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ORCIDBibTeX records: Heike Siebert
@article{DBLP:journals/biosystems/SchwiegerS22,
author = {Robert Schwieger and
Heike Siebert},
title = {Structure and behavior in Boolean monotonic model pools},
journal = {Biosyst.},
volume = {214},
pages = {104610},
year = {2022},
url = {https://doi.org/10.1016/j.biosystems.2022.104610},
doi = {10.1016/J.BIOSYSTEMS.2022.104610},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biosystems/SchwiegerS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fams/FontanalsTS22,
author = {Laura Cifuentes Fontanals and
Elisa Tonello and
Heike Siebert},
title = {Control in Boolean Networks With Model Checking},
journal = {Frontiers Appl. Math. Stat.},
volume = {8},
pages = {838546},
year = {2022},
url = {https://doi.org/10.3389/fams.2022.838546},
doi = {10.3389/FAMS.2022.838546},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fams/FontanalsTS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KlarnerHNS20,
author = {Hannes Klarner and
Frederike Heinitz and
Sarah Nee and
Heike Siebert},
title = {Basins of Attraction, Commitment Sets, and Phenotypes of Boolean Networks},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {17},
number = {4},
pages = {1115--1124},
year = {2020},
url = {https://doi.org/10.1109/TCBB.2018.2879097},
doi = {10.1109/TCBB.2018.2879097},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/KlarnerHNS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/FontanalsTS20,
author = {Laura Cifuentes Fontanals and
Elisa Tonello and
Heike Siebert},
editor = {Alessandro Abate and
Tatjana Petrov and
Verena Wolf},
title = {Control Strategy Identification via Trap Spaces in Boolean Networks},
booktitle = {Computational Methods in Systems Biology - 18th International Conference,
{CMSB} 2020, Konstanz, Germany, September 23-25, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12314},
pages = {159--175},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-60327-4\_9},
doi = {10.1007/978-3-030-60327-4\_9},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/FontanalsTS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/SchwiegerBSH20,
author = {Robert Schwieger and
Mat{\'{\i}}as R. Bender and
Heike Siebert and
Christian Haase},
editor = {Alessandro Abate and
Tatjana Petrov and
Verena Wolf},
title = {Classifier Construction in Boolean Networks Using Algebraic Methods},
booktitle = {Computational Methods in Systems Biology - 18th International Conference,
{CMSB} 2020, Konstanz, Germany, September 23-25, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12314},
pages = {210--233},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-60327-4\_12},
doi = {10.1007/978-3-030-60327-4\_12},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/SchwiegerBSH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThielCNPSM19,
author = {Denise Thiel and
Natasa Djurdjevac Conrad and
Evgenia Ntini and
Ria X. Peschutter and
Heike Siebert and
Annalisa Marsico},
title = {Identifying lncRNA-mediated regulatory modules via ChIA-PET network
analysis},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {292:1--292:16},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2900-8},
doi = {10.1186/S12859-019-2900-8},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThielCNPSM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/NowickaS19,
author = {Melania Nowicka and
Heike Siebert},
editor = {Luca Bortolussi and
Guido Sanguinetti},
title = {Designing Distributed Cell Classifier Circuits Using a Genetic Algorithm},
booktitle = {Computational Methods in Systems Biology - 17th International Conference,
{CMSB} 2019, Trieste, Italy, September 18-20, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11773},
pages = {96--119},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-31304-3\_6},
doi = {10.1007/978-3-030-31304-3\_6},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/NowickaS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1904-02544,
author = {Elisa Tonello and
Heike Siebert},
title = {Boolean analysis of lateral inhibition},
journal = {CoRR},
volume = {abs/1904.02544},
year = {2019},
url = {http://arxiv.org/abs/1904.02544},
eprinttype = {arXiv},
eprint = {1904.02544},
timestamp = {Wed, 24 Apr 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1904-02544.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/KlarnerBS18,
author = {Hannes Klarner and
Alexander Bockmayr and
Heike Siebert},
title = {Erratum to: Computing maximal and minimal trap spaces of Boolean networks},
journal = {Nat. Comput.},
volume = {17},
number = {2},
pages = {437},
year = {2018},
url = {https://doi.org/10.1007/s11047-016-9611-0},
doi = {10.1007/S11047-016-9611-0},
timestamp = {Thu, 02 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nc/KlarnerBS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamads/SchwiegerSR18,
author = {Robert Schwieger and
Heike Siebert and
Susanna R{\"{o}}blitz},
title = {Correspondence of Trap Spaces in Different Models of Bioregulatory
Networks},
journal = {{SIAM} J. Appl. Dyn. Syst.},
volume = {17},
number = {2},
pages = {1742--1765},
year = {2018},
url = {https://doi.org/10.1137/17M1155302},
doi = {10.1137/17M1155302},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/siamads/SchwiegerSR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KlarnerSS17,
author = {Hannes Klarner and
Adam Streck and
Heike Siebert},
title = {PyBoolNet: a python package for the generation, analysis and visualization
of boolean networks},
journal = {Bioinform.},
volume = {33},
number = {5},
pages = {770--772},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btw682},
doi = {10.1093/BIOINFORMATICS/BTW682},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KlarnerSS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/SchwiegerS17,
author = {Robert Schwieger and
Heike Siebert},
editor = {J{\'{e}}r{\^{o}}me Feret and
Heinz Koeppl},
title = {Graph Representations of Monotonic Boolean Model Pools},
booktitle = {Computational Methods in Systems Biology - 15th International Conference,
{CMSB} 2017, Darmstadt, Germany, September 27-29, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10545},
pages = {233--248},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-67471-1\_14},
doi = {10.1007/978-3-319-67471-1\_14},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/SchwiegerS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/StreckTS16,
author = {Adam Streck and
Kirsten Thobe and
Heike Siebert},
title = {Data-driven optimizations for model checking of multi-valued regulatory
networks},
journal = {Biosyst.},
volume = {149},
pages = {125--138},
year = {2016},
url = {https://doi.org/10.1016/j.biosystems.2016.05.004},
doi = {10.1016/J.BIOSYSTEMS.2016.05.004},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/StreckTS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YousefSSSHK15,
author = {Kaveh Yousef and
Adam Streck and
Christof Sch{\"{u}}tte and
Heike Siebert and
Regine Hengge and
Max von Kleist},
title = {Logical-continuous modelling of post-translationally regulated bistability
of curli fiber expression in Escherichia coli},
journal = {{BMC} Syst. Biol.},
volume = {9},
pages = {39},
year = {2015},
url = {https://doi.org/10.1186/s12918-015-0183-x},
doi = {10.1186/S12918-015-0183-X},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/YousefSSSHK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/KlarnerBS15,
author = {Hannes Klarner and
Alexander Bockmayr and
Heike Siebert},
title = {Computing maximal and minimal trap spaces of Boolean networks},
journal = {Nat. Comput.},
volume = {14},
number = {4},
pages = {535--544},
year = {2015},
url = {https://doi.org/10.1007/s11047-015-9520-7},
doi = {10.1007/S11047-015-9520-7},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nc/KlarnerBS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/StreckLS15,
author = {Adam Streck and
Therese Lorenz and
Heike Siebert},
title = {Minimization and equivalence in multi-valued logical models of regulatory
networks},
journal = {Nat. Comput.},
volume = {14},
number = {4},
pages = {555--566},
year = {2015},
url = {https://doi.org/10.1007/s11047-015-9525-2},
doi = {10.1007/S11047-015-9525-2},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nc/StreckLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/StreckTS15,
author = {Adam Streck and
Kirsten Thobe and
Heike Siebert},
editor = {Olivier F. Roux and
J{\'{e}}r{\'{e}}mie Bourdon},
title = {Analysing Cell Line Specific {EGFR} Signalling via Optimized Automata
Based Model Checking},
booktitle = {Computational Methods in Systems Biology - 13th International Conference,
{CMSB} 2015, Nantes, France, September 16-18, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9308},
pages = {264--276},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-23401-4\_22},
doi = {10.1007/978-3-319-23401-4\_22},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/StreckTS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hsb/StreckTS15,
author = {Adam Streck and
Kirsten Thobe and
Heike Siebert},
editor = {Alessandro Abate and
David Safr{\'{a}}nek},
title = {Comparative Statistical Analysis of Qualitative Parametrization Sets},
booktitle = {Hybrid Systems Biology - Fourth International Workshop, {HSB} 2015,
Madrid, Spain, September 4-5, 2015. Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {9271},
pages = {20--34},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-26916-0\_2},
doi = {10.1007/978-3-319-26916-0\_2},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/hsb/StreckTS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acri/KlarnerBS14,
author = {Hannes Klarner and
Alexander Bockmayr and
Heike Siebert},
editor = {Jaroslaw Was and
Georgios Ch. Sirakoulis and
Stefania Bandini},
title = {Computing Symbolic Steady States of Boolean Networks},
booktitle = {Cellular Automata - 11th International Conference on Cellular Automata
for Research and Industry, {ACRI} 2014, Krakow, Poland, September
22-25, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8751},
pages = {561--570},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-11520-7\_59},
doi = {10.1007/978-3-319-11520-7\_59},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/acri/KlarnerBS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acri/StreckS14,
author = {Adam Streck and
Heike Siebert},
editor = {Jaroslaw Was and
Georgios Ch. Sirakoulis and
Stefania Bandini},
title = {Equivalences in Multi-valued Asynchronous Models of Regulatory Networks},
booktitle = {Cellular Automata - 11th International Conference on Cellular Automata
for Research and Industry, {ACRI} 2014, Krakow, Poland, September
22-25, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8751},
pages = {571--575},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-11520-7\_60},
doi = {10.1007/978-3-319-11520-7\_60},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/acri/StreckS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/ThobeSKS14,
author = {Kirsten Thobe and
Adam Streck and
Hannes Klarner and
Heike Siebert},
editor = {Pedro Mendes and
Joseph O. Dada and
Kieran Smallbone},
title = {Model Integration and Crosstalk Analysis of Logical Regulatory Networks},
booktitle = {Computational Methods in Systems Biology - 12th International Conference,
{CMSB} 2014, Manchester, UK, November 17-19, 2014, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8859},
pages = {32--44},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-12982-2\_3},
doi = {10.1007/978-3-319-12982-2\_3},
timestamp = {Sat, 09 Apr 2022 12:36:34 +0200},
biburl = {https://dblp.org/rec/conf/cmsb/ThobeSKS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/JamshidiSB13,
author = {Shahrad Jamshidi and
Heike Siebert and
Alexander Bockmayr},
title = {Preservation of dynamic properties in qualitative modeling frameworks
for gene regulatory networks},
journal = {Biosyst.},
volume = {112},
number = {2},
pages = {171--179},
year = {2013},
url = {https://doi.org/10.1016/j.biosystems.2013.03.001},
doi = {10.1016/J.BIOSYSTEMS.2013.03.001},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biosystems/JamshidiSB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/birthday/BockmayrS13,
author = {Alexander Bockmayr and
Heike Siebert},
editor = {Andrei Voronkov and
Christoph Weidenbach},
title = {Bio-Logics: Logical Analysis of Bioregulatory Networks},
booktitle = {Programming Logics - Essays in Memory of Harald Ganzinger},
series = {Lecture Notes in Computer Science},
volume = {7797},
pages = {19--34},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37651-1\_2},
doi = {10.1007/978-3-642-37651-1\_2},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/birthday/BockmayrS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/KlarnerSB12,
author = {Hannes Klarner and
Heike Siebert and
Alexander Bockmayr},
title = {Time Series Dependent Analysis of Unparametrized Thomas Networks},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {9},
number = {5},
pages = {1338--1351},
year = {2012},
url = {https://doi.org/10.1109/TCBB.2012.61},
doi = {10.1109/TCBB.2012.61},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/KlarnerSB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/KlarnerSSKS12,
author = {Hannes Klarner and
Adam Streck and
David Safr{\'{a}}nek and
Juraj Kolc{\'{a}}k and
Heike Siebert},
editor = {David R. Gilbert and
Monika Heiner},
title = {Parameter Identification and Model Ranking of Thomas Networks},
booktitle = {Computational Methods in Systems Biology - 10th International Conference,
{CMSB} 2012, London, UK, October 3-5, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7605},
pages = {207--226},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-33636-2\_13},
doi = {10.1007/978-3-642-33636-2\_13},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cmsb/KlarnerSSKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipcat/JamshidiSB12,
author = {Shahrad Jamshidi and
Heike Siebert and
Alexander Bockmayr},
editor = {Michael A. Lones and
Stephen L. Smith and
Sarah A. Teichmann and
Felix Naef and
James Alfred Walker and
Martin Trefzer},
title = {Comparing Discrete and Piecewise Affine Differential Equation Models
of Gene Regulatory Networks},
booktitle = {Information Processign in Cells and Tissues - 9th International Conference,
{IPCAT} 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7223},
pages = {17--24},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-28792-3\_3},
doi = {10.1007/978-3-642-28792-3\_3},
timestamp = {Thu, 23 Jun 2022 19:59:03 +0200},
biburl = {https://dblp.org/rec/conf/ipcat/JamshidiSB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/KlarnerSB11,
author = {Hannes Klarner and
Heike Siebert and
Alexander Bockmayr},
editor = {Fran{\c{c}}ois Fages},
title = {Parameter inference for asynchronous logical networks using discrete
time series},
booktitle = {Computational Methods in Systems Biology, 9th International Conference,
{CMSB} 2011, Paris, France, September 21-23, 2011. Proceedings},
pages = {121--130},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2037509.2037528},
doi = {10.1145/2037509.2037528},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cmsb/KlarnerSB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/TwardziokSH10,
author = {Sven Twardziok and
Heike Siebert and
Alexander Heyl},
editor = {Paola Quaglia},
title = {Stochasticity in reactions: a probabilistic Boolean modeling approach},
booktitle = {Computational Methods in Systems Biology, 8th International Conference,
{CMSB} 2010, Trento, Italy, September 29 - October 1, 2010. Proceedings},
pages = {76--85},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1839764.1839774},
doi = {10.1145/1839764.1839774},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cmsb/TwardziokSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mics/Siebert09,
author = {Heike Siebert},
title = {Deriving Behavior of Boolean Bioregulatory Networks from Subnetwork
Dynamics},
journal = {Math. Comput. Sci.},
volume = {2},
number = {3},
pages = {421--442},
year = {2009},
url = {https://doi.org/10.1007/s11786-008-0064-4},
doi = {10.1007/S11786-008-0064-4},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mics/Siebert09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/corr/abs-0910-1412,
author = {Heike Siebert},
editor = {Ralph{-}Johan Back and
Ion Petre and
Erik P. de Vink},
title = {Dynamical and Structural Modularity of Discrete Regulatory Networks},
booktitle = {Proceedings Second International Workshop on Computational Models
for Cell Processes, {COMPMOD} 2009, Eindhoven, the Netherlands, November
3, 2009},
series = {{EPTCS}},
volume = {6},
pages = {109--124},
year = {2009},
url = {https://doi.org/10.4204/EPTCS.6.8},
doi = {10.4204/EPTCS.6.8},
timestamp = {Mon, 15 Jun 2020 16:54:36 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0910-1412.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/Csikasz-NagyFLL09,
author = {Attila Csik{\'{a}}sz{-}Nagy and
Adrien Faur{\'{e}} and
Roberto Larcher and
Paola Lecca and
Ivan Mura and
Ferenc Jord{\'{a}}n and
Alida Palmisano and
Alessandro Romanel and
Sean Sedwards and
Heike Siebert and
Sylvain Soliman and
Denis Thieffry and
Judit Z{\'{a}}mborszky and
Tommaso Mazza and
Paolo Ballarini},
editor = {Rainer Breitling and
David Roger Gilbert and
Monika Heiner and
Corrado Priami},
title = {Analyzing various models of Circadian Clock and Cell Cycle coupling},
booktitle = {Formal Methods in Molecular Biology, 22.02. - 27.02.2009},
series = {Dagstuhl Seminar Proceedings},
volume = {09091},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik, Germany},
year = {2009},
url = {http://drops.dagstuhl.de/opus/volltexte/2009/1994/},
timestamp = {Thu, 10 Jun 2021 13:02:05 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/Csikasz-NagyFLL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/Siebert09,
author = {Heike Siebert},
editor = {Rainer Breitling and
David Roger Gilbert and
Monika Heiner and
Corrado Priami},
title = {Symbolic Steady States and Dynamically Essential Subnetworks of Discrete
Regulatory Networks},
booktitle = {Formal Methods in Molecular Biology, 22.02. - 27.02.2009},
series = {Dagstuhl Seminar Proceedings},
volume = {09091},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik, Germany},
year = {2009},
url = {http://drops.dagstuhl.de/opus/volltexte/2009/1995/},
timestamp = {Thu, 23 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/Siebert09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/SiebertB08,
author = {Heike Siebert and
Alexander Bockmayr},
title = {Temporal constraints in the logical analysis of regulatory networks},
journal = {Theor. Comput. Sci.},
volume = {391},
number = {3},
pages = {258--275},
year = {2008},
url = {https://doi.org/10.1016/j.tcs.2007.11.010},
doi = {10.1016/J.TCS.2007.11.010},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/SiebertB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ab/Siebert08,
author = {Heike Siebert},
editor = {Katsuhisa Horimoto and
Georg Regensburger and
Markus Rosenkranz and
Hiroshi Yoshida},
title = {Local Structure and Behavior of Boolean Bioregulatory Networks},
booktitle = {Algebraic Biology, Third International Conference, {AB} 2008, Castle
of Hagenberg, Austria, July 31-August 2, 2008, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5147},
pages = {185--199},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-85101-1\_14},
doi = {10.1007/978-3-540-85101-1\_14},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/ab/Siebert08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ab/SiebertB07,
author = {Heike Siebert and
Alexander Bockmayr},
editor = {Hirokazu Anai and
Katsuhisa Horimoto and
Temur Kutsia},
title = {Relating Attractors and Singular Steady States in the Logical Analysis
of Bioregulatory Networks},
booktitle = {Algebraic Biology, Second International Conference, {AB} 2007, Castle
of Hagenberg, Austria, July 2-4, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4545},
pages = {36--50},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73433-8\_4},
doi = {10.1007/978-3-540-73433-8\_4},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/ab/SiebertB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/SiebertB07,
author = {Heike Siebert and
Alexander Bockmayr},
editor = {Muffy Calder and
Stephen Gilmore},
title = {Context Sensitivity in Logical Modeling with Time Delays},
booktitle = {Computational Methods in Systems Biology, International Conference,
{CMSB} 2007, Edinburgh, Scotland, September 20-21, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4695},
pages = {64--79},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-75140-3\_5},
doi = {10.1007/978-3-540-75140-3\_5},
timestamp = {Tue, 14 May 2019 10:00:49 +0200},
biburl = {https://dblp.org/rec/conf/cmsb/SiebertB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/SiebertB06,
author = {Heike Siebert and
Alexander Bockmayr},
editor = {Corrado Priami},
title = {Incorporating Time Delays into the Logical Analysis of Gene Regulatory
Networks},
booktitle = {Computational Methods in Systems Biology, International Conference,
{CMSB} 2006, Trento, Italy, October 18-19, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4210},
pages = {169--183},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11885191\_12},
doi = {10.1007/11885191\_12},
timestamp = {Tue, 14 May 2019 10:00:49 +0200},
biburl = {https://dblp.org/rec/conf/cmsb/SiebertB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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