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ORCIDBibTeX records: Terence P. Speed
@article{DBLP:journals/ma/SpeedH22,
author = {Terence P. Speed and
Damien G. Hicks},
title = {Spectral {PCA} for {MANOVA} and data over binary trees},
journal = {J. Multivar. Anal.},
volume = {188},
pages = {104905},
year = {2022},
url = {https://doi.org/10.1016/j.jmva.2021.104905},
doi = {10.1016/J.JMVA.2021.104905},
timestamp = {Fri, 21 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ma/SpeedH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuaglieriFSM20,
author = {Anna Quaglieri and
Christoffer Flensburg and
Terence P. Speed and
Ian J. Majewski},
title = {Finding a suitable library size to call variants in RNA-Seq},
journal = {{BMC} Bioinform.},
volume = {21},
number = {1},
pages = {553},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03860-4},
doi = {10.1186/S12859-020-03860-4},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/QuaglieriFSM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PetersFBPSVNQSG19,
author = {Timothy J. Peters and
Hugh J. French and
Stephen T. Bradford and
Ruth Pidsley and
Clare Stirzaker and
Hilal Varinli and
Shalima Nair and
Wenjia Qu and
Jenny Song and
Katherine A. Giles and
Aaron L. Statham and
Helen Speirs and
Terence P. Speed and
Susan J. Clark},
title = {Evaluation of cross-platform and interlaboratory concordance via consensus
modelling of genomic measurements},
journal = {Bioinform.},
volume = {35},
number = {4},
pages = {560--570},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/bty675},
doi = {10.1093/BIOINFORMATICS/BTY675},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PetersFBPSVNQSG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YeSS19,
author = {Chengzhong Ye and
Terence P. Speed and
Agus Salim},
title = {{DECENT:} differential expression with capture efficiency adjustmeNT
for single-cell RNA-seq data},
journal = {Bioinform.},
volume = {35},
number = {24},
pages = {5155--5162},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/btz453},
doi = {10.1093/BIOINFORMATICS/BTZ453},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YeSS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HicksSYR19,
author = {Damien G. Hicks and
Terence P. Speed and
Mohammed Yassin and
Sarah M. Russell},
title = {Maps of variability in cell lineage trees},
journal = {PLoS Comput. Biol.},
volume = {15},
number = {2},
year = {2019},
url = {https://doi.org/10.1371/journal.pcbi.1006745},
doi = {10.1371/JOURNAL.PCBI.1006745},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/HicksSYR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FreytagGSB15,
author = {Saskia Freytag and
Johann Gagnon{-}Bartsch and
Terence P. Speed and
Melanie Bahlo},
title = {Systematic noise degrades gene co-expression signals but can be corrected},
journal = {{BMC} Bioinform.},
volume = {16},
pages = {309:1--309:17},
year = {2015},
url = {https://doi.org/10.1186/s12859-015-0745-3},
doi = {10.1186/S12859-015-0745-3},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FreytagGSB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimJS14,
author = {Su Yeon Kim and
Laurent Jacob and
Terence P. Speed},
title = {Combining calls from multiple somatic mutation-callers},
journal = {{BMC} Bioinform.},
volume = {15},
pages = {154},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-154},
doi = {10.1186/1471-2105-15-154},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimJS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimS13,
author = {Su Yeon Kim and
Terence P. Speed},
title = {Comparing somatic mutation-callers: Beyond Venn diagrams},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {189},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-189},
doi = {10.1186/1471-2105-14-189},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangXOSSW12,
author = {Nianxiang Zhang and
Yan Xu and
Martin O'Hely and
Terence P. Speed and
Curt Scharfe and
Wenyi Wang},
title = {{SRMA:} an {R} package for resequencing array data analysis},
journal = {Bioinform.},
volume = {28},
number = {14},
pages = {1928--1930},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts286},
doi = {10.1093/BIOINFORMATICS/BTS286},
timestamp = {Fri, 26 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangXOSSW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HillLMHSSGMM12,
author = {Steven M. Hill and
Yiling Lu and
Jennifer Molina and
Laura Heiser and
Paul T. Spellman and
Terence P. Speed and
Joe W. Gray and
Gordon B. Mills and
Sach Mukherjee},
title = {Bayesian Inference of Signaling Network Topology in a Cancer Cell
Line},
journal = {Bioinform.},
volume = {28},
number = {21},
pages = {2804--2810},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts514},
doi = {10.1093/BIOINFORMATICS/BTS514},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HillLMHSSGMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WoodcroftRYSDDMTSR11,
author = {Ben J. Woodcroft and
Robert Radloff and
Lee M. Yeoh and
Kristie{-}Lee Scanlon and
Maria A. Doyle and
Giel G. van Dooren and
Geoffrey I. McFadden and
Christopher J. Tonkin and
Terence P. Speed and
Stuart A. Ralph},
title = {An integrative bioinformatic predictor of protein sub-cellular localisation
in malaria},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-11}},
pages = {A6},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S11-A6},
doi = {10.1186/1471-2105-12-S11-A6},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WoodcroftRYSDDMTSR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangSTLPHKCPSDMSS11,
author = {Wenyi Wang and
Peidong Shen and
Sreedevi Thiyagarajan and
Shengrong Lin and
Curtis J. Palm and
Rita Horvath and
Thomas Klopstock and
David Cutler and
Lynn Pique and
Iris Schrijver and
Ronald W. Davis and
Michael Mindrinos and
Terence P. Speed and
Curt Scharfe},
title = {Identification of rare {DNA} variants in mitochondrial disorders with
improved array-based sequencing},
journal = {Nucleic Acids Res.},
volume = {39},
number = {1},
pages = {44--58},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq750},
doi = {10.1093/NAR/GKQ750},
timestamp = {Fri, 26 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/WangSTLPHKCPSDMSS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BengtssonNS10,
author = {Henrik Bengtsson and
Pierre Neuvial and
Terence P. Speed},
title = {TumorBoost: Normalization of allele-specific tumor copy numbers from
a single pair of tumor-normal genotyping microarrays},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {245},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-245},
doi = {10.1186/1471-2105-11-245},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BengtssonNS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cominfsys/LipsonST10,
author = {Doron Lipson and
Terence P. Speed and
Margaret Taub},
title = {Methods for Allocating Ambiguous Short-reads},
journal = {Commun. Inf. Syst.},
volume = {10},
number = {2},
pages = {69--82},
year = {2010},
url = {https://doi.org/10.4310/cis.2010.v10.n2.a1},
doi = {10.4310/CIS.2010.V10.N2.A1},
timestamp = {Wed, 16 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cominfsys/LipsonST10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MukherjeePNKZSGS09,
author = {Sach Mukherjee and
Steven Pelech and
Richard M. Neve and
Wen{-}Lin Kuo and
Safiyyah Ziyad and
Paul T. Spellman and
Joe W. Gray and
Terence P. Speed},
title = {Sparse combinatorial inference with an application in cancer biology},
journal = {Bioinform.},
volume = {25},
number = {2},
pages = {265--271},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btn611},
doi = {10.1093/BIOINFORMATICS/BTN611},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MukherjeePNKZSGS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BengtssonRSS09,
author = {Henrik Bengtsson and
Amrita Ray and
Paul T. Spellman and
Terence P. Speed},
title = {A single-sample method for normalizing and combining full-resolution
copy numbers from multiple platforms, labs and analysis methods},
journal = {Bioinform.},
volume = {25},
number = {7},
pages = {861--867},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp074},
doi = {10.1093/BIOINFORMATICS/BTP074},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BengtssonRSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BengtssonWS09,
author = {Henrik Bengtsson and
Pratyaksha Wirapati and
Terence P. Speed},
title = {A single-array preprocessing method for estimating full-resolution
raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP
5 {\&} 6},
journal = {Bioinform.},
volume = {25},
number = {17},
pages = {2149--2156},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp371},
doi = {10.1093/BIOINFORMATICS/BTP371},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BengtssonWS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RobinsonS09,
author = {Mark D. Robinson and
Terence P. Speed},
title = {Differential splicing using whole-transcript microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-156},
doi = {10.1186/1471-2105-10-156},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RobinsonS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SuiZSW09,
author = {Yunxia Sui and
Xiaoyue Zhao and
Terence P. Speed and
Zhijin Wu},
title = {Background Adjustment for {DNA} Microarrays Using a Database of Microarray
Experiments},
journal = {J. Comput. Biol.},
volume = {16},
number = {11},
pages = {1501--1515},
year = {2009},
url = {https://doi.org/10.1089/cmb.2009.0063},
doi = {10.1089/CMB.2009.0063},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/SuiZSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BengtssonICS08,
author = {Henrik Bengtsson and
Rafael A. Irizarry and
Benilton S. Carvalho and
Terence P. Speed},
title = {Estimation and assessment of raw copy numbers at the single locus
level},
journal = {Bioinform.},
volume = {24},
number = {6},
pages = {759--767},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn016},
doi = {10.1093/BIOINFORMATICS/BTN016},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BengtssonICS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PurdomSRCLS08,
author = {E. Purdom and
Ken M. Simpson and
Mark D. Robinson and
J. G. Conboy and
A. V. Lapuk and
Terence P. Speed},
title = {{FIRMA:} a method for detection of alternative splicing from exon
array data},
journal = {Bioinform.},
volume = {24},
number = {15},
pages = {1707--1714},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn284},
doi = {10.1093/BIOINFORMATICS/BTN284},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PurdomSRCLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/technometrics/BrettschneiderC08,
author = {Julia Brettschneider and
Fran{\c{c}}ois Collin and
Benjamin M. Bolstad and
Terence P. Speed},
title = {Quality Assessment for Short Oligonucleotide Microarray Data},
journal = {Technometrics},
volume = {50},
number = {3},
pages = {241--264},
year = {2008},
url = {https://doi.org/10.1198/004017008000000334},
doi = {10.1198/004017008000000334},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/technometrics/BrettschneiderC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/technometrics/BrettschneiderC08a,
author = {Julia Brettschneider and
Fran{\c{c}}ois Collin and
Benjamin M. Bolstad and
Terence P. Speed},
title = {Rejoinder},
journal = {Technometrics},
volume = {50},
number = {3},
pages = {279--283},
year = {2008},
url = {https://doi.org/10.1198/004017008000000389},
doi = {10.1198/004017008000000389},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/technometrics/BrettschneiderC08a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RobinsonS07,
author = {Mark D. Robinson and
Terence P. Speed},
title = {A comparison of Affymetrix gene expression arrays},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-449},
doi = {10.1186/1471-2105-8-449},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RobinsonS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RobinsonSKSMSL07,
author = {Mark D. Robinson and
David P. De Souza and
Woon Wai Keen and
Eleanor C. Saunders and
Malcolm J. McConville and
Terence P. Speed and
Vladimir A. Likic},
title = {A dynamic programming approach for the alignment of signal peaks in
multiple gas chromatography-mass spectrometry experiments},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-419},
doi = {10.1186/1471-2105-8-419},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RobinsonSKSMSL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2007,
editor = {Terence P. Speed and
Haiyan Huang},
title = {Research in Computational Molecular Biology, 11th Annual International
Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4453},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-71681-5},
doi = {10.1007/978-3-540-71681-5},
isbn = {3-540-71680-7},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/2007.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RabbeeS06,
author = {Nusrat Rabbee and
Terence P. Speed},
title = {A genotype calling algorithm for affymetrix {SNP} arrays},
journal = {Bioinform.},
volume = {22},
number = {1},
pages = {7--12},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/bti741},
doi = {10.1093/BIOINFORMATICS/BTI741},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RabbeeS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhaoHS05,
author = {Xiaoyue Zhao and
Haiyan Huang and
Terence P. Speed},
title = {Finding Short {DNA} Motifs Using Permuted Markov Models},
journal = {J. Comput. Biol.},
volume = {12},
number = {6},
pages = {894--906},
year = {2005},
url = {https://doi.org/10.1089/cmb.2005.12.894},
doi = {10.1089/CMB.2005.12.894},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhaoHS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BeissbarthTSSA05,
author = {Tim Bei{\ss}barth and
Jason A. Tye{-}Din and
Gordon K. Smyth and
Terence P. Speed and
Robert P. Anderson},
title = {A systematic approach for comprehensive T-cell epitope discovery using
peptide libraries},
booktitle = {Proceedings Thirteenth International Conference on Intelligent Systems
for Molecular Biology 2005, Detroit, MI, USA, 25-29 June 2005},
pages = {29--37},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti1013},
doi = {10.1093/BIOINFORMATICS/BTI1013},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/BeissbarthTSSA05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CopeIJWS04,
author = {Leslie Cope and
Rafael A. Irizarry and
Harris A. Jaffee and
Zhijin Wu and
Terence P. Speed},
title = {A benchmark for Affymetrix GeneChip expression measures},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {323--331},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg410},
doi = {10.1093/BIOINFORMATICS/BTG410},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CopeIJWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhaoHS04,
author = {Xiaoyue Zhao and
Haiyan Huang and
Terence P. Speed},
editor = {Philip E. Bourne and
Dan Gusfield},
title = {Finding short {DNA} motifs using permuted markov models},
booktitle = {Proceedings of the Eighth Annual International Conference on Computational
Molecular Biology, 2004, San Diego, California, USA, March 27-31,
2004},
pages = {68--75},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/974614.974624},
doi = {10.1145/974614.974624},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZhaoHS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BolstadIAS03,
author = {Benjamin M. Bolstad and
Rafael A. Irizarry and
Magnus {\AA}strand and
Terence P. Speed},
title = {A comparison of normalization methods for high density oligonucleotide
array data based on variance and bias},
journal = {Bioinform.},
volume = {19},
number = {2},
pages = {185--193},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/19.2.185},
doi = {10.1093/BIOINFORMATICS/19.2.185},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BolstadIAS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigkdd/RubinsteinMCPRS03,
author = {Benjamin I. P. Rubinstein and
Jon D. McAuliffe and
Simon Cawley and
Marimuthu Palaniswami and
Kotagiri Ramamohanarao and
Terence P. Speed},
title = {Machine learning in low-level microarray analysis},
journal = {{SIGKDD} Explor.},
volume = {5},
number = {2},
pages = {130--139},
year = {2003},
url = {https://doi.org/10.1145/980972.980988},
doi = {10.1145/980972.980988},
timestamp = {Tue, 29 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sigkdd/RubinsteinMCPRS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Speed03,
author = {Terence P. Speed},
editor = {Martin Vingron and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman and
Webb Miller},
title = {Low-level analyses of microarray data},
booktitle = {Proceedings of the Sventh Annual International Conference on Computational
Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
pages = {287--287},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/640075.640112},
doi = {10.1145/640075.640112},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Speed03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DelorenziS02,
author = {Mauro Delorenzi and
Terence P. Speed},
title = {An {HMM} model for coiled-coil domains and a comparison with PSSM-based
predictions},
journal = {Bioinform.},
volume = {18},
number = {4},
pages = {617--625},
year = {2002},
url = {https://doi.org/10.1093/bioinformatics/18.4.617},
doi = {10.1093/BIOINFORMATICS/18.4.617},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DelorenziS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangBS01,
author = {Yee Hwa Yang and
Michael J. Buckley and
Terence P. Speed},
title = {Analysis of {CDNA} Microarray Images},
journal = {Briefings Bioinform.},
volume = {2},
number = {4},
pages = {341--349},
year = {2001},
url = {https://doi.org/10.1093/bib/2.4.341},
doi = {10.1093/BIB/2.4.341},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangBS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CawleyS00,
author = {Simon Cawley and
Terence P. Speed},
title = {{DNA} Sequencing with Transposons},
journal = {J. Comput. Biol.},
volume = {7},
number = {5},
pages = {717--729},
year = {2000},
url = {https://doi.org/10.1089/106652701446161},
doi = {10.1089/106652701446161},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/CawleyS00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LinS97,
author = {Shili Lin and
Terence P. Speed},
title = {An Algorithm for Haplotype Analysis},
journal = {J. Comput. Biol.},
volume = {4},
number = {4},
pages = {535--546},
year = {1997},
url = {https://doi.org/10.1089/cmb.1997.4.535},
doi = {10.1089/CMB.1997.4.535},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/LinS97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LinS97,
author = {Shili Lin and
Terence P. Speed},
editor = {Michael S. Waterman},
title = {An algorithm for haplotype analysis},
booktitle = {Proceedings of the First Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1997, Santa Fe, NM, USA,
January 20-23, 1997},
pages = {192--200},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267521.267548},
doi = {10.1145/267521.267548},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LinS97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Speed97,
author = {Terence P. Speed},
editor = {Michael S. Waterman},
title = {Variations on a theme of Lander and Waterman (abstract)},
booktitle = {Proceedings of the First Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1997, Santa Fe, NM, USA,
January 20-23, 1997},
pages = {293},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267521.270042},
doi = {10.1145/267521.270042},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Speed97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LeungMS96,
author = {Ming{-}Ying Leung and
G. M. Marsh and
Terence P. Speed},
title = {Over- and Underrepresentation of Short {DNA} Words in Herpesvirus
Genomes},
journal = {J. Comput. Biol.},
volume = {3},
number = {3},
pages = {345--360},
year = {1996},
url = {https://doi.org/10.1089/cmb.1996.3.345},
doi = {10.1089/CMB.1996.3.345},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/LeungMS96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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