BibTeX records: Stephen G. Oliver

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@article{DBLP:journals/cce/GangadharanSTFC21,
  author       = {Nishanthi Gangadharan and
                  David Sewell and
                  Richard Turner and
                  Ray Field and
                  Matthew Cheeks and
                  Stephen G. Oliver and
                  Nigel K. H. Slater and
                  Duygu Dikicioglu},
  title        = {Data intelligence for process performance prediction in biologics
                  manufacturing},
  journal      = {Comput. Chem. Eng.},
  volume       = {146},
  pages        = {107226},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.compchemeng.2021.107226},
  doi          = {10.1016/J.COMPCHEMENG.2021.107226},
  timestamp    = {Tue, 02 Mar 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cce/GangadharanSTFC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CarbonDGUHMBCDH21,
  author       = {Seth Carbon and
                  Eric Douglass and
                  Benjamin M. Good and
                  Deepak R. Unni and
                  Nomi L. Harris and
                  Christopher J. Mungall and
                  Siddartha Basu and
                  Rex L. Chisholm and
                  Robert J. Dodson and
                  Eric Hartline and
                  Petra Fey and
                  Paul D. Thomas and
                  Laurent{-}Philippe Albou and
                  Dustin Ebert and
                  Michael J. Kesling and
                  Huaiyu Mi and
                  Anushya Muruganujan and
                  Xiaosong Huang and
                  Tremayne Mushayahama and
                  Sandra A. LaBonte and
                  Deborah A. Siegele and
                  Giulia Antonazzo and
                  Helen Attrill and
                  Nick H. Brown and
                  Phani V. Garapati and
                  Steven J. Marygold and
                  Vitor Trovisco and
                  Gilberto dos Santos and
                  Kathleen Falls and
                  Christopher J. Tabone and
                  Pinglei Zhou and
                  Joshua L. Goodman and
                  Victor B. Strelets and
                  Jim Thurmond and
                  Penelope Garmiri and
                  Rizwan Ishtiaq and
                  Milagros Rodr{\'{\i}}guez{-}L{\'{o}}pez and
                  Marcio Luis Acencio and
                  Martin Kuiper and
                  Astrid L{\ae}greid and
                  Colin Logie and
                  Ruth C. Lovering and
                  Barbara Kramarz and
                  Shirin C. C. Saverimuttu and
                  Sandra M. Pinheiro and
                  Heather Gunn and
                  Renzhi Su and
                  Katherine E. Thurlow and
                  Marcus C. Chibucos and
                  Michelle G. Giglio and
                  Suvarna Nadendla and
                  James B. Munro and
                  Rebecca C. Jackson and
                  Margaret J. Duesbury and
                  Noemi del{-}Toro and
                  Birgit H. M. Meldal and
                  Kalpana Paneerselvam and
                  Livia Perfetto and
                  Pablo Porras and
                  Sandra E. Orchard and
                  Anjali Shrivastava and
                  Hsin{-}Yu Chang and
                  Robert D. Finn and
                  Alex L. Mitchell and
                  Neil D. Rawlings and
                  Lorna J. Richardson and
                  Amaia Sangrador{-}Vegas and
                  Judith A. Blake and
                  Karen R. Christie and
                  Mary E. Dolan and
                  Harold J. Drabkin and
                  David P. Hill and
                  Li Ni and
                  Dmitry M. Sitnikov and
                  Midori A. Harris and
                  Stephen G. Oliver and
                  Kim Rutherford and
                  Valerie Wood and
                  Jaqueline Hayles and
                  J{\"{u}}rg B{\"{a}}hler and
                  Elizabeth R. Bolton and
                  Jeffrey DePons and
                  Melinda R. Dwinell and
                  G. Thomas Hayman and
                  Mary L. Kaldunski and
                  Anne E. Kwitek and
                  Stanley J. F. Laulederkind and
                  Cody Plasterer and
                  Marek Tutaj and
                  Mahima Vedi and
                  Shur{-}Jen Wang and
                  Peter D'Eustachio and
                  Lisa Matthews and
                  James P. Balhoff and
                  Suzi A. Aleksander and
                  Michael J. Alexander and
                  J. Michael Cherry and
                  Stacia R. Engel and
                  Felix Gondwe and
                  Kalpana Karra and
                  Stuart R. Miyasato and
                  Robert S. Nash and
                  Matt Simison and
                  Marek S. Skrzypek and
                  Shuai Weng and
                  Edith D. Wong and
                  Marc Feuermann and
                  Pascale Gaudet and
                  Anne Morgat and
                  Erica Bakker and
                  Tanya Z. Berardini and
                  Leonore Reiser and
                  Shabari Subramaniam and
                  Eva Huala and
                  Cecilia N. Arighi and
                  Andrea H. Auchincloss and
                  Kristian B. Axelsen and
                  Ghislaine Argoud{-}Puy and
                  Alex Bateman and
                  Marie{-}Claude Blatter and
                  Emmanuel Boutet and
                  Emily Bowler and
                  Lionel Breuza and
                  Alan J. Bridge and
                  Ramona Britto and
                  Hema Bye{-}A{-}Jee and
                  Cristina Casals{-}Casas and
                  Elisabeth Coudert and
                  Paul Denny and
                  Anne Estreicher and
                  Maria Livia Famiglietti and
                  George E. Georghiou and
                  Arnaud Gos and
                  Nadine Gruaz{-}Gumowski and
                  Emma Hatton{-}Ellis and
                  Chantal Hulo and
                  Alexandr Ignatchenko and
                  Florence Jungo and
                  Kati Laiho and
                  Philippe Le Mercier and
                  Damien Lieberherr and
                  Antonia Lock and
                  Yvonne Lussi and
                  Alistair MacDougall and
                  Michele Magrane and
                  Maria Jesus Martin and
                  Patrick Masson and
                  Darren A. Natale and
                  Nevila Hyka{-}Nouspikel and
                  Ivo Pedruzzi and
                  Lucille Pourcel and
                  Sylvain Poux and
                  Sangya Pundir and
                  Catherine Rivoire and
                  Elena Speretta and
                  Shyamala Sundaram and
                  Nidhi Tyagi and
                  Kate Warner and
                  Rossana Zaru and
                  Cathy H. Wu and
                  Alexander D. Diehl and
                  Juancarlos Chan and
                  Christian A. Grove and
                  Raymond Y. N. Lee and
                  Hans{-}Michael M{\"{u}}ller and
                  Daniela Raciti and
                  Kimberly Van Auken and
                  Paul W. Sternberg and
                  Matthew Berriman and
                  Michael Paulini and
                  Kevin L. Howe and
                  Sibyl Gao and
                  Adam Wright and
                  Lincoln Stein and
                  Douglas G. Howe and
                  Sabrina Toro and
                  Monte Westerfield and
                  Pankaj Jaiswal and
                  Laurel Cooper and
                  Justin Elser},
  title        = {The Gene Ontology resource: enriching a GOld mine},
  journal      = {Nucleic Acids Res.},
  volume       = {49},
  number       = {Database-Issue},
  pages        = {D325--D334},
  year         = {2021},
  url          = {https://doi.org/10.1093/nar/gkaa1113},
  doi          = {10.1093/NAR/GKAA1113},
  timestamp    = {Fri, 15 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/CarbonDGUHMBCDH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cdc/JulvezO21,
  author       = {Jorge J{\'{u}}lvez and
                  Stephen G. Oliver},
  title        = {Extending the Modeling and Analysis Capabilities of Continuous Petri
                  Nets by Flexible Nets},
  booktitle    = {2021 60th {IEEE} Conference on Decision and Control (CDC), Austin,
                  TX, USA, December 14-17, 2021},
  pages        = {1750--1756},
  publisher    = {{IEEE}},
  year         = {2021},
  url          = {https://doi.org/10.1109/CDC45484.2021.9682874},
  doi          = {10.1109/CDC45484.2021.9682874},
  timestamp    = {Tue, 17 May 2022 15:53:17 +0200},
  biburl       = {https://dblp.org/rec/conf/cdc/JulvezO21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tac/JulvezO20,
  author       = {Jorge J{\'{u}}lvez and
                  Stephen G. Oliver},
  title        = {Steady State Analysis of Flexible Nets},
  journal      = {{IEEE} Trans. Autom. Control.},
  volume       = {65},
  number       = {6},
  pages        = {2510--2525},
  year         = {2020},
  url          = {https://doi.org/10.1109/TAC.2019.2931836},
  doi          = {10.1109/TAC.2019.2931836},
  timestamp    = {Tue, 16 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tac/JulvezO20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmsb/JulvezO20,
  author       = {Jorge J{\'{u}}lvez and
                  Stephen G. Oliver},
  editor       = {Alessandro Abate and
                  Tatjana Petrov and
                  Verena Wolf},
  title        = {fnyzer: {A} Python Package for the Analysis of Flexible Nets},
  booktitle    = {Computational Methods in Systems Biology - 18th International Conference,
                  {CMSB} 2020, Konstanz, Germany, September 23-25, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12314},
  pages        = {349--355},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-60327-4\_19},
  doi          = {10.1007/978-3-030-60327-4\_19},
  timestamp    = {Wed, 07 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cmsb/JulvezO20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/deds/JulvezO19,
  author       = {Jorge J{\'{u}}lvez and
                  Stephen G. Oliver},
  title        = {Flexible Nets: a modeling formalism for dynamic systems with uncertain
                  parameters},
  journal      = {Discret. Event Dyn. Syst.},
  volume       = {29},
  number       = {3},
  pages        = {367--392},
  year         = {2019},
  url          = {https://doi.org/10.1007/s10626-019-00287-9},
  doi          = {10.1007/S10626-019-00287-9},
  timestamp    = {Mon, 08 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/deds/JulvezO19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LockRHHOBW19,
  author       = {Antonia Lock and
                  Kim Rutherford and
                  Midori A. Harris and
                  Jacqueline Hayles and
                  Stephen G. Oliver and
                  J{\"{u}}rg B{\"{a}}hler and
                  Valerie Wood},
  title        = {PomBase 2018: user-driven reimplementation of the fission yeast database
                  provides rapid and intuitive access to diverse, interconnected information},
  journal      = {Nucleic Acids Res.},
  volume       = {47},
  number       = {Database-Issue},
  pages        = {D821--D827},
  year         = {2019},
  url          = {https://doi.org/10.1093/nar/gky961},
  doi          = {10.1093/NAR/GKY961},
  timestamp    = {Tue, 16 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LockRHHOBW19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/TronnoloneGSJOB18,
  author       = {Hayden Tronnolone and
                  Jennifer M. Gardner and
                  Joanna F. Sundstrom and
                  Vladimir Jiranek and
                  Stephen G. Oliver and
                  Benjamin J. Binder},
  title        = {TAMMiCol: Tool for analysis of the morphology of microbial colonies},
  journal      = {PLoS Comput. Biol.},
  volume       = {14},
  number       = {12},
  year         = {2018},
  url          = {https://doi.org/10.1371/journal.pcbi.1006629},
  doi          = {10.1371/JOURNAL.PCBI.1006629},
  timestamp    = {Tue, 01 Dec 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ploscb/TronnoloneGSJOB18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FidanerCDKCO16,
  author       = {Isik Baris Fidaner and
                  Ayca Cankorur{-}Cetinkaya and
                  Duygu Dikicioglu and
                  Bet{\"{u}}l Kirdar and
                  Ali Taylan Cemgil and
                  Stephen G. Oliver},
  title        = {CLUSTERnGO: a user-defined modelling platform for two-stage clustering
                  of time-series data},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {3},
  pages        = {388--397},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btv532},
  doi          = {10.1093/BIOINFORMATICS/BTV532},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/FidanerCDKCO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/McDowallHLRSBKOW15,
  author       = {Mark D. McDowall and
                  Midori A. Harris and
                  Antonia Lock and
                  Kim Rutherford and
                  Daniel M. Staines and
                  J{\"{u}}rg B{\"{a}}hler and
                  Paul J. Kersey and
                  Stephen G. Oliver and
                  Valerie Wood},
  title        = {PomBase 2015: updates to the fission yeast database},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {656--661},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gku1040},
  doi          = {10.1093/NAR/GKU1040},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/McDowallHLRSBKOW15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BinderSGJO15,
  author       = {Benjamin J. Binder and
                  Joanna F. Sundstrom and
                  Jennifer M. Gardner and
                  Vladimir Jiranek and
                  Stephen G. Oliver},
  title        = {Quantifying Two-Dimensional Filamentous and Invasive Growth Spatial
                  Patterns in Yeast Colonies},
  journal      = {PLoS Comput. Biol.},
  volume       = {11},
  number       = {2},
  year         = {2015},
  url          = {https://doi.org/10.1371/journal.pcbi.1004070},
  doi          = {10.1371/JOURNAL.PCBI.1004070},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BinderSGJO15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibb/VlastaridisOPA15,
  author       = {Panayotis Vlastaridis and
                  Stephen G. Oliver and
                  Yves Van de Peer and
                  Grigoris D. Amoutzias},
  editor       = {Claudia Angelini and
                  Paola M. V. Rancoita and
                  Stefano Rovetta},
  title        = {The Challenges of Interpreting Phosphoproteomics Data: {A} Critical
                  View Through the Bioinformatics Lens},
  booktitle    = {Computational Intelligence Methods for Bioinformatics and Biostatistics
                  - 12th International Meeting, {CIBB} 2015, Naples, Italy, September
                  10-12, 2015, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {9874},
  pages        = {196--204},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-44332-4\_15},
  doi          = {10.1007/978-3-319-44332-4\_15},
  timestamp    = {Tue, 14 May 2019 10:00:54 +0200},
  biburl       = {https://dblp.org/rec/conf/cibb/VlastaridisOPA15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RutherfordHLOW14,
  author       = {Kim M. Rutherford and
                  Midori A. Harris and
                  Antonia Lock and
                  Stephen G. Oliver and
                  Valerie Wood},
  title        = {Canto: an online tool for community literature curation},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {12},
  pages        = {1791--1792},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btu103},
  doi          = {10.1093/BIOINFORMATICS/BTU103},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/RutherfordHLOW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarrisLBOW13,
  author       = {Midori A. Harris and
                  Antonia Lock and
                  J{\"{u}}rg B{\"{a}}hler and
                  Stephen G. Oliver and
                  Valerie Wood},
  title        = {{FYPO:} the fission yeast phenotype ontology},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {13},
  pages        = {1671--1678},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/btt266},
  doi          = {10.1093/BIOINFORMATICS/BTT266},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/HarrisLBOW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PirGWRKZO12,
  author       = {Pinar Pir and
                  Alex Gutteridge and
                  Jian Wu and
                  Bharat Rash and
                  Douglas B. Kell and
                  Nianshu Zhang and
                  Stephen G. Oliver},
  title        = {The genetic control of growth rate: a systems biology study in yeast},
  journal      = {{BMC} Syst. Biol.},
  volume       = {6},
  pages        = {4},
  year         = {2012},
  url          = {https://doi.org/10.1186/1752-0509-6-4},
  doi          = {10.1186/1752-0509-6-4},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/PirGWRKZO12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WoodHMRVSALBKO12,
  author       = {Valerie Wood and
                  Midori A. Harris and
                  Mark D. McDowall and
                  Kim Rutherford and
                  Brendan W. Vaughan and
                  Daniel M. Staines and
                  Martin Aslett and
                  Antonia Lock and
                  J{\"{u}}rg B{\"{a}}hler and
                  Paul J. Kersey and
                  Stephen G. Oliver},
  title        = {PomBase: a comprehensive online resource for fission yeast},
  journal      = {Nucleic Acids Res.},
  volume       = {40},
  number       = {Database-Issue},
  pages        = {695--699},
  year         = {2012},
  url          = {https://doi.org/10.1093/nar/gkr853},
  doi          = {10.1093/NAR/GKR853},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/WoodHMRVSALBKO12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BonzanniZOF11,
  author       = {Nicola Bonzanni and
                  Nianshu Zhang and
                  Stephen G. Oliver and
                  Jasmin Fisher},
  title        = {The role of proteosome-mediated proteolysis in modulating potentially
                  harmful transcription factor activity in \emph{Saccharomyces cerevisiae}},
  journal      = {Bioinform.},
  volume       = {27},
  number       = {13},
  pages        = {283--287},
  year         = {2011},
  url          = {https://doi.org/10.1093/bioinformatics/btr211},
  doi          = {10.1093/BIOINFORMATICS/BTR211},
  timestamp    = {Tue, 08 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BonzanniZOF11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/DikiciogluKRPKO11,
  author       = {Duygu Dikicioglu and
                  Muhammed Erkan Karabekmez and
                  Bharat Rash and
                  Pinar Pir and
                  Bet{\"{u}}l Kirdar and
                  Stephen G. Oliver},
  title        = {How yeast re-programmes its transcriptional profile in response to
                  different nutrient impulses},
  journal      = {{BMC} Syst. Biol.},
  volume       = {5},
  pages        = {148},
  year         = {2011},
  url          = {https://doi.org/10.1186/1752-0509-5-148},
  doi          = {10.1186/1752-0509-5-148},
  timestamp    = {Tue, 16 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/DikiciogluKRPKO11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/DobsonSJSLPLSDFHBOSKKOSM10,
  author       = {Paul D. Dobson and
                  Kieran Smallbone and
                  Daniel Jameson and
                  Evangelos Simeonidis and
                  Karin Lanthaler and
                  Pinar Pir and
                  Chuan Lu and
                  Neil Swainston and
                  Warwick B. Dunn and
                  Paul Fisher and
                  Duncan Hull and
                  Marie Brown and
                  Olusegun Oshota and
                  Natalie J. Stanford and
                  Douglas B. Kell and
                  Ross D. King and
                  Stephen G. Oliver and
                  Robert D. Stevens and
                  Pedro Mendes},
  title        = {Further developments towards a genome-scale metabolic model of yeast},
  journal      = {{BMC} Syst. Biol.},
  volume       = {4},
  pages        = {145},
  year         = {2010},
  url          = {https://doi.org/10.1186/1752-0509-4-145},
  doi          = {10.1186/1752-0509-4-145},
  timestamp    = {Fri, 22 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/DobsonSJSLPLSDFHBOSKKOSM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JamesonTAKRSGSOWKP09,
  author       = {Daniel Jameson and
                  David A. Turner and
                  John Ankers and
                  Stephnie Kennedy and
                  Sheila Ryan and
                  Neil Swainston and
                  Tony Griffiths and
                  David G. Spiller and
                  Stephen G. Oliver and
                  Michael R. H. White and
                  Douglas B. Kell and
                  Norman W. Paton},
  title        = {Information management for high content live cell imaging},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-226},
  doi          = {10.1186/1471-2105-10-226},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/JamesonTAKRSGSOWKP09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computer/KingRALMSWCYSOP09,
  author       = {Ross D. King and
                  Jem J. Rowland and
                  Wayne Aubrey and
                  Maria Liakata and
                  Magdalena Markham and
                  Larisa N. Soldatova and
                  Ken E. Whelan and
                  Amanda Clare and
                  Mike Young and
                  Andrew Sparkes and
                  Stephen G. Oliver and
                  Pinar Pir},
  title        = {The Robot Scientist Adam},
  journal      = {Computer},
  volume       = {42},
  number       = {8},
  pages        = {46--54},
  year         = {2009},
  url          = {https://doi.org/10.1109/MC.2009.270},
  doi          = {10.1109/MC.2009.270},
  timestamp    = {Wed, 12 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/computer/KingRALMSWCYSOP09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JamesonGGBAOP08,
  author       = {Daniel Jameson and
                  Kevin L. Garwood and
                  Christopher Garwood and
                  Tim Booth and
                  Pinar Alper and
                  Stephen G. Oliver and
                  Norman W. Paton},
  title        = {Data capture in bioinformatics: requirements and experiences with
                  Pedro},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-183},
  doi          = {10.1186/1471-2105-9-183},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/JamesonGGBAOP08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiCVWSOWOPGOK08,
  author       = {Peter Li and
                  Juan I. Castrillo and
                  Giles Velarde and
                  Ingo Wassink and
                  Stian Soiland{-}Reyes and
                  Stuart Owen and
                  David Withers and
                  Tom Oinn and
                  Matthew R. Pocock and
                  Carole A. Goble and
                  Stephen G. Oliver and
                  Douglas B. Kell},
  title        = {Performing statistical analyses on quantitative data in Taverna workflows:
                  An example using {R} and maxdBrowse to identify differentially-expressed
                  genes from microarray data},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-334},
  doi          = {10.1186/1471-2105-9-334},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/LiCVWSOWOPGOK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SiepenBSEPGOSZMPJCHPJOH08,
  author       = {Jennifer A. Siepen and
                  Khalid Belhajjame and
                  Julian N. Selley and
                  Suzanne M. Embury and
                  Norman W. Paton and
                  Carole A. Goble and
                  Stephen G. Oliver and
                  Robert Stevens and
                  Lucas Zamboulis and
                  Nigel J. Martin and
                  Alexandra Poulovassilis and
                  Philip Jones and
                  Richard G. C{\^{o}}t{\'{e}} and
                  Henning Hermjakob and
                  Melissa M. Pentony and
                  David T. Jones and
                  Christine A. Orengo and
                  Simon J. Hubbard},
  title        = {{ISPIDER} Central: an integrated database web-server for proteomics},
  journal      = {Nucleic Acids Res.},
  volume       = {36},
  number       = {Web-Server-Issue},
  pages        = {485--490},
  year         = {2008},
  url          = {https://doi.org/10.1093/nar/gkn196},
  doi          = {10.1093/NAR/GKN196},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SiepenBSEPGOSZMPJCHPJOH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/AmoutziasPMGIRBRO07,
  author       = {Grigoris D. Amoutzias and
                  Elgar Pichler and
                  Nina Mian and
                  David De Graaf and
                  Anastasia Imsiridou and
                  Marc Robinson{-}Rechavi and
                  Erich Bornberg{-}Bauer and
                  David L. Robertson and
                  Stephen G. Oliver},
  title        = {A protein interaction atlas for the nuclear receptors: properties
                  and quality of a hub-based dimerisation network},
  journal      = {{BMC} Syst. Biol.},
  volume       = {1},
  pages        = {34},
  year         = {2007},
  url          = {https://doi.org/10.1186/1752-0509-1-34},
  doi          = {10.1186/1752-0509-1-34},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/AmoutziasPMGIRBRO07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HakesLOR07,
  author       = {Luke Hakes and
                  Simon C. Lovell and
                  Stephen G. Oliver and
                  David L. Robertson},
  title        = {Similarity in expression accounts for correlated evolution of interacting
                  proteins},
  journal      = {{BMC} Syst. Biol.},
  volume       = {1},
  number       = {{S-1}},
  pages        = {P59},
  year         = {2007},
  url          = {https://doi.org/10.1186/1752-0509-1-S1-P59},
  doi          = {10.1186/1752-0509-1-S1-P59},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/HakesLOR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/AlamCSHWRHTOP07,
  author       = {Intikhab Alam and
                  Mike Cornell and
                  Darren M. Soanes and
                  Cornelia Hedeler and
                  Han Min Wong and
                  Magnus Rattray and
                  Simon J. Hubbard and
                  Nicholas J. Talbot and
                  Stephen G. Oliver and
                  Norman W. Paton},
  title        = {A Methodology for Comparative Functional Genomics},
  journal      = {J. Integr. Bioinform.},
  volume       = {4},
  number       = {3},
  year         = {2007},
  url          = {https://doi.org/10.2390/biecoll-jib-2007-69},
  doi          = {10.2390/BIECOLL-JIB-2007-69},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/AlamCSHWRHTOP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PirKHOUO06,
  author       = {Pinar Pir and
                  Bet{\"{u}}l Kirdar and
                  Andrew Hayes and
                  Z. Ilsen {\"{O}}nsan and
                  Kutlu {\"{O}}. {\"{U}}lgen and
                  Stephen G. Oliver},
  title        = {Integrative investigation of metabolic and transcriptomic data},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {203},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-203},
  doi          = {10.1186/1471-2105-7-203},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/PirKHOUO06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SpasicDVTJHOK06,
  author       = {Irena Spasic and
                  Warwick B. Dunn and
                  Giles Velarde and
                  Andy Tseng and
                  Helen Jenkins and
                  Nigel Hardy and
                  Stephen G. Oliver and
                  Douglas B. Kell},
  title        = {MeMo: a hybrid {SQL/XML} approach to metabolomic data management for
                  functional genomics},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {281},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-281},
  doi          = {10.1186/1471-2105-7-281},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SpasicDVTJHOK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GarwoodGHGSOP06,
  author       = {Kevin L. Garwood and
                  Christopher Garwood and
                  Cornelia Hedeler and
                  Tony Griffiths and
                  Neil Swainston and
                  Stephen G. Oliver and
                  Norman W. Paton},
  title        = {Model-driven user interfaces for bioinformatics data resources: regenerating
                  the wheel as an alternative to reinventing it},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  pages        = {532},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-532},
  doi          = {10.1186/1471-2105-7-532},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/GarwoodGHGSOP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GarwoodTRBOP04,
  author       = {Kevin L. Garwood and
                  Chris F. Taylor and
                  Kai J. Runte and
                  Andy Brass and
                  Stephen G. Oliver and
                  Norman W. Paton},
  title        = {Pedro: a configurable data entry tool for {XML}},
  journal      = {Bioinform.},
  volume       = {20},
  number       = {15},
  pages        = {2463--2465},
  year         = {2004},
  url          = {https://doi.org/10.1093/bioinformatics/bth251},
  doi          = {10.1093/BIOINFORMATICS/BTH251},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GarwoodTRBOP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MabeyAGMAPBROD04,
  author       = {J. E. Mabey and
                  M. J. Anderson and
                  Peter F. Giles and
                  Crispin J. Miller and
                  Terri K. Attwood and
                  Norman W. Paton and
                  Erich Bornberg{-}Bauer and
                  G. D. Robson and
                  Stephen G. Oliver and
                  David W. Denning},
  title        = {{CADRE:} the Central Aspergillus Data REpository},
  journal      = {Nucleic Acids Res.},
  volume       = {32},
  number       = {Database-Issue},
  pages        = {401--405},
  year         = {2004},
  url          = {https://doi.org/10.1093/nar/gkh009},
  doi          = {10.1093/NAR/GKH009},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MabeyAGMAPBROD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BoardmanOH03,
  author       = {Paul E. Boardman and
                  Stephen G. Oliver and
                  Simon J. Hubbard},
  title        = {SiteSeer: visualisation and analysis of transcription factor binding
                  sites in nucleotide sequences},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3572--3575},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg511},
  doi          = {10.1093/NAR/GKG511},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/BoardmanOH03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/etai/BryantMOKRK01,
  author       = {Christopher H. Bryant and
                  Stephen H. Muggleton and
                  Stephen G. Oliver and
                  Douglas B. Kell and
                  Philip G. K. Reiser and
                  Ross D. King},
  title        = {Combining Inductive Logic Programming, Active Learning and Robotics
                  to Discover the Function of Genes},
  journal      = {Electron. Trans. Artif. Intell.},
  volume       = {5},
  number       = {B},
  pages        = {1--36},
  year         = {2001},
  url          = {http://www.ep.liu.se/ej/etai/2001/001/},
  timestamp    = {Sat, 30 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/etai/BryantMOKRK01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/etai/ReiserKKMBO01,
  author       = {Philip G. K. Reiser and
                  Ross D. King and
                  Douglas B. Kell and
                  Stephen H. Muggleton and
                  Christopher H. Bryant and
                  Stephen G. Oliver},
  title        = {Developing a Logical Model of Yeast Metabolism},
  journal      = {Electron. Trans. Artif. Intell.},
  volume       = {5},
  number       = {B},
  pages        = {223--244},
  year         = {2001},
  url          = {http://www.ep.liu.se/ej/etai/2001/013/},
  timestamp    = {Sat, 30 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/etai/ReiserKKMBO01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/CornellPWGMKEBHO01,
  author       = {Mike Cornell and
                  Norman W. Paton and
                  Shengli Wu and
                  Carole A. Goble and
                  Crispin J. Miller and
                  Paul Kirby and
                  Karen Eilbeck and
                  Andy Brass and
                  Andrew Hayes and
                  Stephen G. Oliver},
  editor       = {Nikolaos G. Bourbakis},
  title        = {{GIMS} - {A} Data Warehouse for Storage and Analysis of Genome Sequence
                  and Functional Data},
  booktitle    = {2nd {IEEE} International Symposium on Bioinformatics and Bioengineering,
                  Bethesda, Maryland, USA, November 4-5, 2001, Proceedings},
  pages        = {15--22},
  publisher    = {{IEEE} Computer Society},
  year         = {2001},
  url          = {https://doi.org/10.1109/BIBE.2001.974407},
  doi          = {10.1109/BIBE.2001.974407},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibe/CornellPWGMKEBHO01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PatonKHMBEGHO00,
  author       = {Norman W. Paton and
                  Shakeel A. Khan and
                  Andrew Hayes and
                  Fouzia Moussouni and
                  Andy Brass and
                  Karen Eilbeck and
                  Carole A. Goble and
                  Simon J. Hubbard and
                  Stephen G. Oliver},
  title        = {Conceptual modelling of genomic information},
  journal      = {Bioinform.},
  volume       = {16},
  number       = {6},
  pages        = {548--557},
  year         = {2000},
  url          = {https://doi.org/10.1093/bioinformatics/16.6.548},
  doi          = {10.1093/BIOINFORMATICS/16.6.548},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PatonKHMBEGHO00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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