BibTeX records: Kenneth M. Merz Jr.

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@article{DBLP:journals/jcisd/Merz24,
  author       = {Kenneth M. Merz Jr.},
  title        = {In Memoriam: Dr. George W. A. Milne},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {1},
  pages        = {1--2},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.3c02016},
  doi          = {10.1021/ACS.JCIM.3C02016},
  timestamp    = {Fri, 26 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/Merz24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DasM24,
  author       = {Susanta Das and
                  Kenneth M. Merz Jr.},
  title        = {Molecular Gas-Phase Conformational Ensembles},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {3},
  pages        = {749--760},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.3c01309},
  doi          = {10.1021/ACS.JCIM.3C01309},
  timestamp    = {Thu, 29 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/DasM24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzWZ24,
  author       = {Kenneth M. Merz Jr. and
                  Guo{-}Wei Wei and
                  Feng Zhu},
  title        = {Editorial: Machine Learning in Bio-cheminformatics},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {7},
  pages        = {2125--2128},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c00444},
  doi          = {10.1021/ACS.JCIM.4C00444},
  timestamp    = {Fri, 17 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzWZ24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/KarmakarSM24,
  author       = {Tarak Karmakar and
                  Thereza A. Soares and
                  Kenneth M. Merz Jr.},
  title        = {Enhancing Coarse-Grained Models through Machine Learning},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {8},
  pages        = {2931--2932},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c00537},
  doi          = {10.1021/ACS.JCIM.4C00537},
  timestamp    = {Fri, 17 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/KarmakarSM24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/JinM24,
  author       = {Hongni Jin and
                  Kenneth M. Merz Jr.},
  title        = {Modeling Zinc Complexes Using Neural Networks},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {8},
  pages        = {3140--3148},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c00095},
  doi          = {10.1021/ACS.JCIM.4C00095},
  timestamp    = {Sat, 08 Jun 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/JinM24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzCCISWZ24,
  author       = {Kenneth M. Merz Jr. and
                  Yee{-}Siew Choong and
                  Zoe Cournia and
                  Olexandr Isayev and
                  Thereza A. Soares and
                  Guo{-}Wei Wei and
                  Feng Zhu},
  title        = {Editorial: Machine Learning in Materials Science},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {10},
  pages        = {3959--3960},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c00727},
  doi          = {10.1021/ACS.JCIM.4C00727},
  timestamp    = {Tue, 18 Jun 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzCCISWZ24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzWZ24a,
  author       = {Kenneth M. Merz Jr. and
                  Guo{-}Wei Wei and
                  Feng Zhu},
  title        = {Editorial: Cutting-Edge Methodologies in Omics Data Analysis},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {13},
  pages        = {4939--4940},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c01021},
  doi          = {10.1021/ACS.JCIM.4C01021},
  timestamp    = {Thu, 22 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzWZ24a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/GrynovaBMFWNSM24,
  author       = {Ganna Gryn'ova and
                  Tristan Bereau and
                  Carolin M{\"{u}}ller and
                  Pascal Friederich and
                  Rebecca C. Wade and
                  Ariane Nunes{-}Alves and
                  Thereza A. Soares and
                  Kenneth M. Merz Jr.},
  title        = {{EDITORIAL:} Chemical Compound Space Exploration by Multiscale High-Throughput
                  Screening and Machine Learning},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {15},
  pages        = {5737--5738},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c01300},
  doi          = {10.1021/ACS.JCIM.4C01300},
  timestamp    = {Thu, 12 Sep 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/GrynovaBMFWNSM24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzWZ23,
  author       = {Kenneth M. Merz Jr. and
                  Guo{-}Wei Wei and
                  Feng Zhu},
  title        = {Editorial: Machine Learning in Bio-cheminformatics},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {1},
  pages        = {1},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.2c01496},
  doi          = {10.1021/ACS.JCIM.2C01496},
  timestamp    = {Tue, 31 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzWZ23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ManathungaAGM23,
  author       = {Madushanka Manathunga and
                  Hasan Metin Aktulga and
                  Andreas W. G{\"{o}}tz and
                  Kenneth M. Merz Jr.},
  title        = {Quantum Mechanics/Molecular Mechanics Simulations on {NVIDIA} and
                  {AMD} Graphics Processing Units},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {3},
  pages        = {711--717},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.2c01505},
  doi          = {10.1021/ACS.JCIM.2C01505},
  timestamp    = {Sun, 04 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/ManathungaAGM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SoaresCNAWM23,
  author       = {Thereza A. Soares and
                  Zoe Cournia and
                  Kevin J. Naidoo and
                  Rommie E. Amaro and
                  Habibah A. Wahab and
                  Kenneth M. Merz Jr.},
  title        = {Guidelines for Reporting Molecular Dynamics Simulations in {JCIM}
                  Publications},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {11},
  pages        = {3227--3229},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c00599},
  doi          = {10.1021/ACS.JCIM.3C00599},
  timestamp    = {Fri, 07 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/SoaresCNAWM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DasDTM23,
  author       = {Susanta Das and
                  Laleh Dinpazhoh and
                  Kiyoto Aramis Tanemura and
                  Kenneth M. Merz Jr.},
  title        = {Rapid and Automated \emph{Ab Initio} Metabolite Collisional Cross
                  Section Prediction from {SMILES} Input},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {16},
  pages        = {4995--5000},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c00890},
  doi          = {10.1021/ACS.JCIM.3C00890},
  timestamp    = {Sat, 28 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/DasDTM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzWZ23a,
  author       = {Kenneth M. Merz Jr. and
                  Guo{-}Wei Wei and
                  Feng Zhu},
  title        = {Editorial: Harnessing the Power of Large Language Model-Based Chatbots
                  for Scientific Discovery},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {17},
  pages        = {5395},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c01244},
  doi          = {10.1021/ACS.JCIM.3C01244},
  timestamp    = {Sat, 14 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzWZ23a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NunesAlvesM23,
  author       = {Ariane Nunes{-}Alves and
                  Kenneth M. Merz Jr.},
  title        = {AlphaFold2 in Molecular Discovery},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {19},
  pages        = {5947--5949},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c01459},
  doi          = {10.1021/ACS.JCIM.3C01459},
  timestamp    = {Tue, 28 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/NunesAlvesM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/CaseABCCCFGGGIKKKKLLLLLMMNOOPPQRR23,
  author       = {David A. Case and
                  Hasan Metin Aktulga and
                  Kellon Belfon and
                  David S. Cerutti and
                  G. Andr{\'{e}}s Cisneros and
                  Vin{\'{\i}}cius Wilian D. Cruzeiro and
                  Negin Forouzesh and
                  Timothy J. Giese and
                  Andreas W. G{\"{o}}tz and
                  Holger Gohlke and
                  Saeed Izadi and
                  Koushik Kasavajhala and
                  Mehmet Cagri Kaymak and
                  Edward King and
                  Tom Kurtzman and
                  Tai{-}Sung Lee and
                  Pengfei Li and
                  Jian Liu and
                  Tyler Luchko and
                  Ray Luo and
                  Madushanka Manathunga and
                  Mat{\'{\i}}as R. Machado and
                  Hai Minh Nguyen and
                  Kurt A. O'Hearn and
                  Alexey V. Onufriev and
                  Feng Pan and
                  Sergio Pantano and
                  Ruxi Qi and
                  Ali Rahnamoun and
                  Ali Risheh and
                  Stephan Schott{-}Verdugo and
                  Akhil Shajan and
                  Jason M. Swails and
                  Junmei Wang and
                  Haixin Wei and
                  Xiongwu Wu and
                  Yongxian Wu and
                  Shi Zhang and
                  Shiji Zhao and
                  Qiang Zhu and
                  Thomas E. Cheatham and
                  Daniel R. Roe and
                  Adrian E. Roitberg and
                  Carlos Simmerling and
                  Darrin M. York and
                  Maria C. Nagan and
                  Kenneth M. Merz Jr.},
  title        = {AmberTools},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {20},
  pages        = {6183--6191},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c01153},
  doi          = {10.1021/ACS.JCIM.3C01153},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/CaseABCCCFGGGIKKKKLLLLLMMNOOPPQRR23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NaidooMW23,
  author       = {Kevin J. Naidoo and
                  Kenneth M. Merz Jr. and
                  Guo{-}Wei Wei},
  title        = {Modeling Reactions from Chemical Theories to Machine Learning},
  journal      = {J. Chem. Inf. Model.},
  volume       = {63},
  number       = {23},
  pages        = {7273},
  year         = {2023},
  url          = {https://doi.org/10.1021/acs.jcim.3c01807},
  doi          = {10.1021/ACS.JCIM.3C01807},
  timestamp    = {Fri, 26 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/NaidooMW23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/supercomputer/KaymakSCOMA23,
  author       = {Mehmet Cagri Kaymak and
                  Samuel S. Schoenholz and
                  Ekin D. Cubuk and
                  Kurt A. O'Hearn and
                  Kenneth M. Merz Jr. and
                  Hasan Metin Aktulga},
  editor       = {Abhinav Bhatele and
                  Jeff R. Hammond and
                  Marc Baboulin and
                  Carola Kruse},
  title        = {End-to-End Differentiable Reactive Molecular Dynamics Simulations
                  Using {JAX}},
  booktitle    = {High Performance Computing - 38th International Conference, {ISC}
                  High Performance 2023, Hamburg, Germany, May 21-25, 2023, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {13948},
  pages        = {202--219},
  publisher    = {Springer},
  year         = {2023},
  url          = {https://doi.org/10.1007/978-3-031-32041-5\_11},
  doi          = {10.1007/978-3-031-32041-5\_11},
  timestamp    = {Sat, 13 May 2023 16:51:19 +0200},
  biburl       = {https://dblp.org/rec/conf/supercomputer/KaymakSCOMA23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/WeiZM22,
  author       = {Guo{-}Wei Wei and
                  Feng Zhu and
                  Kenneth M. Merz Jr.},
  title        = {Editorial on Machine Learning},
  journal      = {J. Chem. Inf. Model.},
  volume       = {62},
  number       = {17},
  pages        = {3941},
  year         = {2022},
  url          = {https://doi.org/10.1021/acs.jcim.2c01031},
  doi          = {10.1021/ACS.JCIM.2C01031},
  timestamp    = {Tue, 18 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/WeiZM22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SoaresNMRWM22,
  author       = {Thereza A. Soares and
                  Ariane Nunes{-}Alves and
                  Angelica Mazzolari and
                  Fiorella Ruggiu and
                  Guo{-}Wei Wei and
                  Kenneth M. Merz Jr.},
  title        = {The (Re)-Evolution of Quantitative Structure-Activity Relationship
                  {(QSAR)} Studies Propelled by the Surge of Machine Learning Methods},
  journal      = {J. Chem. Inf. Model.},
  volume       = {62},
  number       = {22},
  pages        = {5317--5320},
  year         = {2022},
  url          = {https://doi.org/10.1021/acs.jcim.2c01422},
  doi          = {10.1021/ACS.JCIM.2C01422},
  timestamp    = {Sun, 12 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/SoaresNMRWM22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SharmaSM22,
  author       = {Gaurav Sharma and
                  Lin Frank Song and
                  Kenneth M. Merz Jr.},
  title        = {Effect of an Inhibitor on the ACE2-Receptor-Binding Domain of SARS-CoV-2},
  journal      = {J. Chem. Inf. Model.},
  volume       = {62},
  number       = {24},
  pages        = {6574--6585},
  year         = {2022},
  url          = {https://doi.org/10.1021/acs.jcim.1c01283},
  doi          = {10.1021/ACS.JCIM.1C01283},
  timestamp    = {Tue, 31 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/SharmaSM22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SenguptaLSLM21,
  author       = {Arkajyoti Sengupta and
                  Zhen Li and
                  Lin Frank Song and
                  Pengfei Li and
                  Kenneth M. Merz Jr.},
  title        = {Parameterization of Monovalent Ions for the OPC3, OPC, TIP3P-FB, and
                  {TIP4P-FB} Water Models},
  journal      = {J. Chem. Inf. Model.},
  volume       = {61},
  number       = {2},
  pages        = {869--880},
  year         = {2021},
  url          = {https://doi.org/10.1021/acs.jcim.0c01390},
  doi          = {10.1021/ACS.JCIM.0C01390},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/SenguptaLSLM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/TanemuraDM21,
  author       = {Kiyoto Aramis Tanemura and
                  Susanta Das and
                  Kenneth M. Merz Jr.},
  title        = {AutoGraph: Autonomous Graph-Based Clustering of Small-Molecule Conformations},
  journal      = {J. Chem. Inf. Model.},
  volume       = {61},
  number       = {4},
  pages        = {1647--1656},
  year         = {2021},
  url          = {https://doi.org/10.1021/acs.jcim.0c01492},
  doi          = {10.1021/ACS.JCIM.0C01492},
  timestamp    = {Sun, 16 May 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/TanemuraDM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/CruzeiroMMG21,
  author       = {Vin{\'{\i}}cius Wilian D. Cruzeiro and
                  Madushanka Manathunga and
                  Kenneth M. Merz Jr. and
                  Andreas W. G{\"{o}}tz},
  title        = {Open-Source Multi-GPU-Accelerated {QM/MM} Simulations with {AMBER}
                  and {QUICK}},
  journal      = {J. Chem. Inf. Model.},
  volume       = {61},
  number       = {5},
  pages        = {2109--2115},
  year         = {2021},
  url          = {https://doi.org/10.1021/acs.jcim.1c00169},
  doi          = {10.1021/ACS.JCIM.1C00169},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/CruzeiroMMG21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Sengupta0S0M21,
  author       = {Arkajyoti Sengupta and
                  Zhen Li and
                  Lin Frank Song and
                  Pengfei Li and
                  Kenneth M. Merz Jr.},
  title        = {Correction to "Parameterization of Monovalent Ions for the OPC3,
                  OPC, TIP3P-FB, and {TIP4P-FB} Water Models"},
  journal      = {J. Chem. Inf. Model.},
  volume       = {61},
  number       = {7},
  pages        = {3734--3735},
  year         = {2021},
  url          = {https://doi.org/10.1021/acs.jcim.1c00576},
  doi          = {10.1021/ACS.JCIM.1C00576},
  timestamp    = {Thu, 16 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Sengupta0S0M21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzFW20,
  author       = {Kenneth M. Merz Jr. and
                  Gianni De Fabritiis and
                  Guo{-}Wei Wei},
  title        = {{JCIM} Special Issue on Generative Models for Molecular Design},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {3},
  pages        = {1072},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00180},
  doi          = {10.1021/ACS.JCIM.0C00180},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzFW20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/BurrowsWKMSLLKJ20,
  author       = {Cynthia J. Burrows and
                  Shu Wang and
                  Hyun Jae Kim and
                  Gerald J. Meyer and
                  Kirk Schanze and
                  T. Randall Lee and
                  Jodie L. Lutkenhaus and
                  David Kaplan and
                  Christopher Jones and
                  Carolyn R. Bertozzi and
                  Laura Kiessling and
                  Mary Beth Mulcahy and
                  Craig Lindsley and
                  M. G. Finn and
                  Joel D. Blum and
                  Prashant Kamat and
                  Courtney Aldrich and
                  Stuart Rowan and
                  Bin Liu and
                  Dennis Liotta and
                  Paul S. Weiss and
                  Deqing Zhang and
                  Krishna N. Ganesh and
                  Patrick M. Sexton and
                  Harry A. Atwater and
                  J. Justin Gooding and
                  David T. Allen and
                  Christopher A. Voigt and
                  Jonathan V. Sweedler and
                  Alanna Schepartz and
                  Vincent Rotello and
                  S{\'{e}}bastien Lecommandoux and
                  Shana J. Sturla and
                  Sharon Hammes{-}Schiffer and
                  Jillian Buriak and
                  Jonathan W. Steed and
                  Hongwei Wu and
                  Julie Zimmerman and
                  Bryan Brooks and
                  Phillip Savage and
                  William Tolman and
                  Thomas F. Hofmann and
                  Joan F. Brennecke and
                  Thomas A. Holme and
                  Kenneth M. Merz Jr. and
                  Gustavo Scuseria and
                  William Jorgensen and
                  Gunda I. Georg and
                  Shaomeng Wang and
                  Philip Proteau and
                  John R. Yates and
                  Peter Stang and
                  Gilbert C. Walker and
                  Marc Hillmyer and
                  Lynne S. Taylor and
                  Teri W. Odom and
                  Erick Carreira and
                  Kai Rossen and
                  Paul Chirik and
                  Scott J. Miller and
                  Anne McCoy and
                  Joan{-}Emma Shea and
                  Martin Zanni and
                  Catherine Murphy and
                  Gregory Scholes and
                  Joseph A. Loo},
  title        = {Update to Our Reader, Reviewer, and Author Communities - April 2020},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {6},
  pages        = {2651--2652},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00399},
  doi          = {10.1021/ACS.JCIM.0C00399},
  timestamp    = {Sun, 04 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/BurrowsWKMSLLKJ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/BurrowsHWKMSLLK20,
  author       = {Cynthia J. Burrows and
                  Jiaxing Huang and
                  Shu Wang and
                  Hyun Jae Kim and
                  Gerald J. Meyer and
                  Kirk Schanze and
                  T. Randall Lee and
                  Jodie L. Lutkenhaus and
                  David Kaplan and
                  Christopher Jones and
                  Carolyn R. Bertozzi and
                  Laura Kiessling and
                  Mary Beth Mulcahy and
                  Craig Lindsley and
                  M. G. Finn and
                  Joel D. Blum and
                  Prashant Kamat and
                  Wonyong Choi and
                  Shane Snyder and
                  Courtney Aldrich and
                  Stuart Rowan and
                  Bin Liu and
                  Dennis Liotta and
                  Paul S. Weiss and
                  Deqing Zhang and
                  Krishna N. Ganesh and
                  Harry A. Atwater and
                  J. Justin Gooding and
                  David T. Allen and
                  Christopher A. Voigt and
                  Jonathan V. Sweedler and
                  Alanna Schepartz and
                  Vincent Rotello and
                  S{\'{e}}bastien Lecommandoux and
                  Shana J. Sturla and
                  Sharon Hammes{-}Schiffer and
                  Jillian Buriak and
                  Jonathan W. Steed and
                  Hongwei Wu and
                  Julie Zimmerman and
                  Bryan Brooks and
                  Phillip Savage and
                  William Tolman and
                  Thomas F. Hofmann and
                  Joan F. Brennecke and
                  Thomas A. Holme and
                  Kenneth M. Merz Jr. and
                  Gustavo Scuseria and
                  William Jorgensen and
                  Gunda I. Georg and
                  Shaomeng Wang and
                  Philip Proteau and
                  John R. Yates and
                  Peter Stang and
                  Gilbert C. Walker and
                  Marc Hillmyer and
                  Lynne S. Taylor and
                  Teri W. Odom and
                  Erick Carreira and
                  Kai Rossen and
                  Paul Chirik and
                  Scott J. Miller and
                  Joan{-}Emma Shea and
                  Anne McCoy and
                  Martin Zanni and
                  Gregory Hartland and
                  Gregory Scholes and
                  Joseph A. Loo and
                  James Milne and
                  Sarah B. Tegen and
                  Daniel T. Kulp and
                  Julia Laskin},
  title        = {Confronting Racism in Chemistry Journals},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {7},
  pages        = {3325--3327},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00683},
  doi          = {10.1021/ACS.JCIM.0C00683},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/BurrowsHWKMSLLK20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MazzolariNWACM20,
  author       = {Angelica Mazzolari and
                  Ariane Nunes{-}Alves and
                  Habibah A. Wahab and
                  Rommie E. Amaro and
                  Zoe Cournia and
                  Kenneth M. Merz Jr.},
  title        = {Impact of the Journal of Chemical Information and Modeling Special
                  Issue on Women in Computational Chemistry},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {7},
  pages        = {3328--3330},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00636},
  doi          = {10.1021/ACS.JCIM.0C00636},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MazzolariNWACM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SahrmannDMMG20,
  author       = {Patrick G. Sahrmann and
                  Patrick H. Donnan and
                  Kenneth M. Merz Jr. and
                  Steven O. Mansoorabadi and
                  Douglas C. Goodwin},
  title        = {MRP.py: {A} Parametrizer of Post-Translationally Modified Residues},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {10},
  pages        = {4424--4428},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00472},
  doi          = {10.1021/ACS.JCIM.0C00472},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/SahrmannDMMG20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/TsaiTLMY20,
  author       = {Hsu{-}Chun Tsai and
                  Yujun Tao and
                  Tai{-}Sung Lee and
                  Kenneth M. Merz Jr. and
                  Darrin M. York},
  title        = {Validation of Free Energy Methods in {AMBER}},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {11},
  pages        = {5296--5300},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00285},
  doi          = {10.1021/ACS.JCIM.0C00285},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/TsaiTLMY20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SongM20,
  author       = {Lin Frank Song and
                  Kenneth M. Merz Jr.},
  title        = {Evolution of Alchemical Free Energy Methods in Drug Discovery},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {11},
  pages        = {5308--5318},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c00547},
  doi          = {10.1021/ACS.JCIM.0C00547},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/SongM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzFW20a,
  author       = {Kenneth M. Merz Jr. and
                  Gianni De Fabritiis and
                  Guo{-}Wei Wei},
  title        = {Generative Models for Molecular Design},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {12},
  pages        = {5635--5636},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c01388},
  doi          = {10.1021/ACS.JCIM.0C01388},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzFW20a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Nunes-AlvesMM20,
  author       = {Ariane Nunes{-}Alves and
                  Angelica Mazzolari and
                  Kenneth M. Merz Jr.},
  title        = {What Makes a Paper Be Highly Cited? 60 Years of the Journal of Chemical
                  Information and Modeling},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {12},
  pages        = {5866--5867},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c01248},
  doi          = {10.1021/ACS.JCIM.0C01248},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Nunes-AlvesMM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzACRSTWW20,
  author       = {Kenneth M. Merz Jr. and
                  Rommie E. Amaro and
                  Zoe Cournia and
                  Matthias Rarey and
                  Thereza A. Soares and
                  Alexander Tropsha and
                  Habibah A. Wahab and
                  Renxiao Wang},
  title        = {Editorial: Method and Data Sharing and Reproducibility of Scientific
                  Results},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {12},
  pages        = {5868--5869},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c01389},
  doi          = {10.1021/ACS.JCIM.0C01389},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzACRSTWW20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ZhaoKCMC20,
  author       = {Wenxi Zhao and
                  Dmitriy Korobskiy and
                  Shreya Chandrasekharan and
                  Kenneth M. Merz Jr. and
                  George Chacko},
  title        = {Converging Interests: Chemoinformatics, History, and Bibliometrics},
  journal      = {J. Chem. Inf. Model.},
  volume       = {60},
  number       = {12},
  pages        = {5870--5872},
  year         = {2020},
  url          = {https://doi.org/10.1021/acs.jcim.0c01098},
  doi          = {10.1021/ACS.JCIM.0C01098},
  timestamp    = {Wed, 01 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/ZhaoKCMC20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/PeiZM19,
  author       = {Jun Pei and
                  Zheng Zheng and
                  Kenneth M. Merz Jr.},
  title        = {Random Forest Refinement of the {KECSA2} Knowledge-Based Scoring Function
                  for Protein Decoy Detection},
  journal      = {J. Chem. Inf. Model.},
  volume       = {59},
  number       = {5},
  pages        = {1919--1929},
  year         = {2019},
  url          = {https://doi.org/10.1021/acs.jcim.8b00734},
  doi          = {10.1021/ACS.JCIM.8B00734},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/PeiZM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SongLZYM19,
  author       = {Lin Frank Song and
                  Tai{-}Sung Lee and
                  Chun Zhu and
                  Darrin M. York and
                  Kenneth M. Merz Jr.},
  title        = {Using {AMBER18} for Relative Free Energy Calculations},
  journal      = {J. Chem. Inf. Model.},
  volume       = {59},
  number       = {7},
  pages        = {3128--3135},
  year         = {2019},
  url          = {https://doi.org/10.1021/acs.jcim.9b00105},
  doi          = {10.1021/ACS.JCIM.9B00105},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/SongLZYM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/PeiZKSWMM19,
  author       = {Jun Pei and
                  Zheng Zheng and
                  Hyunji Kim and
                  Lin Frank Song and
                  Sarah Walworth and
                  Margaux R. Merz and
                  Kenneth M. Merz Jr.},
  title        = {Random Forest Refinement of Pairwise Potentials for Protein-Ligand
                  Decoy Detection},
  journal      = {J. Chem. Inf. Model.},
  volume       = {59},
  number       = {7},
  pages        = {3305--3315},
  year         = {2019},
  url          = {https://doi.org/10.1021/acs.jcim.9b00356},
  doi          = {10.1021/ACS.JCIM.9B00356},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/PeiZKSWMM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/SongBZM18,
  author       = {Lin Frank Song and
                  Nupur Bansal and
                  Zheng Zheng and
                  Kenneth M. Merz Jr.},
  title        = {Detailed potential of mean force studies on host-guest systems from
                  the {SAMPL6} challenge},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {32},
  number       = {10},
  pages        = {1013--1026},
  year         = {2018},
  url          = {https://doi.org/10.1007/s10822-018-0153-7},
  doi          = {10.1007/S10822-018-0153-7},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/SongBZM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Merz18,
  author       = {Kenneth M. Merz Jr.},
  title        = {Investing in the Future},
  journal      = {J. Chem. Inf. Model.},
  volume       = {58},
  number       = {6},
  pages        = {1153},
  year         = {2018},
  url          = {https://doi.org/10.1021/acs.jcim.8b00360},
  doi          = {10.1021/ACS.JCIM.8B00360},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Merz18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/BansalZCM17,
  author       = {Nupur Bansal and
                  Zheng Zheng and
                  David S. Cerutti and
                  Kenneth M. Merz Jr.},
  title        = {On the fly estimation of host-guest binding free energies using the
                  movable type method: participation in the {SAMPL5} blind challenge},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {31},
  number       = {1},
  pages        = {47--60},
  year         = {2017},
  url          = {https://doi.org/10.1007/s10822-016-9980-6},
  doi          = {10.1007/S10822-016-9980-6},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/BansalZCM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/AldrichBGKLLMSW17,
  author       = {Courtney Aldrich and
                  Carolyn R. Bertozzi and
                  Gunda I. Georg and
                  Laura Kiessling and
                  Craig Lindsley and
                  Dennis Liotta and
                  Kenneth M. Merz Jr. and
                  Alanna Schepartz and
                  Shaomeng Wang},
  title        = {The Ecstasy and Agony of Assay Interference Compounds},
  journal      = {J. Chem. Inf. Model.},
  volume       = {57},
  number       = {3},
  pages        = {387--390},
  year         = {2017},
  url          = {https://doi.org/10.1021/acs.jcim.7b00105},
  doi          = {10.1021/ACS.JCIM.7B00105},
  timestamp    = {Tue, 23 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/AldrichBGKLLMSW17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LiM16,
  author       = {Pengfei Li and
                  Kenneth M. Merz Jr.},
  title        = {MCPB.py: {A} Python Based Metal Center Parameter Builder},
  journal      = {J. Chem. Inf. Model.},
  volume       = {56},
  number       = {4},
  pages        = {599--604},
  year         = {2016},
  url          = {https://doi.org/10.1021/acs.jcim.5b00674},
  doi          = {10.1021/ACS.JCIM.5B00674},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/LiM16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MacomberMHM15,
  author       = {Lee Macomber and
                  Mona S. Minkara and
                  Robert P. Hausinger and
                  Kenneth M. Merz Jr.},
  title        = {Reduction of Urease Activity by Interaction with the Flap Covering
                  the Active Site},
  journal      = {J. Chem. Inf. Model.},
  volume       = {55},
  number       = {2},
  pages        = {354--361},
  year         = {2015},
  url          = {https://doi.org/10.1021/ci500562t},
  doi          = {10.1021/CI500562T},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MacomberMHM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerzRTW15,
  author       = {Kenneth M. Merz Jr. and
                  Matthias Rarey and
                  Alexander Tropsha and
                  Habibah A. Wahab},
  title        = {Letter from the Editors},
  journal      = {J. Chem. Inf. Model.},
  volume       = {55},
  number       = {4},
  pages        = {719--720},
  year         = {2015},
  url          = {https://doi.org/10.1021/acs.jcim.5b00180},
  doi          = {10.1021/ACS.JCIM.5B00180},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/MerzRTW15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Merz15,
  author       = {Kenneth M. Merz Jr.},
  title        = {Introducing the Review Manuscript Type},
  journal      = {J. Chem. Inf. Model.},
  volume       = {55},
  number       = {7},
  pages        = {1291},
  year         = {2015},
  url          = {https://doi.org/10.1021/acs.jcim.5b00406},
  doi          = {10.1021/ACS.JCIM.5B00406},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Merz15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Merz14,
  author       = {Kenneth M. Merz Jr.},
  title        = {New Manuscript Type: Application Note},
  journal      = {J. Chem. Inf. Model.},
  volume       = {54},
  number       = {11},
  pages        = {3045},
  year         = {2014},
  url          = {https://doi.org/10.1021/ci500685s},
  doi          = {10.1021/CI500685S},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/Merz14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ZhengM13,
  author       = {Zheng Zheng and
                  Kenneth M. Merz Jr.},
  title        = {Development of the Knowledge-Based and Empirical Combined Scoring
                  Algorithm {(KECSA)} To Score Protein-Ligand Interactions},
  journal      = {J. Chem. Inf. Model.},
  volume       = {53},
  number       = {5},
  pages        = {1073--1083},
  year         = {2013},
  url          = {https://doi.org/10.1021/ci300619x},
  doi          = {10.1021/CI300619X},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/ZhengM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/BensonFUDZM12,
  author       = {Mark L. Benson and
                  John C. Faver and
                  Melek N. Ucisik and
                  Danial S. Dashti and
                  Zheng Zheng and
                  Kenneth M. Merz Jr.},
  title        = {Prediction of trypsin/molecular fragment binding affinities by free
                  energy decomposition and empirical scores},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {26},
  number       = {5},
  pages        = {647--659},
  year         = {2012},
  url          = {https://doi.org/10.1007/s10822-012-9567-9},
  doi          = {10.1007/S10822-012-9567-9},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/BensonFUDZM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/LiFM12,
  author       = {Xue Li and
                  Zheng Fu and
                  Kenneth M. Merz Jr.},
  title        = {{QM/MM} refinement and analysis of protein bound retinoic acid},
  journal      = {J. Comput. Chem.},
  volume       = {33},
  number       = {3},
  pages        = {301--310},
  year         = {2012},
  url          = {https://doi.org/10.1002/jcc.21978},
  doi          = {10.1002/JCC.21978},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/LiFM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/RobertsSRMDTT12,
  author       = {Benjamin P. Roberts and
                  Gustavo de M. Seabra and
                  Adrian E. Roitberg and
                  Kenneth M. Merz Jr. and
                  Erik Deumens and
                  Juan Torras and
                  Samuel B. Trickey},
  title        = {Comment on "a minimal implementation of the {AMBER-GAUSSIAN}
                  interface for \emph{Ab Initio} {QM/MM-MD} simulation"},
  journal      = {J. Comput. Chem.},
  volume       = {33},
  number       = {19},
  pages        = {1643--1644},
  year         = {2012},
  url          = {https://doi.org/10.1002/jcc.23003},
  doi          = {10.1002/JCC.23003},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/RobertsSRMDTT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/FuLM11,
  author       = {Zheng Fu and
                  Xue Li and
                  Kenneth M. Merz Jr.},
  title        = {Accurate assessment of the strain energy in a protein-bound drug using
                  {QM/MM} X-ray refinement and converged quantum chemistry},
  journal      = {J. Comput. Chem.},
  volume       = {32},
  number       = {12},
  pages        = {2587--2597},
  year         = {2011},
  url          = {https://doi.org/10.1002/jcc.21838},
  doi          = {10.1002/JCC.21838},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/FuLM11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ZhengM11,
  author       = {Zheng Zheng and
                  Kenneth M. Merz Jr.},
  title        = {Ligand Identification Scoring Algorithm {(LISA)}},
  journal      = {J. Chem. Inf. Model.},
  volume       = {51},
  number       = {6},
  pages        = {1296--1306},
  year         = {2011},
  url          = {https://doi.org/10.1021/ci2000665},
  doi          = {10.1021/CI2000665},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/ZhengM11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/EstiuSM06,
  author       = {Guillermina Estiu and
                  Dimas Su{\'{a}}rez and
                  Kenneth M. Merz Jr.},
  title        = {Quantum mechanical and molecular dynamics simulations of ureases and
                  Zn beta-lactamases},
  journal      = {J. Comput. Chem.},
  volume       = {27},
  number       = {12},
  pages        = {1240--1262},
  year         = {2006},
  url          = {https://doi.org/10.1002/jcc.20411},
  doi          = {10.1002/JCC.20411},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/EstiuSM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/DixonMLI05,
  author       = {Steven L. Dixon and
                  Kenneth M. Merz Jr. and
                  Giorgio Lauri and
                  James C. Ianni},
  title        = {{QMQSAR:} Utilization of a semiempirical probe potential in a field-based
                  {QSAR} method},
  journal      = {J. Comput. Chem.},
  volume       = {26},
  number       = {1},
  pages        = {23--34},
  year         = {2005},
  url          = {https://doi.org/10.1002/jcc.20142},
  doi          = {10.1002/JCC.20142},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/DixonMLI05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/CaseCDGLMOSWW05,
  author       = {David A. Case and
                  Thomas E. Cheatham III and
                  Tom Darden and
                  Holger Gohlke and
                  Ray Luo and
                  Kenneth M. Merz Jr. and
                  Alexey Onufriev and
                  Carlos Simmerling and
                  Bing Wang and
                  Robert J. Woods},
  title        = {The Amber biomolecular simulation programs},
  journal      = {J. Comput. Chem.},
  volume       = {26},
  number       = {16},
  pages        = {1668--1688},
  year         = {2005},
  url          = {https://doi.org/10.1002/jcc.20290},
  doi          = {10.1002/JCC.20290},
  timestamp    = {Mon, 24 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/CaseCDGLMOSWW05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/BrothersSDM04,
  author       = {Edward N. Brothers and
                  Dimas Su{\'{a}}rez and
                  David W. Deerfield II and
                  Kenneth M. Merz Jr.},
  title        = {PM3-compatible zinc parameters optimized for metalloenzyme active
                  sites},
  journal      = {J. Comput. Chem.},
  volume       = {25},
  number       = {14},
  pages        = {1677--1692},
  year         = {2004},
  url          = {https://doi.org/10.1002/jcc.20086},
  doi          = {10.1002/JCC.20086},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/BrothersSDM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/DillerM02,
  author       = {David J. Diller and
                  Kenneth M. Merz Jr.},
  title        = {Can we separate active from inactive conformations?},
  journal      = {J. Comput. Aided Mol. Des.},
  volume       = {16},
  number       = {2},
  pages        = {105--112},
  year         = {2002},
  url          = {https://doi.org/10.1023/A:1016320106741},
  doi          = {10.1023/A:1016320106741},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcamd/DillerM02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/ChengDDELM02,
  author       = {Ailan Cheng and
                  David J. Diller and
                  Steven L. Dixon and
                  William J. Egan and
                  George Lauri and
                  Kenneth M. Merz Jr.},
  title        = {Computation of the physio-chemical properties and data mining of large
                  molecular collections},
  journal      = {J. Comput. Chem.},
  volume       = {23},
  number       = {1},
  pages        = {172--183},
  year         = {2002},
  url          = {https://doi.org/10.1002/jcc.1164},
  doi          = {10.1002/JCC.1164},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/ChengDDELM02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/SuarezDM02,
  author       = {Dimas Su{\'{a}}rez and
                  Natalia D{\'{\i}}az and
                  Kenneth M. Merz Jr.},
  title        = {Molecular dynamics simulations of the dinuclear zinc--lactamase from
                  Bacteroides fragilis complexed with imipenem},
  journal      = {J. Comput. Chem.},
  volume       = {23},
  number       = {16},
  pages        = {1587--1600},
  year         = {2002},
  url          = {https://doi.org/10.1002/jcc.10157},
  doi          = {10.1002/JCC.10157},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/SuarezDM02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/VaartGDJ00,
  author       = {Arjan van der Vaart and
                  Valentin Gogonea and
                  Steven L. Dixon and
                  Kenneth M. Merz Jr.},
  title        = {Linear scaling molecular orbital calculations of biological systems
                  using the semiempirical divide and conquer method},
  journal      = {J. Comput. Chem.},
  volume       = {21},
  number       = {16},
  pages        = {1494--1504},
  year         = {2000},
  url          = {https://doi.org/10.1002/1096-987X(200012)21:16\&\#60;1494::AID-JCC6\&\#62;3.0.CO;2-4},
  doi          = {10.1002/1096-987X(200012)21:16\&\#60;1494::AID-JCC6\&\#62;3.0.CO;2-4},
  timestamp    = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/VaartGDJ00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/StantonHM95,
  author       = {Robert V. Stanton and
                  David S. Hartsough and
                  Kenneth M. Merz Jr.},
  title        = {An Examination of a Density Functional/Molecular Mechanical Coupled
                  Potential},
  journal      = {J. Comput. Chem.},
  volume       = {16},
  number       = {1},
  pages        = {113--128},
  year         = {1995},
  url          = {https://doi.org/10.1002/jcc.540160110},
  doi          = {10.1002/JCC.540160110},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/StantonHM95.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/VincentM95,
  author       = {James J. Vincent and
                  Kenneth M. Merz Jr.},
  title        = {A Highly Portable Parallel Implementation of {AMBER4} Using the Message
                  Passing Interface Standart},
  journal      = {J. Comput. Chem.},
  volume       = {16},
  number       = {11},
  pages        = {1420--1427},
  year         = {1995},
  url          = {https://doi.org/10.1002/jcc.540161110},
  doi          = {10.1002/JCC.540161110},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/VincentM95.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/GlennonZGSM94,
  author       = {Timothy M. Glennon and
                  Yajun Zheng and
                  Scott M. Le Grand and
                  Brad A. Shutzberg and
                  Kenneth M. Merz Jr.},
  title        = {A Force Field for Monosaccharides and (1-{\textgreater}4) Linked Polysaccharides},
  journal      = {J. Comput. Chem.},
  volume       = {15},
  number       = {9},
  pages        = {1019--1040},
  year         = {1994},
  url          = {https://doi.org/10.1002/jcc.540150910},
  doi          = {10.1002/JCC.540150910},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/GlennonZGSM94.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/GrandM93,
  author       = {Scott M. Le Grand and
                  Kenneth M. Merz Jr.},
  title        = {Rapid approximation to molecular surface area via the use of Boolean
                  logic and look-up tables},
  journal      = {J. Comput. Chem.},
  volume       = {14},
  number       = {3},
  pages        = {349--352},
  year         = {1993},
  url          = {https://doi.org/10.1002/jcc.540140309},
  doi          = {10.1002/JCC.540140309},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/GrandM93.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgo/GrandM93,
  author       = {Scott M. Le Grand and
                  Kenneth M. Merz Jr.},
  title        = {The application of the genetic algorithm to the minimization of potential
                  energy functions},
  journal      = {J. Glob. Optim.},
  volume       = {3},
  number       = {1},
  pages        = {49--66},
  year         = {1993},
  url          = {https://doi.org/10.1007/BF01100239},
  doi          = {10.1007/BF01100239},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jgo/GrandM93.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}