BibTeX records: Elijah Roberts

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@article{DBLP:journals/bmcbi/ShachafRCX23,
  author       = {Lior I. Shachaf and
                  Elijah Roberts and
                  Patrick Cahan and
                  Jie Xiao},
  title        = {Gene regulation network inference using k-nearest neighbor-based mutual
                  information estimation: revisiting an old {DREAM}},
  journal      = {{BMC} Bioinform.},
  volume       = {24},
  number       = {1},
  pages        = {84},
  year         = {2023},
  url          = {https://doi.org/10.1186/s12859-022-05047-5},
  doi          = {10.1186/S12859-022-05047-5},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ShachafRCX23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/GengBYHSLXR22,
  author       = {Yuncong Geng and
                  Christopher Herrick Bohrer and
                  Nicol{\'{a}}s Yehya and
                  Hunter Hendrix and
                  Lior I. Shachaf and
                  Jian Liu and
                  Jie Xiao and
                  Elijah Roberts},
  title        = {A spatially resolved stochastic model reveals the role of supercoiling
                  in transcription regulation},
  journal      = {PLoS Comput. Biol.},
  volume       = {18},
  number       = {9},
  pages        = {1009788},
  year         = {2022},
  url          = {https://doi.org/10.1371/journal.pcbi.1009788},
  doi          = {10.1371/JOURNAL.PCBI.1009788},
  timestamp    = {Wed, 17 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/GengBYHSLXR22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/EldredAJR20,
  author       = {Kiara C. Eldred and
                  Cameron M. Avelis and
                  Robert J. Johnston Jr and
                  Elijah Roberts},
  title        = {Modeling binary and graded cone cell fate patterning in the mouse
                  retina},
  journal      = {PLoS Comput. Biol.},
  volume       = {16},
  number       = {3},
  year         = {2020},
  url          = {https://doi.org/10.1371/journal.pcbi.1007691},
  doi          = {10.1371/JOURNAL.PCBI.1007691},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/EldredAJR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/KleinSBAR17,
  author       = {Max Klein and
                  Rati Sharma and
                  Christopher Herrick Bohrer and
                  Cameron M. Avelis and
                  Elijah Roberts},
  title        = {Biospark: scalable analysis of large numerical datasets from biological
                  simulations and experiments using Hadoop and Spark},
  journal      = {Bioinform.},
  volume       = {33},
  number       = {2},
  pages        = {303--305},
  year         = {2017},
  url          = {https://doi.org/10.1093/bioinformatics/btw614},
  doi          = {10.1093/BIOINFORMATICS/BTW614},
  timestamp    = {Fri, 08 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KleinSBAR17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/pc/HallockSRFL14,
  author       = {Michael J. Hallock and
                  John E. Stone and
                  Elijah Roberts and
                  Corey Fry and
                  Zaida Luthey{-}Schulten},
  title        = {Simulation of reaction diffusion processes over biologically relevant
                  size and time scales using multi-GPU workstations},
  journal      = {Parallel Comput.},
  volume       = {40},
  number       = {5-6},
  pages        = {86--99},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.parco.2014.03.009},
  doi          = {10.1016/J.PARCO.2014.03.009},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/pc/HallockSRFL14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jcc/RobertsSL13,
  author       = {Elijah Roberts and
                  John E. Stone and
                  Zaida Luthey{-}Schulten},
  title        = {Lattice microbes: High-performance stochastic simulation method for
                  the reaction-diffusion master equation},
  journal      = {J. Comput. Chem.},
  volume       = {34},
  number       = {3},
  pages        = {245--255},
  year         = {2013},
  url          = {https://doi.org/10.1002/jcc.23130},
  doi          = {10.1002/JCC.23130},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcc/RobertsSL13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/RobertsMOBL11,
  author       = {Elijah Roberts and
                  Andrew T. Magis and
                  Julio O. Ortiz and
                  Wolfgang Baumeister and
                  Zaida Luthey{-}Schulten},
  title        = {Noise Contributions in an Inducible Genetic Switch: {A} Whole-Cell
                  Simulation Study},
  journal      = {PLoS Comput. Biol.},
  volume       = {7},
  number       = {3},
  year         = {2011},
  url          = {https://doi.org/10.1371/journal.pcbi.1002010},
  doi          = {10.1371/JOURNAL.PCBI.1002010},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/RobertsMOBL11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/ipps/RobertsSSHL09,
  author       = {Elijah Roberts and
                  John E. Stone and
                  Leonardo Sepulveda and
                  Wen{-}mei W. Hwu and
                  Zaida Luthey{-}Schulten},
  title        = {Long time-scale simulations of in vivo diffusion using {GPU} hardware},
  booktitle    = {23rd {IEEE} International Symposium on Parallel and Distributed Processing,
                  {IPDPS} 2009, Rome, Italy, May 23-29, 2009},
  pages        = {1--8},
  publisher    = {{IEEE}},
  year         = {2009},
  url          = {https://doi.org/10.1109/IPDPS.2009.5160930},
  doi          = {10.1109/IPDPS.2009.5160930},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ipps/RobertsSSHL09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/RobertsEWL06,
  author       = {Elijah Roberts and
                  John Eargle and
                  Dan Wright and
                  Zaida Luthey{-}Schulten},
  title        = {MultiSeq: unifying sequence and structure data for evolutionary analysis},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {382},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-382},
  doi          = {10.1186/1471-2105-7-382},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/RobertsEWL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}