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ORCIDBibTeX records: Webb Miller
@article{DBLP:journals/bmcbi/RatanOLM15,
author = {Aakrosh Ratan and
Thomas L. Olson and
Thomas P. Loughran and
Webb Miller},
title = {Identification of indels in next-generation sequencing data},
journal = {{BMC} Bioinform.},
volume = {16},
pages = {42:1--42:8},
year = {2015},
url = {https://doi.org/10.1186/s12859-015-0483-6},
doi = {10.1186/S12859-015-0483-6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RatanOLM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GiardineBVPMJBRMTWHP14,
author = {Belinda Giardine and
Joseph Borg and
Emmanouil Viennas and
Cristiana Pavlidis and
Kamran Moradkhani and
Philippe Joly and
Marina Bartsakoulia and
Cathy Riemer and
Webb Miller and
Giannis Tzimas and
Henri Wajcman and
Ross C. Hardison and
George P. Patrinos},
title = {Updates of the HbVar database of human hemoglobin variants and thalassemia
mutations},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {1063--1069},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt911},
doi = {10.1093/NAR/GKT911},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GiardineBVPMJBRMTWHP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongHRM11,
author = {Giltae Song and
Chih{-}Hao Hsu and
Cathy Riemer and
Webb Miller},
title = {Evaluation of methods for detecting conversion events in gene clusters},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S45},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S45},
doi = {10.1186/1471-2105-12-S1-S45},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SongHRM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RatanZHSM10,
author = {Aakrosh Ratan and
Yu Zhang and
Vanessa M. Hayes and
Stephan C. Schuster and
Webb Miller},
title = {Calling SNPs without a reference sequence},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {130},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-130},
doi = {10.1186/1471-2105-11-130},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RatanZHSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SongZVM10,
author = {Giltae Song and
Louxin Zhang and
Tom{\'{a}}s Vinar and
Webb Miller},
title = {{CAGE:} Combinatorial Analysis of Gene-Cluster Evolution},
journal = {J. Comput. Biol.},
volume = {17},
number = {9},
pages = {1227--1242},
year = {2010},
url = {https://doi.org/10.1089/cmb.2010.0094},
doi = {10.1089/CMB.2010.0094},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/SongZVM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HsuZHGM10,
author = {Chih{-}Hao Hsu and
Yu Zhang and
Ross C. Hardison and
Eric D. Green and
Webb Miller},
title = {An Effective Method for Detecting Gene Conversion Events in Whole
Genomes},
journal = {J. Comput. Biol.},
volume = {17},
number = {9},
pages = {1281--1297},
year = {2010},
url = {https://doi.org/10.1089/cmb.2010.0103},
doi = {10.1089/CMB.2010.0103},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/HsuZHGM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/MoretMPS10,
author = {Bernard M. E. Moret and
Webb Miller and
Pavel A. Pevzner and
David Sankoff},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Session Introduction},
booktitle = {Biocomputing 2010: Proceedings of the Pacific Symposium, Kamuela,
Hawaii, USA, 4-8 January 2010},
pages = {1--2},
publisher = {World Scientific Publishing},
year = {2010},
url = {http://psb.stanford.edu/psb-online/proceedings/psb10/intro-compgen.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/MoretMPS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/MillerWZSH10,
author = {Webb Miller and
Stephen J. Wright and
Yu Zhang and
Stephan C. Schuster and
Vanessa M. Hayes},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Optimization Methods for Selecting Founder Populations for Captive
Breeding of Endangered Species},
booktitle = {Biocomputing 2010: Proceedings of the Pacific Symposium, Kamuela,
Hawaii, USA, 4-8 January 2010},
pages = {43--53},
publisher = {World Scientific Publishing},
year = {2010},
url = {http://psb.stanford.edu/psb-online/proceedings/psb10/miller.pdf},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/MillerWZSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Addo-QuayeMA09,
author = {Charles Addo{-}Quaye and
Webb Miller and
Michael J. Axtell},
title = {CleaveLand: a pipeline for using degradome data to find cleaved small
{RNA} targets},
journal = {Bioinform.},
volume = {25},
number = {1},
pages = {130--131},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btn604},
doi = {10.1093/BIOINFORMATICS/BTN604},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Addo-QuayeMA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangSVGSM09,
author = {Yu Zhang and
Giltae Song and
Tom{\'{a}}s Vinar and
Eric D. Green and
Adam C. Siepel and
Webb Miller},
title = {Evolutionary History Reconstruction for Mammalian Complex Gene Clusters},
journal = {J. Comput. Biol.},
volume = {16},
number = {8},
pages = {1051--1070},
year = {2009},
url = {https://doi.org/10.1089/cmb.2009.0040},
doi = {10.1089/CMB.2009.0040},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangSVGSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/MoretMPS09,
author = {Bernard M. E. Moret and
Webb Miller and
Pavel A. Pevzner and
David Sankoff},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Session Introduction},
booktitle = {Biocomputing 2009: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, 5-9 January 2009},
pages = {111--113},
year = {2009},
url = {http://psb.stanford.edu/psb-online/proceedings/psb09/intro-compgen.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/MoretMPS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/ZhangSHM09,
author = {Yu Zhang and
Giltae Song and
Chih{-}Hao Hsu and
Webb Miller},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Simultaneous History Reconstruction for Complex Gene Clusters in Multiple
Species},
booktitle = {Biocomputing 2009: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, 5-9 January 2009},
pages = {162--173},
year = {2009},
url = {http://psb.stanford.edu/psb-online/proceedings/psb09/zhang-y.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/ZhangSHM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HouRBHM09,
author = {Minmei Hou and
Cathy Riemer and
Piotr Berman and
Ross C. Hardison and
Webb Miller},
editor = {Francesca D. Ciccarelli and
Istv{\'{a}}n Mikl{\'{o}}s},
title = {Aligning Two Genomic Sequences That Contain Duplications},
booktitle = {Comparative Genomics, International Workshop, {RECOMB-CG} 2009, Budapest,
Hungary, September 27-29, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5817},
pages = {98--110},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04744-2\_9},
doi = {10.1007/978-3-642-04744-2\_9},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HouRBHM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SongZVM09,
author = {Giltae Song and
Louxin Zhang and
Tom{\'{a}}s Vinar and
Webb Miller},
editor = {Francesca D. Ciccarelli and
Istv{\'{a}}n Mikl{\'{o}}s},
title = {Inferring the Recent Duplication History of a Gene Cluster},
booktitle = {Comparative Genomics, International Workshop, {RECOMB-CG} 2009, Budapest,
Hungary, September 27-29, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5817},
pages = {111--125},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04744-2\_10},
doi = {10.1007/978-3-642-04744-2\_10},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/SongZVM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HsuZHM09,
author = {Chih{-}Hao Hsu and
Yu Zhang and
Ross C. Hardison and
Webb Miller},
editor = {Francesca D. Ciccarelli and
Istv{\'{a}}n Mikl{\'{o}}s},
title = {Whole-Genome Analysis of Gene Conversion Events},
booktitle = {Comparative Genomics, International Workshop, {RECOMB-CG} 2009, Budapest,
Hungary, September 27-29, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5817},
pages = {181--192},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04744-2\_15},
doi = {10.1007/978-3-642-04744-2\_15},
timestamp = {Thu, 23 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/HsuZHM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MaRRSZMH08,
author = {Jian Ma and
Aakrosh Ratan and
Brian J. Raney and
Bernard B. Suh and
Louxin Zhang and
Webb Miller and
David Haussler},
title = {{DUPCAR:} Reconstructing Contiguous Ancestral Regions with Duplications},
journal = {J. Comput. Biol.},
volume = {15},
number = {8},
pages = {1007--1027},
year = {2008},
url = {https://doi.org/10.1089/cmb.2008.0069},
doi = {10.1089/CMB.2008.0069},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/MaRRSZMH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KarolchikKBBCDGHHHKMPPRRRSSTTWZHK08,
author = {Donna Karolchik and
Robert M. Kuhn and
Robert Baertsch and
Galt P. Barber and
Hiram Clawson and
Mark Diekhans and
Belinda Giardine and
Rachel A. Harte and
Angela S. Hinrichs and
Fan Hsu and
Kord M. Kober and
Webb Miller and
Jakob Skou Pedersen and
Andy Pohl and
Brian J. Raney and
Brooke L. Rhead and
Kate R. Rosenbloom and
Kayla E. Smith and
Mario Stanke and
Archana Thakkapallayil and
Heather Trumbower and
Ting Wang and
Ann S. Zweig and
David Haussler and
W. James Kent},
title = {The {UCSC} Genome Browser Database: 2008 update},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {773--779},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm966},
doi = {10.1093/NAR/GKM966},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KarolchikKBBCDGHHHKMPPRRRSSTTWZHK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pnas/0004RRSMH08,
author = {Jian Ma and
Aakrosh Ratan and
Brian J. Raney and
Bernard B. Suh and
Webb Miller and
David Haussler},
title = {The infinite sites model of genome evolution},
journal = {Proc. Natl. Acad. Sci. {USA}},
volume = {105},
number = {38},
pages = {14254--14261},
year = {2008},
url = {https://doi.org/10.1073/pnas.0805217105},
doi = {10.1073/PNAS.0805217105},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pnas/0004RRSMH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/NguyenSHSMZ08,
author = {C. Thach Nguyen and
Jian Shen and
Minmei Hou and
Li Sheng and
Webb Miller and
Louxin Zhang},
title = {Approximating the Spanning Star Forest Problem and Its Application
to Genomic Sequence Alignment},
journal = {{SIAM} J. Comput.},
volume = {38},
number = {3},
pages = {946--962},
year = {2008},
url = {https://doi.org/10.1137/070682150},
doi = {10.1137/070682150},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/NguyenSHSMZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhangSVGSM08,
author = {Yu Zhang and
Giltae Song and
Tom{\'{a}}s Vinar and
Eric D. Green and
Adam C. Siepel and
Webb Miller},
editor = {Martin Vingron and
Limsoon Wong},
title = {Reconstructing the Evolutionary History of Complex Human Gene Clusters},
booktitle = {Research in Computational Molecular Biology, 12th Annual International
Conference, {RECOMB} 2008, Singapore, March 30 - April 2, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4955},
pages = {29--49},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78839-3\_4},
doi = {10.1007/978-3-540-78839-3\_4},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZhangSVGSM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MaRZMH07,
author = {Jian Ma and
Aakrosh Ratan and
Louxin Zhang and
Webb Miller and
David Haussler},
editor = {Glenn Tesler and
Dannie Durand},
title = {A Heuristic Algorithm for Reconstructing Ancestral Gene Orders with
Duplications},
booktitle = {Comparative Genomics, {RECOMB} 2007 International Workshop, {RECOMB-CG}
2007, San Diego, CA, USA, September 16-18, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4751},
pages = {122--135},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-74960-8\_10},
doi = {10.1007/978-3-540-74960-8\_10},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MaRZMH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/NguyenSHSMZ07,
author = {C. Thach Nguyen and
Jian Shen and
Minmei Hou and
Li Sheng and
Webb Miller and
Louxin Zhang},
editor = {Nikhil Bansal and
Kirk Pruhs and
Clifford Stein},
title = {Approximating the spanning star forest problem and its applications
to genomic sequence alignment},
booktitle = {Proceedings of the Eighteenth Annual {ACM-SIAM} Symposium on Discrete
Algorithms, {SODA} 2007, New Orleans, Louisiana, USA, January 7-9,
2007},
pages = {645--654},
publisher = {{SIAM}},
year = {2007},
url = {http://dl.acm.org/citation.cfm?id=1283383.1283453},
timestamp = {Tue, 15 Feb 2022 07:54:27 +0100},
biburl = {https://dblp.org/rec/conf/soda/NguyenSHSMZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/PedersenBSRLLKMH06,
author = {Jakob Skou Pedersen and
Gill Bejerano and
Adam C. Siepel and
Kate R. Rosenbloom and
Kerstin Lindblad{-}Toh and
Eric S. Lander and
Jim Kent and
Webb Miller and
David Haussler},
title = {Identification and Classification of Conserved {RNA} Secondary Structures
in the Human Genome},
journal = {PLoS Comput. Biol.},
volume = {2},
number = {4},
year = {2006},
url = {https://doi.org/10.1371/journal.pcbi.0020033},
doi = {10.1371/JOURNAL.PCBI.0020033},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/PedersenBSRLLKMH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HouBZM06,
author = {Minmei Hou and
Piotr Berman and
Louxin Zhang and
Webb Miller},
editor = {Philipp Bucher and
Bernard M. E. Moret},
title = {Controlling Size When Aligning Multiple Genomic Sequences with Duplications},
booktitle = {Algorithms in Bioinformatics, 6th International Workshop, {WABI} 2006,
Zurich, Switzerland, September 11-13, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4175},
pages = {138--149},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11851561\_13},
doi = {10.1007/11851561\_13},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/HouBZM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ElnitskiGSZRWBMH05,
author = {Laura Elnitski and
Belinda Giardine and
Prachi Shah and
Yi Zhang and
Cathy Riemer and
Matthew T. Weirauch and
Richard Burhans and
Webb Miller and
Ross C. Hardison},
title = {Improvements to {GALA} and dbERGE {II:} databases featuring genomic
sequence alignment, annotation and experimental results},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {466--470},
year = {2005},
url = {https://doi.org/10.1093/nar/gki045},
doi = {10.1093/NAR/GKI045},
timestamp = {Fri, 26 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ElnitskiGSZRWBMH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangLLCWMd04,
author = {Ji{-}Ping Z. Wang and
Bruce G. Lindsay and
James H. Leebens{-}Mack and
Liying Cui and
P. Kerr Wall and
Webb Colby Miller and
Claude W. dePamphilis},
title = {{EST} clustering error evaluation and correction},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2973--2984},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth342},
doi = {10.1093/BIOINFORMATICS/BTH342},
timestamp = {Wed, 14 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangLLCWMd04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PatrinosGRMCAWH04,
author = {George P. Patrinos and
Belinda Giardine and
Cathy Riemer and
Webb Miller and
David H. K. Chui and
Nicholas P. Anagnou and
Henri Wajcman and
Ross C. Hardison},
title = {Improvements in the HbVar database of human hemoglobin variants and
thalassemia mutations for population and sequence variation studies},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Database-Issue},
pages = {537--541},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh006},
doi = {10.1093/NAR/GKH006},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PatrinosGRMCAWH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/VeeramachaneniBM03,
author = {Vamsi Veeramachaneni and
Piotr Berman and
Webb Miller},
title = {Aligning two fragmented sequences},
journal = {Discret. Appl. Math.},
volume = {127},
number = {1},
pages = {119--143},
year = {2003},
url = {https://doi.org/10.1016/S0166-218X(02)00289-5},
doi = {10.1016/S0166-218X(02)00289-5},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/VeeramachaneniBM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LiM03,
author = {Jia Li and
Webb Miller},
title = {Significance of Interspecies Matches when Evolutionary Rate Varies},
journal = {J. Comput. Biol.},
volume = {10},
number = {3/4},
pages = {537--554},
year = {2003},
url = {https://doi.org/10.1089/10665270360688174},
doi = {10.1089/10665270360688174},
timestamp = {Wed, 10 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/LiM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchwartzELWRSGHM03,
author = {Scott Schwartz and
Laura Elnitski and
Mei Li and
Matthew T. Weirauch and
Cathy Riemer and
Arian Smit and
Eric D. Green and
Ross C. Hardison and
Webb Miller},
title = {MultiPipMaker and supporting tools: alignments and analysis of multiple
genomic {DNA} sequences},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3518--3524},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg579},
doi = {10.1093/NAR/GKG579},
timestamp = {Fri, 26 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SchwartzELWRSGHM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FloreaMRSM03,
author = {Liliana Florea and
Michael McClelland and
Cathy Riemer and
Scott Schwartz and
Webb Miller},
title = {EnteriX 2003: visualization tools for genome alignments of Enterobacteriaceae},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3527--3532},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg551},
doi = {10.1093/NAR/GKG551},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FloreaMRSM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2003,
editor = {Martin Vingron and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman and
Webb Miller},
title = {Proceedings of the Sventh Annual International Conference on Computational
Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
publisher = {{ACM}},
year = {2003},
url = {https://doi.org/10.1145/640075},
doi = {10.1145/640075},
isbn = {1-58113-635-8},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/2003.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/VeeramachaneniBM02,
author = {Vamsi Veeramachaneni and
Piotr Berman and
Webb Miller},
title = {Aligning Two Fragmented Sequences},
booktitle = {16th International Parallel and Distributed Processing Symposium {(IPDPS}
2002), 15-19 April 2002, Fort Lauderdale, FL, USA, CD-ROM/Abstracts
Proceedings},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/IPDPS.2002.1016591},
doi = {10.1109/IPDPS.2002.1016591},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/VeeramachaneniBM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LiM02,
author = {Jia Li and
Webb Miller},
editor = {Gene Myers and
Sridhar Hannenhalli and
David Sankoff and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Significance Of inter-species matches when evolutionary rate varies},
booktitle = {Proceedings of the Sixth Annual International Conference on Computational
Biology, {RECOMB} 2002, Washington, DC, USA, April 18-21, 2002},
pages = {216--224},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/565196.565224},
doi = {10.1145/565196.565224},
timestamp = {Wed, 10 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LiM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Miller01,
author = {Webb Miller},
title = {Comparison of genomic {DNA} sequences: solved and unsolved problems},
journal = {Bioinform.},
volume = {17},
number = {5},
pages = {391--397},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.5.391},
doi = {10.1093/BIOINFORMATICS/17.5.391},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Miller01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WieheGM00,
author = {Thomas Wiehe and
Roderic Guig{\'{o}} and
Webb Miller},
title = {Genome Sequence Comparisons: Hurdles in the Fast Lane to Functional
Genomics},
journal = {Briefings Bioinform.},
volume = {1},
number = {4},
pages = {381--388},
year = {2000},
url = {https://doi.org/10.1093/bib/1.4.381},
doi = {10.1093/BIB/1.4.381},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/WieheGM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangSWM00,
author = {Zheng Zhang and
Scott Schwartz and
Lukas Wagner and
Webb Miller},
title = {A Greedy Algorithm for Aligning {DNA} Sequences},
journal = {J. Comput. Biol.},
volume = {7},
number = {1-2},
pages = {203--214},
year = {2000},
url = {https://doi.org/10.1089/10665270050081478},
doi = {10.1089/10665270050081478},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangSWM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BermanZWKM00,
author = {Piotr Berman and
Zheng Zhang and
Yuri I. Wolf and
Eugene V. Koonin and
Webb Miller},
title = {Winnowing Sequences from a Database Search},
journal = {J. Comput. Biol.},
volume = {7},
number = {1-2},
pages = {293--302},
year = {2000},
url = {https://doi.org/10.1089/10665270050081531},
doi = {10.1089/10665270050081531},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/BermanZWKM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangBWM99,
author = {Zheng Zhang and
Piotr Berman and
Thomas Wiehe and
Webb Miller},
title = {Post-processing long pairwise alignments},
journal = {Bioinform.},
volume = {15},
number = {12},
pages = {1012--1019},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.12.1012},
doi = {10.1093/BIOINFORMATICS/15.12.1012},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangBWM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BermanZWKM99,
author = {Piotr Berman and
Zheng Zhang and
Yuri I. Wolf and
Eugene V. Koonin and
Webb Miller},
editor = {Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Winnowing sequences from a database search},
booktitle = {Proceedings of the Third Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1999, Lyon, France, April
11-14, 1999},
pages = {50--58},
publisher = {{ACM}},
year = {1999},
url = {https://doi.org/10.1145/299432.299451},
doi = {10.1145/299432.299451},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BermanZWKM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangBM98,
author = {Zheng Zhang and
Piotr Berman and
Webb Miller},
title = {Alignments without Low-Scoring Regions},
journal = {J. Comput. Biol.},
volume = {5},
number = {2},
pages = {197--210},
year = {1998},
url = {https://doi.org/10.1089/cmb.1998.5.197},
doi = {10.1089/CMB.1998.5.197},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangBM98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhangBM98,
author = {Zheng Zhang and
Piotr Berman and
Webb Miller},
editor = {Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Alignments without low-scoring regions},
booktitle = {Proceedings of the Second Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1998, New York, NY, USA,
March 22-25, 1998},
pages = {294--301},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/279069.279137},
doi = {10.1145/279069.279137},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZhangBM98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaoZOM97,
author = {Kun{-}Mao Chao and
Jinghui Zhang and
James Ostell and
Webb Miller},
title = {A tool for aligning very similar {DNA} sequences},
journal = {Comput. Appl. Biosci.},
volume = {13},
number = {1},
pages = {75--80},
year = {1997},
url = {https://doi.org/10.1093/bioinformatics/13.1.75},
doi = {10.1093/BIOINFORMATICS/13.1.75},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaoZOM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangPM97,
author = {Zheng Zhang and
William R. Pearson and
Webb Miller},
title = {Aligning a {DNA} Sequence with a Protein Sequence},
journal = {J. Comput. Biol.},
volume = {4},
number = {3},
pages = {339--349},
year = {1997},
url = {https://doi.org/10.1089/cmb.1997.4.339},
doi = {10.1089/CMB.1997.4.339},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangPM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MyersSZM97,
author = {Gene Myers and
Sanford Selznick and
Zheng Zhang and
Webb Miller},
editor = {Michael S. Waterman},
title = {Progressive multiple alignment with constraints},
booktitle = {Proceedings of the First Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1997, Santa Fe, NM, USA,
January 20-23, 1997},
pages = {220--225},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267521.267758},
doi = {10.1145/267521.267758},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MyersSZM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhangPM97,
author = {Zheng Zhang and
William R. Pearson and
Webb Miller},
editor = {Michael S. Waterman},
title = {Aligning a {DNA} sequence with a protein sequence},
booktitle = {Proceedings of the First Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1997, Santa Fe, NM, USA,
January 20-23, 1997},
pages = {337--343},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267521.267893},
doi = {10.1145/267521.267893},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZhangPM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/StojanovicBGHM97,
author = {Nikola Stojanovic and
Piotr Berman and
Deborah Gumucio and
Ross C. Hardison and
Webb Miller},
editor = {Frank K. H. A. Dehne and
Andrew Rau{-}Chaplin and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Roberto Tamassia},
title = {A Linear-Time Algorithm for the 1-Mismatch Problem},
booktitle = {Algorithms and Data Structures, 5th International Workshop, {WADS}
'97, Halifax, Nova Scotia, Canada, August 6-8, 1997, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1272},
pages = {126--135},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/3-540-63307-3\_53},
doi = {10.1007/3-540-63307-3\_53},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/wads/StojanovicBGHM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/ZhangHM96,
author = {Z. Zhang and
B. He and
Webb Miller},
title = {Local Multiple Alignment Via Subgraph Enumeration},
journal = {Discret. Appl. Math.},
volume = {71},
number = {1-3},
pages = {337--365},
year = {1996},
url = {https://doi.org/10.1016/S0166-218X(96)00072-8},
doi = {10.1016/S0166-218X(96)00072-8},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/ZhangHM96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/FurerM96,
author = {Martin F{\"{u}}rer and
Webb Miller},
title = {Alignment-to-Alignment Editing with "Move Gap" Operations},
journal = {Int. J. Found. Comput. Sci.},
volume = {7},
number = {1},
pages = {23--42},
year = {1996},
url = {https://doi.org/10.1142/S012905419600004X},
doi = {10.1142/S012905419600004X},
timestamp = {Mon, 16 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijfcs/FurerM96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MyersSZM96,
author = {Gene Myers and
Sanford Selznick and
Zheng Zhang and
Webb Miller},
title = {Progressive Multiple Alignment with Constraints},
journal = {J. Comput. Biol.},
volume = {3},
number = {4},
pages = {563--572},
year = {1996},
url = {https://doi.org/10.1089/cmb.1996.3.563},
doi = {10.1089/CMB.1996.3.563},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/MyersSZM96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/ChaoM95,
author = {Kun{-}Mao Chao and
Webb Miller},
title = {Linear-Space Algorithms that Build Local Alignments from Fragments},
journal = {Algorithmica},
volume = {13},
number = {1/2},
pages = {106--134},
year = {1995},
url = {https://doi.org/10.1007/BF01188583},
doi = {10.1007/BF01188583},
timestamp = {Mon, 05 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithmica/ChaoM95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaoZOM95,
author = {Kun{-}Mao Chao and
Jinghui Zhang and
James Ostell and
Webb Miller},
title = {A local alignment tool for very long {DNA} sequences},
journal = {Comput. Appl. Biosci.},
volume = {11},
number = {2},
pages = {147--153},
year = {1995},
url = {https://doi.org/10.1093/bioinformatics/11.2.147},
doi = {10.1093/BIOINFORMATICS/11.2.147},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaoZOM95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hicss/MillerEPRSSH95,
author = {Webb Miller and
Ahmed Elsherbini and
Jamie Peck and
Cathy Riemer and
Scott Schwartz and
Nikola Stojanovic and
Ross C. Hardison},
title = {A database for globin gene expression data},
booktitle = {28th Annual Hawaii International Conference on System Sciences (HICSS-28),
January 3-6, 1995, Kihei, Maui, Hawaii, {USA}},
pages = {62--71},
publisher = {{IEEE} Computer Society},
year = {1995},
url = {https://doi.org/10.1109/HICSS.1995.375350},
doi = {10.1109/HICSS.1995.375350},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hicss/MillerEPRSSH95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/MyersM95,
author = {Gene Myers and
Webb Miller},
editor = {Kenneth L. Clarkson},
title = {Chaining Multiple-Alignment Fragments in Sub-Quadratic Time},
booktitle = {Proceedings of the Sixth Annual {ACM-SIAM} Symposium on Discrete Algorithms,
22-24 January 1995. San Francisco, California, {USA}},
pages = {38--47},
publisher = {{ACM/SIAM}},
year = {1995},
url = {http://dl.acm.org/citation.cfm?id=313651.313661},
timestamp = {Thu, 05 Jul 2018 07:29:25 +0200},
biburl = {https://dblp.org/rec/conf/soda/MyersM95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MillerB94,
author = {Webb Miller and
Mark Boguski},
title = {A note about computing all local alignments},
journal = {Comput. Appl. Biosci.},
volume = {10},
number = {4},
pages = {455--456},
year = {1994},
url = {https://doi.org/10.1093/bioinformatics/10.4.455},
doi = {10.1093/BIOINFORMATICS/10.4.455},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MillerB94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MillerBR0H94,
author = {Webb Miller and
Mark Boguski and
Balaji Raghavachari and
Zheng Zhang and
Ross C. Hardison},
title = {Constructing Aligned Sequence Blocks},
journal = {J. Comput. Biol.},
volume = {1},
number = {1},
pages = {51--64},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.51},
doi = {10.1089/CMB.1994.1.51},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/MillerBR0H94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhangRHM94,
author = {Zheng Zhang and
Balaji Raghavachari and
Ross C. Hardison and
Webb Miller},
title = {Chaining Multiple-Alignment Blocks},
journal = {J. Comput. Biol.},
volume = {1},
number = {3},
pages = {217--226},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.217},
doi = {10.1089/CMB.1994.1.217},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ZhangRHM94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ChaoHM94,
author = {Kun{-}Mao Chao and
Ross C. Hardison and
Webb Miller},
title = {Recent Developments in Linear-Space Alignment Methods: {A} Survey},
journal = {J. Comput. Biol.},
volume = {1},
number = {4},
pages = {271--291},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.271},
doi = {10.1089/CMB.1994.1.271},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/ChaoHM94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/HuangPM94,
author = {Xiaoqiu Huang and
Pavel A. Pevzner and
Webb Miller},
editor = {Maxime Crochemore and
Dan Gusfield},
title = {Parametric Recomuting in Alignment Graphs},
booktitle = {Combinatorial Pattern Matching, 5th Annual Symposium, {CPM} 94, Asilomar,
California, USA, June 5-8, 1994, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {807},
pages = {87--101},
publisher = {Springer},
year = {1994},
url = {https://doi.org/10.1007/3-540-58094-8\_8},
doi = {10.1007/3-540-58094-8\_8},
timestamp = {Tue, 14 May 2019 10:00:38 +0200},
biburl = {https://dblp.org/rec/conf/cpm/HuangPM94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Miller93,
author = {Webb Miller},
title = {Building multiple alignments from pairwise alignments},
journal = {Comput. Appl. Biosci.},
volume = {9},
number = {2},
pages = {169--176},
year = {1993},
url = {https://doi.org/10.1093/bioinformatics/9.2.169},
doi = {10.1093/BIOINFORMATICS/9.2.169},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Miller93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaoHM93,
author = {Kun{-}Mao Chao and
Ross C. Hardison and
Webb Miller},
title = {Locating well-conserved regions within a pairwise alignment},
journal = {Comput. Appl. Biosci.},
volume = {9},
number = {4},
pages = {387--396},
year = {1993},
url = {https://doi.org/10.1093/bioinformatics/9.4.387},
doi = {10.1093/BIOINFORMATICS/9.4.387},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaoHM93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangMSH92,
author = {Xiaoqiu Huang and
Webb Miller and
Scott Schwartz and
Ross C. Hardison},
title = {Parallelization of a local similarity algorithm},
journal = {Comput. Appl. Biosci.},
volume = {8},
number = {2},
pages = {155--165},
year = {1992},
url = {https://doi.org/10.1093/bioinformatics/8.2.155},
doi = {10.1093/BIOINFORMATICS/8.2.155},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangMSH92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaoPM92,
author = {Kun{-}Mao Chao and
William R. Pearson and
Webb Miller},
title = {Aligning two sequences within a specified diagonal band},
journal = {Comput. Appl. Biosci.},
volume = {8},
number = {5},
pages = {481--487},
year = {1992},
url = {https://doi.org/10.1093/bioinformatics/8.5.481},
doi = {10.1093/BIOINFORMATICS/8.5.481},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaoPM92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MillerBR91,
author = {Webb Miller and
John Barr and
Kenneth E. Rudd},
title = {Improved algorithms for searching restriction maps},
journal = {Comput. Appl. Biosci.},
volume = {7},
number = {4},
pages = {447--456},
year = {1991},
url = {https://doi.org/10.1093/bioinformatics/7.4.447},
doi = {10.1093/BIOINFORMATICS/7.4.447},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MillerBR91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MillerOR90,
author = {Webb Miller and
James Ostell and
Kenneth E. Rudd},
title = {An algorithm for searching restriction maps},
journal = {Comput. Appl. Biosci.},
volume = {6},
number = {3},
pages = {247--252},
year = {1990},
url = {https://doi.org/10.1093/bioinformatics/6.3.247},
doi = {10.1093/BIOINFORMATICS/6.3.247},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MillerOR90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangHM90,
author = {Xiaoqiu Huang and
Ross C. Hardison and
Webb Miller},
title = {A space-efficient algorithm for local similarities},
journal = {Comput. Appl. Biosci.},
volume = {6},
number = {4},
pages = {373--381},
year = {1990},
url = {https://doi.org/10.1093/bioinformatics/6.4.373},
doi = {10.1093/BIOINFORMATICS/6.4.373},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangHM90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/WuMMM90,
author = {Sun Wu and
Udi Manber and
Gene Myers and
Webb Miller},
title = {An {O(NP)} Sequence Comparison Algorithm},
journal = {Inf. Process. Lett.},
volume = {35},
number = {6},
pages = {317--323},
year = {1990},
url = {https://doi.org/10.1016/0020-0190(90)90035-V},
doi = {10.1016/0020-0190(90)90035-V},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/WuMMM90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/toplas/MyersM89,
author = {Eugene W. Myers and
Webb Miller},
title = {Row Replacement Algorithms for Screen Editors},
journal = {{ACM} Trans. Program. Lang. Syst.},
volume = {11},
number = {1},
pages = {33--56},
year = {1989},
url = {https://doi.org/10.1145/59287.59290},
doi = {10.1145/59287.59290},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/toplas/MyersM89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MyersM88,
author = {Eugene W. Myers and
Webb Miller},
title = {Optimal alignments in linear space},
journal = {Comput. Appl. Biosci.},
volume = {4},
number = {1},
pages = {11--17},
year = {1988},
url = {https://doi.org/10.1093/bioinformatics/4.1.11},
doi = {10.1093/BIOINFORMATICS/4.1.11},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MyersM88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spe/MillerM88,
author = {Webb Miller and
Eugene W. Myers},
title = {A Simple Row-replacement Method},
journal = {Softw. Pract. Exp.},
volume = {18},
number = {7},
pages = {597--611},
year = {1988},
url = {https://doi.org/10.1002/spe.4380180703},
doi = {10.1002/SPE.4380180703},
timestamp = {Thu, 09 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/spe/MillerM88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spe/MillerM86,
author = {Webb Miller and
Eugene W. Myers},
title = {Side-effects in Automatic File Updating},
journal = {Softw. Pract. Exp.},
volume = {16},
number = {9},
pages = {809--820},
year = {1986},
timestamp = {Thu, 09 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/spe/MillerM86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spe/MillerM85,
author = {Webb Miller and
Eugene W. Myers},
title = {A File Comparison Program},
journal = {Softw. Pract. Exp.},
volume = {15},
number = {11},
pages = {1025--1040},
year = {1985},
url = {https://doi.org/10.1002/spe.4380151102},
doi = {10.1002/SPE.4380151102},
timestamp = {Thu, 09 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/spe/MillerM85.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/JohnsonMMW79,
author = {Donald B. Johnson and
Webb Miller and
Brian Minnihan and
Celia Wrathall},
title = {Reducibility Among Floating-Point Graphs},
journal = {J. {ACM}},
volume = {26},
number = {4},
pages = {739--760},
year = {1979},
url = {https://doi.org/10.1145/322154.322164},
doi = {10.1145/322154.322164},
timestamp = {Tue, 18 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jacm/JohnsonMMW79.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/toms/MillerS78,
author = {Webb Miller and
David L. Spooner},
title = {Software for Roundoff Analysis {II}},
journal = {{ACM} Trans. Math. Softw.},
volume = {4},
number = {4},
pages = {369--387},
year = {1978},
url = {https://doi.org/10.1145/356502.356496},
doi = {10.1145/356502.356496},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/toms/MillerS78.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/toms/MillerS78a,
author = {Webb Miller and
David L. Spooner},
title = {Algorithm 532: Software for Roundoff Analysis {[Z]}},
journal = {{ACM} Trans. Math. Softw.},
volume = {4},
number = {4},
pages = {388--390},
year = {1978},
url = {https://doi.org/10.1145/356502.356497},
doi = {10.1145/356502.356497},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/toms/MillerS78a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/signum/Miller78,
author = {Webb Miller},
title = {A case for {TOOLPACK}},
booktitle = {Proceedings of the {SIGNUM} Conference on the Programming Environment
for Development of Numerical Software, October 1, 1978, {USA}},
pages = {68--70},
publisher = {{ACM}},
year = {1978},
url = {https://doi.org/10.1145/800208.806432},
doi = {10.1145/800208.806432},
timestamp = {Mon, 09 Aug 2021 11:31:29 +0200},
biburl = {https://dblp.org/rec/conf/signum/Miller78.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/Miller76,
author = {Webb Miller},
title = {Graph Transformations for Roundoff Analysis},
journal = {{SIAM} J. Comput.},
volume = {5},
number = {2},
pages = {204--216},
year = {1976},
url = {https://doi.org/10.1137/0205017},
doi = {10.1137/0205017},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/Miller76.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tse/MillerS76,
author = {Webb Miller and
David L. Spooner},
title = {Automatic Generation of Floating-Point Test Data},
journal = {{IEEE} Trans. Software Eng.},
volume = {2},
number = {3},
pages = {223--226},
year = {1976},
url = {https://doi.org/10.1109/TSE.1976.233818},
doi = {10.1109/TSE.1976.233818},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tse/MillerS76.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/Miller75,
author = {Webb Miller},
title = {Computer Search for Numerical Instability},
journal = {J. {ACM}},
volume = {22},
number = {4},
pages = {512--521},
year = {1975},
url = {https://doi.org/10.1145/321906.321916},
doi = {10.1145/321906.321916},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/Miller75.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/Miller75,
author = {Webb Miller},
title = {Computational Complexity and Numerical Stability},
journal = {{SIAM} J. Comput.},
volume = {4},
number = {2},
pages = {97--107},
year = {1975},
url = {https://doi.org/10.1137/0204009},
doi = {10.1137/0204009},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/Miller75.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/toms/Miller75,
author = {Webb Miller},
title = {Software for Roundoff Analysis},
journal = {{ACM} Trans. Math. Softw.},
volume = {1},
number = {2},
pages = {108--128},
year = {1975},
url = {https://doi.org/10.1145/355637.355639},
doi = {10.1145/355637.355639},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/toms/Miller75.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/interval/Miller75,
author = {Webb Miller},
editor = {Karl Nickel},
title = {The Error in Interval Arithmetic},
booktitle = {Interval Mathemantics: Proceedings of the International Symposium,
Karlsruhe, West Germany, May 20-24, 1975},
series = {Lecture Notes in Computer Science},
volume = {29},
pages = {246--250},
publisher = {Springer},
year = {1975},
url = {https://doi.org/10.1007/3-540-07170-9\_24},
doi = {10.1007/3-540-07170-9\_24},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/interval/Miller75.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computing/Miller74,
author = {Webb Miller},
title = {Remarks on the complexity of roundoff analysis},
journal = {Computing},
volume = {12},
number = {2},
pages = {149--161},
year = {1974},
url = {https://doi.org/10.1007/BF02260371},
doi = {10.1007/BF02260371},
timestamp = {Fri, 08 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/computing/Miller74.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/Miller74,
author = {Webb Miller},
editor = {Robert L. Constable and
Robert W. Ritchie and
Jack W. Carlyle and
Michael A. Harrison},
title = {Computational Complexity and Numerical Stability},
booktitle = {Proceedings of the 6th Annual {ACM} Symposium on Theory of Computing,
April 30 - May 2, 1974, Seattle, Washington, {USA}},
pages = {317--322},
publisher = {{ACM}},
year = {1974},
url = {https://doi.org/10.1145/800119.803910},
doi = {10.1145/800119.803910},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/Miller74.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/Miller73,
author = {Webb Miller},
title = {Toward Abstract Numerical Analysis},
journal = {J. {ACM}},
volume = {20},
number = {3},
pages = {399--408},
year = {1973},
url = {https://doi.org/10.1145/321765.321772},
doi = {10.1145/321765.321772},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/Miller73.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/Miller73,
author = {Webb Miller},
editor = {Alfred V. Aho and
Allan Borodin and
Robert L. Constable and
Robert W. Floyd and
Michael A. Harrison and
Richard M. Karp and
H. Raymond Strong},
title = {Toward Mechanical Verification of Properties of Roundoff Error Propagation},
booktitle = {Proceedings of the 5th Annual {ACM} Symposium on Theory of Computing,
April 30 - May 2, 1973, Austin, Texas, {USA}},
pages = {50--58},
publisher = {{ACM}},
year = {1973},
url = {https://doi.org/10.1145/800125.804035},
doi = {10.1145/800125.804035},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/Miller73.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computing/Miller72,
author = {Webb Miller},
title = {Automatic a priori round-off analysis - Part {I:} Arithmetic Conditions},
journal = {Computing},
volume = {10},
number = {1-2},
pages = {97--106},
year = {1972},
url = {https://doi.org/10.1007/BF02242384},
doi = {10.1007/BF02242384},
timestamp = {Mon, 16 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/computing/Miller72.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/Miller70,
author = {Webb Miller},
title = {Recursive Function Theory and Numerical Analysis},
journal = {J. Comput. Syst. Sci.},
volume = {4},
number = {5},
pages = {465--472},
year = {1970},
url = {https://doi.org/10.1016/S0022-0000(70)80043-5},
doi = {10.1016/S0022-0000(70)80043-5},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcss/Miller70.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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