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ORCIDBibTeX records: Wing-Kin Sung
@inproceedings{DBLP:conf/stacs/0001STY24,
author = {Jesper Jansson and
Wing{-}Kin Sung and
Seyed Ali Tabatabaee and
Yutong Yang},
editor = {Olaf Beyersdorff and
Mamadou Moustapha Kant{\'{e}} and
Orna Kupferman and
Daniel Lokshtanov},
title = {A Faster Algorithm for Constructing the Frequency Difference Consensus
Tree},
booktitle = {41st International Symposium on Theoretical Aspects of Computer Science,
{STACS} 2024, March 12-14, 2024, Clermont-Ferrand, France},
series = {LIPIcs},
volume = {289},
pages = {43:1--43:17},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2024},
url = {https://doi.org/10.4230/LIPIcs.STACS.2024.43},
doi = {10.4230/LIPICS.STACS.2024.43},
timestamp = {Mon, 11 Mar 2024 15:43:27 +0100},
biburl = {https://dblp.org/rec/conf/stacs/0001STY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/ZhengSS23,
author = {Yan Zheng and
Xuequn Shang and
Wing{-}Kin Sung},
title = {SVsearcher: {A} more accurate structural variation detection method
in long read data},
journal = {Comput. Biol. Medicine},
volume = {158},
pages = {106843},
year = {2023},
url = {https://doi.org/10.1016/j.compbiomed.2023.106843},
doi = {10.1016/J.COMPBIOMED.2023.106843},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/ZhengSS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/OnerKLS23,
author = {Mustafa Umit Oner and
Jared Marc Song Kye{-}Jet and
Hwee Kuan Lee and
Wing{-}Kin Sung},
title = {Distribution based {MIL} pooling filters: Experiments on a lymph node
metastases dataset},
journal = {Medical Image Anal.},
volume = {87},
pages = {102813},
year = {2023},
url = {https://doi.org/10.1016/j.media.2023.102813},
doi = {10.1016/J.MEDIA.2023.102813},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mia/OnerKLS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/HampsonHI0LS23,
author = {Christopher Hampson and
Daniel J. Harvey and
Costas S. Iliopoulos and
Jesper Jansson and
Zara Lim and
Wing{-}Kin Sung},
editor = {Laurent Bulteau and
Zsuzsanna Lipt{\'{a}}k},
title = {MUL-Tree Pruning for Consistency and Compatibility},
booktitle = {34th Annual Symposium on Combinatorial Pattern Matching, {CPM} 2023,
June 26-28, 2023, Marne-la-Vall{\'{e}}e, France},
series = {LIPIcs},
volume = {259},
pages = {14:1--14:18},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2023},
url = {https://doi.org/10.4230/LIPIcs.CPM.2023.14},
doi = {10.4230/LIPICS.CPM.2023.14},
timestamp = {Wed, 21 Jun 2023 16:06:33 +0200},
biburl = {https://dblp.org/rec/conf/cpm/HampsonHI0LS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/walcom/GrossiIJLSZ23,
author = {Roberto Grossi and
Costas S. Iliopoulos and
Jesper Jansson and
Zara Lim and
Wing{-}Kin Sung and
Wiktor Zuba},
editor = {Chun{-}Cheng Lin and
Bertrand M. T. Lin and
Giuseppe Liotta},
title = {Finding the Cyclic Covers of a String},
booktitle = {{WALCOM:} Algorithms and Computation - 17th International Conference
and Workshops, {WALCOM} 2023, Hsinchu, Taiwan, March 22-24, 2023,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13973},
pages = {139--150},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-27051-2\_13},
doi = {10.1007/978-3-031-27051-2\_13},
timestamp = {Tue, 28 Mar 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/walcom/GrossiIJLSZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhouGZCZWXSL22,
author = {Qiangwei Zhou and
Pengpeng Guan and
Zhixian Zhu and
Sheng Cheng and
Cong Zhou and
Huanhuan Wang and
Qian Xu and
Wing{-}Kin Sung and
Guoliang Li},
title = {ASMdb: a comprehensive database for allele-specific {DNA} methylation
in diverse organisms},
journal = {Nucleic Acids Res.},
volume = {50},
number = {{D1}},
pages = {60--71},
year = {2022},
url = {https://doi.org/10.1093/nar/gkab937},
doi = {10.1093/NAR/GKAB937},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhouGZCZWXSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/patterns/OnerCRJHKATCLTZ22,
author = {Mustafa Umit Oner and
Jianbin Chen and
Egor Revkov and
Anne James and
Seow Ye Heng and
Arife Neslihan Kaya and
Jacob Josiah Santiago Alvarez and
Angela Takano and
Xin Min Cheng and
Tony Kiat Hon Lim and
Daniel Shao{-}Weng Tan and
Weiwei Zhai and
Anders Jacobsen Skanderup and
Wing{-}Kin Sung and
Hwee Kuan Lee},
title = {Obtaining spatially resolved tumor purity maps using deep multiple
instance learning in a pan-cancer study},
journal = {Patterns},
volume = {3},
number = {2},
pages = {100399},
year = {2022},
url = {https://doi.org/10.1016/j.patter.2021.100399},
doi = {10.1016/J.PATTER.2021.100399},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/patterns/OnerCRJHKATCLTZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/patterns/OnerSL22,
author = {Mustafa Umit Oner and
Wing{-}Kin Sung and
Hwee Kuan Lee},
title = {Oner, Sung, and Lee: Researchers in digital pathology for the future
of modern medicine},
journal = {Patterns},
volume = {3},
number = {2},
pages = {100447},
year = {2022},
url = {https://doi.org/10.1016/j.patter.2022.100447},
doi = {10.1016/J.PATTER.2022.100447},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/patterns/OnerSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/patterns/OnerNGXXSYSWL22,
author = {Mustafa Umit Oner and
Mei Ying Ng and
Danilo Medina Giron and
Cecilia Ee Chen Xi and
Louis Ang Yuan Xiang and
Malay Singh and
Weimiao Yu and
Wing{-}Kin Sung and
Chin Fong Wong and
Hwee Kuan Lee},
title = {An AI-assisted tool for efficient prostate cancer diagnosis in low-grade
and low-volume cases},
journal = {Patterns},
volume = {3},
number = {12},
pages = {100642},
year = {2022},
url = {https://doi.org/10.1016/j.patter.2022.100642},
doi = {10.1016/J.PATTER.2022.100642},
timestamp = {Tue, 31 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/patterns/OnerNGXXSYSWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonMRS21,
author = {Jesper Jansson and
Konstantinos Mampentzidis and
Ramesh Rajaby and
Wing{-}Kin Sung},
title = {Computing the Rooted Triplet Distance Between Phylogenetic Networks},
journal = {Algorithmica},
volume = {83},
number = {6},
pages = {1786--1828},
year = {2021},
url = {https://doi.org/10.1007/s00453-021-00802-1},
doi = {10.1007/S00453-021-00802-1},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonMRS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RajabyS21,
author = {Ramesh Rajaby and
Wing{-}Kin Sung},
title = {SurVIndel: improving {CNV} calling from high-throughput sequencing
data through statistical testing},
journal = {Bioinform.},
volume = {37},
number = {11},
pages = {1497--1505},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btz261},
doi = {10.1093/BIOINFORMATICS/BTZ261},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RajabyS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZengZSZLS21,
author = {Xi Zeng and
Linghao Zhao and
Chenhang Shen and
Yi Zhou and
Guoliang Li and
Wing{-}Kin Sung},
title = {{HIVID2:} an accurate tool to detect virus integrations in the host
genome},
journal = {Bioinform.},
volume = {37},
number = {13},
pages = {1821--1827},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btab031},
doi = {10.1093/BIOINFORMATICS/BTAB031},
timestamp = {Thu, 16 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZengZSZLS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgaa/RahmanSS21,
author = {M. Sohel Rahman and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Guest editors' foreword},
journal = {J. Graph Algorithms Appl.},
volume = {25},
number = {2},
pages = {603--604},
year = {2021},
url = {https://doi.org/10.7155/jgaa.00577},
doi = {10.7155/JGAA.00577},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jgaa/RahmanSS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/SarkerSR21,
author = {Anik Sarker and
Wing{-}Kin Sung and
M. Sohel Rahman},
title = {A linear time algorithm for the \emph{r}-gathering problem on the
line},
journal = {Theor. Comput. Sci.},
volume = {866},
pages = {96--106},
year = {2021},
url = {https://doi.org/10.1016/j.tcs.2021.03.015},
doi = {10.1016/J.TCS.2021.03.015},
timestamp = {Tue, 13 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/SarkerSR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouWLSL20,
author = {Qiangwei Zhou and
Ze Wang and
Jing Li and
Wing{-}Kin Sung and
Guoliang Li},
title = {MethHaplo: combining allele-specific {DNA} methylation and SNPs for
haplotype region identification},
journal = {{BMC} Bioinform.},
volume = {21},
number = {1},
pages = {451},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03798-7},
doi = {10.1186/S12859-020-03798-7},
timestamp = {Mon, 26 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouWLSL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/AlamroAIPSW20,
author = {Hayam Alamro and
Mai Alzamel and
Costas S. Iliopoulos and
Solon P. Pissis and
Wing{-}Kin Sung and
Steven Watts},
title = {Efficient Identification of k-Closed Strings},
journal = {Int. J. Found. Comput. Sci.},
volume = {31},
number = {5},
pages = {595--610},
year = {2020},
url = {https://doi.org/10.1142/s0129054120500288},
doi = {10.1142/S0129054120500288},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijfcs/AlamroAIPSW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/AlzamelCIPRS20,
author = {Mai Alzamel and
Panagiotis Charalampopoulos and
Costas S. Iliopoulos and
Solon P. Pissis and
Jakub Radoszewski and
Wing{-}Kin Sung},
title = {Faster algorithms for 1-mappability of a sequence},
journal = {Theor. Comput. Sci.},
volume = {812},
pages = {2--12},
year = {2020},
url = {https://doi.org/10.1016/j.tcs.2019.04.026},
doi = {10.1016/J.TCS.2019.04.026},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/AlzamelCIPRS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/OnerLS20,
author = {Mustafa Umit Oner and
Hwee Kuan Lee and
Wing{-}Kin Sung},
title = {Weakly Supervised Clustering by Exploiting Unique Class Count},
booktitle = {8th International Conference on Learning Representations, {ICLR} 2020,
Addis Ababa, Ethiopia, April 26-30, 2020},
publisher = {OpenReview.net},
year = {2020},
url = {https://openreview.net/forum?id=B1xIj3VYvr},
timestamp = {Thu, 07 May 2020 17:11:47 +0200},
biburl = {https://dblp.org/rec/conf/iclr/OnerLS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/walcom/2020,
editor = {M. Sohel Rahman and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {{WALCOM:} Algorithms and Computation - 14th International Conference,
{WALCOM} 2020, Singapore, March 31 - April 2, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12049},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-39881-1},
doi = {10.1007/978-3-030-39881-1},
isbn = {978-3-030-39880-4},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/walcom/2020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-01561,
author = {Mustafa Umit Oner and
Jared Marc Song Kye{-}Jet and
Hwee Kuan Lee and
Wing{-}Kin Sung},
title = {Studying The Effect of {MIL} Pooling Filters on {MIL} Tasks},
journal = {CoRR},
volume = {abs/2006.01561},
year = {2020},
url = {https://arxiv.org/abs/2006.01561},
eprinttype = {arXiv},
eprint = {2006.01561},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-01561.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouLSL19,
author = {Qiangwei Zhou and
Jing{-}Quan Lim and
Wing{-}Kin Sung and
Guoliang Li},
title = {An integrated package for bisulfite {DNA} methylation data analysis
with Indel-sensitive mapping},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {47:1--47:11},
year = {2019},
url = {https://doi.org/10.1186/s12859-018-2593-4},
doi = {10.1186/S12859-018-2593-4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouLSL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/JanssonRS19,
author = {Jesper Jansson and
Ramesh Rajaby and
Wing{-}Kin Sung},
title = {An Efficient Algorithm for the Rooted Triplet Distance Between Galled
Trees},
journal = {J. Comput. Biol.},
volume = {26},
number = {9},
pages = {893--907},
year = {2019},
url = {https://doi.org/10.1089/cmb.2019.0033},
doi = {10.1089/CMB.2019.0033},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/JanssonRS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgaa/RahmanSU19,
author = {M. Sohel Rahman and
Wing{-}Kin Sung and
Ryuhei Uehara},
title = {Guest Editors' Foreword},
journal = {J. Graph Algorithms Appl.},
volume = {23},
number = {5},
pages = {755--757},
year = {2019},
url = {https://doi.org/10.7155/jgaa.00510},
doi = {10.7155/JGAA.00510},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jgaa/RahmanSU19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/AlzamelISS19,
author = {Mai Alzamel and
Costas S. Iliopoulos and
W. F. Smyth and
Wing{-}Kin Sung},
title = {Off-line and on-line algorithms for closed string factorization},
journal = {Theor. Comput. Sci.},
volume = {792},
pages = {12--19},
year = {2019},
url = {https://doi.org/10.1016/j.tcs.2018.10.033},
doi = {10.1016/J.TCS.2018.10.033},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/AlzamelISS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/JanssonMRS19,
author = {Jesper Jansson and
Konstantinos Mampentzidis and
Ramesh Rajaby and
Wing{-}Kin Sung},
editor = {Charles J. Colbourn and
Roberto Grossi and
Nadia Pisanti},
title = {Computing the Rooted Triplet Distance Between Phylogenetic Networks},
booktitle = {Combinatorial Algorithms - 30th International Workshop, {IWOCA} 2019,
Pisa, Italy, July 23-25, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11638},
pages = {290--303},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-25005-8\_24},
doi = {10.1007/978-3-030-25005-8\_24},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iwoca/JanssonMRS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/walcom/SarkerSR19,
author = {Anik Sarker and
Wing{-}Kin Sung and
M. Sohel Rahman},
editor = {Gautam K. Das and
Partha Sarathi Mandal and
Krishnendu Mukhopadhyaya and
Shin{-}Ichi Nakano},
title = {A Linear Time Algorithm for the r-Gathering Problem on the Line (Extended
Abstract)},
booktitle = {{WALCOM:} Algorithms and Computation - 13th International Conference,
{WALCOM} 2019, Guwahati, India, February 27 - March 2, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11355},
pages = {56--66},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-10564-8\_5},
doi = {10.1007/978-3-030-10564-8\_5},
timestamp = {Wed, 31 Mar 2021 12:03:13 +0200},
biburl = {https://dblp.org/rec/conf/walcom/SarkerSR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/walcom/Sung19,
author = {Wing{-}Kin Sung},
editor = {Gautam K. Das and
Partha Sarathi Mandal and
Krishnendu Mukhopadhyaya and
Shin{-}Ichi Nakano},
title = {Greedy Consensus Tree and Maximum Greedy Consensus Tree Problems},
booktitle = {{WALCOM:} Algorithms and Computation - 13th International Conference,
{WALCOM} 2019, Guwahati, India, February 27 - March 2, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11355},
pages = {305--316},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-10564-8\_24},
doi = {10.1007/978-3-030-10564-8\_24},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/walcom/Sung19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/Sung19,
author = {Wing{-}Kin Sung},
editor = {Shoba Ranganathan and
Michael Gribskov and
Kenta Nakai and
Christian Sch{\"{o}}nbach},
title = {Learning Chromatin Interaction Using Hi-C Datasets},
booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
2},
pages = {318--323},
publisher = {Elsevier},
year = {2019},
url = {https://doi.org/10.1016/b978-0-12-809633-8.20243-4},
doi = {10.1016/B978-0-12-809633-8.20243-4},
timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/reference/bioinf/Sung19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1906-07647,
author = {Mustafa Umit Oner and
Hwee Kuan Lee and
Wing{-}Kin Sung},
title = {A Weakly Supervised Learning Based Clustering Framework},
journal = {CoRR},
volume = {abs/1906.07647},
year = {2019},
url = {http://arxiv.org/abs/1906.07647},
eprinttype = {arXiv},
eprint = {1906.07647},
timestamp = {Mon, 24 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1906-07647.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/JanssonLRS18,
author = {Jesper Jansson and
Andrzej Lingas and
Ramesh Rajaby and
Wing{-}Kin Sung},
title = {Determining the Consistency of Resolved Triplets and Fan Triplets},
journal = {J. Comput. Biol.},
volume = {25},
number = {7},
pages = {740--754},
year = {2018},
url = {https://doi.org/10.1089/cmb.2017.0256},
doi = {10.1089/CMB.2017.0256},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/JanssonLRS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/JanssonRSS18,
author = {Jesper Jansson and
Ramesh Rajaby and
Chuanqi Shen and
Wing{-}Kin Sung},
title = {Algorithms for the Majority Rule {(+)} Consensus Tree and the Frequency
Difference Consensus Tree},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {1},
pages = {15--26},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2016.2609923},
doi = {10.1109/TCBB.2016.2609923},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/JanssonRSS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/GawrychowskiLSW18,
author = {Pawel Gawrychowski and
Gad M. Landau and
Wing{-}Kin Sung and
Oren Weimann},
editor = {Ioannis Chatzigiannakis and
Christos Kaklamanis and
D{\'{a}}niel Marx and
Donald Sannella},
title = {A Faster Construction of Greedy Consensus Trees},
booktitle = {45th International Colloquium on Automata, Languages, and Programming,
{ICALP} 2018, July 9-13, 2018, Prague, Czech Republic},
series = {LIPIcs},
volume = {107},
pages = {63:1--63:14},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2018},
url = {https://doi.org/10.4230/LIPIcs.ICALP.2018.63},
doi = {10.4230/LIPICS.ICALP.2018.63},
timestamp = {Thu, 23 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icalp/GawrychowskiLSW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iwoca/2018,
editor = {Costas S. Iliopoulos and
Hon Wai Leong and
Wing{-}Kin Sung},
title = {Combinatorial Algorithms - 29th International Workshop, {IWOCA} 2018,
Singapore, July 16-19, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10979},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94667-2},
doi = {10.1007/978-3-319-94667-2},
isbn = {978-3-319-94666-5},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iwoca/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/walcom/2018,
editor = {M. Sohel Rahman and
Wing{-}Kin Sung and
Ryuhei Uehara},
title = {{WALCOM:} Algorithms and Computation - 12th International Conference,
{WALCOM} 2018, Dhaka, Bangladesh, March 3-5, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10755},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-75172-6},
doi = {10.1007/978-3-319-75172-6},
isbn = {978-3-319-75171-9},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/walcom/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TennakoonS17,
author = {Chandana Tennakoon and
Wing{-}Kin Sung},
title = {{BATVI:} Fast, sensitive and accurate detection of virus integrations},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {101--111},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1470-x},
doi = {10.1186/S12859-017-1470-X},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TennakoonS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iandc/JanssonLS17,
author = {Jesper Jansson and
Zhaoxian Li and
Wing{-}Kin Sung},
title = {On finding the Adams consensus tree},
journal = {Inf. Comput.},
volume = {256},
pages = {334--347},
year = {2017},
url = {https://doi.org/10.1016/j.ic.2017.08.002},
doi = {10.1016/J.IC.2017.08.002},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/iandc/JanssonLS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/JanssonRS17,
author = {Jesper Jansson and
Ramesh Rajaby and
Wing{-}Kin Sung},
editor = {Daniel Figueiredo and
Carlos Mart{\'{\i}}n{-}Vide and
Diogo Pratas and
Miguel A. Vega{-}Rodr{\'{\i}}guez},
title = {An Efficient Algorithm for the Rooted Triplet Distance Between Galled
Trees},
booktitle = {Algorithms for Computational Biology - 4th International Conference,
AlCoB 2017, Aveiro, Portugal, June 5-6, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10252},
pages = {115--126},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-58163-7\_8},
doi = {10.1007/978-3-319-58163-7\_8},
timestamp = {Fri, 14 Oct 2022 12:20:24 +0200},
biburl = {https://dblp.org/rec/conf/alcob/JanssonRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoa/AlzamelCIPRS17,
author = {Mai Alzamel and
Panagiotis Charalampopoulos and
Costas S. Iliopoulos and
Solon P. Pissis and
Jakub Radoszewski and
Wing{-}Kin Sung},
editor = {Xiaofeng Gao and
Hongwei Du and
Meng Han},
title = {Faster Algorithms for 1-Mappability of a Sequence},
booktitle = {Combinatorial Optimization and Applications - 11th International Conference,
{COCOA} 2017, Shanghai, China, December 16-18, 2017, Proceedings,
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {10628},
pages = {109--121},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-71147-8\_8},
doi = {10.1007/978-3-319-71147-8\_8},
timestamp = {Tue, 14 Jun 2022 14:15:49 +0200},
biburl = {https://dblp.org/rec/conf/cocoa/AlzamelCIPRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eann/AlamroAIPWS17,
author = {Hayam Alamro and
Mai Alzamel and
Costas S. Iliopoulos and
Solon P. Pissis and
Steven Watts and
Wing{-}Kin Sung},
editor = {Giacomo Boracchi and
Lazaros S. Iliadis and
Chrisina Jayne and
Aristidis Likas},
title = {Efficient Identification of k-Closed Strings},
booktitle = {Engineering Applications of Neural Networks - 18th International Conference,
{EANN} 2017, Athens, Greece, August 25-27, 2017, Proceedings},
series = {Communications in Computer and Information Science},
volume = {744},
pages = {583--595},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-65172-9\_49},
doi = {10.1007/978-3-319-65172-9\_49},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eann/AlamroAIPWS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/RajabyS17,
author = {Ramesh Rajaby and
Wing{-}Kin Sung},
editor = {Ljiljana Brankovic and
Joe Ryan and
William F. Smyth},
title = {Computing Asymmetric Median Tree of Two Trees via Better Bipartite
Matching Algorithm},
booktitle = {Combinatorial Algorithms - 28th International Workshop, {IWOCA} 2017,
Newcastle, NSW, Australia, July 17-21, 2017, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {10765},
pages = {356--367},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-78825-8\_29},
doi = {10.1007/978-3-319-78825-8\_29},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iwoca/RajabyS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/JanssonLRS17,
author = {Jesper Jansson and
Andrzej Lingas and
Ramesh Rajaby and
Wing{-}Kin Sung},
editor = {S{\"{u}}leyman Cenk Sahinalp},
title = {Determining the Consistency of Resolved Triplets and Fan Triplets},
booktitle = {Research in Computational Molecular Biology - 21st Annual International
Conference, {RECOMB} 2017, Hong Kong, China, May 3-7, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10229},
pages = {82--98},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-56970-3\_6},
doi = {10.1007/978-3-319-56970-3\_6},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/JanssonLRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/AlzamelCIPRS17,
author = {Mai Alzamel and
Panagiotis Charalampopoulos and
Costas S. Iliopoulos and
Solon P. Pissis and
Jakub Radoszewski and
Wing{-}Kin Sung},
title = {Faster algorithms for 1-mappability of a sequence},
journal = {CoRR},
volume = {abs/1705.04022},
year = {2017},
url = {http://arxiv.org/abs/1705.04022},
eprinttype = {arXiv},
eprint = {1705.04022},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/AlzamelCIPRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/GawrychowskiLSW17,
author = {Pawel Gawrychowski and
Gad M. Landau and
Wing{-}Kin Sung and
Oren Weimann},
title = {A Faster Construction of Phylogenetic Consensus Trees},
journal = {CoRR},
volume = {abs/1705.10548},
year = {2017},
url = {http://arxiv.org/abs/1705.10548},
eprinttype = {arXiv},
eprint = {1705.10548},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/GawrychowskiLSW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonSVY16,
author = {Jesper Jansson and
Wing{-}Kin Sung and
Hoa Vu and
Siu{-}Ming Yiu},
title = {Faster Algorithms for Computing the R* Consensus Tree},
journal = {Algorithmica},
volume = {76},
number = {4},
pages = {1224--1244},
year = {2016},
url = {https://doi.org/10.1007/s00453-016-0122-2},
doi = {10.1007/S00453-016-0122-2},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonSVY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/JanssonSS16,
author = {Jesper Jansson and
Chuanqi Shen and
Wing{-}Kin Sung},
title = {Improved Algorithms for Constructing Consensus Trees},
journal = {J. {ACM}},
volume = {63},
number = {3},
pages = {28:1--28:24},
year = {2016},
url = {https://doi.org/10.1145/2925985},
doi = {10.1145/2925985},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jacm/JanssonSS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mfcs/JanssonS16,
author = {Jesper Jansson and
Wing{-}Kin Sung},
editor = {Piotr Faliszewski and
Anca Muscholl and
Rolf Niedermeier},
title = {Minimal Phylogenetic Supertrees and Local Consensus Trees},
booktitle = {41st International Symposium on Mathematical Foundations of Computer
Science, {MFCS} 2016, August 22-26, 2016 - Krak{\'{o}}w, Poland},
series = {LIPIcs},
volume = {58},
pages = {53:1--53:14},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2016},
url = {https://doi.org/10.4230/LIPIcs.MFCS.2016.53},
doi = {10.4230/LIPICS.MFCS.2016.53},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/mfcs/JanssonS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/JanssonS16,
author = {Jesper Jansson and
Wing{-}Kin Sung},
title = {Algorithms for Combining Rooted Triplets into a Galled Phylogenetic
Network},
booktitle = {Encyclopedia of Algorithms},
pages = {48--52},
year = {2016},
url = {https://doi.org/10.1007/978-1-4939-2864-4\_92},
doi = {10.1007/978-1-4939-2864-4\_92},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/algo/JanssonS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/Sung16,
author = {Wing{-}Kin Sung},
title = {Indexed Approximate String Matching},
booktitle = {Encyclopedia of Algorithms},
pages = {964--968},
year = {2016},
url = {https://doi.org/10.1007/978-1-4939-2864-4\_188},
doi = {10.1007/978-1-4939-2864-4\_188},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/algo/Sung16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/JanssonS16a,
author = {Jesper Jansson and
Wing{-}Kin Sung},
title = {Maximum Agreement Supertree},
booktitle = {Encyclopedia of Algorithms},
pages = {1224--1227},
year = {2016},
url = {https://doi.org/10.1007/978-1-4939-2864-4\_222},
doi = {10.1007/978-1-4939-2864-4\_222},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/algo/JanssonS16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonSS15,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Linked Dynamic Tries with Applications to LZ-Compression in Sublinear
Time and Space},
journal = {Algorithmica},
volume = {71},
number = {4},
pages = {969--988},
year = {2015},
url = {https://doi.org/10.1007/s00453-013-9836-6},
doi = {10.1007/S00453-013-9836-6},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonSS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/SungSSBP15,
author = {Wing{-}Kin Sung and
Kunihiko Sadakane and
Tetsuo Shibuya and
Abha Belorkar and
Iana Pyrogova},
title = {An O(m, log m)-Time Algorithm for Detecting Superbubbles},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {4},
pages = {770--777},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2014.2385696},
doi = {10.1109/TCBB.2014.2385696},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/SungSSBP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/JanssonLS15,
author = {Jesper Jansson and
Zhaoxian Li and
Wing{-}Kin Sung},
editor = {Ernst W. Mayr and
Nicolas Ollinger},
title = {On Finding the Adams Consensus Tree},
booktitle = {32nd International Symposium on Theoretical Aspects of Computer Science,
{STACS} 2015, March 4-7, 2015, Garching, Germany},
series = {LIPIcs},
volume = {30},
pages = {487--499},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2015},
url = {https://doi.org/10.4230/LIPIcs.STACS.2015.487},
doi = {10.4230/LIPICS.STACS.2015.487},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/stacs/JanssonLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DoS14,
author = {Huy Hoang Do and
Wing{-}Kin Sung},
title = {CWig: compressed representation of Wiggle/BedGraph format},
journal = {Bioinform.},
volume = {30},
number = {18},
pages = {2543--2550},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btu330},
doi = {10.1093/BIOINFORMATICS/BTU330},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DoS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/EisenhaberSW14,
author = {Frank Eisenhaber and
Wing{-}Kin Sung and
Limsoon Wong},
title = {Guest Editorial for the International Conference on Genome Informatics
{(GIW} 2013)},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {11},
number = {1},
pages = {5--6},
year = {2014},
url = {https://doi.org/10.1109/TCBB.2014.2299751},
doi = {10.1109/TCBB.2014.2299751},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/EisenhaberSW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DoJSS14,
author = {Huy Hoang Do and
Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Fast relative Lempel-Ziv self-index for similar sequences},
journal = {Theor. Comput. Sci.},
volume = {532},
pages = {14--30},
year = {2014},
url = {https://doi.org/10.1016/j.tcs.2013.07.024},
doi = {10.1016/J.TCS.2013.07.024},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/DoJSS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/JanssonSVY14,
author = {Jesper Jansson and
Wing{-}Kin Sung and
Hoa Vu and
Siu{-}Ming Yiu},
editor = {Hee{-}Kap Ahn and
Chan{-}Su Shin},
title = {Faster Algorithms for Computing the R* Consensus Tree},
booktitle = {Algorithms and Computation - 25th International Symposium, {ISAAC}
2014, Jeonju, Korea, December 15-17, 2014, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8889},
pages = {414--425},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-13075-0\_33},
doi = {10.1007/978-3-319-13075-0\_33},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/JanssonSVY14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonS13,
author = {Jesper Jansson and
Wing{-}Kin Sung},
title = {Constructing the R* Consensus Tree of Two Trees in Subcubic Time},
journal = {Algorithmica},
volume = {66},
number = {2},
pages = {329--345},
year = {2013},
url = {https://doi.org/10.1007/s00453-012-9639-1},
doi = {10.1007/S00453-012-9639-1},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/DoS13,
author = {Huy Hoang Do and
Wing{-}Kin Sung},
title = {Compressed Directed Acyclic Word Graph with Application in Local Alignment},
journal = {Algorithmica},
volume = {67},
number = {2},
pages = {125--141},
year = {2013},
url = {https://doi.org/10.1007/s00453-013-9794-z},
doi = {10.1007/S00453-013-9794-Z},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/DoS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/EisenhaberSW13,
author = {Frank Eisenhaber and
Wing{-}Kin Sung and
Limsoon Wong},
title = {International Conference on Genome Informatics {(GIW} 2013) in Singapore:
introduction to the systems biology contributions},
journal = {{BMC} Syst. Biol.},
volume = {7},
number = {{S-6}},
pages = {I1},
year = {2013},
url = {https://doi.org/10.1186/1752-0509-7-S6-I1},
doi = {10.1186/1752-0509-7-S6-I1},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/EisenhaberSW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/EisenhaberSW13,
author = {Frank Eisenhaber and
Wing{-}Kin Sung and
Limsoon Wong},
title = {The 24th International Conference on genome Informatics, Giw2013,
in Singapore},
journal = {J. Bioinform. Comput. Biol.},
volume = {11},
number = {6},
year = {2013},
url = {https://doi.org/10.1142/S0219720013020034},
doi = {10.1142/S0219720013020034},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/EisenhaberSW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangCWCS13,
author = {ZhiZhuo Zhang and
Cheng Wei Chang and
Hugo Willy and
Edwin Cheung and
Wing{-}Kin Sung},
title = {Simultaneously Learning {DNA} Motif Along with Its Position and Sequence
Rank Preferences Through Expectation Maximization Algorithm},
journal = {J. Comput. Biol.},
volume = {20},
number = {3},
pages = {237--248},
year = {2013},
url = {https://doi.org/10.1089/cmb.2012.0233},
doi = {10.1089/CMB.2012.0233},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangCWCS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangLTS13,
author = {ZhiZhuo Zhang and
Guoliang Li and
Kim{-}Chuan Toh and
Wing{-}Kin Sung},
title = {3D Chromosome Modeling with Semi-Definite Programming and Hi-C Data},
journal = {J. Comput. Biol.},
volume = {20},
number = {11},
pages = {831--846},
year = {2013},
url = {https://doi.org/10.1089/cmb.2013.0076},
doi = {10.1089/CMB.2013.0076},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangLTS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VuCHLSSY13,
author = {Hoa Vu and
Francis Y. L. Chin and
Wing{-}Kai Hon and
Henry C. M. Leung and
Kunihiko Sadakane and
Ken Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Reconstructing \emph{k}-Reticulated Phylogenetic Network from a Set
of Gene Trees},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {112--124},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_14},
doi = {10.1007/978-3-642-38036-5\_14},
timestamp = {Thu, 20 Aug 2020 15:56:19 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VuCHLSSY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/JanssonSS13,
author = {Jesper Jansson and
Chuanqi Shen and
Wing{-}Kin Sung},
editor = {Minghua Deng and
Rui Jiang and
Fengzhu Sun and
Xuegong Zhang},
title = {An Optimal Algorithm for Building the Majority Rule Consensus Tree},
booktitle = {Research in Computational Molecular Biology - 17th Annual International
Conference, {RECOMB} 2013, Beijing, China, April 7-10, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7821},
pages = {88--99},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37195-0\_8},
doi = {10.1007/978-3-642-37195-0\_8},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/JanssonSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhangLTS13,
author = {ZhiZhuo Zhang and
Guoliang Li and
Kim{-}Chuan Toh and
Wing{-}Kin Sung},
editor = {Minghua Deng and
Rui Jiang and
Fengzhu Sun and
Xuegong Zhang},
title = {Inference of Spatial Organizations of Chromosomes Using Semi-definite
Embedding Approach and Hi-C Data},
booktitle = {Research in Computational Molecular Biology - 17th Annual International
Conference, {RECOMB} 2013, Beijing, China, April 7-10, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7821},
pages = {317--332},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37195-0\_31},
doi = {10.1007/978-3-642-37195-0\_31},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/ZhangLTS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/JanssonSS13,
author = {Jesper Jansson and
Chuanqi Shen and
Wing{-}Kin Sung},
editor = {Sanjeev Khanna},
title = {Improved Algorithms for Constructing Consensus Trees},
booktitle = {Proceedings of the Twenty-Fourth Annual {ACM-SIAM} Symposium on Discrete
Algorithms, {SODA} 2013, New Orleans, Louisiana, USA, January 6-8,
2013},
pages = {1800--1813},
publisher = {{SIAM}},
year = {2013},
url = {https://doi.org/10.1137/1.9781611973105.129},
doi = {10.1137/1.9781611973105.129},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/soda/JanssonSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/JanssonSS13,
author = {Jesper Jansson and
Chuanqi Shen and
Wing{-}Kin Sung},
editor = {Aaron E. Darling and
Jens Stoye},
title = {Algorithms for the Majority Rule {(+)} Consensus Tree and the Frequency
Difference Consensus Tree},
booktitle = {Algorithms in Bioinformatics - 13th International Workshop, {WABI}
2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8126},
pages = {141--155},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40453-5\_12},
doi = {10.1007/978-3-642-40453-5\_12},
timestamp = {Tue, 21 Mar 2023 21:00:29 +0100},
biburl = {https://dblp.org/rec/conf/wabi/JanssonSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JanssonSS13,
author = {Jesper Jansson and
Chuanqi Shen and
Wing{-}Kin Sung},
title = {Algorithms for the Majority Rule {(+)} Consensus Tree and the Frequency
Difference Consensus Tree},
journal = {CoRR},
volume = {abs/1307.7821},
year = {2013},
url = {http://arxiv.org/abs/1307.7821},
eprinttype = {arXiv},
eprint = {1307.7821},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JanssonSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/shonan-reports/SadakaneS13,
author = {Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Compact Data structures for Big Data {(NII} Shonan Meeting 2013-10)},
journal = {{NII} Shonan Meet. Rep.},
volume = {2013},
year = {2013},
url = {https://shonan.nii.ac.jp/seminars/029/},
timestamp = {Thu, 04 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/shonan-reports/SadakaneS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TennakoonPS12,
author = {Chandana Tennakoon and
Rikky W. Purbojati and
Wing{-}Kin Sung},
title = {BatMis: a fast algorithm for \emph{k}-mismatch mapping},
journal = {Bioinform.},
volume = {28},
number = {16},
pages = {2122--2128},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts339},
doi = {10.1093/BIOINFORMATICS/BTS339},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TennakoonPS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computer/Sung12,
author = {Wing{-}Kin Sung},
title = {Bioinformatics Applications in Genomics},
journal = {Computer},
volume = {45},
number = {6},
pages = {57--63},
year = {2012},
url = {https://doi.org/10.1109/MC.2012.151},
doi = {10.1109/MC.2012.151},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/computer/Sung12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CuiJS12,
author = {Yun Cui and
Jesper Jansson and
Wing{-}Kin Sung},
title = {Polynomial-Time Algorithms for Building a Consensus MUL-Tree},
journal = {J. Comput. Biol.},
volume = {19},
number = {9},
pages = {1073--1088},
year = {2012},
url = {https://doi.org/10.1089/cmb.2012.0008},
doi = {10.1089/CMB.2012.0008},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/CuiJS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/JanssonSS12,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Ultra-succinct representation of ordered trees with applications},
journal = {J. Comput. Syst. Sci.},
volume = {78},
number = {2},
pages = {619--631},
year = {2012},
url = {https://doi.org/10.1016/j.jcss.2011.09.002},
doi = {10.1016/J.JCSS.2011.09.002},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcss/JanssonSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/CzyzowiczDGIJKLMSS12,
author = {Jurek Czyzowicz and
Stefan Dobrev and
Leszek Gasieniec and
David Ilcinkas and
Jesper Jansson and
Ralf Klasing and
Ioannis Lignos and
Russell Martin and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {More efficient periodic traversal in anonymous undirected graphs},
journal = {Theor. Comput. Sci.},
volume = {444},
pages = {60--76},
year = {2012},
url = {https://doi.org/10.1016/j.tcs.2012.01.035},
doi = {10.1016/J.TCS.2012.01.035},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/CzyzowiczDGIJKLMSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaim/DoJSS12,
author = {Huy Hoang Do and
Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Jack Snoeyink and
Pinyan Lu and
Kaile Su and
Lusheng Wang},
title = {Fast Relative Lempel-Ziv Self-index for Similar Sequences},
booktitle = {Frontiers in Algorithmics and Algorithmic Aspects in Information and
Management - Joint International Conference, {FAW-AAIM} 2012, Beijing,
China, May 14-16, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7285},
pages = {291--302},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-29700-7\_27},
doi = {10.1007/978-3-642-29700-7\_27},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aaim/DoJSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/JanssonSS12,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Artur Czumaj and
Kurt Mehlhorn and
Andrew M. Pitts and
Roger Wattenhofer},
title = {{CRAM:} Compressed Random Access Memory},
booktitle = {Automata, Languages, and Programming - 39th International Colloquium,
{ICALP} 2012, Warwick, UK, July 9-13, 2012, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {7391},
pages = {510--521},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-31594-7\_43},
doi = {10.1007/978-3-642-31594-7\_43},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icalp/JanssonSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhangCWCS12,
author = {ZhiZhuo Zhang and
Cheng Wei Chang and
Hugo Willy and
Edwin Cheung and
Wing{-}Kin Sung},
editor = {Benny Chor},
title = {Simultaneously Learning {DNA} Motif along with Its Position and Sequence
Rank Preferences through {EM} Algorithm},
booktitle = {Research in Computational Molecular Biology - 16th Annual International
Conference, {RECOMB} 2012, Barcelona, Spain, April 21-24, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7262},
pages = {355--370},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-29627-7\_37},
doi = {10.1007/978-3-642-29627-7\_37},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZhangCWCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/HoangS11,
author = {Viet Tung Hoang and
Wing{-}Kin Sung},
title = {Improved Algorithms for Maximum Agreement and~Compatible Supertrees},
journal = {Algorithmica},
volume = {59},
number = {2},
pages = {195--214},
year = {2011},
url = {https://doi.org/10.1007/s00453-009-9303-6},
doi = {10.1007/S00453-009-9303-6},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/HoangS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AriyaratneS11,
author = {Pramila Nuwantha Ariyaratne and
Wing{-}Kin Sung},
title = {PE-Assembler: \emph{de novo} assembler using short paired-end reads},
journal = {Bioinform.},
volume = {27},
number = {2},
pages = {167--174},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btq626},
doi = {10.1093/BIOINFORMATICS/BTQ626},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AriyaratneS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/WongLSCY11,
author = {Thomas K. F. Wong and
Tak Wah Lam and
Wing{-}Kin Sung and
Brenda W. Y. Cheung and
Siu{-}Ming Yiu},
title = {Structural Alignment of {RNA} with Complex Pseudoknot Structure},
journal = {J. Comput. Biol.},
volume = {18},
number = {1},
pages = {97--108},
year = {2011},
url = {https://doi.org/10.1089/cmb.2009.0275},
doi = {10.1089/CMB.2009.0275},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/WongLSCY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/GaoSN11,
author = {Song Gao and
Wing{-}Kin Sung and
Niranjan Nagarajan},
title = {Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput
Paired-End Sequences},
journal = {J. Comput. Biol.},
volume = {18},
number = {11},
pages = {1681--1691},
year = {2011},
url = {https://doi.org/10.1089/cmb.2011.0170},
doi = {10.1089/CMB.2011.0170},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/GaoSN11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/ChanLSTW11,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Swee{-}Seong Wong},
title = {A linear size index for approximate pattern matching},
journal = {J. Discrete Algorithms},
volume = {9},
number = {4},
pages = {358--364},
year = {2011},
url = {https://doi.org/10.1016/j.jda.2011.04.004},
doi = {10.1016/J.JDA.2011.04.004},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jda/ChanLSTW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangCGSC11,
author = {ZhiZhuo Zhang and
Cheng Wei Chang and
Wan Ling Goh and
Wing{-}Kin Sung and
Edwin Cheung},
title = {{CENTDIST:} discovery of co-associated factors by motif distribution},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Web-Server-Issue},
pages = {391--399},
year = {2011},
url = {https://doi.org/10.1093/nar/gkr387},
doi = {10.1093/NAR/GKR387},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhangCGSC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/talg/MoranSS11,
author = {Shlomo Moran and
Sagi Snir and
Wing{-}Kin Sung},
title = {Partial convex recolorings of trees and galled networks: Tight upper
and lower bounds},
journal = {{ACM} Trans. Algorithms},
volume = {7},
number = {4},
pages = {42:1--42:20},
year = {2011},
url = {https://doi.org/10.1145/2000807.2000810},
doi = {10.1145/2000807.2000810},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/talg/MoranSS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/GuillemotJS11,
author = {Sylvain Guillemot and
Jesper Jansson and
Wing{-}Kin Sung},
title = {Computing a Smallest Multilabeled Phylogenetic Tree from Rooted Triplets},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {4},
pages = {1141--1147},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2010.77},
doi = {10.1109/TCBB.2010.77},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/GuillemotJS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/HonSS11,
author = {Wing{-}Kai Hon and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Succinct data structures for Searchable Partial Sums with optimal
worst-case performance},
journal = {Theor. Comput. Sci.},
volume = {412},
number = {39},
pages = {5176--5186},
year = {2011},
url = {https://doi.org/10.1016/j.tcs.2011.05.023},
doi = {10.1016/J.TCS.2011.05.023},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/HonSS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/DoS11,
author = {Huy Hoang Do and
Wing{-}Kin Sung},
editor = {Bin Fu and
Ding{-}Zhu Du},
title = {Compressed Directed Acyclic Word Graph with Application in Local Alignment},
booktitle = {Computing and Combinatorics - 17th Annual International Conference,
{COCOON} 2011, Dallas, TX, USA, August 14-16, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6842},
pages = {503--518},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22685-4\_44},
doi = {10.1007/978-3-642-22685-4\_44},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cocoon/DoS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iri/MalpaniLZS11,
author = {Rakhi Malpani and
Meiliu Lu and
Du Zhang and
Wing{-}Kin Sung},
title = {Mining transcriptional association rules from breast cancer profile
data},
booktitle = {Proceedings of the {IEEE} International Conference on Information
Reuse and Integration, {IRI} 2011, 3-5 August 2011, Las Vegas, Nevada,
{USA}},
pages = {154--159},
publisher = {{IEEE} Systems, Man, and Cybernetics Society},
year = {2011},
url = {https://doi.org/10.1109/IRI.2011.6009538},
doi = {10.1109/IRI.2011.6009538},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iri/MalpaniLZS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/CuiJS11,
author = {Yun Cui and
Jesper Jansson and
Wing{-}Kin Sung},
editor = {Takao Asano and
Shin{-}Ichi Nakano and
Yoshio Okamoto and
Osamu Watanabe},
title = {Algorithms for Building Consensus MUL-trees},
booktitle = {Algorithms and Computation - 22nd International Symposium, {ISAAC}
2011, Yokohama, Japan, December 5-8, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7074},
pages = {744--753},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-25591-5\_76},
doi = {10.1007/978-3-642-25591-5\_76},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/CuiJS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/GaoNS11,
author = {Song Gao and
Niranjan Nagarajan and
Wing{-}Kin Sung},
editor = {Vineet Bafna and
S{\"{u}}leyman Cenk Sahinalp},
title = {Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput
Paired-End Sequences},
booktitle = {Research in Computational Molecular Biology - 15th Annual International
Conference, {RECOMB} 2011, Vancouver, BC, Canada, March 28-31, 2011.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6577},
pages = {437--451},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-20036-6\_40},
doi = {10.1007/978-3-642-20036-6\_40},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/GaoNS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/ChanLSTW10,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Swee{-}Seong Wong},
title = {Compressed Indexes for Approximate String Matching},
journal = {Algorithmica},
volume = {58},
number = {2},
pages = {263--281},
year = {2010},
url = {https://doi.org/10.1007/s00453-008-9263-2},
doi = {10.1007/S00453-008-9263-2},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/ChanLSTW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WillySANS10,
author = {Hugo Willy and
Fushan Song and
Zeyar Aung and
See{-}Kiong Ng and
Wing{-}Kin Sung},
title = {SLiM on Diet: finding short linear motifs on domain interaction interfaces
in Protein Data Bank},
journal = {Bioinform.},
volume = {26},
number = {8},
pages = {1036--1042},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq065},
doi = {10.1093/BIOINFORMATICS/BTQ065},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WillySANS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NarangMS10,
author = {Vipin Narang and
Ankush Mittal and
Wing{-}Kin Sung},
title = {Localized motif discovery in gene regulatory sequences},
journal = {Bioinform.},
volume = {26},
number = {9},
pages = {1152--1159},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq106},
doi = {10.1093/BIOINFORMATICS/BTQ106},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NarangMS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuHWYSWLS10,
author = {Han Xu and
Lusy Handoko and
Xueliang Wei and
Chaopeng Ye and
Jianpeng Sheng and
Chia{-}Lin Wei and
Feng Lin and
Wing{-}Kin Sung},
title = {A signal-noise model for significance analysis of ChIP-seq with negative
control},
journal = {Bioinform.},
volume = {26},
number = {9},
pages = {1199--1204},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq128},
doi = {10.1093/BIOINFORMATICS/BTQ128},
timestamp = {Thu, 18 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuHWYSWLS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaim/HuangLSTY10,
author = {Songbo Huang and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Siu{-}Ming Yiu},
editor = {Bo Chen},
title = {Indexing Similar {DNA} Sequences},
booktitle = {Algorithmic Aspects in Information and Management, 6th International
Conference, {AAIM} 2010, Weihai, China, July 19-21, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6124},
pages = {180--190},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-14355-7\_19},
doi = {10.1007/978-3-642-14355-7\_19},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aaim/HuangLSTY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/JanssonS10,
author = {Jesper Jansson and
Wing{-}Kin Sung},
editor = {Mark de Berg and
Ulrich Meyer},
title = {Constructing the R* Consensus Tree of Two Trees in Subcubic Time},
booktitle = {Algorithms - {ESA} 2010, 18th Annual European Symposium, Liverpool,
UK, September 6-8, 2010. Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {6346},
pages = {573--584},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15775-2\_49},
doi = {10.1007/978-3-642-15775-2\_49},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/esa/JanssonS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1011-1708,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Compressed random access memory},
journal = {CoRR},
volume = {abs/1011.1708},
year = {2010},
url = {http://arxiv.org/abs/1011.1708},
eprinttype = {arXiv},
eprint = {1011.1708},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1011-1708.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/LeungSYCS09,
author = {Henry Chi{-}Ming Leung and
Man{-}Hung Siu and
Siu{-}Ming Yiu and
Francis Yuk{-}Lun Chin and
Ken Wing{-}Kin Sung},
title = {Clustering-Based Approach for Predicting Motif Pairs from protein
Interaction Data},
journal = {J. Bioinform. Comput. Biol.},
volume = {7},
number = {4},
pages = {701--716},
year = {2009},
url = {https://doi.org/10.1142/S0219720009004266},
doi = {10.1142/S0219720009004266},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/LeungSYCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/EisenhaberKNSW09,
author = {Frank Eisenhaber and
Chee Keong Kwoh and
See{-}Kiong Ng and
Wing{-}Kin Sung and
Limsoon Wong},
title = {Brief Overview of Bioinformatics Activities in Singapore},
journal = {PLoS Comput. Biol.},
volume = {5},
number = {9},
year = {2009},
url = {https://doi.org/10.1371/journal.pcbi.1000508},
doi = {10.1371/JOURNAL.PCBI.1000508},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/EisenhaberKNSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/HonSS09,
author = {Wing{-}Kai Hon and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Breaking a Time-and-Space Barrier in Constructing Full-Text Indices},
journal = {{SIAM} J. Comput.},
volume = {38},
number = {6},
pages = {2162--2178},
year = {2009},
url = {https://doi.org/10.1137/070685373},
doi = {10.1137/070685373},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamcomp/HonSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bicob/WongYLS09,
author = {Thomas K. F. Wong and
Siu{-}Ming Yiu and
Tak Wah Lam and
Wing{-}Kin Sung},
editor = {Sanguthevar Rajasekaran},
title = {The 2-Interval Pattern Matching Problems and Its Application to ncRNA
Scanning},
booktitle = {Bioinformatics and Computational Biology, First International Conference,
BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5462},
pages = {79--89},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-00727-9\_10},
doi = {10.1007/978-3-642-00727-9\_10},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bicob/WongYLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/GuillemotJS09,
author = {Sylvain Guillemot and
Jesper Jansson and
Wing{-}Kin Sung},
editor = {Yingfei Dong and
Ding{-}Zhu Du and
Oscar H. Ibarra},
title = {Computing a Smallest Multi-labeled Phylogenetic Tree from Rooted Triplets},
booktitle = {Algorithms and Computation, 20th International Symposium, {ISAAC}
2009, Honolulu, Hawaii, USA, December 16-18, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5878},
pages = {1205--1214},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-10631-6\_121},
doi = {10.1007/978-3-642-10631-6\_121},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/GuillemotJS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sirocco/CzyzowiczDGIJKLMSS09,
author = {Jurek Czyzowicz and
Stefan Dobrev and
Leszek Gasieniec and
David Ilcinkas and
Jesper Jansson and
Ralf Klasing and
Ioannis Lignos and
Russell A. Martin and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Shay Kutten and
Janez Zerovnik},
title = {More Efficient Periodic Traversal in Anonymous Undirected Graphs},
booktitle = {Structural Information and Communication Complexity, 16th International
Colloquium, {SIROCCO} 2009, Piran, Slovenia, May 25-27, 2009, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {5869},
pages = {167--181},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-11476-2\_14},
doi = {10.1007/978-3-642-11476-2\_14},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sirocco/CzyzowiczDGIJKLMSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/WongLSY09,
author = {Thomas K. F. Wong and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Steven Salzberg and
Tandy J. Warnow},
title = {Structural Alignment of {RNA} with Complex Pseudoknot Structure},
booktitle = {Algorithms in Bioinformatics, 9th International Workshop, {WABI} 2009,
Philadelphia, PA, USA, September 12-13, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5724},
pages = {403--414},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04241-6\_33},
doi = {10.1007/978-3-642-04241-6\_33},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/WongLSY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0905-1737,
author = {Jurek Czyzowicz and
Stefan Dobrev and
Leszek Gasieniec and
David Ilcinkas and
Jesper Jansson and
Ralf Klasing and
Yannis Lignos and
Russell A. Martin and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {More efficient periodic traversal in anonymous undirected graphs},
journal = {CoRR},
volume = {abs/0905.1737},
year = {2009},
url = {http://arxiv.org/abs/0905.1737},
eprinttype = {arXiv},
eprint = {0905.1737},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0905-1737.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/LamSW08,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Swee{-}Seong Wong},
title = {Improved Approximate String Matching Using Compressed Suffix Data
Structures},
journal = {Algorithmica},
volume = {51},
number = {3},
pages = {298--314},
year = {2008},
url = {https://doi.org/10.1007/s00453-007-9104-8},
doi = {10.1007/S00453-007-9104-8},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/LamSW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LamSTWY08,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Chi{-}Kwong Wong and
Siu{-}Ming Yiu},
title = {Compressed indexing and local alignment of {DNA}},
journal = {Bioinform.},
volume = {24},
number = {6},
pages = {791--797},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn032},
doi = {10.1093/BIOINFORMATICS/BTN032},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LamSTWY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WijayaYSRS08,
author = {Edward Wijaya and
Siu{-}Ming Yiu and
Ngo Thanh Son and
Kanagasabai Rajaraman and
Wing{-}Kin Sung},
title = {MotifVoter: a novel ensemble method for fine-grained integration of
generic motif finders},
journal = {Bioinform.},
volume = {24},
number = {20},
pages = {2288--2295},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn420},
doi = {10.1093/BIOINFORMATICS/BTN420},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WijayaYSRS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuWLS08,
author = {Han Xu and
Chia{-}Lin Wei and
Feng Lin and
Wing{-}Kin Sung},
title = {An {HMM} approach to genome-wide identification of differential histone
modification sites from ChIP-seq data},
journal = {Bioinform.},
volume = {24},
number = {20},
pages = {2344--2349},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn402},
doi = {10.1093/BIOINFORMATICS/BTN402},
timestamp = {Thu, 18 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuWLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeWLMS08,
author = {Wah{-}Heng Lee and
Christopher W. Wong and
Wan Yee Leong and
Lance D. Miller and
Wing{-}Kin Sung},
title = {{LOMA:} {A} fast method to generate efficient tagged-random primers
despite amplification bias of random {PCR} on pathogens},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-368},
doi = {10.1186/1471-2105-9-368},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeWLMS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/ChuaNSLW08,
author = {Hon Nian Chua and
Kang Ning and
Wing{-}Kin Sung and
Hon Wai Leong and
Limsoon Wong},
title = {Using Indirect protein-protein Interactions for protein Complex Prediction},
journal = {J. Bioinform. Comput. Biol.},
volume = {6},
number = {3},
pages = {435--466},
year = {2008},
url = {https://doi.org/10.1142/S0219720008003497},
doi = {10.1142/S0219720008003497},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/ChuaNSLW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DoCPSZ08,
author = {Huy Hoang Do and
Kwok Pui Choi and
Franco P. Preparata and
Wing{-}Kin Sung and
Louxin Zhang},
title = {Spectrum-Based \emph{De Novo} Repeat Detection in Genomic Sequences},
journal = {J. Comput. Biol.},
volume = {15},
number = {5},
pages = {469--488},
year = {2008},
url = {https://doi.org/10.1089/cmb.2008.0013},
doi = {10.1089/CMB.2008.0013},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/DoCPSZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LeeS08,
author = {Wah{-}Heng Lee and
Wing{-}Kin Sung},
title = {RB-Finder: An Improved Distance-Based Sliding Window Method to Detect
Recombination Breakpoints},
journal = {J. Comput. Biol.},
volume = {15},
number = {7},
pages = {881--898},
year = {2008},
url = {https://doi.org/10.1089/cmb.2007.0154},
doi = {10.1089/CMB.2007.0154},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/LeeS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mics/ChanLSWY08,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Prudence W. H. Wong and
Siu{-}Ming Yiu},
title = {Non-overlapping Common Substrings Allowing Mutations},
journal = {Math. Comput. Sci.},
volume = {1},
number = {4},
pages = {543--555},
year = {2008},
url = {https://doi.org/10.1007/s11786-007-0030-6},
doi = {10.1007/S11786-007-0030-6},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mics/ChanLSWY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/VegaRS08,
author = {Vinsensius B. Vega and
Yijun Ruan and
Wing{-}Kin Sung},
editor = {Marian Bubak and
G. Dick van Albada and
Jack J. Dongarra and
Peter M. A. Sloot},
title = {A Streamlined and Generalized Analysis of Chromatin ImmunoPrecipitation
Paired-End diTag Data},
booktitle = {Computational Science - {ICCS} 2008, 8th International Conference,
Krak{\'{o}}w, Poland, June 23-25, 2008, Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {5103},
pages = {130--139},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-69389-5\_16},
doi = {10.1007/978-3-540-69389-5\_16},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccS/VegaRS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/HoangS08,
author = {Viet Tung Hoang and
Wing{-}Kin Sung},
editor = {Susanne Albers and
Pascal Weil},
title = {Fixed Parameter Polynomial Time Algorithms for Maximum Agreement and
Compatible Supertrees},
booktitle = {{STACS} 2008, 25th Annual Symposium on Theoretical Aspects of Computer
Science, Bordeaux, France, February 21-23, 2008, Proceedings},
series = {LIPIcs},
volume = {1},
pages = {361--372},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik, Germany},
year = {2008},
url = {https://doi.org/10.4230/LIPIcs.STACS.2008.1357},
doi = {10.4230/LIPICS.STACS.2008.1357},
timestamp = {Tue, 22 Jun 2021 15:44:08 +0200},
biburl = {https://dblp.org/rec/conf/stacs/HoangS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/Sung08,
author = {Wing{-}Kin Sung},
editor = {Ming{-}Yang Kao},
title = {Constructing a Galled Phylogenetic Network},
booktitle = {Encyclopedia of Algorithms - 2008 Edition},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-0-387-30162-4\_92},
doi = {10.1007/978-0-387-30162-4\_92},
timestamp = {Thu, 27 Jun 2019 16:25:31 +0200},
biburl = {https://dblp.org/rec/reference/algo/Sung08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/Sung08a,
author = {Wing{-}Kin Sung},
editor = {Ming{-}Yang Kao},
title = {Indexed Approximate String Matching},
booktitle = {Encyclopedia of Algorithms - 2008 Edition},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-0-387-30162-4\_188},
doi = {10.1007/978-0-387-30162-4\_188},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/algo/Sung08a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/Sung08b,
author = {Wing{-}Kin Sung},
editor = {Ming{-}Yang Kao},
title = {Maximum Agreement Supertree},
booktitle = {Encyclopedia of Algorithms - 2008 Edition},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-0-387-30162-4\_222},
doi = {10.1007/978-0-387-30162-4\_222},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/algo/Sung08b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0802-2867,
author = {Viet Tung Hoang and
Wing{-}Kin Sung},
title = {Fixed Parameter Polynomial Time Algorithms for Maximum Agreement and
Compatible Supertrees},
journal = {CoRR},
volume = {abs/0802.2867},
year = {2008},
url = {http://arxiv.org/abs/0802.2867},
eprinttype = {arXiv},
eprint = {0802.2867},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0802-2867.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/HonLSSY07,
author = {Wing{-}Kai Hon and
Tak Wah Lam and
Kunihiko Sadakane and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {A Space and Time Efficient Algorithm for Constructing Compressed Suffix
Arrays},
journal = {Algorithmica},
volume = {48},
number = {1},
pages = {23--36},
year = {2007},
url = {https://doi.org/10.1007/s00453-006-1228-8},
doi = {10.1007/S00453-006-1228-8},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/algorithmica/HonLSSY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WijayaRYS07,
author = {Edward Wijaya and
Kanagasabai Rajaraman and
Siu{-}Ming Yiu and
Wing{-}Kin Sung},
title = {Detection of generic spaced motifs using submotif pattern mining},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1476--1485},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm118},
doi = {10.1093/BIOINFORMATICS/BTM118},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WijayaRYS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChuaSW07,
author = {Hon Nian Chua and
Wing{-}Kin Sung and
Limsoon Wong},
title = {An efficient strategy for extensive integration of diverse biological
data for protein function prediction},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3364--3373},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm520},
doi = {10.1093/BIOINFORMATICS/BTM520},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChuaSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChuaSW07,
author = {Hon Nian Chua and
Wing{-}Kin Sung and
Limsoon Wong},
title = {Using indirect protein interactions for the prediction of Gene Ontology
functions},
journal = {{BMC} Bioinform.},
volume = {8},
number = {{S-4}},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-S4-S8},
doi = {10.1186/1471-2105-8-S4-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChuaSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/HanSF07,
author = {Xu Han and
Wing{-}Kin Sung and
Lin Feng},
title = {Identifying differentially expressed genes in Time-Course microarray
Experiment without Replicate},
journal = {J. Bioinform. Comput. Biol.},
volume = {5},
number = {2a},
pages = {281--296},
year = {2007},
url = {https://doi.org/10.1142/S0219720007002655},
doi = {10.1142/S0219720007002655},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/HanSF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/NguyenNS07,
author = {Nguyen Bao Nguyen and
C. Thach Nguyen and
Wing{-}Kin Sung},
title = {Fast algorithms for computing the tripartition-based distance between
phylogenetic networks},
journal = {J. Comb. Optim.},
volume = {13},
number = {3},
pages = {223--242},
year = {2007},
url = {https://doi.org/10.1007/s10878-006-9025-5},
doi = {10.1007/S10878-006-9025-5},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jco/NguyenNS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/NguyenNSZ07,
author = {C. Thach Nguyen and
Nguyen Bao Nguyen and
Wing{-}Kin Sung and
Louxin Zhang},
title = {Reconstructing Recombination Network from Sequence Data: The Small
Parsimony Problem},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {4},
number = {3},
pages = {394--402},
year = {2007},
url = {https://doi.org/10.1109/tcbb.2007.1018},
doi = {10.1109/TCBB.2007.1018},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/NguyenNSZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoa/LamSTWY07,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Chi{-}Kwong Wong and
Siu{-}Ming Yiu},
editor = {Andreas W. M. Dress and
Yinfeng Xu and
Binhai Zhu},
title = {An Experimental Study of Compressed Indexing and Local Alignments
of {DNA}},
booktitle = {Combinatorial Optimization and Applications, First International Conference,
{COCOA} 2007, Xi'an, China, August 14-16, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4616},
pages = {242--254},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73556-4\_27},
doi = {10.1007/978-3-540-73556-4\_27},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/cocoa/LamSTWY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fsttcs/JanssonSS07,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Vikraman Arvind and
Sanjiva Prasad},
title = {Compressed Dynamic Tries with Applications to LZ-Compression in Sublinear
Time and Space},
booktitle = {{FSTTCS} 2007: Foundations of Software Technology and Theoretical
Computer Science, 27th International Conference, New Delhi, India,
December 12-14, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4855},
pages = {424--435},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-77050-3\_35},
doi = {10.1007/978-3-540-77050-3\_35},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/fsttcs/JanssonSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/WongSW07,
author = {Swee{-}Seong Wong and
Wing{-}Kin Sung and
Limsoon Wong},
editor = {Rada Chirkova and
Asuman Dogac and
M. Tamer {\"{O}}zsu and
Timos K. Sellis},
title = {CPS-tree: {A} Compact Partitioned Suffix Tree for Disk-based Indexing
on Large Genome Sequences},
booktitle = {Proceedings of the 23rd International Conference on Data Engineering,
{ICDE} 2007, The Marmara Hotel, Istanbul, Turkey, April 15-20, 2007},
pages = {1350--1354},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/ICDE.2007.369009},
doi = {10.1109/ICDE.2007.369009},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/WongSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/LamSTY07,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Siu{-}Ming Yiu},
editor = {Takeshi Tokuyama},
title = {Space Efficient Indexes for String Matching with Don't Cares},
booktitle = {Algorithms and Computation, 18th International Symposium, {ISAAC}
2007, Sendai, Japan, December 17-19, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4835},
pages = {846--857},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-77120-3\_73},
doi = {10.1007/978-3-540-77120-3\_73},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/LamSTY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LeeS07,
author = {Wah{-}Heng Lee and
Wing{-}Kin Sung},
editor = {Terence P. Speed and
Haiyan Huang},
title = {RB-Finder: An Improved Distance-Based Sliding Window Method to Detect
Recombination Breakpoints},
booktitle = {Research in Computational Molecular Biology, 11th Annual International
Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4453},
pages = {518--532},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-71681-5\_36},
doi = {10.1007/978-3-540-71681-5\_36},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LeeS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/JanssonSS07,
author = {Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Nikhil Bansal and
Kirk Pruhs and
Clifford Stein},
title = {Ultra-succinct representation of ordered trees},
booktitle = {Proceedings of the Eighteenth Annual {ACM-SIAM} Symposium on Discrete
Algorithms, {SODA} 2007, New Orleans, Louisiana, USA, January 7-9,
2007},
pages = {575--584},
publisher = {{SIAM}},
year = {2007},
url = {http://dl.acm.org/citation.cfm?id=1283383.1283445},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/soda/JanssonSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/ChinLSY07,
author = {Francis Y. L. Chin and
Henry C. M. Leung and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Raffaele Giancarlo and
Sridhar Hannenhalli},
title = {The Point Placement Problem on a Line - Improved Bounds for Pairwise
Distance Queries},
booktitle = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4645},
pages = {372--382},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-74126-8\_35},
doi = {10.1007/978-3-540-74126-8\_35},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/ChinLSY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonNSW06,
author = {Jesper Jansson and
See{-}Kiong Ng and
Wing{-}Kin Sung and
Hugo Willy},
title = {A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations
of {RNA} Sequences through Alignment},
journal = {Algorithmica},
volume = {46},
number = {2},
pages = {223--245},
year = {2006},
url = {https://doi.org/10.1007/s00453-006-1207-0},
doi = {10.1007/S00453-006-1207-0},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonNSW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChuaSW06,
author = {Hon Nian Chua and
Wing{-}Kin Sung and
Limsoon Wong},
title = {Exploiting indirect neighbours and topological weight to predict protein
function from protein-protein interactions},
journal = {Bioinform.},
volume = {22},
number = {13},
pages = {1623--1630},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl145},
doi = {10.1093/BIOINFORMATICS/BTL145},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChuaSW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChiuWCAOWSR06,
author = {Kuo Ping Chiu and
Chee{-}Hong Wong and
Qiongyu Chen and
Pramila Ariyaratne and
Hong Sain Ooi and
Chia{-}Lin Wei and
Wing{-}Kin Sung and
Yijun Ruan},
title = {PET-Tool: a software suite for comprehensive processing and managing
of Paired-End diTag {(PET)} sequence data},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {390},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-390},
doi = {10.1186/1471-2105-7-390},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChiuWCAOWSR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TanWSN06,
author = {Soon{-}Heng Tan and
Hugo Willy and
Wing{-}Kin Sung and
See{-}Kiong Ng},
title = {A correlated motif approach for finding short linear motifs from protein
interaction networks},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {502},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-502},
doi = {10.1186/1471-2105-7-502},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TanWSN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/ChinnasamyMS06,
author = {Arunkumar Chinnasamy and
Ankush Mittal and
Wing{-}Kin Sung},
title = {Probabilistic prediction of protein-protein interactions from the
protein sequences},
journal = {Comput. Biol. Medicine},
volume = {36},
number = {10},
pages = {1143--1154},
year = {2006},
url = {https://doi.org/10.1016/j.compbiomed.2005.09.005},
doi = {10.1016/J.COMPBIOMED.2005.09.005},
timestamp = {Wed, 02 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/ChinnasamyMS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eswa/LiuSM06,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Ankush Mittal},
title = {Model gene network by semi-fixed Bayesian network},
journal = {Expert Syst. Appl.},
volume = {30},
number = {1},
pages = {42--49},
year = {2006},
url = {https://doi.org/10.1016/j.eswa.2005.09.044},
doi = {10.1016/J.ESWA.2005.09.044},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eswa/LiuSM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijait/LiuSM06,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Ankush Mittal},
title = {Learning Gene Network Using Time-delayed Bayesian Network},
journal = {Int. J. Artif. Intell. Tools},
volume = {15},
number = {3},
pages = {353--370},
year = {2006},
url = {https://doi.org/10.1142/S0218213006002710},
doi = {10.1142/S0218213006002710},
timestamp = {Tue, 12 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijait/LiuSM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/HeHJS06,
author = {Ying{-}Jun He and
Trinh N. D. Huynh and
Jesper Jansson and
Wing{-}Kin Sung},
title = {Inferring Phylogenetic Relationships Avoiding Forbidden Rooted Triplets},
journal = {J. Bioinform. Comput. Biol.},
volume = {4},
number = {1},
pages = {59--74},
year = {2006},
url = {https://doi.org/10.1142/S0219720006001709},
doi = {10.1142/S0219720006001709},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/HeHJS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/JanssonHS06,
author = {Jesper Jansson and
Ngo Trung Hieu and
Wing{-}Kin Sung},
title = {Local Gapped Subforest Alignment and Its Application in Finding {RNA}
Structural Motifs},
journal = {J. Comput. Biol.},
volume = {13},
number = {3},
pages = {702--718},
year = {2006},
url = {https://doi.org/10.1089/cmb.2006.13.702},
doi = {10.1089/CMB.2006.13.702},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/JanssonHS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/JanssonNS06,
author = {Jesper Jansson and
Nguyen Bao Nguyen and
Wing{-}Kin Sung},
title = {Algorithms for Combining Rooted Triplets into a Galled Phylogenetic
Network},
journal = {{SIAM} J. Comput.},
volume = {35},
number = {5},
pages = {1098--1121},
year = {2006},
url = {https://doi.org/10.1137/S0097539704446529},
doi = {10.1137/S0097539704446529},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/JanssonNS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/HuynhHLS06,
author = {Trinh N. D. Huynh and
Wing{-}Kai Hon and
Tak Wah Lam and
Wing{-}Kin Sung},
title = {Approximate string matching using compressed suffix arrays},
journal = {Theor. Comput. Sci.},
volume = {352},
number = {1-3},
pages = {240--249},
year = {2006},
url = {https://doi.org/10.1016/j.tcs.2005.11.022},
doi = {10.1016/J.TCS.2005.11.022},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/HuynhHLS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/JanssonS06,
author = {Jesper Jansson and
Wing{-}Kin Sung},
title = {Inferring a level-1 phylogenetic network from a dense set of rooted
triplets},
journal = {Theor. Comput. Sci.},
volume = {363},
number = {1},
pages = {60--68},
year = {2006},
url = {https://doi.org/10.1016/j.tcs.2006.06.022},
doi = {10.1016/J.TCS.2006.06.022},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/JanssonS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/ChanLSTW06,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Swee{-}Seong Wong},
editor = {Moshe Lewenstein and
Gabriel Valiente},
title = {A Linear Size Index for Approximate Pattern Matching},
booktitle = {Combinatorial Pattern Matching, 17th Annual Symposium, {CPM} 2006,
Barcelona, Spain, July 5-7, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4009},
pages = {49--59},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11780441\_6},
doi = {10.1007/11780441\_6},
timestamp = {Tue, 14 May 2019 10:00:38 +0200},
biburl = {https://dblp.org/rec/conf/cpm/ChanLSTW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dmin/MurthyWSM06,
author = {Karuturi R. Krishna Murthy and
Silvia Wong and
Wing{-}Kin Sung and
Lance D. Miller},
editor = {Sven F. Crone and
Stefan Lessmann and
Robert Stahlbock},
title = {Differential Friendly Neighbors Algorithm for Differential Relationships
Based Gene Selection and Classification using Microarray Data},
booktitle = {Proceedings of the 2006 International Conference on Data Mining, {DMIN}
2006, Las Vegas, Nevada, USA, June 26-29, 2006},
pages = {175--181},
publisher = {{CSREA} Press},
year = {2006},
timestamp = {Tue, 19 Dec 2006 08:59:49 +0100},
biburl = {https://dblp.org/rec/conf/dmin/MurthyWSM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/ChanLSTW06,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Lung Tam and
Swee{-}Seong Wong},
editor = {Yossi Azar and
Thomas Erlebach},
title = {Compressed Indexes for Approximate String Matching},
booktitle = {Algorithms - {ESA} 2006, 14th Annual European Symposium, Zurich, Switzerland,
September 11-13, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4168},
pages = {208--219},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11841036\_21},
doi = {10.1007/11841036\_21},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esa/ChanLSTW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictai/NarangSM06,
author = {Vipin Narang and
Wing{-}Kin Sung and
Ankush Mittal},
title = {LocalMotif - An In-Silico Tool for Detecting Localized Motifs in Regulatory
Sequences},
booktitle = {18th {IEEE} International Conference on Tools with Artificial Intelligence
{(ICTAI} 2006), 13-15 November 2006, Arlington, VA, {USA}},
pages = {791--799},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/ICTAI.2006.76},
doi = {10.1109/ICTAI.2006.76},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ictai/NarangSM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictai/LiuS06,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung},
title = {Learning Gene Network Using Conditional Dependence},
booktitle = {18th {IEEE} International Conference on Tools with Artificial Intelligence
{(ICTAI} 2006), 13-15 November 2006, Arlington, VA, {USA}},
pages = {800--804},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/ICTAI.2006.74},
doi = {10.1109/ICTAI.2006.74},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ictai/LiuS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/ChuaSW06,
author = {Hon Nian Chua and
Wing{-}Kin Sung and
Limsoon Wong},
editor = {Jinyan Li and
Qiang Yang and
Ah{-}Hwee Tan},
title = {Exploiting Indirect Neighbours and Topological Weight to Predict Protein
Function from Protein-Protein Interactions},
booktitle = {Data Mining for Biomedical Applications, {PAKDD} 2006 Workshop, BioDM
2006, Singapore, April 9, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3916},
pages = {1},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11691730\_1},
doi = {10.1007/11691730\_1},
timestamp = {Wed, 07 Apr 2021 15:15:53 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/ChuaSW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/JanssonNSS05,
author = {Jesper Jansson and
Joseph H.{-}K. Ng and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Rooted Maximum Agreement Supertrees},
journal = {Algorithmica},
volume = {43},
number = {4},
pages = {293--307},
year = {2005},
url = {https://doi.org/10.1007/s00453-004-1147-5},
doi = {10.1007/S00453-004-1147-5},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/JanssonNSS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/artmed/NarangSM05,
author = {Vipin Narang and
Wing{-}Kin Sung and
Ankush Mittal},
title = {Computational modeling of oligonucleotide positional densities for
human promoter prediction},
journal = {Artif. Intell. Medicine},
volume = {35},
number = {1-2},
pages = {107--119},
year = {2005},
url = {https://doi.org/10.1016/j.artmed.2005.02.005},
doi = {10.1016/J.ARTMED.2005.02.005},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/artmed/NarangSM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChanLSWYF05,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Prudence W. H. Wong and
Siu{-}Ming Yiu and
X. Fan},
title = {The mutated subsequence problem and locating conserved genes},
journal = {Bioinform.},
volume = {21},
number = {10},
pages = {2271--2278},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti371},
doi = {10.1093/BIOINFORMATICS/BTI371},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChanLSWYF05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangSKL05,
author = {Jiren Wang and
Wing{-}Kin Sung and
Arun Krishnan and
Kuo{-}Bin Li},
title = {Protein subcellular localization prediction for Gram-negative bacteria
using amino acid subalphabets and a combination of multiple support
vector machines},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {174},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-174},
doi = {10.1186/1471-2105-6-174},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangSKL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/LeongPSW05,
author = {Hon Wai Leong and
Franco P. Preparata and
Wing{-}Kin Sung and
Hugo Willy},
title = {Adaptive Control of Hybridization Noise in Dna Sequencing-by-hybridization},
journal = {J. Bioinform. Comput. Biol.},
volume = {3},
number = {1},
pages = {79--98},
year = {2005},
url = {https://doi.org/10.1142/S0219720005000862},
doi = {10.1142/S0219720005000862},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/LeongPSW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/ChinnasamySM05,
author = {Arunkumar Chinnasamy and
Wing{-}Kin Sung and
Ankush Mittal},
title = {Protein Structure and Fold Prediction Using Tree-augmented Na{\"{\i}}ve
Bayesian Classifier},
journal = {J. Bioinform. Comput. Biol.},
volume = {3},
number = {4},
pages = {803--820},
year = {2005},
url = {https://doi.org/10.1142/S0219720005001302},
doi = {10.1142/S0219720005001302},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/ChinnasamySM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/LiuSLLMM05,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Yi Li and
Jianjun Liu and
Ankush Mittal and
Pei{-}lin Mao},
title = {Effective Algorithms for Tag Snp Selection},
journal = {J. Bioinform. Comput. Biol.},
volume = {3},
number = {5},
pages = {1089--1106},
year = {2005},
url = {https://doi.org/10.1142/S0219720005001521},
doi = {10.1142/S0219720005001521},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/LiuSLLMM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/ChoyJSS05,
author = {Charles Choy and
Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Computing the maximum agreement of phylogenetic networks},
journal = {Theor. Comput. Sci.},
volume = {335},
number = {1},
pages = {93--107},
year = {2005},
url = {https://doi.org/10.1016/j.tcs.2004.12.012},
doi = {10.1016/J.TCS.2004.12.012},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcs/ChoyJSS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YiuCLSTW05,
author = {Siu{-}Ming Yiu and
P. Y. Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting and
Prudence W. H. Wong},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Allowing mismatches in anchors for wholw genome alignment: Generation
and effectiveness},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {1--10},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/192.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/YiuCLSTW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChuaS05,
author = {Hon Nian Chua and
Wing{-}Kin Sung},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A better gap penalty for pairwise {SVM}},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {11--20},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/118.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChuaS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HeHJS05,
author = {Ying{-}Jun He and
Trinh N. D. Huynh and
Jesper Jansson and
Wing{-}Kin Sung},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Inferring phylogenetic relationships avoiding forbidden rooted triplets},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {339--348},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/173.pdf},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HeHJS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/LiuMS05,
author = {Yingren Liu and
Karuturi R. Krishna Murthy and
Wing{-}Kin Sung},
title = {ConstrainedMotif: {A} Periodicity Constraint Based Algorithm to Predict
Cell-Cycle Associated Promoter Motifs Using Time-Course Gene Expression
Data},
booktitle = {Fifth {IEEE} International Symposium on Bioinformatic and Bioengineering
{(BIBE} 2005), 19-21 October 2005, Minneapolis, MN, {USA}},
pages = {250--257},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/BIBE.2005.18},
doi = {10.1109/BIBE.2005.18},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/LiuMS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/LiSM05,
author = {Yi Li and
Wing{-}Kin Sung and
Lance D. Miller},
title = {Multimodality as a Criterion for Feature Selection in Unsupervised
Analysis of Gene Expression Data},
booktitle = {Fifth {IEEE} International Symposium on Bioinformatic and Bioengineering
{(BIBE} 2005), 19-21 October 2005, Minneapolis, MN, {USA}},
pages = {276--280},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/BIBE.2005.42},
doi = {10.1109/BIBE.2005.42},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/LiSM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/LamSW05,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Swee{-}Seong Wong},
editor = {Xiaotie Deng and
Ding{-}Zhu Du},
title = {Improved Approximate String Matching Using Compressed Suffix Data
Structures},
booktitle = {Algorithms and Computation, 16th International Symposium, {ISAAC}
2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3827},
pages = {339--348},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11602613\_35},
doi = {10.1007/11602613\_35},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isaac/LamSW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/NguyenNS05,
author = {Nguyen Bao Nguyen and
C. Thach Nguyen and
Wing{-}Kin Sung},
editor = {Xiaotie Deng and
Ding{-}Zhu Du},
title = {Fast Algorithms for Computing the Tripartition-Based Distance Between
Phylogenetic Networks},
booktitle = {Algorithms and Computation, 16th International Symposium, {ISAAC}
2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3827},
pages = {402--411},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11602613\_41},
doi = {10.1007/11602613\_41},
timestamp = {Fri, 19 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/NguyenNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mmsp/WangGTS05,
author = {De{-}Hong Wang and
Sheng Gao and
Qi Tian and
Wing{-}Kin Sung},
title = {Discriminative Fusion Approach for Automatic Image Annotation},
booktitle = {{IEEE} 7th Workshop on Multimedia Signal Processing, {MMSP} 2005,
October 30 2005 - November 2 2005, Shanghai, China},
pages = {1--4},
publisher = {{IEEE}},
year = {2005},
url = {https://doi.org/10.1109/MMSP.2005.248595},
doi = {10.1109/MMSP.2005.248595},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/mmsp/WangGTS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HuynhJNS05,
author = {Trinh N. D. Huynh and
Jesper Jansson and
Nguyen Bao Nguyen and
Wing{-}Kin Sung},
editor = {Satoru Miyano and
Jill P. Mesirov and
Simon Kasif and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Constructing a Smallest Refining Galled Phylogenetic Network},
booktitle = {Research in Computational Molecular Biology, 9th Annual International
Conference, {RECOMB} 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3500},
pages = {265--280},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11415770\_20},
doi = {10.1007/11415770\_20},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HuynhJNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sirocco/DobrevJSS05,
author = {Stefan Dobrev and
Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Andrzej Pelc and
Michel Raynal},
title = {Finding Short Right-Hand-on-the-Wall Walks in Graphs},
booktitle = {Structural Information and Communication Complexity, 12th International
Colloquium, {SIROCCO} 2005, Mont Saint-Michel, France, May 24-26,
2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3499},
pages = {127--139},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11429647\_12},
doi = {10.1007/11429647\_12},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sirocco/DobrevJSS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/JanssonNS05,
author = {Jesper Jansson and
Nguyen Bao Nguyen and
Wing{-}Kin Sung},
title = {Algorithms for combining rooted triplets into a galled phylogenetic
network},
booktitle = {Proceedings of the Sixteenth Annual {ACM-SIAM} Symposium on Discrete
Algorithms, {SODA} 2005, Vancouver, British Columbia, Canada, January
23-25, 2005},
pages = {349--358},
publisher = {{SIAM}},
year = {2005},
url = {http://dl.acm.org/citation.cfm?id=1070432.1070481},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/soda/JanssonNS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangLS04,
author = {Jiren Wang and
Kuo{-}Bin Li and
Wing{-}Kin Sung},
title = {{G-PRIMER:} greedy algorithm for selecting minimal primer set},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2473--2475},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth259},
doi = {10.1093/BIOINFORMATICS/BTH259},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/HonLYKS04,
author = {Wing{-}Kai Hon and
Tak Wah Lam and
Siu{-}Ming Yiu and
Ming{-}Yang Kao and
Wing{-}Kin Sung},
title = {Subtree Transfer Distance For Degree-D Phylogenies},
journal = {Int. J. Found. Comput. Sci.},
volume = {15},
number = {6},
pages = {893--909},
year = {2004},
url = {https://doi.org/10.1142/S0129054104002807},
doi = {10.1142/S0129054104002807},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijfcs/HonLYKS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/HonKLSY04,
author = {Wing{-}Kai Hon and
Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {Non-shared edges and nearest neighbor interchanges revisited},
journal = {Inf. Process. Lett.},
volume = {91},
number = {3},
pages = {129--134},
year = {2004},
url = {https://doi.org/10.1016/j.ipl.2004.04.003},
doi = {10.1016/J.IPL.2004.04.003},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ipl/HonKLSY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alenex/HonLSTWY04,
author = {Wing{-}Kai Hon and
Tak Wah Lam and
Wing{-}Kin Sung and
Wai{-}Leuk Tse and
Chi{-}Kwong Wong and
Siu{-}Ming Yiu},
editor = {Lars Arge and
Giuseppe F. Italiano and
Robert Sedgewick},
title = {Practical aspects of Compressed Suffix Arrays and FM-Index in Searching
{DNA} Sequences},
booktitle = {Proceedings of the Sixth Workshop on Algorithm Engineering and Experiments
and the First Workshop on Analytic Algorithmics and Combinatorics,
New Orleans, LA, USA, January 10, 2004},
pages = {31--38},
publisher = {{SIAM}},
year = {2004},
timestamp = {Fri, 21 Apr 2006 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alenex/HonLSTWY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/DongSST04,
author = {Xiaoan Dong and
Sam Yuan Sung and
Wing{-}Kin Sung and
Chew Lim Tan},
title = {Constraint Based Method for Finding Motifs in {DNA} Sequences},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {483--492},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317381},
doi = {10.1109/BIBE.2004.1317381},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/DongSST04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ChanLSWY04,
author = {Ho{-}Leung Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Prudence W. H. Wong and
Siu{-}Ming Yiu},
title = {A Mutation-Sensitive Approach for Locating Conserved Gene Pairs between
Related Species},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {545--552},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317390},
doi = {10.1109/BIBE.2004.1317390},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ChanLSWY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/TanSN04,
author = {Soon{-}Heng Tan and
Wing{-}Kin Sung and
See{-}Kiong Ng},
title = {Discovering Novel Interacting Motif Pairs from Large Protein-Protein
Interaction Datasets},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {568--575},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317393},
doi = {10.1109/BIBE.2004.1317393},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/TanSN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/JanssonS04,
author = {Jesper Jansson and
Wing{-}Kin Sung},
editor = {Kyung{-}Yong Chwa and
J. Ian Munro},
title = {Inferring a Level-1 Phylogenetic Network from a Dense Set of Rooted
Triplets},
booktitle = {Computing and Combinatorics, 10th Annual International Conference,
{COCOON} 2004, Jeju Island, Korea, August 17-20, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3106},
pages = {462--472},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-27798-9\_49},
doi = {10.1007/978-3-540-27798-9\_49},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/JanssonS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/HuynhHLS04,
author = {Trinh N. D. Huynh and
Wing{-}Kai Hon and
Tak Wah Lam and
Wing{-}Kin Sung},
editor = {S{\"{u}}leyman Cenk Sahinalp and
S. Muthukrishnan and
Ugur Dogrus{\"{o}}z},
title = {Approximate String Matching Using Compressed Suffix Arrays},
booktitle = {Combinatorial Pattern Matching, 15th Annual Symposium, {CPM} 2004,
Istanbul,Turkey, July 5-7, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3109},
pages = {434--444},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-27801-6\_33},
doi = {10.1007/978-3-540-27801-6\_33},
timestamp = {Fri, 07 May 2021 12:57:04 +0200},
biburl = {https://dblp.org/rec/conf/cpm/HuynhHLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/HonLSSY04,
author = {Wing{-}Kai Hon and
Tak Wah Lam and
Kunihiko Sadakane and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {Compressed Index for Dynamic Text},
booktitle = {2004 Data Compression Conference {(DCC} 2004), 23-25 March 2004, Snowbird,
UT, {USA}},
pages = {102--111},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/DCC.2004.1281455},
doi = {10.1109/DCC.2004.1281455},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/HonLSSY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/LiuSM04,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Ankush Mittal},
editor = {Ram{\'{o}}n L{\'{o}}pez de M{\'{a}}ntaras and
Lorenza Saitta},
title = {Gene Network Modeling through Semi-Fixed Bayesian Network},
booktitle = {Proceedings of the 16th Eureopean Conference on Artificial Intelligence,
ECAI'2004, including Prestigious Applicants of Intelligent Systems,
{PAIS} 2004, Valencia, Spain, August 22-27, 2004},
pages = {373--377},
publisher = {{IOS} Press},
year = {2004},
timestamp = {Fri, 11 May 2018 12:42:30 +0200},
biburl = {https://dblp.org/rec/conf/ecai/LiuSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/WangTGS04,
author = {De{-}Hong Wang and
Qi Tian and
Sheng Gao and
Wing{-}Kin Sung},
title = {News sports video shot classification with sports play field and motion
features},
booktitle = {Proceedings of the 2004 International Conference on Image Processing,
{ICIP} 2004, Singapore, October 24-27, 2004},
pages = {2247--2250},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/ICIP.2004.1421545},
doi = {10.1109/ICIP.2004.1421545},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icip/WangTGS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictai/LiuSM04,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Ankush Mittal},
title = {Learning Multi-Time Delay Gene Network Using Bayesian Network Framework},
booktitle = {16th {IEEE} International Conference on Tools with Artificial Intelligence
{(ICTAI} 2004), 15-17 November 2004, Boca Raton, FL, {USA}},
pages = {640--645},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/ICTAI.2004.79},
doi = {10.1109/ICTAI.2004.79},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ictai/LiuSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/JanssonHS04,
author = {Jesper Jansson and
Ngo Trung Hieu and
Wing{-}Kin Sung},
editor = {Rudolf Fleischer and
Gerhard Trippen},
title = {Local Gapped Subforest Alignment and Its Application in Finding {RNA}
Structural Motifs},
booktitle = {Algorithms and Computation, 15th International Symposium, {ISAAC}
2004, Hong Kong, China, December 20-22, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3341},
pages = {569--580},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30551-4\_50},
doi = {10.1007/978-3-540-30551-4\_50},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/JanssonHS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/JanssonS04,
author = {Jesper Jansson and
Wing{-}Kin Sung},
editor = {Rudolf Fleischer and
Gerhard Trippen},
title = {The Maximum Agreement of Two Nested Phylogenetic Networks},
booktitle = {Algorithms and Computation, 15th International Symposium, {ISAAC}
2004, Hong Kong, China, December 20-22, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3341},
pages = {581--593},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30551-4\_51},
doi = {10.1007/978-3-540-30551-4\_51},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/JanssonS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/latin/JanssonNSS04,
author = {Jesper Jansson and
Joseph H.{-}K. Ng and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Martin Farach{-}Colton},
title = {Rooted Maximum Agreement Supertrees},
booktitle = {{LATIN} 2004: Theoretical Informatics, 6th Latin American Symposium,
Buenos Aires, Argentina, April 5-8, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2976},
pages = {499--508},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-24698-5\_53},
doi = {10.1007/978-3-540-24698-5\_53},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/latin/JanssonNSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/ChinnasamySM04,
author = {Arunkumar Chinnasamy and
Wing{-}Kin Sung and
Ankush Mittal},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany A. Jung and
Teri E. Klein},
title = {Protein Structure and Fold Prediction Using Tree-Augmented Bayesian
Classifier},
booktitle = {Biocomputing 2004, Proceedings of the Pacific Symposium, Hawaii, USA,
6-10 January 2004},
pages = {387--398},
publisher = {World Scientific},
year = {2004},
url = {http://psb.stanford.edu/psb-online/proceedings/psb04/chinnasamy.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/ChinnasamySM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/JanssonNSW04,
author = {Jesper Jansson and
See{-}Kiong Ng and
Wing{-}Kin Sung and
Hugo Willy},
editor = {Inge Jonassen and
Junhyong Kim},
title = {A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations
of {RNA} Sequences Through Alignment},
booktitle = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004,
Bergen, Norway, September 17-21, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3240},
pages = {302--313},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-30219-3\_26},
doi = {10.1007/978-3-540-30219-3\_26},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/JanssonNSW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/entcs/ChoyJSS04,
author = {Charles Choy and
Jesper Jansson and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Mike D. Atkinson},
title = {Computing the Maximum Agreement of Phylogenetic Networks},
booktitle = {Proceedings of Computing: The Australasian Theory Symposium, {CATS}
2004, Dunedin, New Zealand, January 19-20, 2004},
series = {Electronic Notes in Theoretical Computer Science},
volume = {91},
pages = {134--147},
publisher = {Elsevier},
year = {2004},
url = {https://doi.org/10.1016/j.entcs.2003.12.009},
doi = {10.1016/J.ENTCS.2003.12.009},
timestamp = {Fri, 11 Nov 2022 16:02:51 +0100},
biburl = {https://dblp.org/rec/journals/entcs/ChoyJSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/IeongKLSY03,
author = {Samuel Ieong and
Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {Predicting {RNA} Secondary Structures with Arbitrary Pseudoknots by
Maximizing the Number of Stacking Pairs},
journal = {J. Comput. Biol.},
volume = {10},
number = {6},
pages = {981--995},
year = {2003},
url = {https://doi.org/10.1089/106652703322756186},
doi = {10.1089/106652703322756186},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/IeongKLSY03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/KaoSS03,
author = {Ming{-}Yang Kao and
Jared Samet and
Wing{-}Kin Sung},
title = {The Enhanced Double Digest Problem for {DNA} Physical Mapping},
journal = {J. Comb. Optim.},
volume = {7},
number = {1},
pages = {69--78},
year = {2003},
url = {https://doi.org/10.1023/A:1021946523069},
doi = {10.1023/A:1021946523069},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jco/KaoSS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caip/MittalS03,
author = {Ankush Mittal and
Wing{-}Kin Sung},
editor = {Nicolai Petkov and
Michel A. Westenberg},
title = {Video Retrieval by Context-Based Interpretation of Time-to-Collision
Descriptors},
booktitle = {Computer Analysis of Images and Patterns, 10th International Conference,
{CAIP} 2003, Groningen, The Netherlands, August 25-27, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2756},
pages = {206--213},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-45179-2\_26},
doi = {10.1007/978-3-540-45179-2\_26},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/caip/MittalS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/FuHS03,
author = {Wei Fu and
Wing{-}Kai Hon and
Wing{-}Kin Sung},
editor = {Tandy J. Warnow and
Binhai Zhu},
title = {On All-Substrings Alignment Problems},
booktitle = {Computing and Combinatorics, 9th Annual International Conference,
{COCOON} 2003, Big Sky, MT, USA, July 25-28, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2697},
pages = {80--89},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/3-540-45071-8\_10},
doi = {10.1007/3-540-45071-8\_10},
timestamp = {Tue, 14 May 2019 10:00:35 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/FuHS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SungL03,
author = {Wing{-}Kin Sung and
Wah{-}Heng Lee},
title = {Fast and Accurate Probe Selection Algorithm for Large Genomes},
booktitle = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
Stanford, CA, USA, August 11-14, 2003},
pages = {65--74},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CSB.2003.1227305},
doi = {10.1109/CSB.2003.1227305},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/SungL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/focs/HonSS03,
author = {Wing{-}Kai Hon and
Kunihiko Sadakane and
Wing{-}Kin Sung},
title = {Breaking a Time-and-Space Barrier in Constructing Full-Text Indices},
booktitle = {44th Symposium on Foundations of Computer Science {(FOCS} 2003), 11-14
October 2003, Cambridge, MA, USA, Proceedings},
pages = {251--260},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/SFCS.2003.1238199},
doi = {10.1109/SFCS.2003.1238199},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/focs/HonSS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/LiuSMM03,
author = {Tie{-}Fei Liu and
Wing{-}Kin Sung and
Pei{-}lin Mao and
Ankush Mittal},
title = {Tag {SNP} selection by brute-force and heuristic algorithms},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 2003,
October 12-14, 2003, Neuherberg/Garching near Munich, Germany},
pages = {89--93},
year = {2003},
timestamp = {Tue, 15 Mar 2005 13:11:15 +0100},
biburl = {https://dblp.org/rec/conf/gcb/LiuSMM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/HonLSS03,
author = {Wing{-}Kai Hon and
Tak Wah Lam and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Toshihide Ibaraki and
Naoki Katoh and
Hirotaka Ono},
title = {Constructing Compressed Suffix Arrays with Large Alphabets},
booktitle = {Algorithms and Computation, 14th International Symposium, {ISAAC}
2003, Kyoto, Japan, December 15-17, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2906},
pages = {240--249},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-24587-2\_26},
doi = {10.1007/978-3-540-24587-2\_26},
timestamp = {Fri, 29 Dec 2023 12:40:31 +0100},
biburl = {https://dblp.org/rec/conf/isaac/HonLSS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/HonSS03,
author = {Wing{-}Kai Hon and
Kunihiko Sadakane and
Wing{-}Kin Sung},
editor = {Toshihide Ibaraki and
Naoki Katoh and
Hirotaka Ono},
title = {Succinct Data Structures for Searchable Partial Sums},
booktitle = {Algorithms and Computation, 14th International Symposium, {ISAAC}
2003, Kyoto, Japan, December 15-17, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2906},
pages = {505--516},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-24587-2\_52},
doi = {10.1007/978-3-540-24587-2\_52},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isaac/HonSS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tsmc/SungYYCHL02,
author = {Wing{-}Kin Sung and
David Yang and
Siu{-}Ming Yiu and
David Wai{-}Lok Cheung and
Wai{-}Shing Ho and
Tak Wah Lam},
title = {Automatic construction of online catalog topologies},
journal = {{IEEE} Trans. Syst. Man Cybern. Part {C}},
volume = {32},
number = {4},
pages = {382--391},
year = {2002},
url = {https://doi.org/10.1109/TSMCC.2002.806055},
doi = {10.1109/TSMCC.2002.806055},
timestamp = {Thu, 21 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tsmc/SungYYCHL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoon/LamSSY02,
author = {Tak Wah Lam and
Kunihiko Sadakane and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Oscar H. Ibarra and
Louxin Zhang},
title = {A Space and Time Efficient Algorithm for Constructing Compressed Suffix
Arrays},
booktitle = {Computing and Combinatorics, 8th Annual International Conference,
{COCOON} 2002, Singapore, August 15-17, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2387},
pages = {401--410},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45655-4\_43},
doi = {10.1007/3-540-45655-4\_43},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cocoon/LamSSY02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/LeongPSW02,
author = {Hon Wai Leong and
Franco P. Preparata and
Wing{-}Kin Sung and
Hugo Willy},
editor = {Roderic Guig{\'{o}} and
Dan Gusfield},
title = {On the Control of Hybridization Noise in {DNA} Sequencing-by-Hybridization},
booktitle = {Algorithms in Bioinformatics, Second International Workshop, {WABI}
2002, Rome, Italy, September 17-21, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2452},
pages = {392--403},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45784-4\_29},
doi = {10.1007/3-540-45784-4\_29},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/LeongPSW02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-DS-0211009,
author = {Wing{-}Kai Hon and
Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {Improved Phylogeny Comparisons: Non-Shared Edges Nearest Neighbor
Interchanges, and Subtree Transfers},
journal = {CoRR},
volume = {cs.DS/0211009},
year = {2002},
url = {http://arxiv.org/abs/cs/0211009},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-DS-0211009.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/KaoLST01,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {An Even Faster and More Unifying Algorithm for Comparing Trees via
Unbalanced Bipartite Matchings},
journal = {J. Algorithms},
volume = {40},
number = {2},
pages = {212--233},
year = {2001},
url = {https://doi.org/10.1006/jagm.2001.1163},
doi = {10.1006/JAGM.2001.1163},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jal/KaoLST01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/KaoLST01,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {A Decomposition Theorem for Maximum Weight Bipartite Matchings},
journal = {{SIAM} J. Comput.},
volume = {31},
number = {1},
pages = {18--26},
year = {2001},
url = {https://doi.org/10.1137/S0097539799361208},
doi = {10.1137/S0097539799361208},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamcomp/KaoLST01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/IeongKLSY01,
author = {Samuel Ieong and
Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Nikolaos G. Bourbakis},
title = {Predicting {RNA} Secondary Structures with Arbitrary Pseudoknots by
Maximizing the Number of Stacking Pairs},
booktitle = {2nd {IEEE} International Symposium on Bioinformatics and Bioengineering,
Bethesda, Maryland, USA, November 4-5, 2001, Proceedings},
pages = {183--190},
publisher = {{IEEE} Computer Society},
year = {2001},
url = {https://doi.org/10.1109/BIBE.2001.974428},
doi = {10.1109/BIBE.2001.974428},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/IeongKLSY01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecweb/SungYYHCL01,
author = {Wing{-}Kin Sung and
David Yang and
Siu{-}Ming Yiu and
Wai{-}Shing Ho and
David Wai{-}Lok Cheung and
Tak Wah Lam},
editor = {Kurt Bauknecht and
Sanjay Kumar Madria and
G{\"{u}}nther Pernul},
title = {Automatic Construction of Online Catalog Topologies},
booktitle = {Electronic Commerce and Web Technologies, Second International Conference,
EC-Web 2001 Munich, Germany, September 4-6, 2001, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2115},
pages = {216--225},
publisher = {Springer},
year = {2001},
url = {https://doi.org/10.1007/3-540-44700-8\_21},
doi = {10.1007/3-540-44700-8\_21},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ecweb/SungYYHCL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/www/SungTYCTS01,
author = {Wing{-}Kin Sung and
Frank C. H. Tong and
Kwok{-}Ho Yeung and
David Wai{-}Lok Cheung and
Chung{-}Jen Tan and
William Wei Song},
editor = {Vincent Y. Shen and
Nobuo Saito and
Michael R. Lyu and
Mary Ellen Zurko},
title = {Pervasive Multimedia Markup Language {(PMML):} an XML-based multimedia
content specification for pervasive access},
booktitle = {Poster Proceedings of the Tenth International World Wide Web Conference,
{WWW} 10, Hong Kong, China, May 1-5, 2001},
year = {2001},
url = {http://www10.org/cdrom/posters/1079.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/www/SungTYCTS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-CE-0101031,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {Cavity Matchings, Label Compressions, and Unrooted Evolutionary Trees},
journal = {CoRR},
volume = {cs.CE/0101031},
year = {2001},
url = {https://arxiv.org/abs/cs/0101031},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-CE-0101031.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-CE-0102010,
author = {Ming{-}Yang Kao and
Jared Samet and
Wing{-}Kin Sung},
title = {The Enhanced Double Digest Problem for {DNA} Physical Mapping},
journal = {CoRR},
volume = {cs.CE/0102010},
year = {2001},
url = {https://arxiv.org/abs/cs/0102010},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-CE-0102010.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-CE-0111051,
author = {Samuel Ieong and
Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Siu{-}Ming Yiu},
title = {Predicting {RNA} Secondary Structures with Arbitrary Pseudoknots by
Maximizing the Number of Stacking Pairs},
journal = {CoRR},
volume = {cs.CE/0111051},
year = {2001},
url = {https://arxiv.org/abs/cs/0111051},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-CE-0111051.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-CV-0101010,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {An Even Faster and More Unifying Algorithm for Comparing Trees via
Unbalanced Bipartite Matchings},
journal = {CoRR},
volume = {cs.CV/0101010},
year = {2001},
url = {https://arxiv.org/abs/cs/0101010},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-CV-0101010.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/KaoLST00,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {Cavity Matchings, Label Compressions, and Unrooted Evolutionary Trees},
journal = {{SIAM} J. Comput.},
volume = {30},
number = {2},
pages = {602--624},
year = {2000},
url = {https://doi.org/10.1137/S0097539797332275},
doi = {10.1137/S0097539797332275},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamcomp/KaoLST00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/KaoLST00,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Raffaele Giancarlo and
David Sankoff},
title = {A Faster and Unifying Algorithm for Comparing Trees},
booktitle = {Combinatorial Pattern Matching, 11th Annual Symposium, {CPM} 2000,
Montreal, Canada, June 21-23, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1848},
pages = {129--142},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-45123-4\_13},
doi = {10.1007/3-540-45123-4\_13},
timestamp = {Tue, 14 May 2019 10:00:38 +0200},
biburl = {https://dblp.org/rec/conf/cpm/KaoLST00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/KaoLST00,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {D. T. Lee and
Shang{-}Hua Teng},
title = {Unbalanced and Hierarchical Bipartite Matchings with Applications
to Labeled Tree Comparison},
booktitle = {Algorithms and Computation, 11th International Conference, {ISAAC}
2000, Taipei, Taiwan, December 18-20, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1969},
pages = {479--490},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-40996-3\_41},
doi = {10.1007/3-540-40996-3\_41},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/KaoLST00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/KaoSS00,
author = {Ming{-}Yang Kao and
Jared Samet and
Wing{-}Kin Sung},
editor = {Magn{\'{u}}s M. Halld{\'{o}}rsson},
title = {The Enhanced Double Digest Problem for {DNA} Physical Mapping},
booktitle = {Algorithm Theory - {SWAT} 2000, 7th Scandinavian Workshop on Algorithm
Theory, Bergen, Norway, July 5-7, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1851},
pages = {383--392},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-44985-X\_33},
doi = {10.1007/3-540-44985-X\_33},
timestamp = {Fri, 27 Mar 2020 08:50:36 +0100},
biburl = {https://dblp.org/rec/conf/swat/KaoSS00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wecwis/YangSYCHLL00,
author = {David Yang and
Wing{-}Kin Sung and
Siu{-}Ming Yiu and
David Wai{-}Lok Cheung and
Wai{-}Shing Ho and
Tak Wah Lam and
Sau Dan Lee},
title = {Construction of Online Catalog Topologies Using Decision Trees},
booktitle = {Second International Workshop on Advance Issues of E-Commerce and
Web-Based Information Systems {(WECWIS} 2000), Milpitas, California,
USA, June 8-9, 2000},
pages = {223--230},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/WECWIS.2000.853879},
doi = {10.1109/WECWIS.2000.853879},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wecwis/YangSYCHLL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/cs-DS-0011015,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {A Decomposition Theorem for Maximum Weight Bipartite Matchings},
journal = {CoRR},
volume = {cs.DS/0011015},
year = {2000},
url = {https://arxiv.org/abs/cs/0011015},
timestamp = {Fri, 10 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/cs-DS-0011015.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/KaoLST99,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Jaroslav Nesetril},
title = {A Decomposition Theorem for Maximum Weight Bipartite Matchings with
Applications to Evolutionary Trees},
booktitle = {Algorithms - {ESA} '99, 7th Annual European Symposium, Prague, Czech
Republic, July 16-18, 1999, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1643},
pages = {438--449},
publisher = {Springer},
year = {1999},
url = {https://doi.org/10.1007/3-540-48481-7\_38},
doi = {10.1007/3-540-48481-7\_38},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/esa/KaoLST99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/hk/Sung98,
author = {Wing{-}Kin Sung},
title = {Fast labeled tree comparison via better matching algorithms},
school = {University of Hong Kong},
year = {1998},
url = {https://doi.org/10.5353/th\_b3123931},
doi = {10.5353/TH\_B3123931},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/hk/Sung98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cats/KaoLST98,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Xuemin Lin},
title = {Default-Sensitive PreProcessings for Finding Maxima},
booktitle = {Proceedings of Computing: The Fourth Australasian Theory Symposium
(CATS'98), Perth, WA, Australia, February 2-3, 1998},
series = {Australian Computer Science Communications},
volume = {20},
number = {3},
pages = {107--120},
publisher = {Springer-Verlag Singapore Pte. Ltd.},
year = {1998},
timestamp = {Mon, 16 Mar 2020 17:44:09 +0100},
biburl = {https://dblp.org/rec/conf/cats/KaoLST98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/KaoLST97,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Hon Wai Leong and
Hiroshi Imai and
Sanjay Jain},
title = {All-Cavity Maximum Matchings},
booktitle = {Algorithms and Computation, 8th International Symposium, {ISAAC} '97,
Singapore, December 17-19, 1997, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1350},
pages = {364--373},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/3-540-63890-3\_39},
doi = {10.1007/3-540-63890-3\_39},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isaac/KaoLST97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/KaoLPST97,
author = {Ming{-}Yang Kao and
Tak Wah Lam and
Teresa M. Przytycka and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Frank Thomson Leighton and
Peter W. Shor},
title = {General Techniques for Comparing Unrooted Evolutionary Trees},
booktitle = {Proceedings of the Twenty-Ninth Annual {ACM} Symposium on the Theory
of Computing, El Paso, Texas, USA, May 4-6, 1997},
pages = {54--65},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/258533.258550},
doi = {10.1145/258533.258550},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/KaoLPST97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/njc/LamST96,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
title = {Computing the Unrooted Maximum Agreement Subtree in Sub-quadratic
Time},
journal = {Nord. J. Comput.},
volume = {3},
number = {4},
pages = {295--322},
year = {1996},
timestamp = {Mon, 24 Jul 2006 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/njc/LamST96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/LamST96,
author = {Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting},
editor = {Rolf G. Karlsson and
Andrzej Lingas},
title = {Computing the Unrooted Maximum Agreement Subtree in Sub-quadratic
Time},
booktitle = {Algorithm Theory - {SWAT} '96, 5th Scandinavian Workshop on Algorithm
Theory, Reykjav{\'{\i}}k, Iceland, July 3-5, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1097},
pages = {124--135},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61422-2\_126},
doi = {10.1007/3-540-61422-2\_126},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/LamST96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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