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BibTeX records: Nicole Radde
@article{DBLP:journals/bioinformatics/WagnerR23, author = {Vincent Wagner and Nicole Radde}, title = {The impossible challenge of estimating non-existent moments of the Chemical Master Equation}, journal = {Bioinform.}, volume = {39}, number = {Supplement-1}, pages = {440--447}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad205}, doi = {10.1093/BIOINFORMATICS/BTAD205}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/WagnerR23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WagnerCOR22, author = {Vincent Wagner and Benjamin Castellaz and Marco Oesting and Nicole Radde}, title = {Quasi-Entropy Closure: a fast and reliable approach to close the moment equations of the Chemical Master Equation}, journal = {Bioinform.}, volume = {38}, number = {18}, pages = {4352--4359}, year = {2022}, url = {https://doi.org/10.1093/bioinformatics/btac501}, doi = {10.1093/BIOINFORMATICS/BTAC501}, timestamp = {Tue, 18 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WagnerCOR22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/JenschTR17, author = {Antje Jensch and Caterina Thomaseth and Nicole Radde}, title = {Sampling-based Bayesian approaches reveal the importance of quasi-bistable behavior in cellular decision processes on the example of the {MAPK} signaling pathway in {PC-12} cell lines}, journal = {{BMC} Syst. Biol.}, volume = {11}, number = {1}, pages = {11:1--11:15}, year = {2017}, url = {https://doi.org/10.1186/s12918-017-0392-6}, doi = {10.1186/S12918-017-0392-6}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/JenschTR17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GeissenHHHTR16, author = {Eva{-}Maria Geissen and Jan Hasenauer and Stephanie Heinrich and Silke Hauf and Fabian J. Theis and Nicole Radde}, title = {{MEMO:} multi-experiment mixture model analysis of censored data}, journal = {Bioinform.}, volume = {32}, number = {16}, pages = {2464--2472}, year = {2016}, url = {https://doi.org/10.1093/bioinformatics/btw190}, doi = {10.1093/BIOINFORMATICS/BTW190}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GeissenHHHTR16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/WeberHOHR15, author = {Patrick Weber and Mariana Hornjik and Monilola A. Olayioye and Angelika Hausser and Nicole Radde}, title = {A computational model of {PKD} and {CERT} interactions at the trans-Golgi network of mammalian cells}, journal = {{BMC} Syst. Biol.}, volume = {9}, pages = {9}, year = {2015}, url = {https://doi.org/10.1186/s12918-015-0147-1}, doi = {10.1186/S12918-015-0147-1}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/WeberHOHR15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KramerSGR14, author = {Andrei Kramer and Vassilios Stathopoulos and Mark A. Girolami and Nicole Radde}, title = {mcmc{\_}clib-an advanced {MCMC} sampling package for ode models}, journal = {Bioinform.}, volume = {30}, number = {20}, pages = {2991--2992}, year = {2014}, url = {https://doi.org/10.1093/bioinformatics/btu429}, doi = {10.1093/BIOINFORMATICS/BTU429}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/KramerSGR14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KramerCR14, author = {Andrei Kramer and Ben Calderhead and Nicole Radde}, title = {Hamiltonian Monte Carlo methods for efficient parameter estimation in steady state dynamical systems}, journal = {{BMC} Bioinform.}, volume = {15}, pages = {253}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-253}, doi = {10.1186/1471-2105-15-253}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/KramerCR14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/VehlowHKRHTRTW13, author = {Corinna Vehlow and Jan Hasenauer and Andrei Kramer and Andreas Raue and Sabine Hug and Jens Timmer and Nicole Radde and Fabian J. Theis and Daniel Weiskopf}, title = {iVUN: interactive Visualization of Uncertain biochemical reaction Networks}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-19}}, pages = {S2}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S19-S2}, doi = {10.1186/1471-2105-14-S19-S2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/VehlowHKRHTRTW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WeberKDR12, author = {Patrick Weber and Andrei Kramer and Clemens Dingler and Nicole Radde}, title = {Trajectory-oriented Bayesian experiment design versus Fisher A-optimal design: an in depth comparison study}, journal = {Bioinform.}, volume = {28}, number = {18}, pages = {535--541}, year = {2012}, url = {https://doi.org/10.1093/bioinformatics/bts377}, doi = {10.1093/BIOINFORMATICS/BTS377}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WeberKDR12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/Radde12, author = {Nicole Radde}, title = {Analyzing fixed points of intracellular regulation networks with interrelated feedback topology}, journal = {{BMC} Syst. Biol.}, volume = {6}, pages = {57}, year = {2012}, url = {https://doi.org/10.1186/1752-0509-6-57}, doi = {10.1186/1752-0509-6-57}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/Radde12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biovis/VehlowHKHRAW12, author = {Corinna Vehlow and Jan Hasenauer and Andrei Kramer and Julian Heinrich and Nicole Radde and Frank Allg{\"{o}}wer and Daniel Weiskopf}, title = {Uncertainty-aware visual analysis of biochemical reaction networks}, booktitle = {2012 {IEEE} Symposium on Biological Data Visualization, BioVis 2011, Seattle, WA, USA, October 14-15, 2012}, pages = {91--98}, publisher = {{IEEE} Computer Society}, year = {2012}, url = {https://doi.org/10.1109/BioVis.2012.6378598}, doi = {10.1109/BIOVIS.2012.6378598}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biovis/VehlowHKHRAW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HasenauerWDRSA11, author = {Jan Hasenauer and Steffen Waldherr and Malgorzata Doszczak and Nicole Radde and Peter Scheurich and Frank Allg{\"{o}}wer}, title = {Identification of models of heterogeneous cell populations from population snapshot data}, journal = {{BMC} Bioinform.}, volume = {12}, pages = {125}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-125}, doi = {10.1186/1471-2105-12-125}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HasenauerWDRSA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/Radde10, author = {Nicole Radde}, title = {Fixed point characterization of biological networks with complex graph topology}, journal = {Bioinform.}, volume = {26}, number = {22}, pages = {2874--2880}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btq517}, doi = {10.1093/BIOINFORMATICS/BTQ517}, timestamp = {Sun, 08 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/Radde10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijsysc/RaddeBB10, author = {Nicole Radde and Nadav S. Bar and Murad Banaji}, title = {Graphical methods for analysing feedback in biological networks - {A} survey}, journal = {Int. J. Syst. Sci.}, volume = {41}, number = {1}, pages = {35--46}, year = {2010}, url = {https://doi.org/10.1080/00207720903151326}, doi = {10.1080/00207720903151326}, timestamp = {Wed, 22 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijsysc/RaddeBB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/IEEEcca/WaldherrAR10, author = {Steffen Waldherr and Frank Allg{\"{o}}wer and Nicole Radde}, title = {Generic Bifurcations in the Dynamics of Biochemical Networks}, booktitle = {Proceedings of the {IEEE} International Conference on Control Applications, {CCA} 2010, Yokohama, Japan, September 8-10, 2010}, pages = {135--141}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/CCA.2010.5611139}, doi = {10.1109/CCA.2010.5611139}, timestamp = {Wed, 16 Oct 2019 14:14:51 +0200}, biburl = {https://dblp.org/rec/conf/IEEEcca/WaldherrAR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/IEEEcca/KramerHAR10, author = {Andrei Kramer and Jan Hasenauer and Frank Allg{\"{o}}wer and Nicole Radde}, title = {Computation of the Posterior Entropy in a Bayesian Framework for Parameter Estimation in Biological Networks}, booktitle = {Proceedings of the {IEEE} International Conference on Control Applications, {CCA} 2010, Yokohama, Japan, September 8-10, 2010}, pages = {493--498}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/CCA.2010.5611198}, doi = {10.1109/CCA.2010.5611198}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/IEEEcca/KramerHAR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:journals/procedia/KramerR10, author = {Andrei Kramer and Nicole Radde}, editor = {Peter M. A. Sloot and G. Dick van Albada and Jack J. Dongarra}, title = {Towards experimental design using a Bayesian framework for parameter identification in dynamic intracellular network models}, booktitle = {Proceedings of the International Conference on Computational Science, {ICCS} 2010, University of Amsterdam, The Netherlands, May 31 - June 2, 2010}, series = {Procedia Computer Science}, volume = {1}, number = {1}, pages = {1645--1653}, publisher = {Elsevier}, year = {2010}, url = {https://doi.org/10.1016/j.procs.2010.04.184}, doi = {10.1016/J.PROCS.2010.04.184}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/procedia/KramerR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:journals/procedia/HasenauerWRDSA10, author = {Jan Hasenauer and Steffen Waldherr and Nicole Radde and Malgorzata Doszczak and Peter Scheurich and Frank Allg{\"{o}}wer}, editor = {Peter M. A. Sloot and G. Dick van Albada and Jack J. Dongarra}, title = {A maximum likelihood estimator for parameter distributions in heterogeneous cell populations}, booktitle = {Proceedings of the International Conference on Computational Science, {ICCS} 2010, University of Amsterdam, The Netherlands, May 31 - June 2, 2010}, series = {Procedia Computer Science}, volume = {1}, number = {1}, pages = {1655--1663}, publisher = {Elsevier}, year = {2010}, url = {https://doi.org/10.1016/j.procs.2010.04.185}, doi = {10.1016/J.PROCS.2010.04.185}, timestamp = {Wed, 27 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/procedia/HasenauerWRDSA10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/BarR09, author = {Nadav S. Bar and Nicole Radde}, title = {Long-term prediction of fish growth under varying ambient temperature using a multiscale dynamic model}, journal = {{BMC} Syst. Biol.}, volume = {3}, pages = {107}, year = {2009}, url = {https://doi.org/10.1186/1752-0509-3-107}, doi = {10.1186/1752-0509-3-107}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/BarR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/dam/GebertRFSB09, author = {Jutta Gebert and Nicole Radde and Ulrich Faigle and Julia Str{\"{o}}sser and Andreas Burkovski}, title = {Modeling and simulation of nitrogen regulation in Corynebacterium glutamicum}, journal = {Discret. Appl. Math.}, volume = {157}, number = {10}, pages = {2232--2243}, year = {2009}, url = {https://doi.org/10.1016/j.dam.2008.06.055}, doi = {10.1016/J.DAM.2008.06.055}, timestamp = {Thu, 11 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/dam/GebertRFSB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/dam/RaddeK09, author = {Nicole Radde and Lars Kaderali}, title = {Inference of an oscillating model for the yeast cell cycle}, journal = {Discret. Appl. Math.}, volume = {157}, number = {10}, pages = {2285--2295}, year = {2009}, url = {https://doi.org/10.1016/j.dam.2008.06.036}, doi = {10.1016/J.DAM.2008.06.036}, timestamp = {Thu, 11 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/dam/RaddeK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ejbsb/Radde09, author = {Nicole Radde}, title = {The Impact of Time Delays on the Robustness of Biological Oscillators and the Effect of Bifurcations on the Inverse Problem}, journal = {{EURASIP} J. Bioinform. Syst. Biol.}, volume = {2009}, year = {2009}, url = {https://doi.org/10.1155/2009/327503}, doi = {10.1155/2009/327503}, timestamp = {Thu, 18 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ejbsb/Radde09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/advcs/Radde08, author = {Nicole Radde}, title = {The Effect of Time Scale Differences and Time Delays on the Structural Stability of oscillations in a Two-Gene Network}, journal = {Adv. Complex Syst.}, volume = {11}, number = {3}, pages = {471--483}, year = {2008}, url = {https://doi.org/10.1142/S0219525908001751}, doi = {10.1142/S0219525908001751}, timestamp = {Thu, 08 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/advcs/Radde08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/sci/KaderaliR08, author = {Lars Kaderali and Nicole Radde}, editor = {Arpad Kelemen and Ajith Abraham and Yuehui Chen}, title = {Inferring Gene Regulatory Networks from Expression Data}, booktitle = {Computational Intelligence in Bioinformatics}, series = {Studies in Computational Intelligence}, volume = {94}, pages = {33--74}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-76803-6\_2}, doi = {10.1007/978-3-540-76803-6\_2}, timestamp = {Wed, 14 Aug 2019 15:22:25 +0200}, biburl = {https://dblp.org/rec/series/sci/KaderaliR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@phdthesis{DBLP:phd/basesearch/Radde07, author = {Nicole Radde}, title = {Modeling Non-Linear Dynamic Phenomena in Biochemical Networks}, school = {University of Cologne, Germany}, year = {2007}, url = {https://kups.ub.uni-koeln.de/2221/}, timestamp = {Wed, 13 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/phd/basesearch/Radde07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/eor/GebertRW07, author = {Jutta Gebert and Nicole Radde and Gerhard{-}Wilhelm Weber}, title = {Modeling gene regulatory networks with piecewise linear differential equations}, journal = {Eur. J. Oper. Res.}, volume = {181}, number = {3}, pages = {1148--1165}, year = {2007}, url = {https://doi.org/10.1016/j.ejor.2005.11.044}, doi = {10.1016/J.EJOR.2005.11.044}, timestamp = {Fri, 21 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/eor/GebertRW07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bird/RaddeK07, author = {Nicole Radde and Lars Kaderali}, editor = {Sepp Hochreiter and Roland Wagner}, title = {Bayesian Inference of Gene Regulatory Networks Using Gene Expression Time Series Data}, booktitle = {Bioinformatics Research and Development, First International Conference, {BIRD} 2007, Berlin, Germany, March 12-14, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4414}, pages = {1--15}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-71233-6\_1}, doi = {10.1007/978-3-540-71233-6\_1}, timestamp = {Tue, 14 May 2019 10:00:53 +0200}, biburl = {https://dblp.org/rec/conf/bird/RaddeK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RaddeGF06, author = {Nicole Radde and Jutta Gebert and Christian V. Forst}, title = {Systematic component selection for gene-network refinement}, journal = {Bioinform.}, volume = {22}, number = {21}, pages = {2674--2680}, year = {2006}, url = {https://doi.org/10.1093/bioinformatics/btl440}, doi = {10.1093/BIOINFORMATICS/BTL440}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/RaddeGF06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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