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BibTeX records: Paul A. Thiessen
@article{DBLP:journals/jcheminf/VaitkusMSQTBG23, author = {Antanas Vaitkus and Andrius Merkys and Thomas Sander and Miguel Quir{\'{o}}s and Paul A. Thiessen and Evan E. Bolton and Saulius Grazulis}, title = {A workflow for deriving chemical entities from crystallographic data and its application to the Crystallography Open Database}, journal = {J. Cheminformatics}, volume = {15}, number = {1}, pages = {123}, year = {2023}, url = {https://doi.org/10.1186/s13321-023-00780-2}, doi = {10.1186/S13321-023-00780-2}, timestamp = {Fri, 26 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/VaitkusMSQTBG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimCCGHHLSTYZZB23, author = {Sunghwan Kim and Jie Chen and Tiejun Cheng and Asta Gindulyte and Jia He and Siqian He and Qingliang Li and Benjamin A. Shoemaker and Paul A. Thiessen and Bo Yu and Leonid Zaslavsky and Jian Zhang and Evan E. Bolton}, title = {PubChem 2023 update}, journal = {Nucleic Acids Res.}, volume = {51}, number = {{D1}}, pages = {1373--1380}, year = {2023}, url = {https://doi.org/10.1093/nar/gkac956}, doi = {10.1093/NAR/GKAC956}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KimCCGHHLSTYZZB23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/frma/ZaslavskyCGHKLT21, author = {Leonid Zaslavsky and Tiejun Cheng and Asta Gindulyte and Siqian He and Sunghwan Kim and Qingliang Li and Paul A. Thiessen and Bo Yu and Evan Bolton}, title = {Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem}, journal = {Frontiers Res. Metrics Anal.}, volume = {6}, pages = {689059}, year = {2021}, url = {https://doi.org/10.3389/frma.2021.689059}, doi = {10.3389/FRMA.2021.689059}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/frma/ZaslavskyCGHKLT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/SchymanskiKNTZB21, author = {Emma Schymanski and Todor Kondic and Steffen Neumann and Paul A. Thiessen and Jian Zhang and Evan Bolton}, title = {Empowering large chemical knowledge bases for exposomics: PubChemLite meets MetFrag}, journal = {J. Cheminformatics}, volume = {13}, number = {1}, pages = {19}, year = {2021}, url = {https://doi.org/10.1186/s13321-021-00489-0}, doi = {10.1186/S13321-021-00489-0}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/SchymanskiKNTZB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/GoodmanPTBH21, author = {Jonathan M. Goodman and Igor V. Pletnev and Paul A. Thiessen and Evan Bolton and Stephen R. Heller}, title = {InChI version 1.06: now more than 99.99{\%} reliable}, journal = {J. Cheminformatics}, volume = {13}, number = {1}, pages = {40}, year = {2021}, url = {https://doi.org/10.1186/s13321-021-00517-z}, doi = {10.1186/S13321-021-00517-Z}, timestamp = {Sat, 31 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcheminf/GoodmanPTBH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/00020CGHHLSTYZ021, author = {Sunghwan Kim and Jie Chen and Tiejun Cheng and Asta Gindulyte and Jia He and Siqian He and Qingliang Li and Benjamin A. Shoemaker and Paul A. Thiessen and Bo Yu and Leonid Zaslavsky and Jian Zhang and Evan Bolton}, title = {PubChem in 2021: new data content and improved web interfaces}, journal = {Nucleic Acids Res.}, volume = {49}, number = {Database-Issue}, pages = {D1388--D1395}, year = {2021}, url = {https://doi.org/10.1093/nar/gkaa971}, doi = {10.1093/NAR/GKAA971}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/00020CGHHLSTYZ021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/KimTCZGB19, author = {Sunghwan Kim and Paul A. Thiessen and Tiejun Cheng and Jian Zhang and Asta Gindulyte and Evan Bolton}, title = {PUG-View: programmatic access to chemical annotations integrated in PubChem}, journal = {J. Cheminformatics}, volume = {11}, number = {1}, pages = {56:1--56:11}, year = {2019}, url = {https://doi.org/10.1186/s13321-019-0375-2}, doi = {10.1186/S13321-019-0375-2}, timestamp = {Thu, 28 Nov 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/KimTCZGB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimCCGHHLSTYZZB19, author = {Sunghwan Kim and Jie Chen and Tiejun Cheng and Asta Gindulyte and Jia He and Siqian He and Qingliang Li and Benjamin A. Shoemaker and Paul A. Thiessen and Bo Yu and Leonid Zaslavsky and Jian Zhang and Evan Bolton}, title = {PubChem 2019 update: improved access to chemical data}, journal = {Nucleic Acids Res.}, volume = {47}, number = {Database-Issue}, pages = {D1102--D1109}, year = {2019}, url = {https://doi.org/10.1093/nar/gky1033}, doi = {10.1093/NAR/GKY1033}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KimCCGHHLSTYZZB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimTCYB18, author = {Sunghwan Kim and Paul A. Thiessen and Tiejun Cheng and Bo Yu and Evan Bolton}, title = {An update on {PUG-REST:} RESTful interface for programmatic access to PubChem}, journal = {Nucleic Acids Res.}, volume = {46}, number = {Webserver-Issue}, pages = {W563--W570}, year = {2018}, url = {https://doi.org/10.1093/nar/gky294}, doi = {10.1093/NAR/GKY294}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KimTCYB18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WangBCWGSTHZ17, author = {Yanli Wang and Stephen H. Bryant and Tiejun Cheng and Jiyao Wang and Asta Gindulyte and Benjamin A. Shoemaker and Paul A. Thiessen and Siqian He and Jian Zhang}, title = {PubChem BioAssay: 2017 update}, journal = {Nucleic Acids Res.}, volume = {45}, number = {Database-Issue}, pages = {D955--D963}, year = {2017}, url = {https://doi.org/10.1093/nar/gkw1118}, doi = {10.1093/NAR/GKW1118}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WangBCWGSTHZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/0002TCYSWBWB16, author = {Sunghwan Kim and Paul A. Thiessen and Tiejun Cheng and Bo Yu and Benjamin A. Shoemaker and Jiyao Wang and Evan Bolton and Yanli Wang and Stephen H. Bryant}, title = {Literature information in PubChem: associations between PubChem records and scientific articles}, journal = {J. Cheminformatics}, volume = {8}, number = {1}, pages = {32:1--32:15}, year = {2016}, url = {https://doi.org/10.1186/s13321-016-0142-6}, doi = {10.1186/S13321-016-0142-6}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/0002TCYSWBWB16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimTBCFGHHHSWYZ16, author = {Sunghwan Kim and Paul A. Thiessen and Evan Bolton and Jie Chen and Gang Fu and Asta Gindulyte and Lianyi Han and Jane He and Siqian He and Benjamin A. Shoemaker and Jiyao Wang and Bo Yu and Jian Zhang and Stephen H. Bryant}, title = {PubChem Substance and Compound databases}, journal = {Nucleic Acids Res.}, volume = {44}, number = {Database-Issue}, pages = {1202--1213}, year = {2016}, url = {https://doi.org/10.1093/nar/gkv951}, doi = {10.1093/NAR/GKV951}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KimTBCFGHHHSWYZ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimTBB15, author = {Sunghwan Kim and Paul A. Thiessen and Evan Bolton and Stephen H. Bryant}, title = {{PUG-SOAP} and {PUG-REST:} web services for programmatic access to chemical information in PubChem}, journal = {Nucleic Acids Res.}, volume = {43}, number = {Webserver-Issue}, pages = {W605--W611}, year = {2015}, url = {https://doi.org/10.1093/nar/gkv396}, doi = {10.1093/NAR/GKV396}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KimTBB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MadejLZTGMB14, author = {Thomas Madej and Christopher J. Lanczycki and Dachuan Zhang and Paul A. Thiessen and Renata C. Geer and Aron Marchler{-}Bauer and Stephen H. Bryant}, title = {{MMDB} and {VAST+:} tracking structural similarities between macromolecular complexes}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Database-Issue}, pages = {297--303}, year = {2014}, url = {https://doi.org/10.1093/nar/gkt1208}, doi = {10.1093/NAR/GKT1208}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MadejLZTGMB14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MadejAFGGLLLMPCTWZB12, author = {Thomas Madej and Kenneth J. Addess and Jessica H. Fong and Lewis Y. Geer and Renata C. Geer and Christopher J. Lanczycki and Chunlei Liu and Shennan Lu and Aron Marchler{-}Bauer and Anna R. Panchenko and Jie Chen and Paul A. Thiessen and Yanli Wang and Dachuan Zhang and Stephen H. Bryant}, title = {{MMDB:} 3D structures and macromolecular interactions}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {461--464}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr1162}, doi = {10.1093/NAR/GKR1162}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/MadejAFGGLLLMPCTWZB12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcheminf/BoltonCKHHSSSTWYZB11, author = {Evan Bolton and Jie Chen and Sunghwan Kim and Lianyi Han and Siqian He and Wenyao Shi and Vahan Simonyan and Yan Sun and Paul A. Thiessen and Jiyao Wang and Bo Yu and Jian Zhang and Stephen H. Bryant}, title = {PubChem3D: a new resource for scientists}, journal = {J. Cheminformatics}, volume = {3}, pages = {32}, year = {2011}, url = {https://doi.org/10.1186/1758-2946-3-32}, doi = {10.1186/1758-2946-3-32}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/BoltonCKHHSSSTWYZB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChakrabartiLPPTB10, author = {Saikat Chakrabarti and Christopher J. Lanczycki and Anna R. Panchenko and Teresa M. Przytycka and Paul A. Thiessen and Stephen H. Bryant}, title = {State of the art: refinement of multiple sequence alignments}, journal = {{BMC} Bioinform.}, volume = {11}, pages = {3}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-3}, doi = {10.1186/1471-2105-11-3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChakrabartiLPPTB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WangACGHHLMMTZB07, author = {Yanli Wang and Kenneth J. Addess and Jie Chen and Lewis Y. Geer and Jane He and Siqian He and Shennan Lu and Thomas Madej and Aron Marchler{-}Bauer and Paul A. Thiessen and Naigong Zhang and Stephen H. Bryant}, title = {{MMDB:} annotating protein sequences with Entrez's 3D-structure database}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {298--300}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl952}, doi = {10.1093/NAR/GKL952}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/WangACGHHLMMTZB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ChakrabartiLPPTB06, author = {Saikat Chakrabarti and Christopher J. Lanczycki and Anna R. Panchenko and Teresa M. Przytycka and Paul A. Thiessen and Stephen H. Bryant}, title = {State of the art: refinement of multiple sequence alignments}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {499}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-499}, doi = {10.1186/1471-2105-7-499}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ChakrabartiLPPTB06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KannTPSAB05, author = {Maricel G. Kann and Paul A. Thiessen and Anna R. Panchenko and Alejandro A. Sch{\"{a}}ffer and Stephen F. Altschul and Stephen H. Bryant}, title = {A structure-based method for protein sequence alignment}, journal = {Bioinform.}, volume = {21}, number = {8}, pages = {1451--1456}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti233}, doi = {10.1093/BIOINFORMATICS/BTI233}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KannTPSAB05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05, author = {Aron Marchler{-}Bauer and John B. Anderson and Praveen F. Cherukuri and Carol DeWeese{-}Scott and Lewis Y. Geer and Marc Gwadz and Siqian He and David I. Hurwitz and John D. Jackson and Zhaoxi Ke and Christopher J. Lanczycki and Cynthia A. Liebert and Chunlei Liu and Fu Lu and Gabriele H. Marchler and Mikhail Mullokandov and Benjamin A. Shoemaker and Vahan Simonyan and James S. Song and Paul A. Thiessen and Roxanne A. Yamashita and Jodie J. Yin and Dachuan Zhang and Stephen H. Bryant}, title = {{CDD:} a Conserved Domain Database for protein classification}, journal = {Nucleic Acids Res.}, volume = {33}, number = {Database-Issue}, pages = {192--196}, year = {2005}, url = {https://doi.org/10.1093/nar/gki069}, doi = {10.1093/NAR/GKI069}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03, author = {Aron Marchler{-}Bauer and John B. Anderson and Carol DeWeese{-}Scott and Natalie D. Fedorova and Lewis Y. Geer and Siqian He and David I. Hurwitz and John D. Jackson and Aviva R. Jacobs and Christopher J. Lanczycki and Cynthia A. Liebert and Chunlei Liu and Thomas Madej and Gabriele H. Marchler and Raja Mazumder and Anastasia N. Nikolskaya and Anna R. Panchenko and Bachoti S. Rao and Benjamin A. Shoemaker and Vahan Simonyan and James S. Song and Paul A. Thiessen and Sona Vasudevan and Yanli Wang and Roxanne A. Yamashita and Jodie J. Yin and Stephen H. Bryant}, title = {{CDD:} a curated Entrez database of conserved domain alignments}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {383--387}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg087}, doi = {10.1093/NAR/GKG087}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03, author = {Jie Chen and John B. Anderson and Carol DeWeese{-}Scott and Natalie D. Fedorova and Lewis Y. Geer and Siqian He and David I. Hurwitz and John D. Jackson and Aviva R. Jacobs and Christopher J. Lanczycki and Cynthia A. Liebert and Chunlei Liu and Thomas Madej and Aron Marchler{-}Bauer and Gabriele H. Marchler and Raja Mazumder and Anastasia N. Nikolskaya and Bachoti S. Rao and Anna R. Panchenko and Benjamin A. Shoemaker and Vahan Simonyan and James S. Song and Paul A. Thiessen and Sona Vasudevan and Yanli Wang and Roxanne A. Yamashita and Jodie J. Yin and Stephen H. Bryant}, title = {{MMDB:} Entrez's 3D-structure database}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {474--477}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg086}, doi = {10.1093/NAR/GKG086}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WangACGHHLMMMPSSTYB03, author = {Yanli Wang and John B. Anderson and Jie Chen and Lewis Y. Geer and Siqian He and David I. Hurwitz and Cynthia A. Liebert and Thomas Madej and Gabriele H. Marchler and Aron Marchler{-}Bauer and Anna R. Panchenko and Benjamin A. Shoemaker and James S. Song and Paul A. Thiessen and Roxanne A. Yamashita and Stephen H. Bryant}, title = {{MMDB:} Entrez's 3D-structure database}, journal = {Nucleic Acids Res.}, volume = {30}, number = {1}, pages = {249--252}, year = {2002}, url = {https://doi.org/10.1093/nar/30.1.249}, doi = {10.1093/NAR/30.1.249}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WangACGHHLMMMPSSTYB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Marchler-BauerPSTGB03, author = {Aron Marchler{-}Bauer and Anna R. Panchenko and Benjamin A. Shoemaker and Paul A. Thiessen and Lewis Y. Geer and Stephen H. Bryant}, title = {{CDD:} a database of conserved domain alignments with links to domain three-dimensional structure}, journal = {Nucleic Acids Res.}, volume = {30}, number = {1}, pages = {281--283}, year = {2002}, url = {https://doi.org/10.1093/nar/30.1.281}, doi = {10.1093/NAR/30.1.281}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerPSTGB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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