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ORCIDBibTeX records: Aron Marchler-Bauer
@article{DBLP:journals/nar/SayersBBCCCFFFFHKKKKLLLMMMMPPRSTWYT23,
author = {Eric W. Sayers and
Evan E. Bolton and
J. Rodney Brister and
Kathi Canese and
Jessica Chan and
Donald C. Comeau and
Catherine M. Farrell and
Michael Feldgarden and
Anna M. Fine and
Kathryn Funk and
Eneida Hatcher and
Sivakumar Kannan and
Christopher Kelly and
Sunghwan Kim and
William Klimke and
Melissa J. Landrum and
Stacy Lathrop and
Zhiyong Lu and
Thomas L. Madden and
Adriana J. Malheiro and
Aron Marchler{-}Bauer and
Terence D. Murphy and
Lon Phan and
Shashikant Pujar and
Sanjida H. Rangwala and
Valerie A. Schneider and
Tony Tse and
Jiyao Wang and
Jian Ye and
Barton W. Trawick and
Kim D. Pruitt and
Stephen T. Sherry},
title = {Database resources of the National Center for Biotechnology Information
in 2023},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {29--38},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac1032},
doi = {10.1093/NAR/GKAC1032},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBCCCFFFFHKKKKLLLMMMMPPRSTWYT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangCDGGLMSTYYZZLM23,
author = {Jiyao Wang and
Farideh Chitsaz and
Myra K. Derbyshire and
Noreen R. Gonzales and
Marc Gwadz and
Shennan Lu and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Mingzhang Yang and
Dachuan Zhang and
Chanjuan Zheng and
Christopher J. Lanczycki and
Aron Marchler{-}Bauer},
title = {The conserved domain database in 2023},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {384--388},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac1096},
doi = {10.1093/NAR/GKAC1096},
timestamp = {Fri, 18 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangCDGGLMSTYYZZLM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PaysanLafosseBCGPSBBBCGHLMMNOPRSSTT23,
author = {Typhaine Paysan{-}Lafosse and
Matthias Blum and
Sara Chuguransky and
Tiago Grego and
Beatriz L{\'{a}}zaro Pinto and
Gustavo A. Salazar and
Maxwell L. Bileschi and
Peer Bork and
Alan J. Bridge and
Lucy J. Colwell and
Julian Gough and
Daniel H. Haft and
Ivica Letunic and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Christine A. Orengo and
Arun Prasad Pandurangan and
Catherine Rivoire and
Christian J. A. Sigrist and
Ian Sillitoe and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Alex Bateman},
title = {InterPro in 2022},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {418--427},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac993},
doi = {10.1093/NAR/GKAC993},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/PaysanLafosseBCGPSBBBCGHLMMNOPRSSTT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Crecy-LagardHAB22,
author = {Val{\'{e}}rie de Cr{\'{e}}cy{-}Lagard and
Rocio Amorin de Hegedus and
Cecilia N. Arighi and
Jill Babor and
Alex Bateman and
Ian Blaby and
Crysten Blaby{-}Haas and
Alan J. Bridge and
Stephen K. Burley and
Stacey Cleveland and
Lucy J. Colwell and
Ana Conesa and
Christian Dallago and
Antoine Danchin and
Anita de Waard and
Adam Deutschbauer and
Raquel Dias and
Yousong Ding and
Gang Fang and
Iddo Friedberg and
John Gerlt and
Joshua Goldford and
Mark Gorelik and
Benjamin M. Gyori and
Christopher S. Henry and
Geoffrey Hutinet and
Marshall Jaroch and
Peter D. Karp and
Liudmyla Kondratova and
Zhiyong Lu and
Aron Marchler{-}Bauer and
Maria Jesus Martin and
Claire D. McWhite and
Gaurav D. Moghe and
Paul Monaghan and
Anne Morgat and
Christopher J. Mungall and
Darren A. Natale and
William C. Nelson and
Se{\'{a}}n I. O'Donoghue and
Christine A. Orengo and
Katherine H. O'Toole and
Predrag Radivojac and
Colbie Reed and
Richard J. Roberts and
Dmitri Rodionov and
Irina A. Rodionova and
Jeffrey DePons and
Lana Saleh and
Gloria M. Sheynkman and
Fran{\c{c}}oise Thibaud{-}Nissen and
Paul D. Thomas and
Peter Uetz and
David Vallenet and
Erica Watson Carter and
Peter Weigele and
Valerie Wood and
Elisha M. Wood{-}Charlson and
Jin Xu},
title = {A roadmap for the functional annotation of protein families: a community
perspective},
journal = {Database J. Biol. Databases Curation},
volume = {2022},
number = {2022},
year = {2022},
url = {https://doi.org/10.1093/database/baac062},
doi = {10.1093/DATABASE/BAAC062},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Crecy-LagardHAB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBCCCCFKK22,
author = {Eric W. Sayers and
Evan E. Bolton and
J. Rodney Brister and
Kathi Canese and
Jessica Chan and
Donald C. Comeau and
Ryan Connor and
Kathryn Funk and
Chris Kelly and
Sunghwan Kim and
Tom Madej and
Aron Marchler{-}Bauer and
Christopher J. Lanczycki and
Stacy Lathrop and
Zhiyong Lu and
Fran{\c{c}}oise Thibaud{-}Nissen and
Terence D. Murphy and
Lon Phan and
Yuri Skripchenko and
Tony Tse and
Jiyao Wang and
Rebecca Williams and
Barton W. Trawick and
Kim D. Pruitt and
Stephen T. Sherry},
title = {Database resources of the national center for biotechnology information},
journal = {Nucleic Acids Res.},
volume = {50},
number = {{D1}},
pages = {20--26},
year = {2022},
url = {https://doi.org/10.1093/nar/gkab1112},
doi = {10.1093/NAR/GKAB1112},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBCCCCFKK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBBBCCF0K21,
author = {Eric W. Sayers and
Jeffrey Beck and
Evan Bolton and
Devon Bourexis and
James R. Brister and
Kathi Canese and
Donald C. Comeau and
Kathryn Funk and
Sunghwan Kim and
William Klimke and
Aron Marchler{-}Bauer and
Melissa J. Landrum and
Stacy Lathrop and
Zhiyong Lu and
Thomas L. Madden and
Nuala A. O'Leary and
Lon Phan and
Sanjida H. Rangwala and
Valerie A. Schneider and
Yuri Skripchenko and
Jiyao Wang and
Jian Ye and
Barton W. Trawick and
Kim D. Pruitt and
Stephen T. Sherry},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D10--D17},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa892},
doi = {10.1093/NAR/GKAA892},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBBBCCF0K21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiOHDCBCCDDGGLS21,
author = {Wenjun Li and
Kathleen O'Neill and
Daniel H. Haft and
Michael DiCuccio and
Vyacheslav Chetvernin and
Azat Badretdin and
George Coulouris and
Farideh Chitsaz and
Myra K. Derbyshire and
A. Scott Durkin and
Noreen R. Gonzales and
Marc Gwadz and
Christopher J. Lanczycki and
James S. Song and
Narmada Thanki and
Jiyao Wang and
Roxanne A. Yamashita and
Mingzhang Yang and
Chanjuan Zheng and
Aron Marchler{-}Bauer and
Fran{\c{c}}oise Thibaud{-}Nissen},
title = {RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach
with protein family model curation},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D1020--D1028},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa1105},
doi = {10.1093/NAR/GKAA1105},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/LiOHDCBCCDDGGLS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlumCCGKMNPQRRS21,
author = {Matthias Blum and
Hsin{-}Yu Chang and
Sara Chuguransky and
Tiago Grego and
Swaathi Kandasamy and
Alex L. Mitchell and
Gift Nuka and
Typhaine Paysan{-}Lafosse and
Matloob Qureshi and
Shriya Raj and
Lorna J. Richardson and
Gustavo A. Salazar and
Lowri Williams and
Peer Bork and
Alan J. Bridge and
Julian Gough and
Daniel H. Haft and
Ivica Letunic and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Marco Necci and
Christine A. Orengo and
Arun Prasad Pandurangan and
Catherine Rivoire and
Christian J. A. Sigrist and
Ian Sillitoe and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Alex Bateman and
Robert D. Finn},
title = {The InterPro protein families and domains database: 20 years on},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D344--D354},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa977},
doi = {10.1093/NAR/GKAA977},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BlumCCGKMNPQRRS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NeuwaldLHM20,
author = {Andrew F. Neuwald and
Christopher J. Lanczycki and
Theresa K. Hodges and
Aron Marchler{-}Bauer},
title = {Obtaining extremely large and accurate protein multiple sequence alignments
from curated hierarchical alignments},
journal = {Database J. Biol. Databases Curation},
volume = {2020},
year = {2020},
url = {https://doi.org/10.1093/database/baaa042},
doi = {10.1093/DATABASE/BAAA042},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NeuwaldLHM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangYZLGMPWLMWB20,
author = {Jiyao Wang and
Philippe Youkharibache and
Dachuan Zhang and
Christopher J. Lanczycki and
Renata C. Geer and
Thomas Madej and
Lon Phan and
Minghong Ward and
Shennan Lu and
Gabriele H. Marchler and
Yanli Wang and
Stephen H. Bryant and
Lewis Y. Geer and
Aron Marchler{-}Bauer},
title = {iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations
of biomolecular structures},
journal = {Bioinform.},
volume = {36},
number = {1},
pages = {131--135},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btz502},
doi = {10.1093/BIOINFORMATICS/BTZ502},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangYZLGMPWLMWB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LuWCDGGGHMSTYYZ20,
author = {Shennan Lu and
Jiyao Wang and
Farideh Chitsaz and
Myra K. Derbyshire and
Renata C. Geer and
Noreen R. Gonzales and
Marc Gwadz and
David I. Hurwitz and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Mingzhang Yang and
Dachuan Zhang and
Chanjuan Zheng and
Christopher J. Lanczycki and
Aron Marchler{-}Bauer},
title = {{CDD/SPARCLE:} the conserved domain database in 2020},
journal = {Nucleic Acids Res.},
volume = {48},
number = {Database-Issue},
pages = {D265--D268},
year = {2020},
url = {https://doi.org/10.1093/nar/gkz991},
doi = {10.1093/NAR/GKZ991},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LuWCDGGGHMSTYYZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DoganWXGTYZML19,
author = {Rezarta Islamaj Dogan and
W. John Wilbur and
Natalie Xie and
Noreen R. Gonzales and
Narmada Thanki and
Roxanne A. Yamashita and
Chanjuan Zheng and
Aron Marchler{-}Bauer and
Zhiyong Lu},
title = {PubMed Text Similarity Model and its application to curation efforts
in the Conserved Domain Database},
journal = {Database J. Biol. Databases Curation},
volume = {2019},
pages = {baz064},
year = {2019},
url = {https://doi.org/10.1093/database/baz064},
doi = {10.1093/DATABASE/BAZ064},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/DoganWXGTYZML19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersABBCCCFFH19,
author = {Eric W. Sayers and
Richa Agarwala and
Evan Bolton and
J. Rodney Brister and
Kathi Canese and
Karen Clark and
Ryan Connor and
Nicolas Fiorini and
Kathryn Funk and
Timothy Hefferon and
J. Bradley Holmes and
Sunghwan Kim and
Avi Kimchi and
Paul A. Kitts and
Stacy Lathrop and
Zhiyong Lu and
Thomas L. Madden and
Aron Marchler{-}Bauer and
Lon Phan and
Valerie A. Schneider and
Conrad L. Schoch and
Kim D. Pruitt and
James Ostell},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {47},
number = {Database-Issue},
pages = {D23--D28},
year = {2019},
url = {https://doi.org/10.1093/nar/gky1069},
doi = {10.1093/NAR/GKY1069},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/SayersABBCCCFFH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MitchellABBBBBC19,
author = {Alex L. Mitchell and
Teresa K. Attwood and
Patricia C. Babbitt and
Matthias Blum and
Peer Bork and
Alan J. Bridge and
Shoshana D. Brown and
Hsin{-}Yu Chang and
Sara El{-}Gebali and
Matthew Fraser and
Julian Gough and
David Haft and
Hongzhan Huang and
Ivica Letunic and
Rodrigo Lopez and
Aurelien Luciani and
F{\'{a}}bio Madeira and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Marco Necci and
Gift Nuka and
Christine A. Orengo and
Arun Prasad Pandurangan and
Typhaine Paysan{-}Lafosse and
Sebastien Pesseat and
Simon C. Potter and
Matloob Qureshi and
Neil D. Rawlings and
Nicole Redaschi and
Lorna J. Richardson and
Catherine Rivoire and
Gustavo A. Salazar and
Amaia Sangrador{-}Vegas and
Christian J. A. Sigrist and
Ian Sillitoe and
Granger G. Sutton and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Siew{-}Yit Yong and
Robert D. Finn},
title = {InterPro in 2019: improving coverage, classification and access to
protein sequence annotations},
journal = {Nucleic Acids Res.},
volume = {47},
number = {Database-Issue},
pages = {D351--D360},
year = {2019},
url = {https://doi.org/10.1093/nar/gky1100},
doi = {10.1093/NAR/GKY1100},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MitchellABBBBBC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HaftDBBCOLCDGGL18,
author = {Daniel H. Haft and
Michael DiCuccio and
Azat Badretdin and
Vyacheslav Brover and
Vyacheslav Chetvernin and
Kathleen O'Neill and
Wenjun Li and
Farideh Chitsaz and
Myra K. Derbyshire and
Noreen R. Gonzales and
Marc Gwadz and
Fu Lu and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Chanjuan Zheng and
Fran{\c{c}}oise Thibaud{-}Nissen and
Lewis Y. Geer and
Aron Marchler{-}Bauer and
Kim D. Pruitt},
title = {RefSeq: an update on prokaryotic genome annotation and curation},
journal = {Nucleic Acids Res.},
volume = {46},
number = {Database-Issue},
pages = {D851--D860},
year = {2018},
url = {https://doi.org/10.1093/nar/gkx1068},
doi = {10.1093/NAR/GKX1068},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HaftDBBCOLCDGGL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FinnABBBBCDEFGH17,
author = {Robert D. Finn and
Teresa K. Attwood and
Patricia C. Babbitt and
Alex Bateman and
Peer Bork and
Alan J. Bridge and
Hsin{-}Yu Chang and
Zsuzsanna Doszt{\'{a}}nyi and
Sara El{-}Gebali and
Matthew Fraser and
Julian Gough and
David Haft and
Gemma L. Holliday and
Hongzhan Huang and
Xiaosong Huang and
Ivica Letunic and
Rodrigo Lopez and
Shennan Lu and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Jaina Mistry and
Darren A. Natale and
Marco Necci and
Gift Nuka and
Christine A. Orengo and
Young Mi Park and
Sebastien Pesseat and
Damiano Piovesan and
Simon C. Potter and
Neil D. Rawlings and
Nicole Redaschi and
Lorna J. Richardson and
Catherine Rivoire and
Amaia Sangrador{-}Vegas and
Christian J. A. Sigrist and
Ian Sillitoe and
Ben Smithers and
Silvano Squizzato and
Granger G. Sutton and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Ioannis Xenarios and
Lai{-}Su L. Yeh and
Siew{-}Yit Yong and
Alex L. Mitchell},
title = {InterPro in 2017 - beyond protein family and domain annotations},
journal = {Nucleic Acids Res.},
volume = {45},
number = {Database-Issue},
pages = {D190--D199},
year = {2017},
url = {https://doi.org/10.1093/nar/gkw1107},
doi = {10.1093/NAR/GKW1107},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FinnABBBBCDEFGH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerY17,
author = {Aron Marchler{-}Bauer and
Bo Yu and
Lianyi Han and
Jane He and
Christopher J. Lanczycki and
Shennan Lu and
Farideh Chitsaz and
Myra K. Derbyshire and
Renata C. Geer and
Noreen R. Gonzales and
Marc Gwadz and
David I. Hurwitz and
Fu Lu and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Zhouxi Wang and
Roxanne A. Yamashita and
Dachuan Zhang and
Chanjuan Zheng and
Lewis Y. Geer and
Stephen H. Bryant},
title = {{CDD/SPARCLE:} functional classification of proteins via subfamily
domain architectures},
journal = {Nucleic Acids Res.},
volume = {45},
number = {Database-Issue},
pages = {D200--D203},
year = {2017},
url = {https://doi.org/10.1093/nar/gkw1129},
doi = {10.1093/NAR/GKW1129},
timestamp = {Tue, 26 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DerbyshireGLHMW15,
author = {Myra K. Derbyshire and
Noreen R. Gonzales and
Shennan Lu and
Jane He and
Gabriele H. Marchler and
Zhouxi Wang and
Aron Marchler{-}Bauer},
title = {Improving the consistency of domain annotation within the Conserved
Domain Database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav012},
doi = {10.1093/DATABASE/BAV012},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DerbyshireGLHMW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MorrisWYMF15,
author = {John H. Morris and
Allan Wu and
Roxanne A. Yamashita and
Aron Marchler{-}Bauer and
Thomas E. Ferrin},
title = {cddApp: a Cytoscape app for accessing the {NCBI} conserved domain
database},
journal = {Bioinform.},
volume = {31},
number = {1},
pages = {134--136},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btu605},
doi = {10.1093/BIOINFORMATICS/BTU605},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MorrisWYMF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerDGLCGGHGHLLMSTWYZZB15,
author = {Aron Marchler{-}Bauer and
Myra K. Derbyshire and
Noreen R. Gonzales and
Shennan Lu and
Farideh Chitsaz and
Lewis Y. Geer and
Renata C. Geer and
Jane He and
Marc Gwadz and
David I. Hurwitz and
Christopher J. Lanczycki and
Fu Lu and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Zhouxi Wang and
Roxanne A. Yamashita and
Dachuan Zhang and
Chanjuan Zheng and
Stephen H. Bryant},
title = {{CDD:} NCBI's conserved domain database},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Database-Issue},
pages = {222--226},
year = {2015},
url = {https://doi.org/10.1093/nar/gku1221},
doi = {10.1093/NAR/GKU1221},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerDGLCGGHGHLLMSTWYZZB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadejLZTGMB14,
author = {Thomas Madej and
Christopher J. Lanczycki and
Dachuan Zhang and
Paul A. Thiessen and
Renata C. Geer and
Aron Marchler{-}Bauer and
Stephen H. Bryant},
title = {{MMDB} and {VAST+:} tracking structural similarities between macromolecular
complexes},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {297--303},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1208},
doi = {10.1093/NAR/GKT1208},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MadejLZTGMB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerZCDGGGGHLLLMSTYZB13,
author = {Aron Marchler{-}Bauer and
Chanjuan Zheng and
Farideh Chitsaz and
Myra K. Derbyshire and
Lewis Y. Geer and
Renata C. Geer and
Noreen R. Gonzales and
Marc Gwadz and
David I. Hurwitz and
Christopher J. Lanczycki and
Fu Lu and
Shennan Lu and
Gabriele H. Marchler and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Dachuan Zhang and
Stephen H. Bryant},
title = {{CDD:} conserved domains and protein three-dimensional structure},
journal = {Nucleic Acids Res.},
volume = {41},
number = {Database-Issue},
pages = {348--352},
year = {2013},
url = {https://doi.org/10.1093/nar/gks1243},
doi = {10.1093/NAR/GKS1243},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerZCDGGGGHLLLMSTYZB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DerbyshireLBM12,
author = {Myra K. Derbyshire and
Christopher J. Lanczycki and
Stephen H. Bryant and
Aron Marchler{-}Bauer},
title = {Annotation of functional sites with the Conserved Domain Database},
journal = {Database J. Biol. Databases Curation},
volume = {2012},
year = {2012},
url = {https://doi.org/10.1093/database/bar058},
doi = {10.1093/DATABASE/BAR058},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DerbyshireLBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NeuwaldLM12,
author = {Andrew F. Neuwald and
Christopher J. Lanczycki and
Aron Marchler{-}Bauer},
title = {Automated hierarchical classification of protein domain subfamilies
based on functionally-divergent residue signatures},
journal = {{BMC} Bioinform.},
volume = {13},
pages = {144},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-144},
doi = {10.1186/1471-2105-13-144},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NeuwaldLM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBBBCCCDFFFGHKKLLLMMMMMKOPPPSSSSSSSSTWWWYY12,
author = {Eric W. Sayers and
Tanya Barrett and
Dennis A. Benson and
Evan Bolton and
Stephen H. Bryant and
Kathi Canese and
Vyacheslav Chetvernin and
Deanna M. Church and
Michael DiCuccio and
Scott Federhen and
Michael Feolo and
Ian M. Fingerman and
Lewis Y. Geer and
Wolfgang Helmberg and
Yuri Kapustin and
Sergey Krasnov and
David Landsman and
David J. Lipman and
Zhiyong Lu and
Thomas L. Madden and
Tom Madej and
Donna R. Maglott and
Aron Marchler{-}Bauer and
Vadim Miller and
Ilene Karsch{-}Mizrachi and
James Ostell and
Anna R. Panchenko and
Lon Phan and
Kim D. Pruitt and
Gregory D. Schuler and
Edwin Sequeira and
Stephen T. Sherry and
Martin Shumway and
Karl Sirotkin and
Douglas J. Slotta and
Alexandre Souvorov and
Grigory Starchenko and
Tatiana A. Tatusova and
Lukas Wagner and
Yanli Wang and
W. John Wilbur and
Eugene Yaschenko and
Jian Ye},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {13--25},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1184},
doi = {10.1093/NAR/GKR1184},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBBBCCCDFFFGHKKLLLMMMMMKOPPPSSSSSSSSTWWWYY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadejAFGGLLLMPCTWZB12,
author = {Thomas Madej and
Kenneth J. Addess and
Jessica H. Fong and
Lewis Y. Geer and
Renata C. Geer and
Christopher J. Lanczycki and
Chunlei Liu and
Shennan Lu and
Aron Marchler{-}Bauer and
Anna R. Panchenko and
Jie Chen and
Paul A. Thiessen and
Yanli Wang and
Dachuan Zhang and
Stephen H. Bryant},
title = {{MMDB:} 3D structures and macromolecular interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {461--464},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1162},
doi = {10.1093/NAR/GKR1162},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MadejAFGGLLLMPCTWZB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShoemakerZTTFMBMP12,
author = {Benjamin A. Shoemaker and
Dachuan Zhang and
Manoj Tyagi and
Ratna R. Thangudu and
Jessica H. Fong and
Aron Marchler{-}Bauer and
Stephen H. Bryant and
Thomas Madej and
Anna R. Panchenko},
title = {{IBIS} (Inferred Biomolecular Interaction Server) reports, predicts
and integrates multiple types of conserved interactions for proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {834--840},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr997},
doi = {10.1093/NAR/GKR997},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ShoemakerZTTFMBMP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SridharaMBG11,
author = {Viswanadham Sridhara and
Aron Marchler{-}Bauer and
Stephen H. Bryant and
Lewis Y. Geer},
title = {Automatic annotation of experimentally derived, evolutionarily conserved
post-translational modifications onto multiple genomes},
journal = {Database J. Biol. Databases Curation},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1093/database/bar019},
doi = {10.1093/DATABASE/BAR019},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/SridharaMBG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBBBCCCDFFFGHKLLLMMMMMMOPPPSSSSSSSSTWWWYY11,
author = {Eric W. Sayers and
Tanya Barrett and
Dennis A. Benson and
Evan Bolton and
Stephen H. Bryant and
Kathi Canese and
Vyacheslav Chetvernin and
Deanna M. Church and
Michael DiCuccio and
Scott Federhen and
Michael Feolo and
Ian M. Fingerman and
Lewis Y. Geer and
Wolfgang Helmberg and
Yuri Kapustin and
David Landsman and
David J. Lipman and
Zhiyong Lu and
Thomas L. Madden and
Tom Madej and
Donna R. Maglott and
Aron Marchler{-}Bauer and
Vadim Miller and
Ilene Mizrachi and
James Ostell and
Anna R. Panchenko and
Lon Phan and
Kim D. Pruitt and
Gregory D. Schuler and
Edwin Sequeira and
Stephen T. Sherry and
Martin Shumway and
Karl Sirotkin and
Douglas J. Slotta and
Alexandre Souvorov and
Grigory Starchenko and
Tatiana A. Tatusova and
Lukas Wagner and
Yanli Wang and
W. John Wilbur and
Eugene Yaschenko and
Jian Ye},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {38--51},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq1172},
doi = {10.1093/NAR/GKQ1172},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBBBCCCDFFFGHKLLLMMMMMMOPPPSSSSSSSSTWWWYY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerLACDDFGGGGHJKLLMMORSTYZZZB11,
author = {Aron Marchler{-}Bauer and
Shennan Lu and
John B. Anderson and
Farideh Chitsaz and
Myra K. Derbyshire and
Carol DeWeese{-}Scott and
Jessica H. Fong and
Lewis Y. Geer and
Renata C. Geer and
Noreen R. Gonzales and
Marc Gwadz and
David I. Hurwitz and
John D. Jackson and
Zhaoxi Ke and
Christopher J. Lanczycki and
Fu Lu and
Gabriele H. Marchler and
Mikhail Mullokandov and
Marina V. Omelchenko and
Cynthia L. Robertson and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Dachuan Zhang and
Naigong Zhang and
Chanjuan Zheng and
Stephen H. Bryant},
title = {{CDD:} a Conserved Domain Database for the functional annotation of
proteins},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {225--229},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq1189},
doi = {10.1093/NAR/GKQ1189},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerLACDDFGGGGHJKLLMMORSTYZZZB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBBBCCCDFFGHKLLLMMMMMMOPPSSSSSSSSTWWWYY10,
author = {Eric W. Sayers and
Tanya Barrett and
Dennis A. Benson and
Evan Bolton and
Stephen H. Bryant and
Kathi Canese and
Vyacheslav Chetvernin and
Deanna M. Church and
Michael DiCuccio and
Scott Federhen and
Michael Feolo and
Lewis Y. Geer and
Wolfgang Helmberg and
Yuri Kapustin and
David Landsman and
David J. Lipman and
Zhiyong Lu and
Thomas L. Madden and
Tom Madej and
Donna R. Maglott and
Aron Marchler{-}Bauer and
Vadim Miller and
Ilene Mizrachi and
James Ostell and
Anna R. Panchenko and
Kim D. Pruitt and
Gregory D. Schuler and
Edwin Sequeira and
Stephen T. Sherry and
Martin Shumway and
Karl Sirotkin and
Douglas J. Slotta and
Alexandre Souvorov and
Grigory Starchenko and
Tatiana A. Tatusova and
Lukas Wagner and
Yanli Wang and
W. John Wilbur and
Eugene Yaschenko and
Jian Ye},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {5--16},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp967},
doi = {10.1093/NAR/GKP967},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBBBCCCDFFGHKLLLMMMMMMOPPSSSSSSSSTWWWYY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GeerMGHHHLSB10,
author = {Lewis Y. Geer and
Aron Marchler{-}Bauer and
Renata C. Geer and
Lianyi Han and
Jane He and
Siqian He and
Chunlei Liu and
Wenyao Shi and
Stephen H. Bryant},
title = {The {NCBI} BioSystems database},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {492--496},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp858},
doi = {10.1093/NAR/GKP858},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GeerMGHHHLSB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShoemakerZTTFMBMP10,
author = {Benjamin A. Shoemaker and
Dachuan Zhang and
Ratna R. Thangudu and
Manoj Tyagi and
Jessica H. Fong and
Aron Marchler{-}Bauer and
Stephen H. Bryant and
Tom Madej and
Anna R. Panchenko},
title = {Inferred Biomolecular Interaction Server - a web server to analyze
and predict protein interacting partners and binding sites},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {518--524},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp842},
doi = {10.1093/NAR/GKP842},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ShoemakerZTTFMBMP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/AnibaSFPPMT09,
author = {Mohamed Radhouene Aniba and
Sophie Siguenza and
Anne Friedrich and
Fr{\'{e}}d{\'{e}}ric Plewniak and
Olivier Poch and
Aron Marchler{-}Bauer and
Julie Dawn Thompson},
title = {Knowledge-based expert systems and a proof-of-concept case study for
multiple sequence alignment construction and analysis},
journal = {Briefings Bioinform.},
volume = {10},
number = {1},
pages = {11--23},
year = {2009},
url = {https://doi.org/10.1093/bib/bbn045},
doi = {10.1093/BIB/BBN045},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/AnibaSFPPMT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FongM09,
author = {Jessica H. Fong and
Aron Marchler{-}Bauer},
title = {{CORAL:} aligning conserved core regions across domain families},
journal = {Bioinform.},
volume = {25},
number = {15},
pages = {1862--1868},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp334},
doi = {10.1093/BIOINFORMATICS/BTP334},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FongM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09,
author = {Aron Marchler{-}Bauer and
John B. Anderson and
Farideh Chitsaz and
Myra K. Derbyshire and
Carol DeWeese{-}Scott and
Jessica H. Fong and
Lewis Y. Geer and
Renata C. Geer and
Noreen R. Gonzales and
Marc Gwadz and
Siqian He and
David I. Hurwitz and
John D. Jackson and
Zhaoxi Ke and
Christopher J. Lanczycki and
Cynthia A. Liebert and
Chunlei Liu and
Fu Lu and
Shennan Lu and
Gabriele H. Marchler and
Mikhail Mullokandov and
James S. Song and
Asba Tasneem and
Narmada Thanki and
Roxanne A. Yamashita and
Dachuan Zhang and
Naigong Zhang and
Stephen H. Bryant},
title = {{CDD:} specific functional annotation with the Conserved Domain Database},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Database-Issue},
pages = {205--210},
year = {2009},
url = {https://doi.org/10.1093/nar/gkn845},
doi = {10.1093/NAR/GKN845},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerADDGGHHHJKKLLLLLMMSTYYZB07,
author = {Aron Marchler{-}Bauer and
John B. Anderson and
Myra K. Derbyshire and
Carol DeWeese{-}Scott and
Noreen R. Gonzales and
Marc Gwadz and
Luning Hao and
Siqian He and
David I. Hurwitz and
John D. Jackson and
Zhaoxi Ke and
Dmitri M. Krylov and
Christopher J. Lanczycki and
Cynthia A. Liebert and
Chunlei Liu and
Fu Lu and
Shennan Lu and
Gabriele H. Marchler and
Mikhail Mullokandov and
James S. Song and
Narmada Thanki and
Roxanne A. Yamashita and
Jodie J. Yin and
Dachuan Zhang and
Stephen H. Bryant},
title = {{CDD:} a conserved domain database for interactive domain family analysis},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {237--240},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl951},
doi = {10.1093/NAR/GKL951},
timestamp = {Fri, 18 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerADDGGHHHJKKLLLLLMMSTYYZB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangACGHHLMMTZB07,
author = {Yanli Wang and
Kenneth J. Addess and
Jie Chen and
Lewis Y. Geer and
Jane He and
Siqian He and
Shennan Lu and
Thomas Madej and
Aron Marchler{-}Bauer and
Paul A. Thiessen and
Naigong Zhang and
Stephen H. Bryant},
title = {{MMDB:} annotating protein sequences with Entrez's 3D-structure database},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {298--300},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl952},
doi = {10.1093/NAR/GKL952},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/WangACGHHLMMTZB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05,
author = {Aron Marchler{-}Bauer and
John B. Anderson and
Praveen F. Cherukuri and
Carol DeWeese{-}Scott and
Lewis Y. Geer and
Marc Gwadz and
Siqian He and
David I. Hurwitz and
John D. Jackson and
Zhaoxi Ke and
Christopher J. Lanczycki and
Cynthia A. Liebert and
Chunlei Liu and
Fu Lu and
Gabriele H. Marchler and
Mikhail Mullokandov and
Benjamin A. Shoemaker and
Vahan Simonyan and
James S. Song and
Paul A. Thiessen and
Roxanne A. Yamashita and
Jodie J. Yin and
Dachuan Zhang and
Stephen H. Bryant},
title = {{CDD:} a Conserved Domain Database for protein classification},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {192--196},
year = {2005},
url = {https://doi.org/10.1093/nar/gki069},
doi = {10.1093/NAR/GKI069},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerACDGGHHJKLLLLMMSSSTYYZB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerB04,
author = {Aron Marchler{-}Bauer and
Stephen H. Bryant},
title = {CD-Search: protein domain annotations on the fly},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {327--331},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh454},
doi = {10.1093/NAR/GKH454},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03,
author = {Aron Marchler{-}Bauer and
John B. Anderson and
Carol DeWeese{-}Scott and
Natalie D. Fedorova and
Lewis Y. Geer and
Siqian He and
David I. Hurwitz and
John D. Jackson and
Aviva R. Jacobs and
Christopher J. Lanczycki and
Cynthia A. Liebert and
Chunlei Liu and
Thomas Madej and
Gabriele H. Marchler and
Raja Mazumder and
Anastasia N. Nikolskaya and
Anna R. Panchenko and
Bachoti S. Rao and
Benjamin A. Shoemaker and
Vahan Simonyan and
James S. Song and
Paul A. Thiessen and
Sona Vasudevan and
Yanli Wang and
Roxanne A. Yamashita and
Jodie J. Yin and
Stephen H. Bryant},
title = {{CDD:} a curated Entrez database of conserved domain alignments},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {383--387},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg087},
doi = {10.1093/NAR/GKG087},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerADFGHHJJLLLMMMNPRSSSTVWYYB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03,
author = {Jie Chen and
John B. Anderson and
Carol DeWeese{-}Scott and
Natalie D. Fedorova and
Lewis Y. Geer and
Siqian He and
David I. Hurwitz and
John D. Jackson and
Aviva R. Jacobs and
Christopher J. Lanczycki and
Cynthia A. Liebert and
Chunlei Liu and
Thomas Madej and
Aron Marchler{-}Bauer and
Gabriele H. Marchler and
Raja Mazumder and
Anastasia N. Nikolskaya and
Bachoti S. Rao and
Anna R. Panchenko and
Benjamin A. Shoemaker and
Vahan Simonyan and
James S. Song and
Paul A. Thiessen and
Sona Vasudevan and
Yanli Wang and
Roxanne A. Yamashita and
Jodie J. Yin and
Stephen H. Bryant},
title = {{MMDB:} Entrez's 3D-structure database},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {474--477},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg086},
doi = {10.1093/NAR/GKG086},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ChenADFGHHJJLLLMMMMNRPSSSTVWYYB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangACGHHLMMMPSSTYB03,
author = {Yanli Wang and
John B. Anderson and
Jie Chen and
Lewis Y. Geer and
Siqian He and
David I. Hurwitz and
Cynthia A. Liebert and
Thomas Madej and
Gabriele H. Marchler and
Aron Marchler{-}Bauer and
Anna R. Panchenko and
Benjamin A. Shoemaker and
James S. Song and
Paul A. Thiessen and
Roxanne A. Yamashita and
Stephen H. Bryant},
title = {{MMDB:} Entrez's 3D-structure database},
journal = {Nucleic Acids Res.},
volume = {30},
number = {1},
pages = {249--252},
year = {2002},
url = {https://doi.org/10.1093/nar/30.1.249},
doi = {10.1093/NAR/30.1.249},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangACGHHLMMMPSSTYB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerPSTGB03,
author = {Aron Marchler{-}Bauer and
Anna R. Panchenko and
Benjamin A. Shoemaker and
Paul A. Thiessen and
Lewis Y. Geer and
Stephen H. Bryant},
title = {{CDD:} a database of conserved domain alignments with links to domain
three-dimensional structure},
journal = {Nucleic Acids Res.},
volume = {30},
number = {1},
pages = {281--283},
year = {2002},
url = {https://doi.org/10.1093/nar/30.1.281},
doi = {10.1093/NAR/30.1.281},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerPSTGB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WheelanMB00,
author = {Sarah J. Wheelan and
Aron Marchler{-}Bauer and
Stephen H. Bryant},
title = {Domain size distributions can predict domain boundaries},
journal = {Bioinform.},
volume = {16},
number = {7},
pages = {613--618},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.7.613},
doi = {10.1093/BIOINFORMATICS/16.7.613},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WheelanMB00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangAGMMZB00,
author = {Yanli Wang and
Kenneth J. Addess and
Lewis Y. Geer and
Thomas Madej and
Aron Marchler{-}Bauer and
Diane Zimmerman and
Stephen H. Bryant},
title = {{MMDB:} 3D structure data in Entrez},
journal = {Nucleic Acids Res.},
volume = {28},
number = {1},
pages = {243--245},
year = {2000},
url = {https://doi.org/10.1093/nar/28.1.243},
doi = {10.1093/NAR/28.1.243},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangAGMMZB00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Marchler-BauerACGMMWB99,
author = {Aron Marchler{-}Bauer and
Kenneth J. Addess and
Colombe Chappey and
Lewis Y. Geer and
Thomas Madej and
Yo Matsuo and
Yanli Wang and
Stephen H. Bryant},
title = {{MMDB:} Entrez's 3D structure database},
journal = {Nucleic Acids Res.},
volume = {27},
number = {1},
pages = {240--243},
year = {1999},
url = {https://doi.org/10.1093/nar/27.1.240},
doi = {10.1093/NAR/27.1.240},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerACGMMWB99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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