MSB},
timestamp = {Mon, 29 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/BansalMMPRSZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SahooPSZ23,
author = {Bikram Sahoo and
Zandra Pinnix and
Seth Sims and
Alex Zelikovsky},
title = {Identifying Biomarkers Using Support Vector Machine to Understand
the Racial Disparity in Triple-Negative Breast Cancer},
journal = {J. Comput. Biol.},
volume = {30},
number = {4},
pages = {502--517},
year = {2023},
url = {https://doi.org/10.1089/cmb.2022.0422},
doi = {10.1089/CMB.2022.0422},
timestamp = {Fri, 02 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/SahooPSZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CaiSZ23,
author = {Zhipeng Cai and
Pavel Skums and
Alexander Zelikovsky},
title = {\emph{Special Issue, Part I} 18th International Symposium on Bioinformatics
Research and Applications {(ISBRA} 2022)},
journal = {J. Comput. Biol.},
volume = {30},
number = {8},
pages = {829--830},
year = {2023},
url = {https://doi.org/10.1089/cmb.2023.29095.az},
doi = {10.1089/CMB.2023.29095.AZ},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/CaiSZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/JuyalHNGZ23,
author = {Akshay Juyal and
Roya Hosseini and
Daniel Novikov and
Mark Grinshpon and
Alex Zelikovsky},
title = {Reconstruction of Viral Variants via Monte Carlo Clustering},
journal = {J. Comput. Biol.},
volume = {30},
number = {9},
pages = {1009--1018},
year = {2023},
url = {https://doi.org/10.1089/cmb.2023.0154},
doi = {10.1089/CMB.2023.0154},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/JuyalHNGZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/AliSKZKP23,
author = {Sarwan Ali and
Bikram Sahoo and
Muhammad Asad Khan and
Alexander Zelikovsky and
Imdadullah Khan and
Murray Patterson},
title = {Efficient Approximate Kernel Based Spike Sequence Classification},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {20},
number = {6},
pages = {3376--3388},
year = {2023},
url = {https://doi.org/10.1109/TCBB.2022.3206284},
doi = {10.1109/TCBB.2022.3206284},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcbb/AliSKZKP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SaghaianSIZ23,
author = {Hossein Saghaian and
Pavel Skums and
Yurij Ionov and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Graph-Based Motif Discovery in Mimotope Profiles of Serum Antibody
Repertoire},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {214--226},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_17},
doi = {10.1007/978-981-99-7074-2\_17},
timestamp = {Tue, 10 Oct 2023 15:52:57 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SaghaianSIZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FarooqNJZ23,
author = {Hafsa Farooq and
Daniel Novikov and
Akshay Juyal and
Alexander Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Genetic Algorithm with Evolutionary Jumps},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {453--463},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_36},
doi = {10.1007/978-981-99-7074-2\_36},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FarooqNJZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SahooAPZ23,
author = {Bikram Sahoo and
Temitope Adeyeha and
Zandra Pinnix and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Exploring Racial Disparities in Triple-Negative Breast Cancer: Insights
from Feature Selection Algorithms},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {487--497},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_39},
doi = {10.1007/978-981-99-7074-2\_39},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SahooAPZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SahooPZ23,
author = {Bikram Sahoo and
Zandra Pinnix and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Deep Learning Reveals Biological Basis of Racial Disparities in Quadruple-Negative
Breast Cancer},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {498--508},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_40},
doi = {10.1007/978-981-99-7074-2\_40},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SahooPZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TayebiJZP23,
author = {Zahra Tayebi and
Akshay Juyal and
Alexander Zelikovsky and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Simulating Tumor Evolution from scDNA-Seq as an Accumulation of both
SNVs and CNAs},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {530--540},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_43},
doi = {10.1007/978-981-99-7074-2\_43},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TayebiJZP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2023,
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2},
doi = {10.1007/978-981-99-7074-2},
isbn = {978-981-99-7073-5},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CaiSZ22,
author = {Zhipeng Cai and
Pavel Skums and
Alexander Zelikovsky},
title = {17th International Symposium on Bioinformatics Research and Applications
{(ISBRA} 2021)},
journal = {J. Comput. Biol.},
volume = {29},
number = {10},
pages = {1059--1060},
year = {2022},
url = {https://doi.org/10.1089/cmb.2022.29070.zc},
doi = {10.1089/CMB.2022.29070.ZC},
timestamp = {Tue, 15 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/CaiSZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ZhaoSZSSSHW22,
author = {Fengpan Zhao and
Pavel Skums and
Alex Zelikovsky and
Eric L. Sevigny and
Monica Haavisto Swahn and
Sheryl M. Strasser and
Yan Huang and
Yubao Wu},
title = {Computational Approaches to Detect Illicit Drug Ads and Find Vendor
Communities Within Social Media Platforms},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {1},
pages = {180--191},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2020.2978476},
doi = {10.1109/TCBB.2020.2978476},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ZhaoSZSSSHW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JuyalHNGZ22,
author = {Akshay Juyal and
Roya Hosseini and
Daniel Novikov and
Mark Grinshpon and
Alex Zelikovsky},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Entropy Based Clustering of Viral Sequences},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {369--380},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_33},
doi = {10.1007/978-3-031-23198-8\_33},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JuyalHNGZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iccabs/2021,
editor = {Mukul S. Bansal and
Ion I. Mandoiu and
Marmar Moussa and
Murray Patterson and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {Computational Advances in Bio and Medical Sciences: 11th International
Conference, {ICCABS} 2021, Virtual Event, December 16-18, 2021, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {13254},
publisher = {Springer International Publishing},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-17531-2},
doi = {10.1007/978-3-031-17531-2},
isbn = {978-3-031-17530-5},
timestamp = {Thu, 04 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/2021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-04952,
author = {Sarwan Ali and
Bikram Sahoo and
Muhammad Asad Khan and
Alexander Zelikovsky and
Imdadullah Khan and
Murray Patterson},
title = {Efficient Approximate Kernel Based Spike Sequence Classification},
journal = {CoRR},
volume = {abs/2209.04952},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.04952},
doi = {10.48550/ARXIV.2209.04952},
eprinttype = {arXiv},
eprint = {2209.04952},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-04952.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KnyazevHSZ21,
author = {Sergey Knyazev and
Lauren Hughes and
Pavel Skums and
Alexander Zelikovsky},
title = {Epidemiological data analysis of viral quasispecies in the next-generation
sequencing era},
journal = {Briefings Bioinform.},
volume = {22},
number = {1},
pages = {96--108},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa101},
doi = {10.1093/BIB/BBAA101},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KnyazevHSZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Mandoiu0NRSZ21,
author = {Ion I. Mandoiu and
T. M. Murali and
Giri Narasimhan and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {Special Issue: 9th International Computational Advances in Bio and
Medical Sciences {(ICCABS} 2019)},
journal = {J. Comput. Biol.},
volume = {28},
number = {2},
pages = {115--116},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.29034.im},
doi = {10.1089/CMB.2021.29034.IM},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/Mandoiu0NRSZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/0001SPZ21,
author = {Zhipeng Cai and
Pavel Skums and
Yuri Porozov and
Alexander Zelikovsky},
title = {Special Issue: 16th International Symposium on Bioinformatics Research
and Applications {(ISBRA} 2020)},
journal = {J. Comput. Biol.},
volume = {28},
number = {7},
pages = {636},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.29038.zc},
doi = {10.1089/CMB.2021.29038.ZC},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/0001SPZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/0001SPZ21a,
author = {Zhipeng Cai and
Pavel Skums and
Yuri Porozov and
Alexander Zelikovsky},
title = {Special Issue: 16th International Symposium on Bioinformatics Research
and Applications {(ISBRA} 2020)},
journal = {J. Comput. Biol.},
volume = {28},
number = {8},
pages = {745--746},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.29041.zc},
doi = {10.1089/CMB.2021.29041.ZC},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/0001SPZ21a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RondelHSKMSMPPZ21,
author = {Filipp Rondel and
Roya Hosseini and
Bikram Sahoo and
Sergey Knyazev and
Igor Mandric and
Frank Stewart and
Ion I. Mandoiu and
Bogdan Pasaniuc and
Yuri Porozov and
Alexander Zelikovsky},
title = {Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic
Communities Using Metatranscriptomic Data},
journal = {J. Comput. Biol.},
volume = {28},
number = {8},
pages = {842--855},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.0053},
doi = {10.1089/CMB.2021.0053},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/RondelHSKMSMPPZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/JhaMRSZ21,
author = {Sumit Kumar Jha and
Ion I. Mandoiu and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {Special Issue: 10th International Computational Advances in Bio and
Medical Sciences {(ICCABS} 2020)},
journal = {J. Comput. Biol.},
volume = {28},
number = {11},
pages = {1033--1034},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.29048.skj},
doi = {10.1089/CMB.2021.29048.SKJ},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/JhaMRSZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MelnykMKSHSZP21,
author = {Andrew Melnyk and
Fatemeh Mohebbi and
Sergey Knyazev and
Bikram Sahoo and
Roya Hosseini and
Pavel Skums and
Alex Zelikovsky and
Murray Patterson},
title = {From Alpha to Zeta: Identifying Variants and Subtypes of SARS-CoV-2
Via Clustering},
journal = {J. Comput. Biol.},
volume = {28},
number = {11},
pages = {1113--1129},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.0302},
doi = {10.1089/CMB.2021.0302},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/MelnykMKSHSZP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/NovikovKGISZ21,
author = {Daniel Novikov and
Sergey Knyazev and
Mark Grinshpon and
Pelin B. Icer and
Pavel Skums and
Alex Zelikovsky},
title = {Scalable Reconstruction of SARS-CoV-2 Phylogeny with Recurrent Mutations},
journal = {J. Comput. Biol.},
volume = {28},
number = {11},
pages = {1130--1141},
year = {2021},
url = {https://doi.org/10.1089/cmb.2021.0306},
doi = {10.1089/CMB.2021.0306},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/NovikovKGISZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/SahooSZ21,
author = {Bikram Sahoo and
Seth Sims and
Alexander Zelikovsky},
editor = {Mukul S. Bansal and
Ion I. Mandoiu and
Marmar Moussa and
Murray Patterson and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {An {SVM} Based Approach to Study the Racial Disparity in Triple-Negative
Breast Cancer},
booktitle = {Computational Advances in Bio and Medical Sciences: 11th International
Conference, {ICCABS} 2021, Virtual Event, December 16-18, 2021, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {13254},
pages = {163--175},
publisher = {Springer International Publishing},
year = {2021},
url = {https://doi.org/10.1007/978-3-031-17531-2\_13},
doi = {10.1007/978-3-031-17531-2\_13},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/SahooSZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KnyazevNGSASHBS21,
author = {Sergey Knyazev and
Daniel Novikov and
Mark Grinshpon and
Harman Singh and
Ram Ayyala and
Varuni Sarwal and
Roya Hosseini and
Pelin Icer Baykal and
Pavel Skums and
Ellsworth Campbell and
Serghei Mangul and
Alex Zelikovsky},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Novel Network Representation of SARS-CoV-2 Sequencing Data},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {165--175},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_15},
doi = {10.1007/978-3-030-91415-8\_15},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KnyazevNGSASHBS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iccabs/2020,
editor = {Sumit Kumar Jha and
Ion I. Mandoiu and
Sanguthevar Rajasekaran and
Pavel Skums and
Alex Zelikovsky},
title = {Computational Advances in Bio and Medical Sciences - 10th International
Conference, {ICCABS} 2020, Virtual Event, December 10-12, 2020, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {12686},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-79290-9},
doi = {10.1007/978-3-030-79290-9},
isbn = {978-3-030-79289-3},
timestamp = {Tue, 20 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccabs/2020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/0001SZ20,
author = {Zhipeng Cai and
Pavel Skums and
Alexander Zelikovsky},
title = {Preface Special Issue: 15th International Symposium on Bioinformatics
Research and Applications {(ISBRA} 2019)},
journal = {J. Comput. Biol.},
volume = {27},
number = {2},
pages = {131--132},
year = {2020},
url = {https://doi.org/10.1089/cmb.2019.29024.zc},
doi = {10.1089/CMB.2019.29024.ZC},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/0001SZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/TsyvinaZSS20,
author = {Viachaslau Tsyvina and
Alex Zelikovsky and
Sagi Snir and
Pavel Skums},
title = {Inference of mutability landscapes of tumors from single cell sequencing
data},
journal = {PLoS Comput. Biol.},
volume = {16},
number = {11},
year = {2020},
url = {https://doi.org/10.1371/journal.pcbi.1008454},
doi = {10.1371/JOURNAL.PCBI.1008454},
timestamp = {Mon, 05 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/TsyvinaZSS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MitchellBMWKCMK20,
author = {Keith Mitchell and
Jaqueline J. Brito and
Igor Mandric and
Qiaozhen Wu and
Sergey Knyazev and
Sei Chang and
Lana S. Martin and
Aaron Karlsberg and
Ekaterina Gerasimov and
Russell Littman and
Brian L. Hill and
Nicholas C. Wu and
Harry (Taegyun) Yang and
Kevin Hsieh and
Linus Chen and
Eli Littman and
Taylor Shabani and
German Enik and
Douglas Yao and
Ren Sun and
Jan Schroeder and
Eleazar Eskin and
Alex Zelikovsky and
Pavel Skums and
Mihai Pop and
Serghei Mangul},
title = {Benchmarking of computational error-correction methods for next-generation
sequencing data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {63:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414209},
doi = {10.1145/3388440.3414209},
timestamp = {Fri, 13 Nov 2020 11:27:35 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MitchellBMWKCMK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MelnykMKSHSZP20,
author = {Andrew Melnyk and
Fatemeh Mohebbi and
Sergey Knyazev and
Bikram Sahoo and
Roya Hosseini and
Pavel Skums and
Alex Zelikovsky and
Murray Patterson},
editor = {Sumit Kumar Jha and
Ion I. Mandoiu and
Sanguthevar Rajasekaran and
Pavel Skums and
Alex Zelikovsky},
title = {Clustering Based Identification of SARS-CoV-2 Subtypes},
booktitle = {Computational Advances in Bio and Medical Sciences - 10th International
Conference, {ICCABS} 2020, Virtual Event, December 10-12, 2020, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {12686},
pages = {127--141},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-79290-9\_11},
doi = {10.1007/978-3-030-79290-9\_11},
timestamp = {Thu, 29 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccabs/MelnykMKSHSZP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RondelHSKMSMPZ20,
author = {Filipp Rondel and
Akram Sadat Hosseini and
Bikram Sahoo and
Sergey Knyazev and
Igor Mandric and
Frank Stewart and
Ion I. Mandoiu and
Bogdan Pasaniuc and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Estimating Enzyme Participation in Metabolic Pathways for Microbial
Communities from RNA-seq Data},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {335--343},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_32},
doi = {10.1007/978-3-030-57821-3\_32},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RondelHSKMSMPZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iccabs/2019,
editor = {Ion I. Mandoiu and
T. M. Murali and
Giri Narasimhan and
Sanguthevar Rajasekaran and
Pavel Skums and
Alexander Zelikovsky},
title = {Computational Advances in Bio and Medical Sciences - 9th International
Conference, {ICCABS} 2019, Miami, FL, USA, November 15-17, 2019, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {12029},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-46165-2},
doi = {10.1007/978-3-030-46165-2},
isbn = {978-3-030-46164-5},
timestamp = {Wed, 29 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccabs/2019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SkumsTZ19,
author = {Pavel Skums and
Viachaslau Tsyvina and
Alex Zelikovsky},
title = {Inference of clonal selection in cancer populations using single-cell
sequencing data},
journal = {Bioinform.},
volume = {35},
number = {14},
pages = {i398--i407},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/btz392},
doi = {10.1093/BIOINFORMATICS/BTZ392},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SkumsTZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CaiSZ19,
author = {Zhipeng Cai and
Pavel Skums and
Alexander Zelikovsky},
title = {Preface: 14th International Symposium on Bioinformatics Research and
Applications {(ISBRA} 2018)},
journal = {J. Comput. Biol.},
volume = {26},
number = {8},
pages = {767--768},
year = {2019},
url = {https://doi.org/10.1089/cmb.2019.29022.zc},
doi = {10.1089/CMB.2019.29022.ZC},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/CaiSZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandoiuSZ19,
author = {Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {16},
number = {4},
pages = {1362--1363},
year = {2019},
url = {https://doi.org/10.1109/TCBB.2019.2894215},
doi = {10.1109/TCBB.2019.2894215},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MandoiuSZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ19,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Workshop on Computational Advances in Molecular Epidemiology},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {561},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343859},
doi = {10.1145/3307339.3343859},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoSZSSSW19,
author = {Fengpan Zhao and
Pavel Skums and
Alex Zelikovsky and
Eric L. Sevigny and
Monica Haavisto Swahn and
Sheryl M. Strasser and
Yubao Wu},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Detecting Illicit Drug Ads in Google+ Using Machine Learning},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {171--179},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_15},
doi = {10.1007/978-3-030-20242-2\_15},
timestamp = {Thu, 20 Aug 2020 15:54:47 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoSZSSSW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerjpre/LaehnemannKSMHR19,
author = {David Laehnemann and
Johannes K{\"{o}}ster and
Ewa Szczurek and
Davis J. McCarthy and
Stephanie C. Hicks and
Mark D. Robinson and
Catalina A. Vallejos and
Niko Beerenwinkel and
Kieran R. Campbell and
Ahmed Mahfouz and
Luca Pinello and
Pavel Skums and
Alexandros Stamatakis and
Camille Stephan{-}Otto Attolini and
Samuel Aparicio and
Jasmijn A. Baaijens and
Marleen Balvert and
Buys de Barbanson and
Antonio Cappuccio and
Giacomo Corleone and
Bas E. Dutilh and
Maria Florescu and
Victor Guryev and
Rens Holmer and
Katharina Jahn and
Thamar Jessurun Lobo and
Emma M. Keizer and
Indu Khatri and
Szymon M. Kielbasa and
Jan O. Korbel and
Alexey M. Kozlov and
Tzu{-}Hao Kuo and
Boudewijn P. F. Lelieveldt and
Ion I. Mandoiu and
John C. Marioni and
Tobias Marschall and
Felix M{\"{o}}lder and
Amir Niknejad and
Lukasz Raczkowski and
Marcel J. T. Reinders and
Jeroen de Ridder and
Antoine{-}Emmanuel Saliba and
Antonios Somarakis and
Oliver Stegle and
Fabian J. Theis and
Huan Yang and
Alex Zelikovsky and
Alice C. McHardy and
Benjamin J. Raphael and
Sohrab P. Shah and
Alexander Sch{\"{o}}nhuth},
title = {12 Grand Challenges in Single-Cell Data Science},
journal = {PeerJ Prepr.},
volume = {7},
pages = {e27885},
year = {2019},
url = {https://doi.org/10.7287/peerj.preprints.27885v3},
doi = {10.7287/PEERJ.PREPRINTS.27885V3},
timestamp = {Thu, 09 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/peerjpre/LaehnemannKSMHR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SkumsZSGDKMRCJB18,
author = {Pavel Skums and
Alex Zelikovsky and
Rahul Singh and
Walker Gussler and
Zoya Dimitrova and
Sergey Knyazev and
Igor Mandric and
Sumathi Ramachandran and
David S. Campo and
Deeptanshu Jha and
Leonid Bunimovich and
Elizabeth Costenbader and
Connie Sexton and
Siobh{\'{a}}n O'Connor and
Guo{-}liang Xia and
Yury Khudyakov},
title = {{QUENTIN:} reconstruction of disease transmissions from viral quasispecies
genomic data},
journal = {Bioinform.},
volume = {34},
number = {1},
pages = {163--170},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/btx402},
doi = {10.1093/BIOINFORMATICS/BTX402},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SkumsZSGDKMRCJB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MandricKZ18,
author = {Igor Mandric and
Sergey Knyazev and
Alex Zelikovsky},
title = {Repeat-aware evaluation of scaffolding tools},
journal = {Bioinform.},
volume = {34},
number = {15},
pages = {2530--2537},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/bty131},
doi = {10.1093/BIOINFORMATICS/BTY131},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MandricKZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SimsLCRMGLSTZK18,
author = {Seth Sims and
Atkinson G. Longmire and
David S. Campo and
Sumathi Ramachandran and
Magdalena Medrzycki and
Lilia Ganova{-}Raeva and
Yulin Lin and
Amanda Sue and
Hong Thai and
Alexander Zelikovsky and
Yury Khudyakov},
title = {Automated quality control for a molecular surveillance system},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {11},
pages = {358:1--358:15},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2329-5},
doi = {10.1186/S12859-018-2329-5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SimsLCRMGLSTZK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TsyvinaCSZKS18,
author = {Viachaslau Tsyvina and
David S. Campo and
Seth Sims and
Alex Zelikovsky and
Yury Khudyakov and
Pavel Skums},
title = {Fast estimation of genetic relatedness between members of heterogeneous
populations of closely related genomic variants},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {11},
pages = {360:1--360:10},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2333-9},
doi = {10.1186/S12859-018-2333-9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TsyvinaCSZKS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CaiSZ18,
author = {Zhipeng Cai and
Pavel Skums and
Alexander Zelikovsky},
title = {\emph{Special Issue}Preface: 13th International Symposium on BioinformaticsResearch
and Applications {(ISBRA} 2017)},
journal = {J. Comput. Biol.},
volume = {25},
number = {3},
pages = {251--252},
year = {2018},
url = {https://doi.org/10.1089/cmb.2018.29012.zc},
doi = {10.1089/CMB.2018.29012.ZC},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/CaiSZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ18,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ACM-BCB} 2018 Computational Advances in Molecular Epidemiology {(CAME)}
Chairs' Welcome},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {574},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233670},
doi = {10.1145/3233547.3233670},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dac/HanKMZ18,
author = {Kwangsoo Han and
Andrew B. Kahng and
Christopher Moyes and
Alex Zelikovsky},
editor = {Shiyan Hu},
title = {A study of optimal cost-skew tradeoff and remaining suboptimality
in interconnect tree constructions},
booktitle = {Proceedings of the 20th System Level Interconnect Prediction Workshop,
SLIP@DAC 2018, San Francisco, CA, USA, June 23, 2018},
pages = {2:1--2:8},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3225209.3225215},
doi = {10.1145/3225209.3225215},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dac/HanKMZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuSZRL18,
author = {Yubao Wu and
Pavel Skums and
Alex Zelikovsky and
David Stiven Campo Rendon and
Xueting Liao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Predicting Opioid Epidemic by Using Twitter Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {314--318},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_30},
doi = {10.1007/978-3-319-94968-0\_30},
timestamp = {Thu, 20 Aug 2020 15:55:45 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuSZRL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/tf/18/KahngMZ18,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Teofilo F. Gonzalez},
title = {Practical Approximations of Steiner Trees in Uniform Orientation Metrics},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics, Second Edition,
Volume 1: Methologies and Traditional Applications},
pages = {657--669},
publisher = {Chapman and Hall/CRC},
year = {2018},
url = {https://doi.org/10.1201/9781351236423-37},
doi = {10.1201/9781351236423-37},
timestamp = {Mon, 28 Oct 2019 16:49:19 +0100},
biburl = {https://dblp.org/rec/books/tf/18/KahngMZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/tf/18/MandoiuOZ18,
author = {Ion I. Mandoiu and
Alex Olshevsky and
Alexander Zelikovsky},
editor = {Teofilo F. Gonzalez},
title = {QoS Multimedia Multicast Routing},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics, Second Edition,
Volume 2: Contemporary and Emerging Applications},
publisher = {Chapman and Hall/CRC},
year = {2018},
timestamp = {Mon, 28 Oct 2019 16:49:19 +0100},
biburl = {https://dblp.org/rec/books/tf/18/MandoiuOZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cocoa/2018,
editor = {Donghyun Kim and
R. N. Uma and
Alexander Zelikovsky},
title = {Combinatorial Optimization and Applications - 12th International Conference,
{COCOA} 2018, Atlanta, GA, USA, December 15-17, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11346},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-04651-4},
doi = {10.1007/978-3-030-04651-4},
isbn = {978-3-030-04650-7},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cocoa/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MandricTSSZM17,
author = {Igor Mandric and
Yvette Temate{-}Tiagueu and
Tatiana Shcheglova and
Sahar Al Seesi and
Alex Zelikovsky and
Ion I. Mandoiu},
title = {Fast bootstrapping-based estimation of confidence intervals of expression
levels and differential expression from RNA-Seq data},
journal = {Bioinform.},
volume = {33},
number = {20},
pages = {3302--3304},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btx365},
doi = {10.1093/BIOINFORMATICS/BTX365},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MandricTSSZM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GerasimovZMI17,
author = {Ekaterina Gerasimov and
Alex Zelikovsky and
Ion I. Mandoiu and
Yurij Ionov},
title = {Identification of cancer-specific motifs in mimotope profiles of serum
antibody repertoire},
journal = {{BMC} Bioinform.},
volume = {18},
number = {8},
pages = {244:1--244:6},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1661-5},
doi = {10.1186/S12859-017-1661-5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GerasimovZMI17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ArtyomenkoWMESZ17,
author = {Alexander Artyomenko and
Nicholas C. Wu and
Serghei Mangul and
Eleazar Eskin and
Ren Sun and
Alex Zelikovsky},
title = {Long Single-Molecule Reads Can Resolve the Complexity of the Influenza
Virus Composed of Rare, Closely Related Mutant Variants},
journal = {J. Comput. Biol.},
volume = {24},
number = {6},
pages = {558--570},
year = {2017},
url = {https://doi.org/10.1089/cmb.2016.0146},
doi = {10.1089/CMB.2016.0146},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ArtyomenkoWMESZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HarrisonMZ17,
author = {Robert W. Harrison and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {14},
number = {3},
pages = {576--577},
year = {2017},
url = {https://doi.org/10.1109/TCBB.2017.2673738},
doi = {10.1109/TCBB.2017.2673738},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/HarrisonMZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ17,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{CAME} 2017: 6th Workshop on Computational Advances in Molecular Epidemiology},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {775},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108168},
doi = {10.1145/3107411.3108168},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/BasodiISKZ017,
author = {Sunitha Basodi and
Pelin Burcak Icer and
Pavel Skums and
Yury Khudyakov and
Alexander Zelikovsky and
Yi Pan},
title = {Classification of {HCV} infections through sequence image normalization},
booktitle = {7th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2017, Orlando, FL, USA, October 19-21,
2017},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/ICCABS.2017.8114313},
doi = {10.1109/ICCABS.2017.8114313},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccabs/BasodiISKZ017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/BaykalARKZS17,
author = {Pelin Icer Baykal and
Alexander Artyomenko and
Sumathi Ramachandran and
Yury Khudyakov and
Alex Zelikovsky and
Pavel Skums},
title = {Assessment of {HCV} infection stage as recent or chronic using multi-parameter
analysis and machine learning},
booktitle = {7th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2017, Orlando, FL, USA, October 19-21,
2017},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/ICCABS.2017.8114316},
doi = {10.1109/ICCABS.2017.8114316},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/BaykalARKZS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/TsyvinaCSZKS17,
author = {Viachaslau Tsyvina and
David S. Campo and
Seth Sims and
Alex Zelikovsky and
Yury Khudyakov and
Pavel Skums},
title = {Efficient filtering algorithm for detection of genetic similarity
between large genomic datasets},
booktitle = {7th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2017, Orlando, FL, USA, October 19-21,
2017},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/ICCABS.2017.8114318},
doi = {10.1109/ICCABS.2017.8114318},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/TsyvinaCSZKS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MandricKPSMZ17,
author = {Igor Mandric and
Sergey Knyazev and
Cory Padilla and
Frank Stewart and
Ion I. Mandoiu and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {396--402},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_41},
doi = {10.1007/978-3-319-59575-7\_41},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MandricKPSMZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ArtyomenkoISRKZ17,
author = {Alexander Artyomenko and
Pelin B. Icer and
Pavel Skums and
Sumathi Ramachandran and
Yury Khudyakov and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Agent-Based in Silico Evolution of {HCV} Quasispecies},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {420--424},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_45},
doi = {10.1007/978-3-319-59575-7\_45},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ArtyomenkoISRKZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JhaSZKS17,
author = {Deeptanshu Jha and
Pavel Skums and
Alex Zelikovsky and
Yury Khudyakov and
Rahul Singh},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Modeling the Spread of {HIV} and {HCV} Infections Based on Identification
and Characterization of High-Risk Communities Using Social Media},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {425--430},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_46},
doi = {10.1007/978-3-319-59575-7\_46},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/JhaSZKS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/CaiZ16,
author = {Zhipeng Cai and
Alexander Zelikovsky},
title = {Computing and Combinatorics},
journal = {Algorithmica},
volume = {76},
number = {4},
pages = {865--866},
year = {2016},
url = {https://doi.org/10.1007/s00453-016-0176-1},
doi = {10.1007/S00453-016-0176-1},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/CaiZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/CaiZ16,
author = {Zhipeng Cai and
Alexander Zelikovsky},
title = {Special issue on Computing and Combinatorics Conference},
journal = {Theor. Comput. Sci.},
volume = {609},
pages = {515},
year = {2016},
url = {https://doi.org/10.1016/j.tcs.2015.11.020},
doi = {10.1016/J.TCS.2015.11.020},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/CaiZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MangulYHTZE16,
author = {Serghei Mangul and
Harry (Taegyun) Yang and
Farhad Hormozdiari and
Elizabeth Tseng and
Alex Zelikovsky and
Eleazar Eskin},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction
from Long Single-Molecule Reads},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {80--92},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_7},
doi = {10.1007/978-3-319-38782-6\_7},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MangulYHTZE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ArtyomenkoWMESZ16,
author = {Alexander Artyomenko and
Nicholas C. Wu and
Serghei Mangul and
Eleazar Eskin and
Ren Sun and
Alex Zelikovsky},
editor = {Mona Singh},
title = {Long Single-Molecule Reads Can Resolve the Complexity of the Influenza
Virus Composed of Rare, Closely Related Mutant Variants},
booktitle = {Research in Computational Molecular Biology - 20th Annual Conference,
{RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9649},
pages = {164--175},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-31957-5\_12},
doi = {10.1007/978-3-319-31957-5\_12},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/ArtyomenkoWMESZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2016,
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6},
doi = {10.1007/978-3-319-38782-6},
isbn = {978-3-319-38781-9},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2016.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SkumsAGRMCDZK15,
author = {Pavel Skums and
Alexander Artyomenko and
Olga Glebova and
Sumathi Ramachandran and
Ion I. Mandoiu and
David S. Campo and
Zoya Dimitrova and
Alex Zelikovsky and
Yuri Khudyakov},
title = {Computational framework for next-generation sequencing of heterogeneous
viral populations using combinatorial pooling},
journal = {Bioinform.},
volume = {31},
number = {5},
pages = {682--690},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btu726},
doi = {10.1093/BIOINFORMATICS/BTU726},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SkumsAGRMCDZK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MandricZ15,
author = {Igor Mandric and
Alex Zelikovsky},
title = {ScaffMatch: scaffolding algorithm based on maximum weight matching},
journal = {Bioinform.},
volume = {31},
number = {16},
pages = {2632--2638},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv211},
doi = {10.1093/BIOINFORMATICS/BTV211},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MandricZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/DingWZGXP15,
author = {Xiaojun Ding and
Jianxin Wang and
Alex Zelikovsky and
Xuan Guo and
Minzhu Xie and
Yi Pan},
title = {Searching High-Order {SNP} Combinations for Complex Diseases Based
on Energy Distribution Difference},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {3},
pages = {695--704},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2014.2363459},
doi = {10.1109/TCBB.2014.2363459},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/DingWZGXP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ArtyomenkoWMESZ15,
author = {Alexander Artyomenko and
Nicholas C. Wu and
Serghei Mangul and
Eleazar Eskin and
Ren Sun and
Alex Zelikovsky},
title = {2SNV: Quasispecies reconstruction from PacBio reads},
booktitle = {5th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2015, Miami, FL, USA, October 15-17,
2015},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/ICCABS.2015.7344730},
doi = {10.1109/ICCABS.2015.7344730},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/ArtyomenkoWMESZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/NenastyevaZIM15,
author = {Ekaterina Nenastyeva and
Alex Zelikovsky and
Yurij Ionov and
Ion I. Mandoiu},
title = {Identification of cancer-specific motifs in mimotope profiles of serum
antibody repertoire},
booktitle = {5th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2015, Miami, FL, USA, October 15-17,
2015},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/ICCABS.2015.7344724},
doi = {10.1109/ICCABS.2015.7344724},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/NenastyevaZIM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/SkumsGCLDSBZK15,
author = {Pavel Skums and
Olga Glebova and
David S. Campo and
Nana Li and
Zoya Dimitrova and
Seth Sims and
Leonid Bunimovich and
Alex Zelikovsky and
Yury Khudyakov},
title = {Algorithms for prediction of viral transmission using analysis of
intra-host viral populations},
booktitle = {5th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2015, Miami, FL, USA, October 15-17,
2015},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/ICCABS.2015.7344725},
doi = {10.1109/ICCABS.2015.7344725},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/SkumsGCLDSBZK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/YuGZP15,
author = {Ning Yu and
Xuan Guo and
Alexander Zelikovsky and
Yi Pan},
title = {GaussianCpG: {A} Gaussian model for detection of human CpG island},
booktitle = {5th {IEEE} International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2015, Miami, FL, USA, October 15-17,
2015},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/ICCABS.2015.7344717},
doi = {10.1109/ICCABS.2015.7344717},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/YuGZP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MandricZ15,
author = {Igor Mandric and
Alex Zelikovsky},
editor = {Teresa M. Przytycka},
title = {ScaffMatch: Scaffolding Algorithm Based on Maximum Weight Matching},
booktitle = {Research in Computational Molecular Biology - 19th Annual International
Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9029},
pages = {222--223},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-16706-0\_22},
doi = {10.1007/978-3-319-16706-0\_22},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MandricZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MangulWMZSE14,
author = {Serghei Mangul and
Nicholas C. Wu and
Nicholas Mancuso and
Alex Zelikovsky and
Ren Sun and
Eleazar Eskin},
title = {Accurate viral population assembly from ultra-deep sequencing data},
journal = {Bioinform.},
volume = {30},
number = {12},
pages = {329--337},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btu295},
doi = {10.1093/BIOINFORMATICS/BTU295},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MangulWMZSE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LindsaySMZ14,
author = {James Lindsay and
Hamed Salooti and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {ILP-based maximum likelihood genome scaffolding},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-9}},
pages = {S9},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S9-S9},
doi = {10.1186/1471-2105-15-S9-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LindsaySMZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ArtyomenkoMWESZ14,
author = {Alexander Artyomenko and
Serghei Mangul and
Nicholas C. Wu and
Eleazar Eskin and
Ren Sun and
Alex Zelikovsky},
title = {Reconstruction of influenza a virus variants from PacBio reads},
booktitle = {{IEEE} 4th International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2014, Miami, FL, USA, June 2-4, 2014},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/ICCABS.2014.6863935},
doi = {10.1109/ICCABS.2014.6863935},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/ArtyomenkoMWESZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/CaciulaGAMLMZ14,
author = {Adrian Caciula and
Olga Glebova and
Alexander Artyomenko and
Serghei Mangul and
James Lindsay and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {Deterministic regression algorithm for transcriptome frequency estimation},
booktitle = {{IEEE} 4th International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2014, Miami, FL, USA, June 2-4, 2014},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/ICCABS.2014.6863946},
doi = {10.1109/ICCABS.2014.6863946},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/CaciulaGAMLMZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MandricLMZ14,
author = {Igor Mandric and
James Lindsay and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {{SILP3:} Maximum likelihood approach to scaffolding},
booktitle = {{IEEE} 4th International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2014, Miami, FL, USA, June 2-4, 2014},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/ICCABS.2014.6863940},
doi = {10.1109/ICCABS.2014.6863940},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MandricLMZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MangulWMZSE14,
author = {Serghei Mangul and
Nicholas C. Wu and
Nicholas Mancuso and
Alex Zelikovsky and
Ren Sun and
Eleazar Eskin},
title = {{VGA:} {A} method for viral quasispecies assembly from ultra-deep
sequencing data},
booktitle = {{IEEE} 4th International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2014, Miami, FL, USA, June 2-4, 2014},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/ICCABS.2014.6863932},
doi = {10.1109/ICCABS.2014.6863932},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MangulWMZSE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/SkumsAGZCDK14,
author = {Pavel Skums and
Alexander Artyomenko and
Olga Glebova and
Alex Zelikovsky and
David S. Campo and
Zoya Dimitrova and
Yuri Khudyakov},
title = {Detection of genetic relatedness between viral samples using EM-based
clustering of next-generation sequencing data},
booktitle = {{IEEE} 4th International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2014, Miami, FL, USA, June 2-4, 2014},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/ICCABS.2014.6863938},
doi = {10.1109/ICCABS.2014.6863938},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/SkumsAGZCDK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cocoon/2014,
editor = {Zhipeng Cai and
Alex Zelikovsky and
Anu G. Bourgeois},
title = {Computing and Combinatorics - 20th International Conference, {COCOON}
2014, Atlanta, GA, USA, August 4-6, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8591},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08783-2},
doi = {10.1007/978-3-319-08783-2},
isbn = {978-3-319-08782-5},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/2014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SkumsMATMKZ13,
author = {Pavel Skums and
Nicholas Mancuso and
Alexander Artyomenko and
Bassam Tork and
Ion I. Mandoiu and
Yuri Khudyakov and
Alex Zelikovsky},
title = {Reconstruction of viral population structure from next-generation
sequencing data using multicommodity flows},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-9}},
pages = {S2},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S9-S2},
doi = {10.1186/1471-2105-14-S9-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SkumsMATMKZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijnc/AlsulaimanPZ13,
author = {Thamer Alsulaiman and
Sushil K. Prasad and
Alexander Zelikovsky},
title = {Distributed Algorithms for {TDMA} Link Scheduling in Sensor Networks},
journal = {Int. J. Netw. Comput.},
volume = {3},
number = {1},
pages = {55--74},
year = {2013},
url = {http://www.ijnc.org/index.php/ijnc/article/view/53},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijnc/AlsulaimanPZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandoiuWZ13,
author = {Ion I. Mandoiu and
Jianxin Wang and
Alexander Zelikovsky},
title = {Guest Editors' introduction to the special section on bioinformatics
research and applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {10},
number = {6},
pages = {1345--1346},
year = {2013},
url = {https://doi.org/10.1109/TCBB.2013.189},
doi = {10.1109/TCBB.2013.189},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MandoiuWZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ArtyomenkoMZSM13,
author = {Alexander Artyomenko and
Nicholas Mancuso and
Alex Zelikovsky and
Pavel Skums and
Ion I. Mandoiu},
title = {kGEM: An EM-based algorithm for local reconstruction of viral quasispecies},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629226},
doi = {10.1109/ICCABS.2013.6629226},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/ArtyomenkoMZSM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/CaciulaZMLM13,
author = {Adrian Caciula and
Alex Zelikovsky and
Serghei Mangul and
James Lindsay and
Ion I. Mandoiu},
title = {Monte-Carlo Regression algorithm for isoform frequency estimation
from RNA-Seq data},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629228},
doi = {10.1109/ICCABS.2013.6629228},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/CaciulaZMLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/IlieZM13,
author = {Gabriel Ilie and
Alex Zelikovsky and
Ion I. Mandoiu},
title = {Reference assisted nucleic acid sequence reconstruction from mass
spectrometry data},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629232},
doi = {10.1109/ICCABS.2013.6629232},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/IlieZM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MancusoAZSM13,
author = {Nicholas Mancuso and
Alexander Artyomenko and
Alex Zelikovsky and
Pavel Skums and
Ion I. Mandoiu},
title = {Estimation of viral population structure from amplicon-based reads},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629224},
doi = {10.1109/ICCABS.2013.6629224},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MancusoAZSM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MangulSMCZB13,
author = {Serghei Mangul and
Sahar Al Seesi and
Ion I. Mandoiu and
Adrian Caciula and
Alex Zelikovsky and
Dumitru Brinza},
title = {Transcriptome assembly and quantification from Ion Torrent RNA-Seq
data},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629235},
doi = {10.1109/ICCABS.2013.6629235},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MangulSMCZB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/SkumsGZMK13,
author = {Pavel Skums and
Olga Glebova and
Alex Zelikovsky and
Ion I. Mandoiu and
Yuri Khudyakov},
title = {Optimizing pooling strategies for the massive next-generation sequencing
of viral samples},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629230},
doi = {10.1109/ICCABS.2013.6629230},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/SkumsGZMK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SkumsGZDRGK13,
author = {Pavel Skums and
Olga Glebova and
Alex Zelikovsky and
Zoya Dimitrova and
David Stiven Campo Rendon and
Lilia Ganova{-}Raeva and
Yuri Khudyakov},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Alignment of {DNA} Mass-Spectral Profiles Using Network Flows},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {149--160},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_17},
doi = {10.1007/978-3-642-38036-5\_17},
timestamp = {Thu, 20 Aug 2020 15:56:19 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SkumsGZDRGK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/CalinescuFKZ12,
author = {Gruia C{\u{a}}linescu and
Cristina G. Fernandes and
Hemanshu Kaul and
Alexander Zelikovsky},
title = {Maximum Series-Parallel Subgraph},
journal = {Algorithmica},
volume = {63},
number = {1-2},
pages = {137--157},
year = {2012},
url = {https://doi.org/10.1007/s00453-011-9523-4},
doi = {10.1007/S00453-011-9523-4},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/CalinescuFKZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenMSWZ12,
author = {Jianer Chen and
Ion I. Mandoiu and
Raj Sunderraman and
Jianxin Wang and
Alexander Zelikovsky},
title = {Guest Editors' Introduction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S1},
doi = {10.1186/1471-2105-13-S10-S1},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenMSWZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SkumsDCVRFYZK12,
author = {Pavel Skums and
Zoya Dimitrova and
David S. Campo and
Gilberto Vaughan and
Livia Rossi and
Joseph C. Forbi and
Jonny Yokosawa and
Alex Zelikovsky and
Yuri Khudyakov},
title = {Efficient error correction for next-generation sequencing of viral
amplicons},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S6},
doi = {10.1186/1471-2105-13-S10-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SkumsDCVRFYZK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MangulCBMZ12,
author = {Serghei Mangul and
Adrian Caciula and
Dumitru Brinza and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {{TRIP:} a method for novel transcript reconstruction from paired-end
RNA-seq reads},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A11},
doi = {10.1186/1471-2105-13-S18-A11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MangulCBMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/MancusoTSGMZ12,
author = {Nicholas Mancuso and
Bassam Tork and
Pavel Skums and
Lilia Ganova{-}Raeva and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {Reconstructing viral quasispecies from {NGS} amplicon reads},
journal = {Silico Biol.},
volume = {11},
number = {5-6},
pages = {237--249},
year = {2012},
url = {https://doi.org/10.3233/ISB-2012-0458},
doi = {10.3233/ISB-2012-0458},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/MancusoTSGMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/MangulCGMZ12,
author = {Serghei Mangul and
Adrian Caciula and
Olga Glebova and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {Improved transcriptome quantification and reconstruction from RNA-Seq
reads using partial annotations},
journal = {Silico Biol.},
volume = {11},
number = {5-6},
pages = {251--261},
year = {2012},
url = {https://doi.org/10.3233/ISB-2012-0459},
doi = {10.3233/ISB-2012-0459},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/MangulCGMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChenZ12,
author = {Jianer Chen and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {9},
number = {4},
pages = {1002--1003},
year = {2012},
url = {https://doi.org/10.1109/TCBB.2012.77},
doi = {10.1109/TCBB.2012.77},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChenZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LindsaySZM12,
author = {James Lindsay and
Hamed Salooti and
Alexander Zelikovsky and
Ion I. Mandoiu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Scalable genome scaffolding using integer linear programming},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {377--383},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382984},
doi = {10.1145/2382936.2382984},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LindsaySZM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/LindsayMSZ12,
author = {James Lindsay and
Ion I. Mandoiu and
Hamed Salooti and
Alexander Zelikovsky},
editor = {Sorin Istrail and
Ion I. Mandoiu and
Mihai Pop and
Sanguthevar Rajasekaran and
John L. Spouge},
title = {Poster: Accurate scaffolding of large genomes using integer programming
and Non-Serial Dynamic Programming},
booktitle = {{IEEE} 2nd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
23-25, 2012},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/ICCABS.2012.6182653},
doi = {10.1109/ICCABS.2012.6182653},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/LindsayMSZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MancusoTSGMZ12,
author = {Nicholas Mancuso and
Bassam Tork and
Pavel Skums and
Lilia Ganova{-}Raeva and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Sorin Istrail and
Ion I. Mandoiu and
Mihai Pop and
Sanguthevar Rajasekaran and
John L. Spouge},
title = {Workshop: {A} maximum likelihood method for quasispecies spectrum
assembly},
booktitle = {{IEEE} 2nd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
23-25, 2012},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/ICCABS.2012.6182672},
doi = {10.1109/ICCABS.2012.6182672},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MancusoTSGMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MangulCMZ12,
author = {Serghei Mangul and
Adrian Caciula and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Sorin Istrail and
Ion I. Mandoiu and
Mihai Pop and
Sanguthevar Rajasekaran and
John L. Spouge},
title = {Workshop: Novel transcript reconstruction from paired-end RNA-Seq
reads using fragment length distribution},
booktitle = {{IEEE} 2nd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
23-25, 2012},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/ICCABS.2012.6182673},
doi = {10.1109/ICCABS.2012.6182673},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MangulCMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ONeillMKOWBTMZ12,
author = {Rachel J. O'Neill and
Ion I. Mandoiu and
Mazhar I. Khan and
Craig Obergfell and
Hongjun Wang and
Andrew Bligh and
Bassam Tork and
Nicholas Mancuso and
Alexander Zelikovsky},
editor = {Sorin Istrail and
Ion I. Mandoiu and
Mihai Pop and
Sanguthevar Rajasekaran and
John L. Spouge},
title = {Workshop: Bioinformatics methods for reconstruction of Infectious
Bronchitis Virus quasispecies from next generation sequencing data},
booktitle = {{IEEE} 2nd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
23-25, 2012},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/ICCABS.2012.6182674},
doi = {10.1109/ICCABS.2012.6182674},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/ONeillMKOWBTMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/AlsulaimanPZ12,
author = {Thamer Alsulaiman and
Sushil K. Prasad and
Alexander Zelikovsky},
title = {Distributed Algorithms for {TDMA} Link Scheduling in Sensor Networks},
booktitle = {26th {IEEE} International Parallel and Distributed Processing Symposium
Workshops {\&} PhD Forum, {IPDPS} 2012, Shanghai, China, May 21-25,
2012},
pages = {839--847},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/IPDPSW.2012.103},
doi = {10.1109/IPDPSW.2012.103},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/AlsulaimanPZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/NicolaeMMZ11,
author = {Marius Nicolae and
Serghei Mangul and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {Estimation of alternative splicing isoform frequencies from RNA-Seq
data},
journal = {Algorithms Mol. Biol.},
volume = {6},
pages = {9},
year = {2011},
url = {https://doi.org/10.1186/1748-7188-6-9},
doi = {10.1186/1748-7188-6-9},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/NicolaeMMZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AstrovskayaTMWMBZ11,
author = {Irina Astrovskaya and
Bassam Tork and
Serghei Mangul and
Kelly Westbrooks and
Ion I. Mandoiu and
Peter Balfe and
Alex Zelikovsky},
title = {Inferring viral quasispecies spectra from 454 pyrosequencing reads},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-6}},
pages = {S1},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S6-S1},
doi = {10.1186/1471-2105-12-S6-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AstrovskayaTMWMBZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijkdb/ChengZ11,
author = {Qiong Cheng and
Alexander Zelikovsky},
title = {Combinatorial Optimization Algorithms for Metabolic Networks Alignments
and Their Applications},
journal = {Int. J. Knowl. Discov. Bioinform.},
volume = {2},
number = {1},
pages = {1--23},
year = {2011},
url = {https://doi.org/10.4018/jkdb.2011010101},
doi = {10.4018/JKDB.2011010101},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijkdb/ChengZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/informs/PasaniucGMZ11,
author = {Bogdan Pasaniuc and
Robert S. Garfinkel and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Optimal Testing of Digital Microfluidic Biochips},
journal = {{INFORMS} J. Comput.},
volume = {23},
number = {4},
pages = {518--529},
year = {2011},
url = {https://doi.org/10.1287/ijoc.1100.0422},
doi = {10.1287/IJOC.1100.0422},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/informs/PasaniucGMZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BorodovskyPRZ11,
author = {Mark Borodovsky and
Teresa M. Przytycka and
Sanguthevar Rajasekaran and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {4},
pages = {865--866},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2011.92},
doi = {10.1109/TCBB.2011.92},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/BorodovskyPRZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/MancusoTSMZ11,
author = {Nicholas Mancuso and
Bassam Tork and
Pavel Skums and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Viral quasispecies reconstruction from amplicon 454 pyrosequencing
reads},
booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
pages = {94--101},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/BIBMW.2011.6112360},
doi = {10.1109/BIBMW.2011.6112360},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/MancusoTSMZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/MangulCMZ11,
author = {Serghei Mangul and
Adrian Caciula and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {RNA-Seq based discovery and reconstruction of unannotated transcripts
in partially annotated genomes},
booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
pages = {118--123},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/BIBMW.2011.6112363},
doi = {10.1109/BIBMW.2011.6112363},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/MangulCMZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/Zelikovsky11,
author = {Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Satoru Miyano and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Invited: Metabolic network alignments},
booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
2011},
pages = {12},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICCABS.2011.5729864},
doi = {10.1109/ICCABS.2011.5729864},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/Zelikovsky11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/AstrovskayaTMWMBZ11,
author = {Irina Astrovskaya and
Bassam Tork and
Serghei Mangul and
Kelly Westbrooks and
Ion I. Mandoiu and
Peter Balfe and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Satoru Miyano and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Poster: ViSpA: Viral spectrum assembling method},
booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
2011},
pages = {234},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICCABS.2011.5729888},
doi = {10.1109/ICCABS.2011.5729888},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/AstrovskayaTMWMBZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/LindsayZFWMOSBZ11,
author = {James Lindsay and
J. Zhang and
T. Farnham and
Y. Wu and
Ion I. Mandoiu and
Rachel J. O'Neill and
Hamed Salooti and
E. Bullwinkel and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Satoru Miyano and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Poster: Scaffolding draft genomes using paired sequencing data},
booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
2011},
pages = {252},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICCABS.2011.5729905},
doi = {10.1109/ICCABS.2011.5729905},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/LindsayZFWMOSBZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/MangulZ11,
author = {Serghei Mangul and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Satoru Miyano and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Poster: Haplotype discovery from high-throughput sequencing data},
booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
2011},
pages = {255},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICCABS.2011.5729908},
doi = {10.1109/ICCABS.2011.5729908},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/MangulZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/msn/ShiSXZY11,
author = {Lei Shi and
Wen{-}Zhan Song and
Mingsen Xu and
Alex Zelikovsky and
Li Yu},
editor = {Junliang Chen and
Huadong Ma and
Ivan Stojmenovic},
title = {Collaborative Topology Control for Lifetime Maximization},
booktitle = {Seventh International Conference on Mobile Ad-hoc and Sensor Networks,
{MSN} 2011, Beijing, China, December 16-18, 2011},
pages = {182--189},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/MSN.2011.26},
doi = {10.1109/MSN.2011.26},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/msn/ShiSXZY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/MangulANTMZ11,
author = {Serghei Mangul and
Irina Astrovskaya and
Marius Nicolae and
Bassam Tork and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Teresa M. Przytycka and
Marie{-}France Sagot},
title = {Maximum Likelihood Estimation of Incomplete Genomic Spectrum from
{HTS} Data},
booktitle = {Algorithms in Bioinformatics - 11th International Workshop, {WABI}
2011, Saarbr{\"{u}}cken, Germany, September 5-7, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6833},
pages = {213--224},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-23038-7\_19},
doi = {10.1007/978-3-642-23038-7\_19},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/MangulANTMZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2011,
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4},
doi = {10.1007/978-3-642-21260-4},
isbn = {978-3-642-21259-8},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/ChengOWZ10,
author = {Qiong Cheng and
Mitsunori Ogihara and
Jinpeng Wei and
Alexander Zelikovsky},
editor = {Jimmy X. Huang and
Nick Koudas and
Gareth J. F. Jones and
Xindong Wu and
Kevyn Collins{-}Thompson and
Aijun An},
title = {WS-GraphMatching: a web service tool for graph matching},
booktitle = {Proceedings of the 19th {ACM} Conference on Information and Knowledge
Management, {CIKM} 2010, Toronto, Ontario, Canada, October 26-30,
2010},
pages = {1949--1950},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1871437.1871779},
doi = {10.1145/1871437.1871779},
timestamp = {Wed, 03 Aug 2022 15:48:33 +0200},
biburl = {https://dblp.org/rec/conf/cikm/ChengOWZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/ChengWZO10,
author = {Qiong Cheng and
Jinpeng Wei and
Alexander Zelikovsky and
Mitsunori Ogihara},
editor = {Wei Fan and
Wynne Hsu and
Geoffrey I. Webb and
Bing Liu and
Chengqi Zhang and
Dimitrios Gunopulos and
Xindong Wu},
title = {Fixed-Parameter Tractable Combinatorial Algorithms for Metabolic Networks
Alignments},
booktitle = {{ICDMW} 2010, The 10th {IEEE} International Conference on Data Mining
Workshops, Sydney, Australia, 13 December 2010},
pages = {679--686},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/ICDMW.2010.179},
doi = {10.1109/ICDMW.2010.179},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/ChengWZO10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/ChengBHZ10,
author = {Qiong Cheng and
Piotr Berman and
Robert W. Harrison and
Alexander Zelikovsky},
editor = {Wei Fan and
Wynne Hsu and
Geoffrey I. Webb and
Bing Liu and
Chengqi Zhang and
Dimitrios Gunopulos and
Xindong Wu},
title = {Efficient Alignments of Metabolic Networks with Bounded Treewidth},
booktitle = {{ICDMW} 2010, The 10th {IEEE} International Conference on Data Mining
Workshops, Sydney, Australia, 13 December 2010},
pages = {687--694},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/ICDMW.2010.150},
doi = {10.1109/ICDMW.2010.150},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/ChengBHZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/BermanKZ10,
author = {Piotr Berman and
Marek Karpinski and
Alexander Zelikovsky},
editor = {Otfried Cheong and
Kyung{-}Yong Chwa and
Kunsoo Park},
title = {A 3/2-Approximation Algorithm for Generalized Steiner Trees in Complete
Graphs with Edge Lengths 1 and 2},
booktitle = {Algorithms and Computation - 21st International Symposium, {ISAAC}
2010, Jeju Island, Korea, December 15-17, 2010, Proceedings, Part
{I}},
series = {Lecture Notes in Computer Science},
volume = {6506},
pages = {15--24},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-17517-6\_4},
doi = {10.1007/978-3-642-17517-6\_4},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/BermanKZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/NicolaeMMZ10,
author = {Marius Nicolae and
Serghei Mangul and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Vincent Moulton and
Mona Singh},
title = {Estimation of Alternative Splicing isoform Frequencies from RNA-Seq
Data},
booktitle = {Algorithms in Bioinformatics, 10th International Workshop, {WABI}
2010, Liverpool, UK, September 6-8, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6293},
pages = {202--214},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15294-8\_17},
doi = {10.1007/978-3-642-15294-8\_17},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/NicolaeMMZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/NicolaeMMZ10,
author = {Marius Nicolae and
Serghei Mangul and
Ion I. Mandoiu and
Alex Zelikovsky},
editor = {Alberto Apostolico and
Andreas W. M. Dress and
Laxmi Parida},
title = {Estimation of alternative splicing isoform frequencies from RNA-Seq
data},
booktitle = {Structure Discovery in Biology: Motifs, Networks {\&} Phylogenies,
06.06. - 11.06.2010},
series = {Dagstuhl Seminar Proceedings},
volume = {10231},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik, Germany},
year = {2010},
url = {http://drops.dagstuhl.de/opus/volltexte/2010/2687/},
timestamp = {Thu, 10 Jun 2021 13:02:05 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/NicolaeMMZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChengHZ09,
author = {Qiong Cheng and
Robert W. Harrison and
Alexander Zelikovsky},
title = {MetNetAligner: a web service tool for metabolic network alignments},
journal = {Bioinform.},
volume = {25},
number = {15},
pages = {1989--1990},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp287},
doi = {10.1093/BIOINFORMATICS/BTP287},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChengHZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandoiuPSZ09,
author = {Ion I. Mandoiu and
Yi Pan and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {6},
number = {2},
pages = {178--179},
year = {2009},
url = {https://doi.org/10.1109/TCBB.2009.45},
doi = {10.1109/TCBB.2009.45},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MandoiuPSZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/globecom/CaoWZ09,
author = {Xiaojun Cao and
Yichuan Wang and
Alex Zelikovsky},
title = {Scheduling Bursts Using Interval Graphs in Optical Burst Switching
Networks},
booktitle = {Proceedings of the Global Communications Conference, 2009. {GLOBECOM}
2009, Honolulu, Hawaii, USA, 30 November - 4 December 2009},
pages = {1--6},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/GLOCOM.2009.5426139},
doi = {10.1109/GLOCOM.2009.5426139},
timestamp = {Fri, 02 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/globecom/CaoWZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GremalschiAAZ09,
author = {Stefan Gremalschi and
Gulsah Altun and
Irina Astrovskaya and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Mean Square Residue Biclustering with Missing Data and Row Inversions},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {28--39},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_4},
doi = {10.1007/978-3-642-01551-9\_4},
timestamp = {Fri, 24 Mar 2023 16:31:04 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GremalschiAAZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/BermanKZ09,
author = {Piotr Berman and
Marek Karpinski and
Alexander Zelikovsky},
editor = {Frank K. H. A. Dehne and
Marina L. Gavrilova and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Csaba D. T{\'{o}}th},
title = {1.25-Approximation Algorithm for Steiner Tree Problem with Distances
1 and 2},
booktitle = {Algorithms and Data Structures, 11th International Symposium, {WADS}
2009, Banff, Canada, August 21-23, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5664},
pages = {86--97},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03367-4\_8},
doi = {10.1007/978-3-642-03367-4\_8},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/wads/BermanKZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wob/AstrovskayaZ09,
author = {Irina Astrovskaya and
Alexander Zelikovsky},
editor = {Katia S. Guimar{\~{a}}es and
Anna R. Panchenko and
Teresa M. Przytycka},
title = {Genotype Tagging with Limited Overfitting},
booktitle = {Advances in Bioinformatics and Computational Biology, 4th Brazilian
Symposium on Bioinformatics, {BSB} 2009, Porto Alegre, Brazil, July
29-31, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5676},
pages = {1--12},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03223-3\_1},
doi = {10.1007/978-3-642-03223-3\_1},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/wob/AstrovskayaZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/opt/Zelikovsky09,
author = {Alexander Zelikovsky},
editor = {Christodoulos A. Floudas and
Panos M. Pardalos},
title = {Bottleneck Steiner Tree Problems},
booktitle = {Encyclopedia of Optimization, Second Edition},
pages = {311--313},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-0-387-74759-0\_54},
doi = {10.1007/978-0-387-74759-0\_54},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/opt/Zelikovsky09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BrinzaZ08,
author = {Dumitru Brinza and
Alexander Zelikovsky},
title = {Design and Validation of Methods Searching for Risk Factors in Genotype
Case-Control Studies},
journal = {J. Comput. Biol.},
volume = {15},
number = {1},
pages = {81--90},
year = {2008},
url = {https://doi.org/10.1089/cmb.2007.0081},
doi = {10.1089/CMB.2007.0081},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/BrinzaZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BrinzaZ08,
author = {Dumitru Brinza and
Alexander Zelikovsky},
title = {2SNP: Scalable Phasing Method for Trios and Unrelated Individuals},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {5},
number = {2},
pages = {313--318},
year = {2008},
url = {https://doi.org/10.1109/TCBB.2007.1068},
doi = {10.1109/TCBB.2007.1068},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/BrinzaZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandoiuPZ08,
author = {Ion I. Mandoiu and
Yi Pan and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {5},
number = {3},
pages = {321--322},
year = {2008},
url = {https://doi.org/10.1109/TCBB.2008.85},
doi = {10.1109/TCBB.2008.85},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MandoiuPZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ChengBHZ08,
author = {Qiong Cheng and
Piotr Berman and
Robert W. Harrison and
Alexander Zelikovsky},
editor = {Xue{-}wen Chen and
Xiaohua Hu and
Sun Kim},
title = {Fast Alignments of Metabolic Networks},
booktitle = {2008 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2008, Philadephia, Pennsylvania, USA, November 3-5, 2008},
pages = {147--152},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/BIBM.2008.75},
doi = {10.1109/BIBM.2008.75},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ChengBHZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WestbrooksACKBZ08,
author = {Kelly Westbrooks and
Irina Astrovskaya and
David S. Campo and
Yuri Khudyakov and
Piotr Berman and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {{HCV} Quasispecies Assembly Using Network Flows},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {159--170},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_15},
doi = {10.1007/978-3-540-79450-9\_15},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WestbrooksACKBZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2008,
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9},
doi = {10.1007/978-3-540-79450-9},
isbn = {978-3-540-79449-3},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/RobinsZ08,
author = {Gabriel Robins and
Alexander Zelikovsky},
editor = {Charles J. Alpert and
Dinesh P. Mehta and
Sachin S. Sapatnekar},
title = {Minimum Steiner Tree Construction},
booktitle = {Handbook of Algorithms for Physical Design Automation},
publisher = {Auerbach Publications},
year = {2008},
url = {https://doi.org/10.1201/9781420013481.ch24},
doi = {10.1201/9781420013481.CH24},
timestamp = {Mon, 26 Oct 2020 09:04:39 +0100},
biburl = {https://dblp.org/rec/reference/crc/RobinsZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0810-1851,
author = {Piotr Berman and
Marek Karpinski and
Alexander Zelikovsky},
title = {1.25 Approximation Algorithm for the Steiner Tree Problem with Distances
One and Two},
journal = {CoRR},
volume = {abs/0810.1851},
year = {2008},
url = {http://arxiv.org/abs/0810.1851},
eprinttype = {arXiv},
eprint = {0810.1851},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0810-1851.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0812-2137,
author = {Piotr Berman and
Marek Karpinski and
Alexander Zelikovsky},
title = {A Factor 3/2 Approximation for Generalized Steiner Tree Problem with
Distances One and Two},
journal = {CoRR},
volume = {abs/0812.2137},
year = {2008},
url = {http://arxiv.org/abs/0812.2137},
eprinttype = {arXiv},
eprint = {0812.2137},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0812-2137.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/BermanKZ08,
author = {Piotr Berman and
Marek Karpinski and
Alexander Zelikovsky},
title = {1.25 Approximation Algorithm for the Steiner Tree Problem with Distances
One and Two},
journal = {Electron. Colloquium Comput. Complex.},
volume = {{TR08-094}},
year = {2008},
url = {https://eccc.weizmann.ac.il/eccc-reports/2008/TR08-094/index.html},
eprinttype = {ECCC},
eprint = {TR08-094},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eccc/BermanKZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AlbertDDKSZW07,
author = {R{\'{e}}ka Albert and
Bhaskar DasGupta and
Riccardo Dondi and
Sema Kachalo and
Eduardo D. Sontag and
Alexander Zelikovsky and
Kelly Westbrooks},
title = {A Novel Method for Signal Transduction Network Inference from Indirect
Experimental Evidence},
journal = {J. Comput. Biol.},
volume = {14},
number = {7},
pages = {927--949},
year = {2007},
url = {https://doi.org/10.1089/cmb.2007.0015},
doi = {10.1089/CMB.2007.0015},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/AlbertDDKSZW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jucs/CalinescuMZZ07,
author = {Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Alexander Zelikovsky and
Marius Zimand},
title = {Selected Papers from the 1st {ACIS} International Workshop on Self-Assembling
Wireless Networks},
journal = {J. Univers. Comput. Sci.},
volume = {13},
number = {1},
pages = {1--3},
year = {2007},
url = {http://www.jucs.org/jucs\_13\_1/self\_assembling\_wireless\_networks},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jucs/CalinescuMZZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jucs/HundewaleJZ07,
author = {Nisar Hundewale and
Sunsook Jung and
Alexander Zelikovsky},
title = {Energy Efficient Node Caching and Load Balancing Enhancement of Reactive
Ad Hoc Routing Protocols},
journal = {J. Univers. Comput. Sci.},
volume = {13},
number = {1},
pages = {110--132},
year = {2007},
url = {https://doi.org/10.3217/jucs-013-01-0110},
doi = {10.3217/JUCS-013-01-0110},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jucs/HundewaleJZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/ChiangKSXZ07,
author = {Charles C. Chiang and
Andrew B. Kahng and
Subarna Sinha and
Xu Xu and
Alexander Zelikovsky},
title = {Fast and Efficient Bright-Field {AAPSM} Conflict Detection and Correction},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {26},
number = {1},
pages = {115--126},
year = {2007},
url = {https://doi.org/10.1109/TCAD.2006.882642},
doi = {10.1109/TCAD.2006.882642},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/ChiangKSXZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/KahngMXZ07,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Xu Xu and
Alexander Zelikovsky},
title = {Enhanced Design Flow and Optimizations for Multiproject Wafers},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {26},
number = {2},
pages = {301--311},
year = {2007},
url = {https://doi.org/10.1109/TCAD.2006.883922},
doi = {10.1109/TCAD.2006.883922},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/KahngMXZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MandoiuPZ07,
author = {Ion I. Mandoiu and
Yi Pan and
Alexander Zelikovsky},
title = {Guest Editors' Introduction to the Special Section on Bioinformatics
Research and Applications},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {4},
number = {4},
pages = {513--514},
year = {2007},
url = {https://doi.org/10.1109/TCBB.2007.4381228},
doi = {10.1109/TCBB.2007.4381228},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MandoiuPZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/BrinzaZ07,
author = {Dumitru Brinza and
Alexander Zelikovsky},
title = {Discrete Methods for Association Search and Status Prediction in Genotype
Case-Control Studies},
booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
School, Boston, MA, {USA}},
pages = {270--277},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBE.2007.4375576},
doi = {10.1109/BIBE.2007.4375576},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/bibe/BrinzaZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ChengHZ07,
author = {Qiong Cheng and
Robert W. Harrison and
Alexander Zelikovsky},
title = {Homomorphisms of Multisource Trees into Networks with Applications
to Metabolic Pathways},
booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
School, Boston, MA, {USA}},
pages = {350--357},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBE.2007.4375587},
doi = {10.1109/BIBE.2007.4375587},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ChengHZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/BrinzaZ07,
author = {Dumitru Brinza and
Alexander Zelikovsky},
title = {Risk Factor Searching Heuristics for {SNP} Case-Control Studies},
booktitle = {Proceedings of the {IEEE} International Conference on Bioinformatics
and Biomedicine, {BIBM} 2007, Silicon Valley, CA, USA, November 2-4,
2007},
pages = {282--287},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBM.2007.62},
doi = {10.1109/BIBM.2007.62},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/BrinzaZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/AlbertDDKSZW07,
author = {R{\'{e}}ka Albert and
Bhaskar DasGupta and
Riccardo Dondi and
Sema Kachalo and
Eduardo D. Sontag and
Alexander Zelikovsky and
Kelly Westbrooks},
editor = {Raffaele Giancarlo and
Sridhar Hannenhalli},
title = {A Novel Method for Signal Transduction Network Inference from Indirect
Experimental Evidence},
booktitle = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4645},
pages = {407--419},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-74126-8\_38},
doi = {10.1007/978-3-540-74126-8\_38},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/AlbertDDKSZW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2007,
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7},
doi = {10.1007/978-3-540-72031-7},
isbn = {978-3-540-72030-0},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2007.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/MandoiuKAZ07,
author = {Ion I. Mandoiu and
Andrew B. Kahng and
Christoph Albrecht and
Alexander Zelikovsky},
editor = {Teofilo F. Gonzalez},
title = {Multicommodity Flow Algorithms for Buffered Global Routing},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics},
publisher = {Chapman and Hall/CRC},
year = {2007},
url = {https://doi.org/10.1201/9781420010749.ch80},
doi = {10.1201/9781420010749.CH80},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/crc/MandoiuKAZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/MandoiuKZ07,
author = {Ion I. Mandoiu and
Andrew B. Kahng and
Alexander Zelikovsky},
editor = {Teofilo F. Gonzalez},
title = {Practical Approximations of Steiner Trees in Uniform Orientation Metrics},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics},
publisher = {Chapman and Hall/CRC},
year = {2007},
url = {https://doi.org/10.1201/9781420010749.ch43},
doi = {10.1201/9781420010749.CH43},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/crc/MandoiuKZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/crc/MandoiuOZ07,
author = {Ion I. Mandoiu and
Alex Olshevsky and
Alexander Zelikovsky},
editor = {Teofilo F. Gonzalez},
title = {QoS Multimedia Multicast Routing},
booktitle = {Handbook of Approximation Algorithms and Metaheuristics},
publisher = {Chapman and Hall/CRC},
year = {2007},
url = {https://doi.org/10.1201/9781420010749.ch71},
doi = {10.1201/9781420010749.CH71},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/crc/MandoiuOZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0710-4661,
author = {Charles C. Chiang and
Andrew B. Kahng and
Subarna Sinha and
Xu Xu and
Alexander Zelikovsky},
title = {Bright-Field {AAPSM} Conflict Detection and Correction},
journal = {CoRR},
volume = {abs/0710.4661},
year = {2007},
url = {http://arxiv.org/abs/0710.4661},
eprinttype = {arXiv},
eprint = {0710.4661},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0710-4661.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrinzaZ06,
author = {Dumitru Brinza and
Alexander Zelikovsky},
title = {2SNP: scalable phasing based on 2-SNP haplotypes},
journal = {Bioinform.},
volume = {22},
number = {3},
pages = {371--373},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/bti785},
doi = {10.1093/BIOINFORMATICS/BTI785},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrinzaZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HeZ06,
author = {Jingwu He and
Alexander Zelikovsky},
title = {MLR-tagging: informative {SNP} selection for unphased genotypes based
on multiple linear regression},
journal = {Bioinform.},
volume = {22},
number = {20},
pages = {2558--2561},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl420},
doi = {10.1093/BIOINFORMATICS/BTL420},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HeZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/KahngMRXZ06,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Sherief Reda and
Xu Xu and
Alexander Zelikovsky},
title = {Computer-Aided Optimization of {DNA} Array Design and Manufacturing},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {25},
number = {2},
pages = {305--320},
year = {2006},
url = {https://doi.org/10.1109/TCAD.2005.855940},
doi = {10.1109/TCAD.2005.855940},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/KahngMRXZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/winet/AlthausCMPTZ06,
author = {Ernst Althaus and
Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Sushil K. Prasad and
N. Tchervenski and
Alexander Zelikovsky},
title = {Power Efficient Range Assignment for Symmetric Connectivity in Static
Ad Hoc Wireless Networks},
journal = {Wirel. Networks},
volume = {12},
number = {3},
pages = {287--299},
year = {2006},
url = {https://doi.org/10.1007/s11276-005-5275-x},
doi = {10.1007/S11276-005-5275-X},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/winet/AlthausCMPTZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csr/BermanFZ06,
author = {Piotr Berman and
Martin F{\"{u}}rer and
Alexander Zelikovsky},
editor = {Dima Grigoriev and
John Harrison and
Edward A. Hirsch},
title = {Applications of the Linear Matroid Parity Algorithm to Approximating
Steiner Trees},
booktitle = {Computer Science - Theory and Applications, First International Symposium
on Computer Science in Russia, {CSR} 2006, St. Petersburg, Russia,
June 8-12, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3967},
pages = {70--79},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11753728\_10},
doi = {10.1007/11753728\_10},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csr/BermanFZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/HeZ06,
author = {Jingwu He and
Alex Zelikovsky},
title = {Multiple Linear Regression for Index {SNP} Selection on Unphased Genotypes},
booktitle = {28th International Conference of the {IEEE} Engineering in Medicine
and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
- September 3, 2006, Main Volume},
pages = {5759--5762},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/IEMBS.2006.259408},
doi = {10.1109/IEMBS.2006.259408},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/HeZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/BrinzaHZ06,
author = {Dumitru Brinza and
Jingwu He and
Alexander Zelikovsky},
title = {Combinatorial Search Methods for Multi-SNP Disease Association},
booktitle = {28th International Conference of the {IEEE} Engineering in Medicine
and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30
- September 3, 2006, Main Volume},
pages = {5802--5805},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/IEMBS.2006.260510},
doi = {10.1109/IEMBS.2006.260510},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/BrinzaHZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/grc/MaoBHGZ06,
author = {Weidong Mao and
Dumitru Brinza and
Nisar Hundewale and
Stefan Gremalschi and
Alexander Zelikovsky},
title = {Genotype susceptibility and integrated risk factors for complex diseases},
booktitle = {2006 {IEEE} International Conference on Granular Computing, GrC 2006,
Atlanta, Georgia, USA, May 10-12, 2006},
pages = {754--757},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/GRC.2006.1635910},
doi = {10.1109/GRC.2006.1635910},
timestamp = {Wed, 16 Oct 2019 14:14:49 +0200},
biburl = {https://dblp.org/rec/conf/grc/MaoBHGZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/grc/HeZAZZ06,
author = {Jingwu He and
Jun Zhang and
Gulsah Altun and
Alexander Zelikovsky and
Yanqing Zhang},
title = {Haplotype tagging using support vector machines},
booktitle = {2006 {IEEE} International Conference on Granular Computing, GrC 2006,
Atlanta, Georgia, USA, May 10-12, 2006},
pages = {758--761},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/GRC.2006.1635911},
doi = {10.1109/GRC.2006.1635911},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/grc/HeZAZZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/grc/AltunHBHZP06,
author = {Gulsah Altun and
Hae{-}Jin Hu and
Dumitru Brinza and
Robert W. Harrison and
Alexander Zelikovsky and
Yi Pan},
title = {Hybrid {SVM} Kernels for Protein Secondary Structure Prediction},
booktitle = {2006 {IEEE} International Conference on Granular Computing, GrC 2006,
Atlanta, Georgia, USA, May 10-12, 2006},
pages = {762--765},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/GRC.2006.1635912},
doi = {10.1109/GRC.2006.1635912},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/grc/AltunHBHZP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/HeZ06,
author = {Jingwu He and
Alexander Zelikovsky},
editor = {Vassil N. Alexandrov and
G. Dick van Albada and
Peter M. A. Sloot and
Jack J. Dongarra},
title = {Tag {SNP} Selection Based on Multivariate Linear Regression},
booktitle = {Computational Science - {ICCS} 2006, 6th International Conference,
Reading, UK, May 28-31, 2006, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {3992},
pages = {750--757},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11758525\_101},
doi = {10.1007/11758525\_101},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/iccS/HeZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BrinzaZ06,
author = {Dumitru Brinza and
Alexander Zelikovsky},
editor = {Vassil N. Alexandrov and
G. Dick van Albada and
Peter M. A. Sloot and
Jack J. Dongarra},
title = {Phasing of 2-SNP Genotypes Based on Non-random Mating Model},
booktitle = {Computational Science - {ICCS} 2006, 6th International Conference,
Reading, UK, May 28-31, 2006, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {3992},
pages = {767--774},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11758525\_103},
doi = {10.1007/11758525\_103},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccS/BrinzaZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/KahngSZ06,
author = {Andrew B. Kahng and
Puneet Sharma and
Alexander Zelikovsky},
editor = {Soha Hassoun},
title = {Fill for shallow trench isolation {CMP}},
booktitle = {2006 International Conference on Computer-Aided Design, {ICCAD} 2006,
San Jose, CA, USA, November 5-9, 2006},
pages = {661--668},
publisher = {{ACM}},
year = {2006},
url = {https://doi.org/10.1145/1233501.1233639},
doi = {10.1145/1233501.1233639},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/KahngSZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/snpd/BrinzaZ06,
author = {Dumitru Brinza and
Alexander Zelikovsky},
editor = {Yeong{-}Tae Song and
Chao Lu and
Roger Y. Lee},
title = {{DEEPS:} Deterministic Energy-Efficient Protocol for Sensor networks},
booktitle = {Seventh International Conference on Software Engineering, Artificial
Intelligence, Networking and Parallel/Distributed Computing {(SNPD}
2006), 19-20 June 2006, Las Vegas, Nevada, {USA}},
pages = {261--266},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/SNPD-SAWN.2006.31},
doi = {10.1109/SNPD-SAWN.2006.31},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/snpd/BrinzaZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/snpd/DhawanVZLP06,
author = {Akshaye Dhawan and
Chinh T. Vu and
Alexander Zelikovsky and
Yingshu Li and
Sushil K. Prasad},
editor = {Yeong{-}Tae Song and
Chao Lu and
Roger Y. Lee},
title = {Maximum Lifetime of Sensor Networks with Adjustable Sensing Range},
booktitle = {Seventh International Conference on Software Engineering, Artificial
Intelligence, Networking and Parallel/Distributed Computing {(SNPD}
2006), 19-20 June 2006, Las Vegas, Nevada, {USA}},
pages = {285--289},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/SNPD-SAWN.2006.46},
doi = {10.1109/SNPD-SAWN.2006.46},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/snpd/DhawanVZLP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/BrinzaZ06,
author = {Dumitru Brinza and
Alexander Zelikovsky},
editor = {Philipp Bucher and
Bernard M. E. Moret},
title = {Combinatorial Methods for Disease Association Search and Susceptibility
Prediction},
booktitle = {Algorithms in Bioinformatics, 6th International Workshop, {WABI} 2006,
Zurich, Switzerland, September 11-13, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4175},
pages = {286--297},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11851561\_27},
doi = {10.1007/11851561\_27},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/BrinzaZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/sci/ChengZHHZ06,
author = {Qiong Cheng and
Yanqing Zhang and
Xiaolin Hu and
Nisar Hundewale and
Alexander Zelikovsky},
editor = {Mark Last and
Piotr S. Szczepaniak and
Zeev Volkovich and
Abraham Kandel},
title = {Routing Using Messengers in Sparse and Disconnected Mobile Sensor
Networks},
booktitle = {Advances in Web Intelligence and Data Mining},
series = {Studies in Computational Intelligence},
volume = {23},
pages = {31--40},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/3-540-33880-2\_4},
doi = {10.1007/3-540-33880-2\_4},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/series/sci/ChengZHHZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/KarpinskiMOZ05,
author = {Marek Karpinski and
Ion I. Mandoiu and
Alexander Olshevsky and
Alexander Zelikovsky},
title = {Improved Approximation Algorithms for the Quality of Service Multicast
Tree Problem},
journal = {Algorithmica},
volume = {42},
number = {2},
pages = {109--120},
year = {2005},
url = {https://doi.org/10.1007/s00453-004-1133-y},
doi = {10.1007/S00453-004-1133-Y},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/KarpinskiMOZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/BrinzaHMZ05,
author = {Dumitru Brinza and
Jingwu He and
Weidong Mao and
Alexander Zelikovsky},
title = {Family trio phasing and missing data recovery},
journal = {Int. J. Bioinform. Res. Appl.},
volume = {1},
number = {2},
pages = {221--229},
year = {2005},
url = {https://doi.org/10.1504/IJBRA.2005.007580},
doi = {10.1504/IJBRA.2005.007580},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijbra/BrinzaHMZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/HeWZ05,
author = {Jingwu He and
Kelly Westbrooks and
Alexander Zelikovsky},
title = {Linear reduction method for predictive and informative tag {SNP} selection},
journal = {Int. J. Bioinform. Res. Appl.},
volume = {1},
number = {3},
pages = {249--260},
year = {2005},
url = {https://doi.org/10.1504/IJBRA.2005.007904},
doi = {10.1504/IJBRA.2005.007904},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijbra/HeWZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/CalinescuZ05,
author = {Gruia C{\u{a}}linescu and
Alexander Zelikovsky},
title = {The Polymatroid Steiner Problems},
journal = {J. Comb. Optim.},
volume = {9},
number = {3},
pages = {281--294},
year = {2005},
url = {https://doi.org/10.1007/s10878-005-1412-9},
doi = {10.1007/S10878-005-1412-9},
timestamp = {Tue, 06 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jco/CalinescuZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamdm/RobinsZ05,
author = {Gabriel Robins and
Alexander Zelikovsky},
title = {Tighter Bounds for Graph Steiner Tree Approximation},
journal = {{SIAM} J. Discret. Math.},
volume = {19},
number = {1},
pages = {122--134},
year = {2005},
url = {https://doi.org/10.1137/S0895480101393155},
doi = {10.1137/S0895480101393155},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamdm/RobinsZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/ChenKRZZ05,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky and
Yuhong Zheng},
title = {Compressible area fill synthesis},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {24},
number = {8},
pages = {1169--1187},
year = {2005},
url = {https://doi.org/10.1109/TCAD.2005.850859},
doi = {10.1109/TCAD.2005.850859},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/ChenKRZZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/ChiangKSXZ05,
author = {Charles C. Chiang and
Andrew B. Kahng and
Subarna Sinha and
Xu Xu and
Alexander Zelikovsky},
title = {Bright-Field {AAPSM} Conflict Detection and Correction},
booktitle = {2005 Design, Automation and Test in Europe Conference and Exposition
{(DATE} 2005), 7-11 March 2005, Munich, Germany},
pages = {908--913},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/DATE.2005.84},
doi = {10.1109/DATE.2005.84},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/ChiangKSXZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BrinzaHMZ05,
author = {Dumitru Brinza and
Jingwu He and
Weidong Mao and
Alexander Zelikovsky},
editor = {Vaidy S. Sunderam and
G. Dick van Albada and
Peter M. A. Sloot and
Jack J. Dongarra},
title = {Phasing and Missing Data Recovery in Family Trios},
booktitle = {Computational Science - {ICCS} 2005, 5th International Conference,
Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {3515},
pages = {1011--1019},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11428848\_128},
doi = {10.1007/11428848\_128},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccS/BrinzaHMZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mass/BrinzaCTZ05,
author = {Dumitru Brinza and
Gruia C{\u{a}}linescu and
Sutep Tongngam and
Alexander Zelikovsky},
title = {Energy-efficient continuous and event-driven monitoring},
booktitle = {{IEEE} 2nd International Conference on Mobile Adhoc and Sensor Systems,
{MASS} 2005, November 7-10, 2005, The City Center Hotel, Washington,
{USA}},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/MAHSS.2005.1542792},
doi = {10.1109/MAHSS.2005.1542792},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/mass/BrinzaCTZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/snpd/JungHZ05,
author = {Sunsook Jung and
Nisar Hundewale and
Alexander Zelikovsky},
editor = {Lawrence Chung and
Yeong{-}Tae Song},
title = {{GKM} over large {MANET}},
booktitle = {Proceedings of the 6th {ACIS} International Conference on Software
Engineering, Artificial Intelligence, Networking and Parallel/Distributed
Computing {(SNPD} 2005), May 23-25, 2005, Towson, Maryland, {USA}},
pages = {484--490},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/SNPD-SAWN.2005.40},
doi = {10.1109/SNPD-SAWN.2005.40},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/snpd/JungHZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wcnc/JungHZ05,
author = {Sunsook Jung and
Nisar Hundewale and
Alex Zelikovsky},
title = {Node caching enhancement of reactive ad hoc routing protocols {[MANET]}},
booktitle = {{IEEE} Wireless Communications and Networking Conference, {WCNC} 2005,
March 13-17, 2005, New Orleans, Louisiana, {USA}},
pages = {1970--1975},
publisher = {{IEEE}},
year = {2005},
url = {https://doi.org/10.1109/WCNC.2005.1424821},
doi = {10.1109/WCNC.2005.1424821},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wcnc/JungHZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:journals/tcsb/2005-2,
editor = {Corrado Priami and
Alexander Zelikovsky},
title = {Transactions on Computational Systems Biology {II}},
series = {Lecture Notes in Computer Science},
volume = {3680},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11567752},
doi = {10.1007/11567752},
isbn = {3-540-29401-5},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcsb/2005-2.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-cs-0508045,
author = {Christoph Albrecht and
Andrew B. Kahng and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Multicommodity Flow Algorithms for Buffered Global Routing},
journal = {CoRR},
volume = {abs/cs/0508045},
year = {2005},
url = {http://arxiv.org/abs/cs/0508045},
eprinttype = {arXiv},
eprint = {cs/0508045},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-cs-0508045.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/KahngMPRZ04,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Pavel A. Pevzner and
Sherief Reda and
Alexander Zelikovsky},
title = {Scalable Heuristics for Design of {DNA} Probe Arrays},
journal = {J. Comput. Biol.},
volume = {11},
number = {2/3},
pages = {429--447},
year = {2004},
url = {https://doi.org/10.1089/1066527041410391},
doi = {10.1089/1066527041410391},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/KahngMPRZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/monet/CalinescuMWZ04,
author = {Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Peng{-}Jun Wan and
Alexander Zelikovsky},
title = {Selecting Forwarding Neighbors in Wireless Ad Hoc Networks},
journal = {Mob. Networks Appl.},
volume = {9},
number = {2},
pages = {101--111},
year = {2004},
url = {https://doi.org/10.1023/B:MONE.0000013622.63511.57},
doi = {10.1023/B:MONE.0000013622.63511.57},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/monet/CalinescuMWZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icecsys/ChenKRZZ04,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky and
Yuhong Zheng},
title = {Evaluation of the new {OASIS} format for layout fill compression},
booktitle = {Proceedings of the 2004 11th {IEEE} International Conference on Electronics,
Circuits and Systems, {ICECS} 2004, Tel Aviv, Israel, December 13-15,
2004},
pages = {377--382},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/ICECS.2004.1399697},
doi = {10.1109/ICECS.2004.1399697},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/icecsys/ChenKRZZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/CalinescuZ04,
author = {Gruia C{\u{a}}linescu and
Alexander Zelikovsky},
editor = {Rudolf Fleischer and
Gerhard Trippen},
title = {The Polymatroid Steiner Problems},
booktitle = {Algorithms and Computation, 15th International Symposium, {ISAAC}
2004, Hong Kong, China, December 20-22, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3341},
pages = {234--245},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30551-4\_22},
doi = {10.1007/978-3-540-30551-4\_22},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/CalinescuZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/KahngMWXZ04,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Qinke Wang and
Xu Xu and
Alexander Zelikovsky},
editor = {Charles J. Alpert and
Patrick Groeneveld},
title = {Multi-project reticle floorplanning and wafer dicing},
booktitle = {Proceedings of the 2004 International Symposium on Physical Design,
{ISPD} 2004, Phoenix, Arizona, USA, April 18-21, 2004},
pages = {70--77},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/981066.981082},
doi = {10.1145/981066.981082},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ispd/KahngMWXZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/middleware/PrasadMNSDBWLBHXMMSZZPB04,
author = {Sushil K. Prasad and
Vijay K. Madisetti and
Shamkant B. Navathe and
Raj Sunderraman and
Erdogan Dogdu and
Anu G. Bourgeois and
Michael Weeks and
Bing Liu and
Janaka Balasooriya and
Arthi Hariharan and
Wanxia Xie and
Praveen Madiraju and
Srilaxmi Malladi and
Raghupathy Sivakumar and
Alexander Zelikovsky and
Yanqing Zhang and
Yi Pan and
Saeid Belkasim},
editor = {Hans{-}Arno Jacobsen},
title = {SyD: {A} Middleware Testbed for Collaborative Applications over Small
Heterogeneous Devices and Data Stores},
booktitle = {Middleware 2004, {ACM/IFIP/USENIX} International Middleware Conference,
Toronto, Canada, October 18-20, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3231},
pages = {352--371},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30229-2\_19},
doi = {10.1007/978-3-540-30229-2\_19},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/middleware/PrasadMNSDBWLBHXMMSZZPB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HeZ04,
author = {Jingwu He and
Alexander Zelikovsky},
editor = {Inge Jonassen and
Junhyong Kim},
title = {Linear Reduction for Haplotype Inference},
booktitle = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004,
Bergen, Norway, September 17-21, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3240},
pages = {242--253},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30219-3\_21},
doi = {10.1007/978-3-540-30219-3\_21},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/HeZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wcnc/BermanCSZ04,
author = {Piotr Berman and
Gruia C{\u{a}}linescu and
C. Shah and
Alexander Zelikovsky},
title = {Power efficient monitoring management in sensor networks},
booktitle = {2004 {IEEE} Wireless Communications and Networking Conference , {WCNC}
2004, Atlanta, Georgia, USA, 21-25 March 2004},
pages = {2329--2334},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/WCNC.2004.1311452},
doi = {10.1109/WCNC.2004.1311452},
timestamp = {Wed, 16 Oct 2019 14:14:50 +0200},
biburl = {https://dblp.org/rec/conf/wcnc/BermanCSZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/CalinescuFKZ03,
author = {Gruia C{\u{a}}linescu and
Cristina G. Fernandes and
Howard J. Karloff and
Alexander Zelikovsky},
title = {A New Approximation Algorithm for Finding Heavy Planar Subgraphs},
journal = {Algorithmica},
volume = {36},
number = {2},
pages = {179--205},
year = {2003},
url = {https://doi.org/10.1007/s00453-002-1020-3},
doi = {10.1007/S00453-002-1020-3},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/CalinescuFKZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/HelvigRZ03,
author = {Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
title = {The moving-target traveling salesman problem},
journal = {J. Algorithms},
volume = {49},
number = {1},
pages = {153--174},
year = {2003},
url = {https://doi.org/10.1016/S0196-6774(03)00075-0},
doi = {10.1016/S0196-6774(03)00075-0},
timestamp = {Tue, 06 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/HelvigRZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/AlpertKLMZ03,
author = {Charles J. Alpert and
Andrew B. Kahng and
Bao Liu and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Minimum buffered routing with bounded capacitive load for slew rate
and reliability control},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {22},
number = {3},
pages = {241--253},
year = {2003},
url = {https://doi.org/10.1109/TCAD.2002.807888},
doi = {10.1109/TCAD.2002.807888},
timestamp = {Thu, 21 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcad/AlpertKLMZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/AlbrechtKLMZ03,
author = {Christoph Albrecht and
Andrew B. Kahng and
Bao Liu and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {On the skew-bounded minimum-buffer routing tree problem},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {22},
number = {7},
pages = {937--945},
year = {2003},
url = {https://doi.org/10.1109/TCAD.2003.814238},
doi = {10.1109/TCAD.2003.814238},
timestamp = {Thu, 21 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcad/AlbrechtKLMZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/KahngMZ03,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Hiroto Yasuura},
title = {Highly scalable algorithms for rectilinear and octilinear Steiner
trees},
booktitle = {Proceedings of the 2003 Asia and South Pacific Design Automation Conference,
{ASP-DAC} '03, Kitakyushu, Japan, January 21-24, 2003},
pages = {827--833},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/1119772.1119955},
doi = {10.1145/1119772.1119955},
timestamp = {Thu, 11 Mar 2021 17:04:51 +0100},
biburl = {https://dblp.org/rec/conf/aspdac/KahngMZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/compsac/PrasadWZZBSM03,
author = {Sushil K. Prasad and
Michael Weeks and
Yanqing Zhang and
Alexander Zelikovsky and
Saeid Belkasim and
Raj Sunderraman and
Vijay K. Madisetti},
title = {Toward an Easy Programming Environment for Implementing Mobile Applications:
{A} Fleet Application Case Study using SyD Middleware},
booktitle = {27th International Computer Software and Applications Conference {(COMPSAC}
2003): Design and Assessment of Trustworthy Software-Based Systems,
3-6 November 2003, Dallas, TX, USA, Proceedings},
pages = {696--701},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CMPSAC.2003.1245419},
doi = {10.1109/CMPSAC.2003.1245419},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/compsac/PrasadWZZBSM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/ChenKRZZ03,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky and
Yuhong Zheng},
title = {Area Fill Generation With Inherent Data Volume Reduction},
booktitle = {2003 Design, Automation and Test in Europe Conference and Exposition
{(DATE} 2003), 3-7 March 2003, Munich, Germany},
pages = {10868--10875},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.ieeecomputersociety.org/10.1109/DATE.2003.10095},
doi = {10.1109/DATE.2003.10095},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/ChenKRZZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/CalinescuKOZ03,
author = {Gruia C{\u{a}}linescu and
Sanjiv Kapoor and
Alexander Olshevsky and
Alexander Zelikovsky},
editor = {Giuseppe Di Battista and
Uri Zwick},
title = {Network Lifetime and Power Assignment in ad hoc Wireless Networks},
booktitle = {Algorithms - {ESA} 2003, 11th Annual European Symposium, Budapest,
Hungary, September 16-19, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2832},
pages = {114--126},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-39658-1\_13},
doi = {10.1007/978-3-540-39658-1\_13},
timestamp = {Sun, 02 Jun 2019 21:14:37 +0200},
biburl = {https://dblp.org/rec/conf/esa/CalinescuKOZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/globecom/CalinescuFMOYZ03,
author = {Gruia C{\u{a}}linescu and
Cristina G. Fernandes and
Ion I. Mandoiu and
Alexander Olshevsky and
K. Yang and
Alexander Zelikovsky},
title = {Primal-dual algorithms for QoS multimedia multicast},
booktitle = {Proceedings of the Global Telecommunications Conference, 2003. {GLOBECOM}
'03, San Francisco, CA, USA, 1-5 December 2003},
pages = {3631--3635},
publisher = {{IEEE}},
year = {2003},
url = {https://doi.org/10.1109/GLOCOM.2003.1258911},
doi = {10.1109/GLOCOM.2003.1258911},
timestamp = {Wed, 16 Oct 2019 14:14:51 +0200},
biburl = {https://dblp.org/rec/conf/globecom/CalinescuFMOYZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/KahngMRXZ03,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Sherief Reda and
Xu Xu and
Alexander Zelikovsky},
title = {Evaluation of Placement Techniques for {DNA} Probe Array Layout},
booktitle = {2003 International Conference on Computer-Aided Design, {ICCAD} 2003,
San Jose, CA, USA, November 9-13, 2003},
pages = {262--269},
publisher = {{IEEE} Computer Society / {ACM}},
year = {2003},
url = {https://doi.ieeecomputersociety.org/10.1109/ICCAD.2003.1257670},
doi = {10.1109/ICCAD.2003.1257670},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/KahngMRXZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccd/KahngMRXZ03,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Sherief Reda and
Xu Xu and
Alexander Zelikovsky},
title = {Design Flow Enhancements for {DNA} Arrays},
booktitle = {21st International Conference on Computer Design {(ICCD} 2003),VLSI
in Computers and Processors, 13-15 October 2003, San Jose, CA, USA,
Proceedings},
pages = {116},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/ICCD.2003.1240883},
doi = {10.1109/ICCD.2003.1240883},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccd/KahngMRXZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/KahngMPRZ03,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Pavel A. Pevzner and
Sherief Reda and
Alexander Zelikovsky},
editor = {Martin Vingron and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman and
Webb Miller},
title = {Engineering a scalable placement heuristic for {DNA} probe arrays},
booktitle = {Proceedings of the Sventh Annual International Conference on Computational
Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
pages = {148--156},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/640075.640095},
doi = {10.1145/640075.640095},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/KahngMPRZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/KarpinskiMOZ03,
author = {Marek Karpinski and
Ion I. Mandoiu and
Alexander Olshevsky and
Alexander Zelikovsky},
editor = {Frank K. H. A. Dehne and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Michiel H. M. Smid},
title = {Improved Approximation Algorithms for the Quality of Service Steiner
Tree Problem},
booktitle = {Algorithms and Data Structures, 8th International Workshop, {WADS}
2003, Ottawa, Ontario, Canada, July 30 - August 1, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2748},
pages = {401--411},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-45078-8\_35},
doi = {10.1007/978-3-540-45078-8\_35},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/wads/KarpinskiMOZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wcnc/AlthausCMPTZ03,
author = {Ernst Althaus and
Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Sushil K. Prasad and
N. Tchervenski and
Alexander Zelikovsky},
title = {Power efficient range assignment in ad-hoc wireless networks},
booktitle = {2003 {IEEE} Wireless Communications and Networking, {WCNC} 2003, New
Orleans, LA, USA, 16-20 March, 2003},
pages = {1889--1894},
publisher = {{IEEE}},
year = {2003},
url = {https://doi.org/10.1109/WCNC.2003.1200675},
doi = {10.1109/WCNC.2003.1200675},
timestamp = {Wed, 16 Oct 2019 14:14:50 +0200},
biburl = {https://dblp.org/rec/conf/wcnc/AlthausCMPTZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csjm/LozovanuVZ02,
author = {Dmitrii Lozovanu and
Vitaly I. Voloshin and
Alex Zelikovsky},
title = {A note on the colorability of mixed hypergraph using k colors},
journal = {Comput. Sci. J. Moldova},
volume = {10},
number = {1},
pages = {92--95},
year = {2002},
url = {http://www.math.md/publications/csjm/issues/v10-n1/8335/},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/csjm/LozovanuVZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/DraganKMMZ02,
author = {Feodor F. Dragan and
Andrew B. Kahng and
Ion I. Mandoiu and
Sudhakar Muddu and
Alexander Zelikovsky},
title = {Provably good global buffering by generalized multiterminalmulticommodity
flow approximation},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {21},
number = {3},
pages = {263--274},
year = {2002},
url = {https://doi.org/10.1109/43.986421},
doi = {10.1109/43.986421},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/DraganKMMZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/ChenKRZ02,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky},
title = {Area fill synthesis for uniform layout density},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {21},
number = {10},
pages = {1132--1147},
year = {2002},
url = {https://doi.org/10.1109/TCAD.2002.802278},
doi = {10.1109/TCAD.2002.802278},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/ChenKRZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ciit/PrasadWZZBSM02,
author = {Sushil K. Prasad and
Michael Weeks and
Yanqing Zhang and
Alexander Zelikovsky and
Saeid Belkasim and
Rajshekhar Sunderraman and
Vijay K. Madisetti},
editor = {M. H. Hamza},
title = {Mobile Fleet Application using Soap and System on Devices {(SYD)}
Middleware Technologies},
booktitle = {{IASTED} International Conference on Communications, Internet, and
Information Technology, November 18-20, 2002, St. Thomas, {US} Virgin
Islands, {USA}},
pages = {426--431},
publisher = {{IASTED/ACTA} Press},
year = {2002},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ciit/PrasadWZZBSM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifip8/BandelaCKMZ02,
author = {C. Bandela and
Yu Chen and
Andrew B. Kahng and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Roland Traunm{\"{u}}ller},
title = {Auctions with Buyer Preferences},
booktitle = {Information Systems: The e-Business Challenge, {IFIP} 17\({}^{\mbox{th}}\)
World Computer Congress - {TC8} Stream on Information Systems: The
e-Business Challenge, August 25-30, 2002, Montr{\'{e}}al, Qu{\'{e}}bec,
Canada},
series = {{IFIP} Conference Proceedings},
volume = {222},
pages = {223--238},
publisher = {Kluwer},
year = {2002},
timestamp = {Thu, 10 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ifip8/BandelaCKMZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifipTCS/CalinescuMZ02,
author = {Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Ricardo A. Baeza{-}Yates and
Ugo Montanari and
Nicola Santoro},
title = {Symmetric Connectivity with Minimum Power Consumption in Radio Networks},
booktitle = {Foundations of Information Technology in the Era of Networking and
Mobile Computing, {IFIP} 17\({}^{\mbox{th}}\) World Computer Congress
- {TC1} Stream / 2\({}^{\mbox{nd}}\) {IFIP} International Conference
on Theoretical Computer Science {(TCS} 2002), August 25-30, 2002,
Montr{\'{e}}al, Qu{\'{e}}bec, Canada},
series = {{IFIP} Conference Proceedings},
volume = {223},
pages = {119--130},
publisher = {Kluwer},
year = {2002},
url = {https://doi.org/10.1007/978-0-387-35608-2\_11},
doi = {10.1007/978-0-387-35608-2\_11},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ifipTCS/CalinescuMZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/ChenKRZ02,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Sachin S. Sapatnekar and
Massoud Pedram},
title = {Closing the smoothness and uniformity gap in area fill synthesis},
booktitle = {Proceedings of 2002 International Symposium on Physical Design, {ISPD}
2002, Del Mar, CA, USA, April 7-10, 2002},
pages = {137--142},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/505388.505422},
doi = {10.1145/505388.505422},
timestamp = {Tue, 06 Nov 2018 11:07:47 +0100},
biburl = {https://dblp.org/rec/conf/ispd/ChenKRZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vlsid/AlbrechtKMZ02,
author = {Christoph Albrecht and
Andrew B. Kahng and
Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Floorplan Evaluation with Timing-Driven Global Wireplanning, Pin Assignment
and Buffer/Wire Sizing},
booktitle = {Proceedings of the 7th Asia and South Pacific Design Automation Conference
{(ASP-DAC} 2002), and the 15th International Conference on {VLSI}
Design {(VLSI} Design 2002), Bangalore, India, January 7-11, 2002},
pages = {580},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/ASPDAC.2002.994986},
doi = {10.1109/ASPDAC.2002.994986},
timestamp = {Mon, 14 Nov 2022 15:28:09 +0100},
biburl = {https://dblp.org/rec/conf/vlsid/AlbrechtKMZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/KahngMPRZ02,
author = {Andrew B. Kahng and
Ion I. Mandoiu and
Pavel A. Pevzner and
Sherief Reda and
Alexander Zelikovsky},
editor = {Roderic Guig{\'{o}} and
Dan Gusfield},
title = {Border Length Minimization in {DNA} Array Design},
booktitle = {Algorithms in Bioinformatics, Second International Workshop, {WABI}
2002, Rome, Italy, September 17-21, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2452},
pages = {435--448},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45784-4\_34},
doi = {10.1007/3-540-45784-4\_34},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/KahngMPRZ02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/networks/HelvigRZ01,
author = {Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
title = {An improved approximation scheme for the Group Steiner Problem},
journal = {Networks},
volume = {37},
number = {1},
pages = {8--20},
year = {2001},
url = {https://doi.org/10.1002/1097-0037(200101)37:1\&\#60;8::AID-NET2\&\#62;3.0.CO;2-R},
doi = {10.1002/1097-0037(200101)37:1\&\#60;8::AID-NET2\&\#62;3.0.CO;2-R},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/networks/HelvigRZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamdm/ZelikovskyM01,
author = {Alexander Zelikovsky and
Ion I. Mandoiu},
title = {Practical Approximation Algorithms for Zero- and Bounded-Skew Trees},
journal = {{SIAM} J. Discret. Math.},
volume = {15},
number = {1},
pages = {97--111},
year = {2001},
url = {https://doi.org/10.1137/S0895480100378367},
doi = {10.1137/S0895480100378367},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamdm/ZelikovskyM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/DraganKMMZ01,
author = {Feodor F. Dragan and
Andrew B. Kahng and
Ion I. Mandoiu and
Sudhakar Muddu and
Alexander Zelikovsky},
editor = {Satoshi Goto},
title = {Provably good global buffering by multi-terminal multicommodity flow
approximation},
booktitle = {Proceedings of {ASP-DAC} 2001, Asia and South Pacific Design Automation
Conference 2001, January 30-February 2, 2001, Yokohama, Japan},
pages = {120--125},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/370155.370299},
doi = {10.1145/370155.370299},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/aspdac/DraganKMMZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/KahngVZ01,
author = {Andrew B. Kahng and
Shailesh Vaya and
Alexander Zelikovsky},
editor = {Satoshi Goto},
title = {New graph bipartizations for double-exposure, bright field alternating
phase-shift mask layout},
booktitle = {Proceedings of {ASP-DAC} 2001, Asia and South Pacific Design Automation
Conference 2001, January 30-February 2, 2001, Yokohama, Japan},
pages = {133--138},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/370155.370304},
doi = {10.1145/370155.370304},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aspdac/KahngVZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/ChenKRZ01,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Satoshi Goto},
title = {Hierarchical dummy fill for process uniformity},
booktitle = {Proceedings of {ASP-DAC} 2001, Asia and South Pacific Design Automation
Conference 2001, January 30-February 2, 2001, Yokohama, Japan},
pages = {139--144},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/370155.370306},
doi = {10.1145/370155.370306},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aspdac/ChenKRZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dialm/CalinescuMWZ01,
author = {Gruia C{\u{a}}linescu and
Ion I. Mandoiu and
Peng{-}Jun Wan and
Alexander Zelikovsky},
title = {Selecting forwarding neighbors in wireless Ad Hoc networks},
booktitle = {Proceedings of the 5th International Workshop on Discrete Algorithms
and Methods for Mobile Computing and Communications {(DIAL-M} 2001),
Rome, Italy, July 21, 2001},
pages = {34--43},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/381448.381453},
doi = {10.1145/381448.381453},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dialm/CalinescuMWZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/AlpertKLMZ01,
author = {Charles J. Alpert and
Andrew B. Kahng and
Bao Liu and
Ion I. Mandoiu and
Alexander Zelikovsky},
editor = {Rolf Ernst},
title = {Minimum-Buffered Routing of Non-Critical Nets for Slew Rate and Reliability
Control},
booktitle = {Proceedings of the 2001 {IEEE/ACM} International Conference on Computer-Aided
Design, {ICCAD} 2001, San Jose, CA, USA, November 4-8, 2001},
pages = {408},
publisher = {{IEEE} Computer Society},
year = {2001},
url = {https://doi.org/10.1109/ICCAD.2001.968659},
doi = {10.1109/ICCAD.2001.968659},
timestamp = {Thu, 21 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/AlpertKLMZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/ZelikovskyM01,
author = {Alexander Zelikovsky and
Ion I. Mandoiu},
editor = {S. Rao Kosaraju},
title = {Practical approximation algorithms for zero- and bounded-skew trees},
booktitle = {Proceedings of the Twelfth Annual Symposium on Discrete Algorithms,
January 7-9, 2001, Washington, DC, {USA}},
pages = {407--416},
publisher = {{ACM/SIAM}},
year = {2001},
url = {http://dl.acm.org/citation.cfm?id=365411.365490},
timestamp = {Fri, 07 Dec 2012 17:02:08 +0100},
biburl = {https://dblp.org/rec/conf/soda/ZelikovskyM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/DraganKMMZ01,
author = {Feodor F. Dragan and
Andrew B. Kahng and
Ion I. Mandoiu and
Sudhakar Muddu and
Alexander Zelikovsky},
editor = {Frank K. H. A. Dehne and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Roberto Tamassia},
title = {Practical Approximation Algorithms for Separable Packing Linear Programs},
booktitle = {Algorithms and Data Structures, 7th International Workshop, {WADS}
2001, Providence, RI, USA, August 8-10, 2001, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2125},
pages = {325--337},
publisher = {Springer},
year = {2001},
url = {https://doi.org/10.1007/3-540-44634-6\_30},
doi = {10.1007/3-540-44634-6\_30},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wads/DraganKMMZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/MandoiuZ00,
author = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A note on the {MST} heuristic for bounded edge-length Steiner trees
with minimum number of Steiner points},
journal = {Inf. Process. Lett.},
volume = {75},
number = {4},
pages = {165--167},
year = {2000},
url = {https://doi.org/10.1016/S0020-0190(00)00095-8},
doi = {10.1016/S0020-0190(00)00095-8},
timestamp = {Tue, 06 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/MandoiuZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/BermanKVWZ00,
author = {Piotr Berman and
Andrew B. Kahng and
Devendra Vidhani and
Huijuan Wang and
Alexander Zelikovsky},
title = {Optimal phase conflict removal for layout of dark field alternatingphase
shifting masks},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {19},
number = {2},
pages = {175--187},
year = {2000},
url = {https://doi.org/10.1109/43.828546},
doi = {10.1109/43.828546},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/BermanKVWZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/HelvigRZ00,
author = {Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
title = {New approximation algorithms for routing with multiport terminals},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {19},
number = {10},
pages = {1118--1128},
year = {2000},
url = {https://doi.org/10.1109/43.875285},
doi = {10.1109/43.875285},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/HelvigRZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/ChenKRZ00,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky},
title = {Monte-Carlo algorithms for layout density control},
booktitle = {Proceedings of {ASP-DAC} 2000, Asia and South Pacific Design Automation
Conference 2000, Yokohama, Japan},
pages = {523--528},
publisher = {{ACM}},
year = {2000},
url = {https://doi.org/10.1145/368434.368778},
doi = {10.1145/368434.368778},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aspdac/ChenKRZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dac/ChenKRZ00,
author = {Yu Chen and
Andrew B. Kahng and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Giovanni De Micheli},
title = {Practical iterated fill synthesis for {CMP} uniformity},
booktitle = {Proceedings of the 37th Conference on Design Automation, Los Angeles,
CA, USA, June 5-9, 2000},
pages = {671--674},
publisher = {{ACM}},
year = {2000},
url = {https://doi.org/10.1145/337292.337610},
doi = {10.1145/337292.337610},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dac/ChenKRZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/DraganKMMZ00,
author = {Feodor F. Dragan and
Andrew B. Kahng and
Ion I. Mandoiu and
Sudhakar Muddu and
Alexander Zelikovsky},
editor = {Ellen Sentovich},
title = {Provably Good Global Buffering Using an Available Buffer Block Plan},
booktitle = {Proceedings of the 2000 {IEEE/ACM} International Conference on Computer-Aided
Design, 2000, San Jose, California, USA, November 5-9, 2000},
pages = {104--109},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/ICCAD.2000.896458},
doi = {10.1109/ICCAD.2000.896458},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/DraganKMMZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/RobinsZ00,
author = {Gabriel Robins and
Alexander Zelikovsky},
editor = {David B. Shmoys},
title = {Improved Steiner tree approximation in graphs},
booktitle = {Proceedings of the Eleventh Annual {ACM-SIAM} Symposium on Discrete
Algorithms, January 9-11, 2000, San Francisco, CA, {USA}},
pages = {770--779},
publisher = {{ACM/SIAM}},
year = {2000},
url = {http://dl.acm.org/citation.cfm?id=338219.338638},
timestamp = {Fri, 07 Dec 2012 17:02:08 +0100},
biburl = {https://dblp.org/rec/conf/soda/RobinsZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/KahngRSZ99,
author = {Andrew B. Kahng and
Gabriel Robins and
Anish Singh and
Alexander Zelikovsky},
title = {Filling algorithms and analyses for layout density control},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {18},
number = {4},
pages = {445--462},
year = {1999},
url = {https://doi.org/10.1109/43.752928},
doi = {10.1109/43.752928},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/KahngRSZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/CaldwellKMMZ99,
author = {Andrew E. Caldwell and
Andrew B. Kahng and
Stefanus Mantik and
Igor L. Markov and
Alexander Zelikovsky},
title = {On wirelength estimations for row-based placement},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {18},
number = {9},
pages = {1265--1278},
year = {1999},
url = {https://doi.org/10.1109/43.784119},
doi = {10.1109/43.784119},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/CaldwellKMMZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/KahngRSZ99,
author = {Andrew B. Kahng and
Gabriel Robins and
Anish Singh and
Alexander Zelikovsky},
title = {New Multilevel and Hierarchical Algorithms for Layout Density Control},
booktitle = {Proceedings of the 1999 Conference on Asia South Pacific Design Automation,
Wanchai, Hong Kong, China, January 18-21, 1999},
pages = {221--224},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/ASPDAC.1999.760000},
doi = {10.1109/ASPDAC.1999.760000},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aspdac/KahngRSZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aspdac/KahngTZ99,
author = {Andrew B. Kahng and
Paul Tucker and
Alexander Zelikovsky},
title = {Optimization of Linear Placements for Wirelength Minimization with
Free Sites},
booktitle = {Proceedings of the 1999 Conference on Asia South Pacific Design Automation,
Wanchai, Hong Kong, China, January 18-21, 1999},
pages = {241--244},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/ASPDAC.1999.760005},
doi = {10.1109/ASPDAC.1999.760005},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aspdac/KahngTZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/ChenKQZ99,
author = {Yu Chen and
Andrew B. Kahng and
Gang Qu and
Alexander Zelikovsky},
editor = {Jacob K. White and
Ellen Sentovich},
title = {The associative-skew clock routing problem},
booktitle = {Proceedings of the 1999 {IEEE/ACM} International Conference on Computer-Aided
Design, 1999, San Jose, California, USA, November 7-11, 1999},
pages = {168--172},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/ICCAD.1999.810643},
doi = {10.1109/ICCAD.1999.810643},
timestamp = {Mon, 08 May 2023 21:43:38 +0200},
biburl = {https://dblp.org/rec/conf/iccad/ChenKQZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/BermanKVWZ99,
author = {Piotr Berman and
Andrew B. Kahng and
Devendra Vidhani and
Huijuan Wang and
Alexander Zelikovsky},
editor = {D. F. Wong},
title = {Optimal phase conflict removal for layout of dark field alternating
phase shifting masks},
booktitle = {Proceedings of the 1999 International Symposium on Physical Design,
{ISPD} 1999, Monterey, CA, USA, April 12-14, 1999},
pages = {121--126},
publisher = {{ACM}},
year = {1999},
url = {https://doi.org/10.1145/299996.300037},
doi = {10.1145/299996.300037},
timestamp = {Sun, 02 Oct 2022 16:10:02 +0200},
biburl = {https://dblp.org/rec/conf/ispd/BermanKVWZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vlsid/KahngRSZ99,
author = {Andrew B. Kahng and
Gabriel Robins and
Anish Singh and
Alexander Zelikovsky},
title = {New and Exact Filling Algorithms for Layout Density Control},
booktitle = {12th International Conference on {VLSI} Design {(VLSI} Design 1999),
10-13 January 1999, Goa, India},
pages = {106--110},
publisher = {{IEEE} Computer Society},
year = {1999},
url = {https://doi.org/10.1109/ICVD.1999.745133},
doi = {10.1109/ICVD.1999.745133},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/vlsid/KahngRSZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/BermanKVZ99,
author = {Piotr Berman and
Andrew B. Kahng and
Devendra Vidhani and
Alexander Zelikovsky},
editor = {Frank K. H. A. Dehne and
Arvind Gupta and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Roberto Tamassia},
title = {The T-join Problem in Sparse Graphs: Applications to Phase Assignment
Problem in {VLSI} Mask Layout},
booktitle = {Algorithms and Data Structures, 6th International Workshop, {WADS}
'99, Vancouver, British Columbia, Canada, August 11-14, 1999, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1663},
pages = {25--36},
publisher = {Springer},
year = {1999},
url = {https://doi.org/10.1007/3-540-48447-7\_3},
doi = {10.1007/3-540-48447-7\_3},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wads/BermanKVZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/HelvigRZ98,
author = {Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Patrick M. Dewilde and
Franz J. Rammig and
Gerry Musgrave},
title = {Improved Approximation Bounds for the Group Steiner Problem},
booktitle = {1998 Design, Automation and Test in Europe {(DATE} '98), February
23-26, 1998, Le Palais des Congr{\`{e}}s de Paris, Paris, France},
pages = {406--413},
publisher = {{IEEE} Computer Society},
year = {1998},
url = {https://doi.org/10.1109/DATE.1998.655889},
doi = {10.1109/DATE.1998.655889},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/date/HelvigRZ98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/HelvigRZ98,
author = {Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Gianfranco Bilardi and
Giuseppe F. Italiano and
Andrea Pietracaprina and
Geppino Pucci},
title = {Moving-Target {TSP} and Related Problems},
booktitle = {Algorithms - {ESA} '98, 6th Annual European Symposium, Venice, Italy,
August 24-26, 1998, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1461},
pages = {453--464},
publisher = {Springer},
year = {1998},
url = {https://doi.org/10.1007/3-540-68530-8\_38},
doi = {10.1007/3-540-68530-8\_38},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/esa/HelvigRZ98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/CaldwellKMMZ98,
author = {Andrew E. Caldwell and
Andrew B. Kahng and
Stefanus Mantik and
Igor L. Markov and
Alexander Zelikovsky},
editor = {Majid Sarrafzadeh},
title = {On wirelength estimations for row-based placement},
booktitle = {Proceedings of the 1998 International Symposium on Physical Design,
{ISPD} 1998, Monterey, CA, USA, April 6-8, 1998},
pages = {4--11},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/274535.274536},
doi = {10.1145/274535.274536},
timestamp = {Tue, 06 Nov 2018 11:07:47 +0100},
biburl = {https://dblp.org/rec/conf/ispd/CaldwellKMMZ98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/KahngRSWZ98,
author = {Andrew B. Kahng and
Gabriel Robins and
Anish Singh and
Huijuan Wang and
Alexander Zelikovsky},
editor = {Majid Sarrafzadeh},
title = {Filling and slotting: analysis and algorithms},
booktitle = {Proceedings of the 1998 International Symposium on Physical Design,
{ISPD} 1998, Monterey, CA, USA, April 6-8, 1998},
pages = {95--102},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/274535.274549},
doi = {10.1145/274535.274549},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ispd/KahngRSWZ98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/Zelikovsky97,
author = {Alexander Zelikovsky},
title = {A Series of Approximation Algorithms for the Acyclic Directed Steiner
Tree Problem},
journal = {Algorithmica},
volume = {18},
number = {1},
pages = {99--110},
year = {1997},
url = {https://doi.org/10.1007/BF02523690},
doi = {10.1007/BF02523690},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/Zelikovsky97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dcg/FossmeierKZ97,
author = {Ulrich F{\"{o}}{\ss}meier and
Michael Kaufmann and
Alexander Zelikovsky},
title = {Faster Approximation Algorithms for the Rectilinear Steiner Tree Problem},
journal = {Discret. Comput. Geom.},
volume = {18},
number = {1},
pages = {93--109},
year = {1997},
url = {https://doi.org/10.1007/PL00009310},
doi = {10.1007/PL00009310},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dcg/FossmeierKZ97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/KarpinskiZ97,
author = {Marek Karpinski and
Alexander Zelikovsky},
title = {New Approximation Algorithms for the Steiner Tree Problems},
journal = {J. Comb. Optim.},
volume = {1},
number = {1},
pages = {47--65},
year = {1997},
url = {https://doi.org/10.1023/A:1009758919736},
doi = {10.1023/A:1009758919736},
timestamp = {Tue, 06 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jco/KarpinskiZ97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/KarpinskiZ97,
author = {Marek Karpinski and
Alexander Zelikovsky},
editor = {Panos M. Pardalos and
Ding{-}Zhu Du},
title = {Approximating dense cases of covering problems},
booktitle = {Network Design: Connectivity and Facilities Location, Proceedings
of a {DIMACS} Workshop, Princetin, New Jersey, USA, April 28-30, 1997},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {40},
pages = {169--178},
publisher = {{DIMACS/AMS}},
year = {1997},
url = {https://doi.org/10.1090/dimacs/040/11},
doi = {10.1090/DIMACS/040/11},
timestamp = {Mon, 22 May 2023 16:07:35 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/KarpinskiZ97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispd/BatemanHRZ97,
author = {C. Douglass Bateman and
Christopher S. Helvig and
Gabriel Robins and
Alexander Zelikovsky},
editor = {Andrew B. Kahng and
Majid Sarrafzadeh},
title = {Provably good routing tree construction with multi-port terminals},
booktitle = {Proceedings of the 1997 International Symposium on Physical Design,
{ISPD} 1997, Napa Valley, California, USA, April 14-16, 1997},
pages = {96--102},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267665.267697},
doi = {10.1145/267665.267697},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ispd/BatemanHRZ97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR97-004,
author = {Marek Karpinski and
Alexander Zelikovsky},
title = {Approximating Dense Cases of Covering Problems},
journal = {Electron. Colloquium Comput. Complex.},
volume = {{TR97-004}},
year = {1997},
url = {https://eccc.weizmann.ac.il/eccc-reports/1997/TR97-004/index.html},
eprinttype = {ECCC},
eprint = {TR97-004},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eccc/ECCC-TR97-004.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR97-017,
author = {Marek Karpinski and
Juergen Wirtgen and
Alexander Zelikovsky},
title = {An Approximation Algorithm for the Bandwidth Problem on Dense Graphs},
journal = {Electron. Colloquium Comput. Complex.},
volume = {{TR97-017}},
year = {1997},
url = {https://eccc.weizmann.ac.il/eccc-reports/1997/TR97-017/index.html},
eprinttype = {ECCC},
eprint = {TR97-017},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eccc/ECCC-TR97-017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/Hwan-GueZ95,
author = {Cho Hwan{-}Gue and
Alexander Zelikovsky},
editor = {John Staples and
Peter Eades and
Naoki Katoh and
Alistair Moffat},
title = {Spanning Closed Trail and Hamiltonian Cycle in Grid Graphs},
booktitle = {Algorithms and Computation, 6th International Symposium, {ISAAC} '95,
Cairns, Australia, December 4-6, 1995, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1004},
pages = {342--351},
publisher = {Springer},
year = {1995},
url = {https://doi.org/10.1007/BFb0015440},
doi = {10.1007/BFB0015440},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/Hwan-GueZ95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR95-003,
author = {Marek Karpinski and
Alexander Zelikovsky},
title = {1.757 and 1.267 - Approximation Algorithms for the Network and Rectilinear
Steiner Tree Problems},
journal = {Electron. Colloquium Comput. Complex.},
volume = {{TR95-003}},
year = {1995},
url = {https://eccc.weizmann.ac.il/eccc-reports/1995/TR95-003/index.html},
eprinttype = {ECCC},
eprint = {TR95-003},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eccc/ECCC-TR95-003.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR95-030,
author = {Marek Karpinski and
Alexander Zelikovsky},
title = {New Approximation Algorithms for the Steiner Tree Problems},
journal = {Electron. Colloquium Comput. Complex.},
volume = {{TR95-030}},
year = {1995},
url = {https://eccc.weizmann.ac.il/eccc-reports/1995/TR95-030/index.html},
eprinttype = {ECCC},
eprint = {TR95-030},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eccc/ECCC-TR95-030.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/BermanFKKZ94,
author = {Piotr Berman and
Ulrich F{\"{o}}{\ss}meier and
Marek Karpinski and
Michael Kaufmann and
Alexander Zelikovsky},
editor = {Jan van Leeuwen},
title = {Approaching the 5/4-Approximation for Rectilinear Steiner Trees},
booktitle = {Algorithms - {ESA} '94, Second Annual European Symposium, Utrecht,
The Netherlands, September 26-28, 1994, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {855},
pages = {60--71},
publisher = {Springer},
year = {1994},
url = {https://doi.org/10.1007/BFb0049397},
doi = {10.1007/BFB0049397},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/esa/BermanFKKZ94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/Zelikovsky93,
author = {Alexander Zelikovsky},
title = {An 11/6-Approximation Algorithm for the Network Steiner Problem},
journal = {Algorithmica},
volume = {9},
number = {5},
pages = {463--470},
year = {1993},
url = {https://doi.org/10.1007/BF01187035},
doi = {10.1007/BF01187035},
timestamp = {Mon, 05 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/Zelikovsky93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csjm/Zelikovsky93,
author = {Alexander Zelikovsky},
title = {The last achievements in Steiner tree approximations},
journal = {Comput. Sci. J. Moldova},
volume = {1},
number = {1},
pages = {35--44},
year = {1993},
url = {http://www.math.md/publications/csjm/issues/v1-n1/7745/},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/csjm/Zelikovsky93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/Zelikovsky93,
author = {Alexander Zelikovsky},
title = {A Faster Approximation Algorithm for the Steiner Tree Problem in Graphs},
journal = {Inf. Process. Lett.},
volume = {46},
number = {2},
pages = {79--83},
year = {1993},
url = {https://doi.org/10.1016/0020-0190(93)90201-J},
doi = {10.1016/0020-0190(93)90201-J},
timestamp = {Tue, 06 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/Zelikovsky93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipco/Zelikovsky93,
author = {Alexander Zelikovsky},
editor = {Giovanni Rinaldi and
Laurence A. Wolsey},
title = {An approximation algorithm for weighted itk-polymatroids and the Steiner
tree problem in graphs},
booktitle = {Proceedings of the 3rd Integer Programming and Combinatorial Optimization
Conference, Erice, Italy, April 29 - May 1, 1993},
pages = {89--98},
publisher = {{CIACO}},
year = {1993},
timestamp = {Wed, 09 Oct 2002 11:26:33 +0200},
biburl = {https://dblp.org/rec/conf/ipco/Zelikovsky93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/FossmeierKZ93,
author = {Ulrich F{\"{o}}{\ss}meier and
Michael Kaufmann and
Alexander Zelikovsky},
editor = {Kam{-}Wing Ng and
Prabhakar Raghavan and
N. V. Balasubramanian and
Francis Y. L. Chin},
title = {Faster Approximation Algorithms for the Rectilinear Steiner Tree Problem},
booktitle = {Algorithms and Computation, 4th International Symposium, {ISAAC} '93,
Hong Kong, December 15-17, 1993, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {762},
pages = {533--542},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/3-540-57568-5\_285},
doi = {10.1007/3-540-57568-5\_285},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/FossmeierKZ93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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