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ORCIDBibTeX records: Thomas Lengauer
@article{DBLP:journals/corr/abs-2311-04846,
author = {Giulia Di Teodoro and
Martin Pirkl and
Francesca Incardona and
Ilaria Vicenti and
Anders S{\"{o}}nnerborg and
Rolf Kaiser and
Laura Palagi and
Maurizio Zazzi and
Thomas Lengauer},
title = {Incorporating temporal dynamics of mutations to enhance the prediction
capability of antiretroviral therapy's outcome for {HIV-1}},
journal = {CoRR},
volume = {abs/2311.04846},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2311.04846},
doi = {10.48550/ARXIV.2311.04846},
eprinttype = {arXiv},
eprint = {2311.04846},
timestamp = {Tue, 14 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2311-04846.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DoringBFPKKHODT18,
author = {Matthias D{\"{o}}ring and
Joachim B{\"{u}}ch and
Georg Friedrich and
Alejandro Pironti and
Prabhav Kalaghatgi and
Elena Knops and
Eva Heger and
Martin Obermeier and
Martin D{\"{a}}umer and
Alexander Thielen and
Rolf Kaiser and
Thomas Lengauer and
Nico Pfeifer},
title = {geno2pheno[ngs-freq]: a genotypic interpretation system for identifying
viral drug resistance using next-generation sequencing data},
journal = {Nucleic Acids Res.},
volume = {46},
number = {Webserver-Issue},
pages = {W271--W277},
year = {2018},
url = {https://doi.org/10.1093/nar/gky349},
doi = {10.1093/NAR/GKY349},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DoringBFPKKHODT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlbrechtLBL17,
author = {Felipe Albrecht and
Markus List and
Christoph Bock and
Thomas Lengauer},
title = {DeepBlueR: large-scale epigenomic analysis in {R}},
journal = {Bioinform.},
volume = {33},
number = {13},
pages = {2063--2064},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btx099},
doi = {10.1093/BIOINFORMATICS/BTX099},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlbrechtLBL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BergerGLOGMV17,
author = {Bonnie Berger and
Terry Gaasterland and
Thomas Lengauer and
Christine A. Orengo and
Bruno Ga{\"{e}}ta and
Scott Markel and
Alfonso Valencia},
title = {ISCB's initial reaction to New England Journal of Medicine editorial
on data sharing},
journal = {Bioinform.},
volume = {33},
number = {18},
pages = {2968},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btw090},
doi = {10.1093/BIOINFORMATICS/BTW090},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BergerGLOGMV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgaa/KalaghatgiL17,
author = {Prabhav Kalaghatgi and
Thomas Lengauer},
title = {Computing phylogenetic trees using topologically related minimum spanning
trees},
journal = {J. Graph Algorithms Appl.},
volume = {21},
number = {6},
pages = {1003--1025},
year = {2017},
url = {https://doi.org/10.7155/jgaa.00447},
doi = {10.7155/JGAA.00447},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgaa/KalaghatgiL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/KalaghatgiL17,
author = {Prabhav Kalaghatgi and
Thomas Lengauer},
title = {Selecting optimal minimum spanning trees that share a topological
correspondence with phylogenetic trees},
journal = {CoRR},
volume = {abs/1701.02844},
year = {2017},
url = {http://arxiv.org/abs/1701.02844},
eprinttype = {arXiv},
eprint = {1701.02844},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/KalaghatgiL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlbrechtLBL16,
author = {Felipe Albrecht and
Markus List and
Christoph Bock and
Thomas Lengauer},
title = {DeepBlue epigenomic data server: programmatic data retrieval and analysis
of epigenome region sets},
journal = {Nucleic Acids Res.},
volume = {44},
number = {Webserver-Issue},
pages = {W581--W586},
year = {2016},
url = {https://doi.org/10.1093/nar/gkw211},
doi = {10.1093/NAR/GKW211},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AlbrechtLBL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BergerGLOGMV16,
author = {Bonnie Berger and
Terry Gaasterland and
Thomas Lengauer and
Christine A. Orengo and
Bruno Ga{\"{e}}ta and
Scott Markel and
Alfonso Valencia},
title = {ISCB's Initial Reaction to \emph{The New England Journal of Medicine}
Editorial on Data Sharing},
journal = {PLoS Comput. Biol.},
volume = {12},
number = {3},
year = {2016},
url = {https://doi.org/10.1371/journal.pcbi.1004816},
doi = {10.1371/JOURNAL.PCBI.1004816},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BergerGLOGMV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EbertMNLS15,
author = {Peter Ebert and
Fabian M{\"{u}}ller and
Karl Nordstr{\"{o}}m and
Thomas Lengauer and
Marcel H. Schulz},
title = {A general concept for consistent documentation of computational analyses},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav050},
doi = {10.1093/DATABASE/BAV050},
timestamp = {Fri, 29 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/EbertMNLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KarpBKLLSHR15,
author = {Peter D. Karp and
Bonnie Berger and
Diane E. Kovats and
Thomas Lengauer and
Michal Linial and
Pardis Sabeti and
Winston Hide and
Burkhard Rost},
title = {Message from the {ISCB:} {ISCB} Ebola award for important future research
on the computational biology of Ebola virus},
journal = {Bioinform.},
volume = {31},
number = {4},
pages = {616--617},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv019},
doi = {10.1093/BIOINFORMATICS/BTV019},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KarpBKLLSHR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KarpBKLLSHR15,
author = {Peter D. Karp and
Bonnie Berger and
Diane E. Kovats and
Thomas Lengauer and
Michal Linial and
Pardis Sabeti and
Winston Hide and
Burkhard Rost},
title = {{ISCB} Ebola Award for Important Future Research on the Computational
Biology of Ebola Virus},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {1},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004087},
doi = {10.1371/JOURNAL.PCBI.1004087},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/KarpBKLLSHR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LengauerN15,
author = {Thomas Lengauer and
Ruth Nussinov},
title = {How to Write a Presubmission Inquiry},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {2},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004098},
doi = {10.1371/JOURNAL.PCBI.1004098},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/LengauerN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/HildebrandtDLLAH14,
author = {Anna Katharina Hildebrandt and
Matthias Dietzen and
Thomas Lengauer and
Hans{-}Peter Lenhof and
Ernst Althaus and
Andreas Hildebrandt},
title = {Efficient computation of root mean square deviations under rigid transformations},
journal = {J. Comput. Chem.},
volume = {35},
number = {10},
pages = {765--771},
year = {2014},
url = {https://doi.org/10.1002/jcc.23513},
doi = {10.1002/JCC.23513},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/HildebrandtDLLAH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/AhmadKL14,
author = {Mazen Ahmad and
Olga V. Kalinina and
Thomas Lengauer},
title = {Entropy gain due to water release upon ligand binding},
journal = {J. Cheminformatics},
volume = {6},
number = {{S-1}},
pages = {35},
year = {2014},
url = {https://doi.org/10.1186/1758-2946-6-S1-P35},
doi = {10.1186/1758-2946-6-S1-P35},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcheminf/AhmadKL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DietzenZHL14,
author = {Matthias Dietzen and
Elena Zotenko and
Andreas Hildebrandt and
Thomas Lengauer},
title = {Correction to On the Applicability of Elastic Network Normal Modes
in Small-Molecule Docking},
journal = {J. Chem. Inf. Model.},
volume = {54},
number = {12},
pages = {3453},
year = {2014},
url = {https://doi.org/10.1021/ci5006788},
doi = {10.1021/CI5006788},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/DietzenZHL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BeckerLEBLW14,
author = {Daniel Becker and
Pavlo Lutsik and
Peter Ebert and
Christoph Bock and
Thomas Lengauer and
J{\"{o}}rn Walter},
title = {BiQ Analyzer HiMod: an interactive software tool for high-throughput
locus-specific analysis of 5-methylcytosine and its oxidized derivatives},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Webserver-Issue},
pages = {501--507},
year = {2014},
url = {https://doi.org/10.1093/nar/gku457},
doi = {10.1093/NAR/GKU457},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BeckerLEBLW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TolosiTHHBL13,
author = {Laura Tolosi and
Jessica Thei{\ss}en and
Konstantin Halachev and
Barbara Hero and
Frank Berthold and
Thomas Lengauer},
title = {A method for finding consensus breakpoints in the cancer genome from
copy number data},
journal = {Bioinform.},
volume = {29},
number = {14},
pages = {1793--1800},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt300},
doi = {10.1093/BIOINFORMATICS/BTT300},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TolosiTHHBL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BozekLSKD13,
author = {Katarzyna Bozek and
Thomas Lengauer and
Saleta Sierra and
Rolf Kaiser and
Francisco S. Domingues},
title = {Analysis of Physicochemical and Structural Properties Determining
{HIV-1} Coreceptor Usage},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {3},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1002977},
doi = {10.1371/JOURNAL.PCBI.1002977},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BozekLSKD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LengauerN13,
author = {Thomas Lengauer and
Ruth Nussinov},
title = {New Methods Section in \emph{PLOS Computational Biology}},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {3},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1002972},
doi = {10.1371/JOURNAL.PCBI.1002972},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/LengauerN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SchelhornFTANPLB13,
author = {Sven{-}Eric Schelhorn and
Matthias Fischer and
Laura Tolosi and
Janine Altm{\"{u}}ller and
Peter N{\"{u}}rnberg and
Herbert Pfister and
Thomas Lengauer and
Frank Berthold},
title = {Sensitive Detection of Viral Transcripts in Human Tumor Transcriptomes},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {10},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1003228},
doi = {10.1371/JOURNAL.PCBI.1003228},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/SchelhornFTANPLB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PfeiferL12,
author = {Nico Pfeifer and
Thomas Lengauer},
title = {Improving {HIV} coreceptor usage prediction in the clinic using hints
from next-generation sequencing data},
journal = {Bioinform.},
volume = {28},
number = {18},
pages = {589--595},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts373},
doi = {10.1093/BIOINFORMATICS/BTS373},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PfeiferL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RostGLLMMSHK12,
author = {Burkhard Rost and
Terry Gaasterland and
Thomas Lengauer and
Michal Linial and
Scott Markel and
B. J. Morrison McKay and
Reinhard Schneider and
Paul Horton and
Janet Kelso},
title = {Paving the future: finding suitable {ISMB} venues},
journal = {Bioinform.},
volume = {28},
number = {19},
pages = {2556--2559},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts420},
doi = {10.1093/BIOINFORMATICS/BTS420},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RostGLLMMSHK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DietzenZHL12,
author = {Matthias Dietzen and
Elena Zotenko and
Andreas Hildebrandt and
Thomas Lengauer},
title = {On the Applicability of Elastic Network Normal Modes in Small-Molecule
Docking},
journal = {J. Chem. Inf. Model.},
volume = {52},
number = {3},
pages = {844--856},
year = {2012},
url = {https://doi.org/10.1021/ci2004847},
doi = {10.1021/CI2004847},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/DietzenZHL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/jmlr/BogojeskaSZKIRL12,
author = {Jasmina Bogojeska and
Daniel St{\"{o}}ckel and
Maurizio Zazzi and
Rolf Kaiser and
Francesca Incardona and
Michal Rosen{-}Zvi and
Thomas Lengauer},
editor = {Neil D. Lawrence and
Mark A. Girolami},
title = {History-alignment models for bias-aware prediction of virological
response to {HIV} combination therapy},
booktitle = {Proceedings of the Fifteenth International Conference on Artificial
Intelligence and Statistics, {AISTATS} 2012, La Palma, Canary Islands,
Spain, April 21-23, 2012},
series = {{JMLR} Proceedings},
volume = {22},
pages = {118--126},
publisher = {JMLR.org},
year = {2012},
url = {http://proceedings.mlr.press/v22/bogojeska12.html},
timestamp = {Wed, 29 May 2019 08:41:44 +0200},
biburl = {https://dblp.org/rec/journals/jmlr/BogojeskaSZKIRL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TolosiL11,
author = {Laura Tolosi and
Thomas Lengauer},
title = {Classification with correlated features: unreliability of feature
ranking and solutions},
journal = {Bioinform.},
volume = {27},
number = {14},
pages = {1986--1994},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr300},
doi = {10.1093/BIOINFORMATICS/BTR300},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TolosiL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/DaumerKKLTT11,
author = {Martin D{\"{a}}umer and
Rolf Kaiser and
Rolf Klein and
Thomas Lengauer and
Bernhard Thiele and
Alexander Thielen},
title = {Genotypic tropism testing by massively parallel sequencing: qualitative
and quantitative analysis},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {11},
pages = {30},
year = {2011},
url = {https://doi.org/10.1186/1472-6947-11-30},
doi = {10.1186/1472-6947-11-30},
timestamp = {Sun, 06 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/DaumerKKLTT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LutsikFALWB11,
author = {Pavlo Lutsik and
Lars Feuerbach and
Julia Arand and
Thomas Lengauer and
J{\"{o}}rn Walter and
Christoph Bock},
title = {BiQ Analyzer {HT:} locus-specific analysis of {DNA} methylation by
high-throughput bisulfite sequencing},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Web-Server-Issue},
pages = {551--556},
year = {2011},
url = {https://doi.org/10.1093/nar/gkr312},
doi = {10.1093/NAR/GKR312},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LutsikFALWB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AltmannTSL10,
author = {Andr{\'{e}} Altmann and
Laura Tolosi and
Oliver Sander and
Thomas Lengauer},
title = {Permutation importance: a corrected feature importance measure},
journal = {Bioinform.},
volume = {26},
number = {10},
pages = {1340--1347},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq134},
doi = {10.1093/BIOINFORMATICS/BTQ134},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AltmannTSL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BogojeskaBAL10,
author = {Jasmina Bogojeska and
Steffen Bickel and
Andr{\'{e}} Altmann and
Thomas Lengauer},
title = {Dealing with sparse data in predicting outcomes of {HIV} combination
therapies},
journal = {Bioinform.},
volume = {26},
number = {17},
pages = {2085--2092},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq361},
doi = {10.1093/BIOINFORMATICS/BTQ361},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BogojeskaBAL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchlickerLA10,
author = {Andreas Schlicker and
Thomas Lengauer and
Mario Albrecht},
title = {Improving disease gene prioritization using the semantic similarity
of Gene Ontology terms},
journal = {Bioinform.},
volume = {26},
number = {18},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq384},
doi = {10.1093/BIOINFORMATICS/BTQ384},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchlickerLA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RoompAL10,
author = {Kirsten Roomp and
Iris Antes and
Thomas Lengauer},
title = {Predicting {MHC} class {I} epitopes in large datasets},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {90},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-90},
doi = {10.1186/1471-2105-11-90},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RoompAL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cacm/LengauerATK10,
author = {Thomas Lengauer and
Andr{\'{e}} Altmann and
Alexander Thielen and
Rolf Kaiser},
title = {Chasing the {AIDS} virus},
journal = {Commun. {ACM}},
volume = {53},
number = {3},
pages = {66--74},
year = {2010},
url = {https://doi.org/10.1145/1666420.1666440},
doi = {10.1145/1666420.1666440},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cacm/LengauerATK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EmigSBLCA10,
author = {Dorothea Emig and
Nathan Salomonis and
Jan Baumbach and
Thomas Lengauer and
Bruce R. Conklin and
Mario Albrecht},
title = {AltAnalyze and DomainGraph: analyzing and visualizing exon expression
data},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Web-Server-Issue},
pages = {755--762},
year = {2010},
url = {https://doi.org/10.1093/nar/gkq405},
doi = {10.1093/NAR/GKQ405},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EmigSBLCA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BlankenburgFPJRESBLA09,
author = {Hagen Blankenburg and
Robert D. Finn and
Andreas Prlic and
Andrew M. Jenkinson and
Fidel Ram{\'{\i}}rez and
Dorothea Emig and
Sven{-}Eric Schelhorn and
Joachim B{\"{u}}ch and
Thomas Lengauer and
Mario Albrecht},
title = {{DASMI:} exchanging, annotating and assessing molecular interaction
data},
journal = {Bioinform.},
volume = {25},
number = {10},
pages = {1321--1328},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp142},
doi = {10.1093/BIOINFORMATICS/BTP142},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BlankenburgFPJRESBLA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/insk/LengauerAT09,
author = {Thomas Lengauer and
Andr{\'{e}} Altmann and
Alexander Thielen},
title = {Bioinformatische Unterst{\"{u}}tzung der Auswahl von HIV-Therapien},
journal = {Inform. Spektrum},
volume = {32},
number = {4},
pages = {320--331},
year = {2009},
url = {https://doi.org/10.1007/s00287-009-0352-7},
doi = {10.1007/S00287-009-0352-7},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/insk/LengauerAT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/PernerAL09,
author = {Juliane Perner and
Andr{\'{e}} Altmann and
Thomas Lengauer},
editor = {Ivo Grosse and
Steffen Neumann and
Stefan Posch and
Falk Schreiber and
Peter F. Stadler},
title = {Semi-Supervised Learning for Improving Prediction of {HIV} Drug Resistance},
booktitle = {German Conference on Bioinformatics 2009, 28th to 30th September 2009,
Martin Luther University Halle-Wittenberg, Germany},
series = {{LNI}},
volume = {{P-157}},
pages = {55--65},
publisher = {{GI}},
year = {2009},
url = {https://dl.gi.de/handle/20.500.12116/20310},
timestamp = {Tue, 04 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gcb/PernerAL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BockL08,
author = {Christoph Bock and
Thomas Lengauer},
title = {Computational epigenetics},
journal = {Bioinform.},
volume = {24},
number = {1},
pages = {1--10},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btm546},
doi = {10.1093/BIOINFORMATICS/BTM546},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BockL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AssenovRSLA08,
author = {Yassen Assenov and
Fidel Ram{\'{\i}}rez and
Sven{-}Eric Schelhorn and
Thomas Lengauer and
Mario Albrecht},
title = {Computing topological parameters of biological networks},
journal = {Bioinform.},
volume = {24},
number = {2},
pages = {282--284},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btm554},
doi = {10.1093/BIOINFORMATICS/BTM554},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AssenovRSLA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BogojeskaAALR08,
author = {Jasmina Bogojeska and
Adrian Alexa and
Andr{\'{e}} Altmann and
Thomas Lengauer and
J{\"{o}}rg Rahnenf{\"{u}}hrer},
title = {Rtreemix: an {R} package for estimating evolutionary pathways and
genetic progression scores},
journal = {Bioinform.},
volume = {24},
number = {20},
pages = {2391--2392},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn410},
doi = {10.1093/BIOINFORMATICS/BTN410},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BogojeskaAALR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EmigCLA08,
author = {Dorothea Emig and
Melissa S. Cline and
Thomas Lengauer and
Mario Albrecht},
title = {Integrating expression data with domain interaction networks},
journal = {Bioinform.},
volume = {24},
number = {21},
pages = {2546--2548},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn437},
doi = {10.1093/BIOINFORMATICS/BTN437},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EmigCLA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BogojeskaLR08,
author = {Jasmina Bogojeska and
Thomas Lengauer and
J{\"{o}}rg Rahnenf{\"{u}}hrer},
title = {Stability analysis of mixtures of mutagenetic trees},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-165},
doi = {10.1186/1471-2105-9-165},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BogojeskaLR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/EmigCKKMLA08,
author = {Dorothea Emig and
Melissa S. Cline and
Karsten Klein and
Anne Kunert and
Petra Mutzel and
Thomas Lengauer and
Mario Albrecht},
title = {Integrative Visual Analysis of the Effects of Alternative Splicing
on Protein Domain Interaction Networks},
journal = {J. Integr. Bioinform.},
volume = {5},
number = {2},
year = {2008},
url = {https://doi.org/10.2390/biecoll-jib-2008-101},
doi = {10.2390/BIECOLL-JIB-2008-101},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/EmigCKKMLA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/WeinholdSDLS08,
author = {Nils Weinhold and
Oliver Sander and
Francisco S. Domingues and
Thomas Lengauer and
Ingolf Sommer},
title = {Local Function Conservation in Sequence and Structure Space},
journal = {PLoS Comput. Biol.},
volume = {4},
number = {7},
year = {2008},
url = {https://doi.org/10.1371/journal.pcbi.1000105},
doi = {10.1371/JOURNAL.PCBI.1000105},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/WeinholdSDLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SanderDZLS08,
author = {Oliver Sander and
Francisco S. Domingues and
Hongbo Zhu and
Thomas Lengauer and
Ingolf Sommer},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Structural Descriptors of Protein-Protein Binding Sites},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {79--88},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2008/apbc012a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SanderDZLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/SchelhornLA08,
author = {Sven{-}Eric Schelhorn and
Thomas Lengauer and
Mario Albrecht},
title = {An integrative approach for predicting interactions of protein regions},
booktitle = {ECCB'08 Proceedings, Seventh European Conference on Computational
Biology, 22-26 September 2008, Cagliari, Italy},
pages = {35--41},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn290},
doi = {10.1093/BIOINFORMATICS/BTN290},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eccb/SchelhornLA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/BickelBLS08,
author = {Steffen Bickel and
Jasmina Bogojeska and
Thomas Lengauer and
Tobias Scheffer},
editor = {William W. Cohen and
Andrew McCallum and
Sam T. Roweis},
title = {Multi-task learning for {HIV} therapy screening},
booktitle = {Machine Learning, Proceedings of the Twenty-Fifth International Conference
{(ICML} 2008), Helsinki, Finland, June 5-9, 2008},
series = {{ACM} International Conference Proceeding Series},
volume = {307},
pages = {56--63},
publisher = {{ACM}},
year = {2008},
url = {https://doi.org/10.1145/1390156.1390164},
doi = {10.1145/1390156.1390164},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icml/BickelBLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Rosen-ZviAPANSSSPIKZL08,
author = {Michal Rosen{-}Zvi and
Andr{\'{e}} Altmann and
Mattia Prosperi and
Ehud Aharoni and
Hani Neuvirth and
Anders S{\"{o}}nnerborg and
Eugen Sch{\"{u}}lter and
Daniel Struck and
Yardena Peres and
Francesca Incardona and
Rolf Kaiser and
Maurizio Zazzi and
Thomas Lengauer},
title = {Selecting anti-HIV therapies based on a variety of genomic and clinical
factors},
booktitle = {Proceedings 16th International Conference on Intelligent Systems for
Molecular Biology (ISMB), Toronto, Canada, July 19-23, 2008},
pages = {399--406},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn141},
doi = {10.1093/BIOINFORMATICS/BTN141},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/Rosen-ZviAPANSSSPIKZL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/SchlickerRRHPDLA08,
author = {Andreas Schlicker and
Fidel Ram{\'{\i}}rez and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Carola Huthmacher and
Alejandro Pironti and
Francisco S. Domingues and
Thomas Lengauer and
Mario Albrecht},
editor = {Michael Ashburner and
Ulf Leser and
Dietrich Rebholz{-}Schuhmann},
title = {Applications of semantic similarity measures},
booktitle = {Ontologies and Text Mining for Life Sciences: Current Status and Future
Perspectives, 24.03. - 28.03.2008},
series = {Dagstuhl Seminar Proceedings},
volume = {08131},
publisher = {Internationales Begegnungs- und Forschungszentrum f{\"{u}}r Informatik
(IBFI), Schloss Dagstuhl, Germany},
year = {2008},
url = {http://drops.dagstuhl.de/opus/volltexte/2008/1519},
timestamp = {Thu, 10 Jun 2021 13:02:07 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/SchlickerRRHPDLA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchlickerHRLA07,
author = {Andreas Schlicker and
Carola Huthmacher and
Fidel Ram{\'{\i}}rez and
Thomas Lengauer and
Mario Albrecht},
title = {Functional evaluation of domain-domain interactions and human protein
interaction networks},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {859--865},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm012},
doi = {10.1093/BIOINFORMATICS/BTM012},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchlickerHRLA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DominguesRL07,
author = {Francisco S. Domingues and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Thomas Lengauer},
title = {Conformational analysis of alternative protein structures},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3131--3138},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm499},
doi = {10.1093/BIOINFORMATICS/BTM499},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DominguesRL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SommerMDSWL07,
author = {Ingolf Sommer and
Oliver M{\"{u}}ller and
Francisco S. Domingues and
Oliver Sander and
Joachim Weickert and
Thomas Lengauer},
title = {Moment invariants as shape recognition technique for comparing protein
binding sites},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3139--3146},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm503},
doi = {10.1093/BIOINFORMATICS/BTM503},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SommerMDSWL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SanderSSLCHLD07,
author = {Oliver Sander and
Tobias Sing and
Ingolf Sommer and
Andrew J. Low and
Peter K. Cheung and
P. Richard Harrigan and
Thomas Lengauer and
Francisco S. Domingues},
title = {Structural Descriptors of gp120 {V3} Loop for the Prediction of {HIV-1}
Coreceptor Usage},
journal = {PLoS Comput. Biol.},
volume = {3},
number = {3},
year = {2007},
url = {https://doi.org/10.1371/journal.pcbi.0030058},
doi = {10.1371/JOURNAL.PCBI.0030058},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/SanderSSLCHLD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LengauerMR07,
author = {Thomas Lengauer and
B. J. Morrison McKay and
Burkhard Rost},
title = {{ISMB/ECCB} 2007: The Premier Conference on Computational Biology},
journal = {PLoS Comput. Biol.},
volume = {3},
number = {5},
year = {2007},
url = {https://doi.org/10.1371/journal.pcbi.0030096},
doi = {10.1371/JOURNAL.PCBI.0030096},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/LengauerMR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BockWPL07,
author = {Christoph Bock and
J{\"{o}}rn Walter and
Martina Paulsen and
Thomas Lengauer},
title = {CpG Island Mapping by Epigenome Prediction},
journal = {PLoS Comput. Biol.},
volume = {3},
number = {6},
year = {2007},
url = {https://doi.org/10.1371/journal.pcbi.0030110},
doi = {10.1371/JOURNAL.PCBI.0030110},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BockWPL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaydtL06,
author = {Jochen Maydt and
Thomas Lengauer},
title = {Recco: recombination analysis using cost optimization},
journal = {Bioinform.},
volume = {22},
number = {9},
pages = {1064--1071},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl057},
doi = {10.1093/BIOINFORMATICS/BTL057},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaydtL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TordaL06,
author = {Andrew E. Torda and
Thomas Lengauer},
title = {Editorial},
journal = {Bioinform.},
volume = {22},
number = {10},
pages = {1157},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl078},
doi = {10.1093/BIOINFORMATICS/BTL078},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TordaL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HeilLLL06,
author = {Burkhard Heil and
Jost Ludwig and
Hella Lichtenberg{-}Frat{\'{e}} and
Thomas Lengauer},
title = {Computational recognition of potassium channel sequences},
journal = {Bioinform.},
volume = {22},
number = {13},
pages = {1562--1568},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl132},
doi = {10.1093/BIOINFORMATICS/BTL132},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HeilLLL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlexaRL06,
author = {Adrian Alexa and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Thomas Lengauer},
title = {Improved scoring of functional groups from gene expression data by
decorrelating {GO} graph structure},
journal = {Bioinform.},
volume = {22},
number = {13},
pages = {1600--1607},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl140},
doi = {10.1093/BIOINFORMATICS/BTL140},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlexaRL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SanderSL06,
author = {Oliver Sander and
Ingolf Sommer and
Thomas Lengauer},
title = {Local protein structure prediction using discriminative models},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {14},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-14},
doi = {10.1186/1471-2105-7-14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SanderSL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhuDSL06,
author = {Hongbo Zhu and
Francisco S. Domingues and
Ingolf Sommer and
Thomas Lengauer},
title = {NOXclass: prediction of protein-protein interaction types},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {27},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-27},
doi = {10.1186/1471-2105-7-27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhuDSL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchlickerDRL06,
author = {Andreas Schlicker and
Francisco S. Domingues and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Thomas Lengauer},
title = {A new measure for functional similarity of gene products based on
Gene Ontology},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {302},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-302},
doi = {10.1186/1471-2105-7-302},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchlickerDRL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SommerTSLT06,
author = {Ingolf Sommer and
Stefano Toppo and
Oliver Sander and
Thomas Lengauer and
Silvio C. E. Tosatto},
title = {Improving the quality of protein structure models by selecting from
alignment alternatives},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {364},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-364},
doi = {10.1186/1471-2105-7-364},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SommerTSLT06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NeumannKML06,
author = {Dirk Neumann and
Oliver Kohlbacher and
Christian Merkwirth and
Thomas Lengauer},
title = {A Fully Computational Model for Predicting Percutaneous Drug Absorption},
journal = {J. Chem. Inf. Model.},
volume = {46},
number = {1},
pages = {424--429},
year = {2006},
url = {https://doi.org/10.1021/ci050332t},
doi = {10.1021/CI050332T},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/NeumannKML06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/KamperARML06,
author = {Andreas K{\"{a}}mper and
Joannis Apostolakis and
Matthias Rarey and
Christel M. Marian and
Thomas Lengauer},
title = {Fully Automated Flexible Docking of Ligands into Flexible Synthetic
Receptors Using Forward and Inverse Docking Strategies},
journal = {J. Chem. Inf. Model.},
volume = {46},
number = {2},
pages = {903--911},
year = {2006},
url = {https://doi.org/10.1021/ci050467z},
doi = {10.1021/CI050467Z},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/KamperARML06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/SteffenKL06,
author = {Andreas Steffen and
Andreas K{\"{a}}mper and
Thomas Lengauer},
title = {Flexible Docking of Ligands into Synthetic Receptors Using a Two-Sided
Incremental Construction Algorithm},
journal = {J. Chem. Inf. Model.},
volume = {46},
number = {4},
pages = {1695--1703},
year = {2006},
url = {https://doi.org/10.1021/ci060072v},
doi = {10.1021/CI060072V},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/SteffenKL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/RoompBSSBSDHKLS06,
author = {Kirsten Roomp and
Niko Beerenwinkel and
Tobias Sing and
Eugen Sch{\"{u}}lter and
Joachim B{\"{u}}ch and
Saleta Sierra{-}Aragon and
Martin D{\"{a}}umer and
Daniel Hoffmann and
Rolf Kaiser and
Thomas Lengauer and
Joachim Selbig},
editor = {Ulf Leser and
Felix Naumann and
Barbara A. Eckman},
title = {Arevir: {A} Secure Platform for Designing Personalized Antiretroviral
Therapies Against {HIV}},
booktitle = {Data Integration in the Life Sciences, Third International Workshop,
{DILS} 2006, Hinxton, UK, July 20-22, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4075},
pages = {185--194},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11799511\_16},
doi = {10.1007/11799511\_16},
timestamp = {Tue, 14 May 2019 10:00:43 +0200},
biburl = {https://dblp.org/rec/conf/dils/RoompBSSBSDHKLS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/SchlickerHRLA06,
author = {Andreas Schlicker and
Carola Huthmacher and
Fidel Ram{\'{\i}}rez and
Thomas Lengauer and
Mario Albrecht},
editor = {Daniel H. Huson and
Oliver Kohlbacher and
Andrei N. Lupas and
Kay Nieselt and
Andreas Zell},
title = {Functional Evaluation of Domain-Domain Interactions and Human Protein
Interaction Networks},
booktitle = {German Conference on Bioinformatics {GCB} 2006, 19.09. 2006 - 22.09.
2006 in T{\"{u}}bingen, Germany},
series = {{LNI}},
volume = {{P-83}},
pages = {115--126},
publisher = {{GI}},
year = {2006},
url = {https://dl.gi.de/handle/20.500.12116/24206},
timestamp = {Tue, 04 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gcb/SchlickerHRLA06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/AntesSL06,
author = {Iris Antes and
Shirley W. I. Siu and
Thomas Lengauer},
title = {DynaPred: {A} structure and sequence based method for the prediction
of {MHC} class {I} binding peptide sequences and conformations},
booktitle = {Proceedings 14th International Conference on Intelligent Systems for
Molecular Biology 2006, Fortaleza, Brazil, August 6-10, 2006},
pages = {16--24},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl216},
doi = {10.1093/BIOINFORMATICS/BTL216},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/AntesSL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeerenwinkelRKHSL05,
author = {Niko Beerenwinkel and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Rolf Kaiser and
Daniel Hoffmann and
Joachim Selbig and
Thomas Lengauer},
title = {Mtreemix: a software package for learning and using mixture models
of mutagenetic trees},
journal = {Bioinform.},
volume = {21},
number = {9},
pages = {2106--2107},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti274},
doi = {10.1093/BIOINFORMATICS/BTI274},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeerenwinkelRKHSL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RahnenfuhrerBSHDWL05,
author = {J{\"{o}}rg Rahnenf{\"{u}}hrer and
Niko Beerenwinkel and
Wolfgang A. Schulz and
Christian Hartmann and
Andreas von Deimling and
Bernd Wullich and
Thomas Lengauer},
title = {Estimating cancer survival and clinical outcome based on genetic tumor
progression scores},
journal = {Bioinform.},
volume = {21},
number = {10},
pages = {2438--2446},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti312},
doi = {10.1093/BIOINFORMATICS/BTI312},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RahnenfuhrerBSHDWL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SingSBL05,
author = {Tobias Sing and
Oliver Sander and
Niko Beerenwinkel and
Thomas Lengauer},
title = {{ROCR:} visualizing classifier performance in {R}},
journal = {Bioinform.},
volume = {21},
number = {20},
pages = {3940--3941},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti623},
doi = {10.1093/BIOINFORMATICS/BTI623},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SingSBL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeerenwinkelSLRRSFHSKWBBFORKKD05,
author = {Niko Beerenwinkel and
Tobias Sing and
Thomas Lengauer and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Kirsten Roomp and
Igor Savenkov and
Roman Fischer and
Daniel Hoffmann and
Joachim Selbig and
Klaus Korn and
Hauke Walter and
Thomas Berg and
Patrick Braun and
Gerd F{\"{a}}tkenheuer and
Mark Oette and
J{\"{u}}rgen K. Rockstroh and
Bernd Kupfer and
Rolf Kaiser and
Martin D{\"{a}}umer},
title = {Computational methods for the design of effective therapies against
drug resistant {HIV} strains},
journal = {Bioinform.},
volume = {21},
number = {21},
pages = {3943--3950},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti654},
doi = {10.1093/BIOINFORMATICS/BTI654},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeerenwinkelSLRRSFHSKWBBFORKKD05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BockRMPWL05,
author = {Christoph Bock and
Sabine Reither and
Thomas Mikeska and
Martina Paulsen and
J{\"{o}}rn Walter and
Thomas Lengauer},
title = {BiQ Analyzer: visualization and quality control for {DNA} methylation
data from bisulfite sequencing},
journal = {Bioinform.},
volume = {21},
number = {21},
pages = {4067--4068},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti652},
doi = {10.1093/BIOINFORMATICS/BTI652},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BockRMPWL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HahnRTL05,
author = {Andreas Hahn and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Priti Talwar and
Thomas Lengauer},
title = {Confirmation of human protein interaction data by human expression
data},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {112},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-112},
doi = {10.1186/1471-2105-6-112},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HahnRTL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/it/Lengauer05,
author = {Thomas Lengauer},
title = {The {DFG} Priority Program "Informatics Methods for the Analysis
and Interpretation of Large Genomic Datasets"},
journal = {it Inf. Technol.},
volume = {47},
number = {4},
pages = {226--231},
year = {2005},
url = {https://doi.org/10.1524/itit.2005.47.4.226},
doi = {10.1524/ITIT.2005.47.4.226},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/it/Lengauer05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BeerenwinkelRDHKSL05,
author = {Niko Beerenwinkel and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Martin D{\"{a}}umer and
Daniel Hoffmann and
Rolf Kaiser and
Joachim Selbig and
Thomas Lengauer},
title = {Learning Multiple Evolutionary Pathways from Cross-Sectional Data},
journal = {J. Comput. Biol.},
volume = {12},
number = {6},
pages = {584--598},
year = {2005},
url = {https://doi.org/10.1089/cmb.2005.12.584},
doi = {10.1089/CMB.2005.12.584},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/BeerenwinkelRDHKSL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerkwirthL05,
author = {Christian Merkwirth and
Thomas Lengauer},
title = {Automatic Generation of Complementary Descriptors with Molecular Graph
Networks},
journal = {J. Chem. Inf. Model.},
volume = {45},
number = {5},
pages = {1159--1168},
year = {2005},
url = {https://doi.org/10.1021/ci049613b},
doi = {10.1021/CI049613B},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/MerkwirthL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/AntesML05,
author = {Iris Antes and
Christian Merkwirth and
Thomas Lengauer},
title = {{POEM:} Parameter Optimization Using Ensemble Methods: Application
to Target Specific Scoring Functions},
journal = {J. Chem. Inf. Model.},
volume = {45},
number = {5},
pages = {1291--1302},
year = {2005},
url = {https://doi.org/10.1021/ci050036g},
doi = {10.1021/CI050036G},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/AntesML05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/AlbrechtHTL05,
author = {Mario Albrecht and
Carola Huthmacher and
Silvio C. E. Tosatto and
Thomas Lengauer},
title = {Decomposing protein networks into domain-domain interactions},
booktitle = {ECCB/JBI'05 Proceedings, Fourth European Conference on Computational
Biology/Sixth Meeting of the Spanish Bioinformatics Network (Jornadas
de BioInform{\'{a}}tica), Palacio de Congresos, Madrid, Spain,
September 28 - October 1, 2005},
pages = {221},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti1135},
doi = {10.1093/BIOINFORMATICS/BTI1135},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eccb/AlbrechtHTL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lwa/SingBLSCP05,
author = {Tobias Sing and
Niko Beerenwinkel and
Thomas Lengauer and
Valentina Svicher and
Francesca Ceccherini{-}Silberstein and
Carlo{-}Federico Perno},
editor = {Mathias Bauer and
Boris Brandherm and
Johannes F{\"{u}}rnkranz and
Gunter Grieser and
Andreas Hotho and
Andreas Jedlitschka and
Alexander Kr{\"{o}}ner},
title = {Supervised and Unsupervised Approaches for Analyzing Covariation and
Phenotypic Impact of {HIV} Drug Resistance Mutations},
booktitle = {Lernen, Wissensentdeckung und Adaptivit{\"{a}}t {(LWA)} 2005,
{GI} Workshops, Saarbr{\"{u}}cken, October 10th-12th, 2005},
pages = {234--239},
publisher = {{DFKI}},
year = {2005},
timestamp = {Mon, 14 Nov 2005 13:40:03 +0100},
biburl = {https://dblp.org/rec/conf/lwa/SingBLSCP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/SingSBCDKWKHORFPL05,
author = {Tobias Sing and
Valentina Svicher and
Niko Beerenwinkel and
Francesca Ceccherini{-}Silberstein and
Martin D{\"{a}}umer and
Rolf Kaiser and
Hauke Walter and
Klaus Korn and
Daniel Hoffmann and
Mark Oette and
J{\"{u}}rgen K. Rockstroh and
Gerd F{\"{a}}tkenheuer and
Carlo{-}Federico Perno and
Thomas Lengauer},
editor = {Al{\'{\i}}pio Jorge and
Lu{\'{\i}}s Torgo and
Pavel Brazdil and
Rui Camacho and
Jo{\~{a}}o Gama},
title = {Characterization of Novel {HIV} Drug Resistance Mutations Using Clustering,
Multidimensional Scaling and SVM-Based Feature Ranking},
booktitle = {Knowledge Discovery in Databases: {PKDD} 2005, 9th European Conference
on Principles and Practice of Knowledge Discovery in Databases, Porto,
Portugal, October 3-7, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3721},
pages = {285--296},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11564126\_30},
doi = {10.1007/11564126\_30},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pkdd/SingSBCDKWKHORFPL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CrassAB04,
author = {Torsten Crass and
Iris Antes and
Rico Basekow and
Peer Bork and
Christian Buning and
Maik Christensen and
Holger Claussen and
Christian Ebeling and
Peter Ernst and
Val{\'{e}}rie Gailus{-}Durner and
Karl{-}Heinz Glatting and
Rolf Gohla and
Frank G{\"{o}}{\ss}ling and
Korbinian Grote and
Karsten R. Heidtke and
Alexander Herrmann and
Sean O'Keeffe and
O. Kie{\ss}lich and
Sven Kolibal and
Jan O. Korbel and
Thomas Lengauer and
Ines Liebich and
Mark van der Linden and
Hannes Luz and
Kathrin Meissner and
Christian von Mering and
Heinz{-}Theodor Mevissen and
Hans{-}Werner Mewes and
Holger Michael and
Martin Mokrejs and
Tobias M{\"{u}}ller and
Heike Pospisil and
Matthias Rarey and
Jens G. Reich and
Ralf Schneider and
Dietmar Schomburg and
Steffen Schulze{-}Kremer and
Knut Schwarzer and
Ingolf Sommer and
Stephan Springstubbe and
S{\'{a}}ndor Suhai and
Gnanasekaran Thoppae and
Martin Vingron and
Jens Warfsmann and
Thomas Werner and
Daniel Wetzler and
Edgar Wingender and
Ralf Zimmer},
title = {The Helmholtz Network for Bioinformatics: an integrative web portal
for bioinformatics resources},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {268--270},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg398},
doi = {10.1093/BIOINFORMATICS/BTG398},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CrassAB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SommerRDLL04,
author = {Ingolf Sommer and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Francisco S. Domingues and
Ulrik de Lichtenberg and
Thomas Lengauer},
title = {Predicting protein structure classes from function predictions},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {770--776},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg483},
doi = {10.1093/BIOINFORMATICS/BTG483},
timestamp = {Mon, 25 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SommerRDLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OhsenSZL04,
author = {Niklas von {\"{O}}hsen and
Ingolf Sommer and
Ralf Zimmer and
Thomas Lengauer},
title = {Arby: automatic protein structure prediction using profile-profile
alignment and confidence measures},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2228--2235},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth232},
doi = {10.1093/BIOINFORMATICS/BTH232},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OhsenSZL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/MerkwirthMSRSL04,
author = {Christian Merkwirth and
Harald Mauser and
Tanja Schulz{-}Gasch and
Olivier Roche and
Martin Stahl and
Thomas Lengauer},
title = {Ensemble Methods for Classification in Cheminformatics},
journal = {J. Chem. Inf. Model.},
volume = {44},
number = {6},
pages = {1971--1978},
year = {2004},
url = {https://doi.org/10.1021/ci049850e},
doi = {10.1021/CI049850E},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/MerkwirthMSRSL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BeerenwinkelRDHKSL04,
author = {Niko Beerenwinkel and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Martin D{\"{a}}umer and
Daniel Hoffmann and
Rolf Kaiser and
Joachim Selbig and
Thomas Lengauer},
editor = {Philip E. Bourne and
Dan Gusfield},
title = {Learning multiple evolutionary pathways from cross-sectional data},
booktitle = {Proceedings of the Eighth Annual International Conference on Computational
Molecular Biology, 2004, San Diego, California, USA, March 27-31,
2004},
pages = {36--44},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/974614.974620},
doi = {10.1145/974614.974620},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BeerenwinkelRDHKSL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rocai/SingBL04,
author = {Tobias Sing and
Niko Beerenwinkel and
Thomas Lengauer},
editor = {Jos{\'{e}} Hern{\'{a}}ndez{-}Orallo and
C{\'{e}}sar Ferri and
Nicolas Lachiche and
Peter A. Flach},
title = {Learning Mixtures of Localized Rules by Maximizing the Area Under
the {ROC} Curve},
booktitle = {{ROC} Analysis in Artificial Intelligence, 1st International Workshop,
ROCAI-2004, Valencia, Spain, August 22, 2004},
pages = {89--96},
year = {2004},
timestamp = {Wed, 18 Aug 2004 14:18:46 +0200},
biburl = {https://dblp.org/rec/conf/rocai/SingBL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlbrechtL03,
author = {Mario Albrecht and
Thomas Lengauer},
title = {Pyranose Oxidase Identified as {A} Member of the {GMC} Oxidoreductase
Family},
journal = {Bioinform.},
volume = {19},
number = {10},
pages = {1216--1220},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg140},
doi = {10.1093/BIOINFORMATICS/BTG140},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlbrechtL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlbrechtLS03,
author = {Mario Albrecht and
Thomas Lengauer and
Stefan Schreiber},
title = {Disease-associated variants in {PYPAF1} and {NOD2} result in similar
alterations of conserved sequence},
journal = {Bioinform.},
volume = {19},
number = {17},
pages = {2171--2175},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg370},
doi = {10.1093/BIOINFORMATICS/BTG370},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlbrechtLS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZienFZL03,
author = {Alexander Zien and
Juliane Fluck and
Ralf Zimmer and
Thomas Lengauer},
title = {Microarrays: How Many Do You Need?},
journal = {J. Comput. Biol.},
volume = {10},
number = {3/4},
pages = {653--667},
year = {2003},
url = {https://doi.org/10.1089/10665270360688246},
doi = {10.1089/10665270360688246},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/ZienFZL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jpdc/PeinadoL03,
author = {Marcus Peinado and
Thomas Lengauer},
title = {Parallel 'go with the winners' algorithms in distributed memory models},
journal = {J. Parallel Distributed Comput.},
volume = {63},
number = {9},
pages = {801--814},
year = {2003},
url = {https://doi.org/10.1016/S0743-7315(03)00109-6},
doi = {10.1016/S0743-7315(03)00109-6},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jpdc/PeinadoL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BeerenwinkelDOKHKLSW03,
author = {Niko Beerenwinkel and
Martin D{\"{a}}umer and
Mark Oette and
Klaus Korn and
Daniel Hoffmann and
Rolf Kaiser and
Thomas Lengauer and
Joachim Selbig and
Hauke Walter},
title = {Geno2pheno: estimating phenotypic drug resistance from {HIV-1} genotypes},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3850--3855},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg575},
doi = {10.1093/NAR/GKG575},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BeerenwinkelDOKHKLSW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/Lengauer03,
author = {Thomas Lengauer},
title = {Analyzing resistance phenomena in {HIV} with bioinformatics methods},
booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB}
2003), September 27-30, 2003, Paris, France},
pages = {92},
year = {2003},
timestamp = {Mon, 27 Oct 2003 15:56:17 +0100},
biburl = {https://dblp.org/rec/conf/eccb/Lengauer03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BeerenwinkelLDKWKHS03,
author = {Niko Beerenwinkel and
Thomas Lengauer and
Martin D{\"{a}}umer and
Rolf Kaiser and
Hauke Walter and
Klaus Korn and
Daniel Hoffmann and
Joachim Selbig},
title = {Methods for optimizing antiviral combination therapies},
booktitle = {Proceedings of the Eleventh International Conference on Intelligent
Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane, Australia},
pages = {16--25},
year = {2003},
url = {http://bioinformatics.oupjournals.org/cgi/content/abstract/19/suppl\_1/i16?etoc},
timestamp = {Mon, 03 Nov 2003 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/BeerenwinkelLDKWKHS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SommerZOZL02,
author = {Ingolf Sommer and
Alexander Zien and
Niklas von {\"{O}}hsen and
Ralf Zimmer and
Thomas Lengauer},
title = {Confidence measures for protein fold recognition},
journal = {Bioinform.},
volume = {18},
number = {6},
pages = {802--812},
year = {2002},
url = {https://doi.org/10.1093/bioinformatics/18.6.802},
doi = {10.1093/BIOINFORMATICS/18.6.802},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SommerZOZL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/HanischZL02,
author = {Daniel Hanisch and
Ralf Zimmer and
Thomas Lengauer},
title = {ProML - the Protein Markup Language for specification of protein sequences,
structures and families},
journal = {Silico Biol.},
volume = {2},
number = {3},
pages = {313--324},
year = {2002},
url = {http://content.iospress.com/articles/in-silico-biology/isb00052},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/HanischZL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/AlbrechtHZL02,
author = {Mario Albrecht and
Daniel Hanisch and
Ralf Zimmer and
Thomas Lengauer},
title = {Improving fold recognition of protein threading by experimental distance
constraints},
journal = {Silico Biol.},
volume = {2},
number = {3},
pages = {325--337},
year = {2002},
url = {http://content.iospress.com/articles/in-silico-biology/isb00053},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/AlbrechtHZL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/FreudenbergZHL02,
author = {Jan Freudenberg and
Ralf Zimmer and
Daniel Hanisch and
Thomas Lengauer},
title = {A hypergraph-based method for unification of existing protein structure-
and sequence-families},
journal = {Silico Biol.},
volume = {2},
number = {3},
pages = {339--349},
year = {2002},
url = {http://content.iospress.com/articles/in-silico-biology/isb00054},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/FreudenbergZHL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/HindleRBL02,
author = {Sally A. Hindle and
Matthias Rarey and
Christian Buning and
Thomas Lengauer},
title = {Flexible docking under pharmacophore type constraints},
journal = {J. Comput. Aided Mol. Des.},
volume = {16},
number = {2},
pages = {129--149},
year = {2002},
url = {https://doi.org/10.1023/A:1016399411208},
doi = {10.1023/A:1016399411208},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/HindleRBL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Lengauer02,
author = {Thomas Lengauer},
title = {Preface: Special {RECOMB} 2001 Issue},
journal = {J. Comput. Biol.},
volume = {9},
number = {2},
pages = {147--148},
year = {2002},
url = {https://doi.org/10.1089/10665270252935386},
doi = {10.1089/10665270252935386},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/Lengauer02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pnas/BeerenwinkelSWK02,
author = {Niko Beerenwinkel and
Barbara Schmidt and
Hauke Walter and
Rolf Kaiser and
Thomas Lengauer and
Daniel Hoffmann and
Klaus Korn and
Joachim Selbig},
title = {Diversity and complexity of {HIV-1} drug resistance: {A} bioinformatics
approach to predicting phenotype from genotype},
journal = {Proc. Natl. Acad. Sci. {USA}},
volume = {99},
number = {12},
pages = {8271--8276},
year = {2002},
url = {https://doi.org/10.1073/pnas.112177799},
doi = {10.1073/PNAS.112177799},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pnas/BeerenwinkelSWK02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/Lengauer02,
author = {Thomas Lengauer},
title = {Editorial},
booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB}
2002), October 6-9, 2002, Saarbr{\"{u}}cken, Germany},
pages = {1},
year = {2002},
timestamp = {Thu, 23 Jun 2016 15:53:27 +0200},
biburl = {https://dblp.org/rec/conf/eccb/Lengauer02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/Lengauer02a,
author = {Thomas Lengauer},
title = {{ECCB} 2002 Organization},
booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB}
2002), October 6-9, 2002, Saarbr{\"{u}}cken, Germany},
pages = {2--3},
year = {2002},
timestamp = {Thu, 14 Nov 2002 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eccb/Lengauer02a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/HanischZZL02,
author = {Daniel Hanisch and
Alexander Zien and
Ralf Zimmer and
Thomas Lengauer},
title = {Co-clustering of biological networks and gene expression data},
booktitle = {Proceedings of the Tenth International Conference on Intelligent Systems
for Molecular Biology, August 3-7, 2002, Edmonton, Alberta, Canada},
pages = {145--154},
year = {2002},
timestamp = {Wed, 29 Jun 2011 14:55:41 +0200},
biburl = {https://dblp.org/rec/conf/ismb/HanischZZL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZienFZL02,
author = {Alexander Zien and
Juliane Fluck and
Ralf Zimmer and
Thomas Lengauer},
editor = {Gene Myers and
Sridhar Hannenhalli and
David Sankoff and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Microarrays: how many do you need?},
booktitle = {Proceedings of the Sixth Annual International Conference on Computational
Biology, {RECOMB} 2002, Washington, DC, USA, April 18-21, 2002},
pages = {321--330},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/565196.565239},
doi = {10.1145/565196.565239},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZienFZL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/expert/BeerenwinkelSWKLHKS01,
author = {Niko Beerenwinkel and
Barbara Schmidt and
Hauke Walter and
Rolf Kaiser and
Thomas Lengauer and
Daniel Hoffmann and
Klaus Korn and
Joachim Selbig},
title = {Geno2pheno: Interpreting Genotypic {HIV} Drug Resistance Tests},
journal = {{IEEE} Intell. Syst.},
volume = {16},
number = {6},
pages = {35--41},
year = {2001},
url = {https://doi.org/10.1109/5254.972080},
doi = {10.1109/5254.972080},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/expert/BeerenwinkelSWKLHKS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/Lengauer01,
author = {Thomas Lengauer},
editor = {Reinhard Wilhelm},
title = {Computational Biology at the Beginning of the Post-genomic Era},
booktitle = {Informatics - 10 Years Back. 10 Years Ahead},
series = {Lecture Notes in Computer Science},
volume = {2000},
pages = {341--355},
publisher = {Springer},
year = {2001},
url = {https://doi.org/10.1007/3-540-44577-3\_24},
doi = {10.1007/3-540-44577-3\_24},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/Lengauer01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/SommerOZZL01,
author = {Ingolf Sommer and
Niklas von {\"{O}}hsen and
Alexander Zien and
Ralf Zimmer and
Thomas Lengauer},
editor = {Edgar Wingender},
title = {Confidence Measures for Fold Recognition},
booktitle = {Computer science and biology: Proceedings of the German Conference
on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany},
pages = {26--33},
publisher = {German Research Center for Biotechnology},
year = {2001},
timestamp = {Tue, 15 Mar 2005 13:06:29 +0100},
biburl = {https://dblp.org/rec/conf/gcb/SommerOZZL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/HanischZL01,
author = {Daniel Hanisch and
Ralf Zimmer and
Thomas Lengauer},
editor = {Edgar Wingender},
title = {ProML - the Protein Markup Language for specification of protein sequences,
structures and families},
booktitle = {Computer science and biology: Proceedings of the German Conference
on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany},
pages = {58--67},
publisher = {German Research Center for Biotechnology},
year = {2001},
timestamp = {Tue, 15 Mar 2005 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/HanischZL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/AlbrechtHZL01,
author = {Mario Albrecht and
Daniel Hanisch and
Ralf Zimmer and
Thomas Lengauer},
editor = {Edgar Wingender},
title = {Improving Fold Recognition of Protein Threading by Experimental Distance
Constraints},
booktitle = {Computer science and biology: Proceedings of the German Conference
on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany},
pages = {68--77},
publisher = {German Research Center for Biotechnology},
year = {2001},
timestamp = {Tue, 15 Mar 2005 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/AlbrechtHZL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/FreudenbergZHL01,
author = {Jan Freudenberg and
Ralf Zimmer and
Daniel Hanisch and
Thomas Lengauer},
editor = {Edgar Wingender},
title = {A new Method for Unification of Existing Protein Structure- and Sequence-Families},
booktitle = {Computer science and biology: Proceedings of the German Conference
on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany},
pages = {78--84},
publisher = {German Research Center for Biotechnology},
year = {2001},
timestamp = {Tue, 15 Mar 2005 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/FreudenbergZHL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/BeerenwinkelSWKLHKS01,
author = {Niko Beerenwinkel and
Barbara Schmidt and
Hauke Walter and
Rolf Kaiser and
Thomas Lengauer and
Daniel Hoffmann and
Klaus Korn and
Joachim Selbig},
editor = {Edgar Wingender},
title = {Identifying drug resistance-associated patterns in {HIV} genotypes},
booktitle = {Computer science and biology: Proceedings of the German Conference
on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany},
pages = {126--130},
publisher = {German Research Center for Biotechnology},
year = {2001},
timestamp = {Tue, 15 Mar 2005 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/BeerenwinkelSWKLHKS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ZienAZL01,
author = {Alexander Zien and
Thomas Aigner and
Ralf Zimmer and
Thomas Lengauer},
title = {Centralization: a new method for the normalization of gene expression
data},
booktitle = {Proceedings of the Ninth International Conference on Intelligent Systems
for Molecular Biology, July 21-25, 2001, Copenhagen, Denmark},
pages = {323--331},
year = {2001},
timestamp = {Thu, 20 Jun 2002 11:09:36 +0200},
biburl = {https://dblp.org/rec/conf/ismb/ZienAZL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2001,
editor = {Thomas Lengauer},
title = {Proceedings of the Fifth Annual International Conference on Computational
Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
April 22-25, 2001},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/369133},
doi = {10.1145/369133},
isbn = {1-58113-353-7},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/2001.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LengauerZ00,
author = {Thomas Lengauer and
Ralf Zimmer},
title = {Protein Structure Prediction Methods for Drug Design},
journal = {Briefings Bioinform.},
volume = {1},
number = {3},
pages = {275--288},
year = {2000},
url = {https://doi.org/10.1093/bib/1.3.275},
doi = {10.1093/BIB/1.3.275},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LengauerZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZienRMSLM00,
author = {Alexander Zien and
Gunnar R{\"{a}}tsch and
Sebastian Mika and
Bernhard Sch{\"{o}}lkopf and
Thomas Lengauer and
Klaus{-}Robert M{\"{u}}ller},
title = {Engineering support vector machine kernels that recognize translation
initiation sites},
journal = {Bioinform.},
volume = {16},
number = {9},
pages = {799--807},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.9.799},
doi = {10.1093/BIOINFORMATICS/16.9.799},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZienRMSLM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KuffnerZL00,
author = {Robert K{\"{u}}ffner and
Ralf Zimmer and
Thomas Lengauer},
title = {Pathway analysis in metabolic databases via differential metabolic
display {(DMD)}},
journal = {Bioinform.},
volume = {16},
number = {9},
pages = {825--836},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.9.825},
doi = {10.1093/BIOINFORMATICS/16.9.825},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KuffnerZL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/LemmenL00,
author = {Christian Lemmen and
Thomas Lengauer},
title = {Computational methods for the structural alignment of molecules},
journal = {J. Comput. Aided Mol. Des.},
volume = {14},
number = {3},
pages = {215--232},
year = {2000},
url = {https://doi.org/10.1023/A:1008194019144},
doi = {10.1023/A:1008194019144},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/LemmenL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZienZL00,
author = {Alexander Zien and
Ralf Zimmer and
Thomas Lengauer},
title = {A Simple Iterative Approach to Parameter Optimization},
journal = {J. Comput. Biol.},
volume = {7},
number = {3-4},
pages = {483--501},
year = {2000},
url = {https://doi.org/10.1089/106652700750050907},
doi = {10.1089/106652700750050907},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/ZienZL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamjo/LengauerL00,
author = {Thomas Lengauer and
Martin L{\"{u}}gering},
title = {Provably Good Global Routing of Integrated Circuits},
journal = {{SIAM} J. Optim.},
volume = {11},
number = {1},
pages = {1--30},
year = {2000},
url = {https://doi.org/10.1137/S1052623497331786},
doi = {10.1137/S1052623497331786},
timestamp = {Mon, 08 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamjo/LengauerL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/Lengauer00,
author = {Thomas Lengauer},
editor = {Mike Paterson},
title = {Computational Biology - Algorithms and More},
booktitle = {Algorithms - {ESA} 2000, 8th Annual European Symposium, Saarbr{\"{u}}cken,
Germany, September 5-8, 2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1879},
pages = {9--19},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-45253-2\_2},
doi = {10.1007/3-540-45253-2\_2},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/esa/Lengauer00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/Lengauer00,
author = {Thomas Lengauer},
editor = {Erich Bornberg{-}Bauer and
Ursula Rost and
Jens Stoye},
title = {Bioinformatics Problems Along the Process Line from Genomic Data to
New Drugs},
booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2000),
Heidelberg, October 5-7, 2000},
pages = {189},
publisher = {Logos Verlag},
year = {2000},
timestamp = {Fri, 22 Aug 2003 07:29:51 +0200},
biburl = {https://dblp.org/rec/conf/gcb/Lengauer00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ZienKZL00,
author = {Alexander Zien and
Robert K{\"{u}}ffner and
Ralf Zimmer and
Thomas Lengauer},
editor = {Philip E. Bourne and
Michael Gribskov and
Russ B. Altman and
Nancy Jensen and
Debra A. Hope and
Thomas Lengauer and
Julie C. Mitchell and
Eric D. Scheeff and
Chris Smith and
Shawn Strande and
Helge Weissig},
title = {Analysis of Gene Expression Data with Pathway Scores},
booktitle = {Proceedings of the Eighth International Conference on Intelligent
Systems for Molecular Biology, August 19-23, 2000, La Jolla / San
Diego, CA, {USA}},
pages = {407--417},
publisher = {{AAAI}},
year = {2000},
url = {http://www.aaai.org/Library/ISMB/2000/ismb00-041.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/ZienKZL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZeinZL00,
author = {Alexander Zien and
Ralf Zimmer and
Thomas Lengauer},
editor = {Ron Shamir and
Satoru Miyano and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A simple iterative approach to parameter optimization},
booktitle = {Proceedings of the Fourth Annual International Conference on Computational
Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
pages = {318--327},
publisher = {{ACM}},
year = {2000},
url = {https://doi.org/10.1145/332306.332570},
doi = {10.1145/332306.332570},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZeinZL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/2000,
editor = {Philip E. Bourne and
Michael Gribskov and
Russ B. Altman and
Nancy Jensen and
Debra A. Hope and
Thomas Lengauer and
Julie C. Mitchell and
Eric D. Scheeff and
Chris Smith and
Shawn Strande and
Helge Weissig},
title = {Proceedings of the Eighth International Conference on Intelligent
Systems for Molecular Biology, August 19-23, 2000, La Jolla / San
Diego, CA, {USA}},
publisher = {{AAAI}},
year = {2000},
isbn = {1-57735-115-0},
timestamp = {Fri, 04 May 2007 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/2000.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RareyKL99,
author = {Matthias Rarey and
Bernd Kramer and
Thomas Lengauer},
title = {Docking of hydrophobic ligands with interaction-based matching algorithms},
journal = {Bioinform.},
volume = {15},
number = {3},
pages = {243--250},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.3.243},
doi = {10.1093/BIOINFORMATICS/15.3.243},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RareyKL99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Lengauer99,
author = {Thomas Lengauer},
title = {Editorial. The Seventh International Conference on Intelligent Systems
for Molecular Biology (ISMB'99)},
journal = {Bioinform.},
volume = {15},
number = {10},
pages = {775},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.10.775},
doi = {10.1093/BIOINFORMATICS/15.10.775},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Lengauer99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SelbigML99,
author = {Joachim Selbig and
Heinz{-}Theodor Mevissen and
Thomas Lengauer},
title = {Decision tree-based formation of consensus protein secondary structure
prediction},
journal = {Bioinform.},
volume = {15},
number = {12},
pages = {1039--1046},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.12.1039},
doi = {10.1093/BIOINFORMATICS/15.12.1039},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SelbigML99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/ZienRMSLSLM99,
author = {Alexander Zien and
Gunnar R{\"{a}}tsch and
Sebastian Mika and
Bernhard Sch{\"{o}}lkopf and
Christian Lemmen and
Alexander J. Smola and
Thomas Lengauer and
Klaus{-}Robert M{\"{u}}ller},
title = {Engineering Support Vector Machine Kerneis That Recognize Translation
Initialion Sites},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1999,
October 4-6, 1999, Hannover, Germany},
pages = {37--43},
year = {1999},
timestamp = {Fri, 02 Aug 2019 15:48:16 +0200},
biburl = {https://dblp.org/rec/conf/gcb/ZienRMSLSLM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/KuffnerZL99,
author = {Robert K{\"{u}}ffner and
Ralf Zimmer and
Thomas Lengauer},
title = {Pathway analysis in metabolic databases via differetial metabolic
display {(DMD)}},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1999,
October 4-6, 1999, Hannover, Germany},
pages = {141--147},
year = {1999},
timestamp = {Fri, 02 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gcb/KuffnerZL99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/LemmenZZL99,
author = {Christian Lemmen and
Alexander Zien and
Ralf Zimmer and
Thomas Lengauer},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein},
title = {Application of Parameter Optimization to Molecular Comparison Problems},
booktitle = {Proceedings of the 4th Pacific Symposium on Biocomputing, {PSB} 1999,
The Orchid at Mauna Lani, Big Island of Hawaii, USA, January 4-9,
1999},
pages = {482--493},
year = {1999},
url = {http://psb.stanford.edu/psb-online/proceedings/psb99/Lemmen.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/LemmenZZL99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wg/Lengauer99,
author = {Thomas Lengauer},
editor = {Peter Widmayer and
Gabriele Neyer and
Stephan J. Eidenbenz},
title = {Invited Lecture: Discrete Optimization Methods for Packing Problems
in Two and Three Dimensions - With Applications in the Textile and
Car Manufacturing Industries},
booktitle = {Graph-Theoretic Concepts in Computer Science, 25th International Workshop,
{WG} '99, Ascona, Switzerland, June 17-19, 1999, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1665},
pages = {27--28},
publisher = {Springer},
year = {1999},
url = {https://doi.org/10.1007/3-540-46784-X\_3},
doi = {10.1007/3-540-46784-X\_3},
timestamp = {Wed, 11 Sep 2019 13:15:53 +0200},
biburl = {https://dblp.org/rec/conf/wg/Lengauer99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/1999,
editor = {Thomas Lengauer and
Reinhard Schneider and
Peer Bork and
Douglas L. Brutlag and
Janice I. Glasgow and
Hans{-}Werner Mewes and
Ralf Zimmer},
title = {Proceedings of the Seventh International Conference on Intelligent
Systems for Molecular Biology, August 6-10, 1999, Heidelberg, Germany},
publisher = {{AAAI}},
year = {1999},
isbn = {1-57735-083-9},
timestamp = {Mon, 24 Jun 2013 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/1999.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eor/HeckmannL98,
author = {Ralf Heckmann and
Thomas Lengauer},
title = {Computing closely matching upper and lower bounds on textile nesting
problems},
journal = {Eur. J. Oper. Res.},
volume = {108},
number = {3},
pages = {473--489},
year = {1998},
url = {https://doi.org/10.1016/S0377-2217(97)00049-0},
doi = {10.1016/S0377-2217(97)00049-0},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eor/HeckmannL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/LemmenHL98,
author = {Christian Lemmen and
Claus Hiller and
Thomas Lengauer},
title = {RigFit: {A} new approach to superimposing ligand molecules},
journal = {J. Comput. Aided Mol. Des.},
volume = {12},
number = {5},
pages = {491--502},
year = {1998},
url = {https://doi.org/10.1023/A:1008027706830},
doi = {10.1023/A:1008027706830},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/LemmenHL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/RareyKL98,
author = {Matthias Rarey and
Bernd Kramer and
Thomas Lengauer},
title = {Docking of hydrophobic ligands with interaction-based matching algorithms},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998,
University of Cologne, Germany, October 1998},
publisher = {Oxford University Press},
year = {1998},
timestamp = {Fri, 02 Aug 2019 15:48:14 +0200},
biburl = {https://dblp.org/rec/conf/gcb/RareyKL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/PeinadoL98,
author = {Marcus Peinado and
Thomas Lengauer},
editor = {Jeffrey Scott Vitter},
title = {Random Generation of Embedded Graphs and an Extension to Dobrushin
Uniqueness (Extended Abstract)},
booktitle = {Proceedings of the Thirtieth Annual {ACM} Symposium on the Theory
of Computing, Dallas, Texas, USA, May 23-26, 1998},
pages = {176--185},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/276698.276729},
doi = {10.1145/276698.276729},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/PeinadoL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/LemmenL97,
author = {Christian Lemmen and
Thomas Lengauer},
title = {Time-efficient flexible superposition of medium-sized molecules},
journal = {J. Comput. Aided Mol. Des.},
volume = {11},
number = {4},
pages = {357--368},
year = {1997},
url = {https://doi.org/10.1023/A:1007959729800},
doi = {10.1023/A:1007959729800},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/LemmenL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/RareyKL97,
author = {Matthias Rarey and
Bernd Kramer and
Thomas Lengauer},
title = {Multiple automatic base selection: Protein-ligand docking based on
incremental construction without manual intervention},
journal = {J. Comput. Aided Mol. Des.},
volume = {11},
number = {4},
pages = {369--384},
year = {1997},
url = {https://doi.org/10.1023/A:1007913026166},
doi = {10.1023/A:1007913026166},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/RareyKL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/LemmenHL97,
author = {Christian Lemmen and
Claus Hiller and
Thomas Lengauer},
title = {RigFit: a new approach to superimposing ligand molecules},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1997,
Kloster Irsee, Bavaria, Germany, September 1997},
pages = {103--105},
publisher = {Oxford University Press},
year = {1997},
timestamp = {Fri, 02 Aug 2019 15:48:15 +0200},
biburl = {https://dblp.org/rec/conf/gcb/LemmenHL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gi/BrandenburgJML97,
author = {Franz{-}Josef Brandenburg and
Michael J{\"{u}}nger and
Petra Mutzel and
Thomas Lengauer},
editor = {Matthias Jarke and
Klaus Pasedach and
Klaus Pohl},
title = {Algorithmen zum automatischen Zeichnen von Graphen im Rahmen des DFG-Schwerpunkts
Effiziente Algorithmen f{\"{u}}r diskrete Probleme und ihre Anwendungen},
booktitle = {Informatik '97, Informatik als Innovationsmotor, 27. Jahrestagung
der Gesellschaft f{\"{u}}r Informatik, Aachen, 24.-26. September
1997},
series = {Informatik Aktuell},
pages = {58--67},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/978-3-642-60831-5\_10},
doi = {10.1007/978-3-642-60831-5\_10},
timestamp = {Tue, 23 May 2017 01:10:32 +0200},
biburl = {https://dblp.org/rec/conf/gi/BrandenburgJML97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gi/Lengauer97,
author = {Thomas Lengauer},
editor = {Matthias Jarke and
Klaus Pasedach and
Klaus Pohl},
title = {DFG-Schwerpunkt: Informatikmethoden zur Analyse und Interpretation
gro{\ss}er genomischer Datenmengen},
booktitle = {Informatik '97, Informatik als Innovationsmotor, 27. Jahrestagung
der Gesellschaft f{\"{u}}r Informatik, Aachen, 24.-26. September
1997},
series = {Informatik Aktuell},
pages = {76--84},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/978-3-642-60831-5\_12},
doi = {10.1007/978-3-642-60831-5\_12},
timestamp = {Wed, 07 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gi/Lengauer97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/PeinadoL97,
author = {Marcus Peinado and
Thomas Lengauer},
title = {Parallel 'Go with the Winners' Algorithms in the LogP Model},
booktitle = {11th International Parallel Processing Symposium {(IPPS} '97), 1-5
April 1997, Geneva, Switzerland, Proceedings},
pages = {656--664},
publisher = {{IEEE} Computer Society},
year = {1997},
url = {https://doi.org/10.1109/IPPS.1997.580972},
doi = {10.1109/IPPS.1997.580972},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/PeinadoL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KochL97,
author = {Ina Koch and
Thomas Lengauer},
editor = {Terry Gaasterland and
Peter D. Karp and
Kevin Karplus and
Christos A. Ouzounis and
Chris Sander and
Alfonso Valencia},
title = {Detection of Distant Structural Similarities in a Set of Proteins
Using a Fast Graph-Based Method},
booktitle = {Proceedings of the 5th International Conference on Intelligent Systems
for Molecular Biology, Halkidiki, Greece, June 21-26, 1997},
pages = {167--178},
publisher = {{AAAI}},
year = {1997},
url = {http://www.aaai.org/Library/ISMB/1997/ismb97-025.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/KochL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/random/PeinadoL97,
author = {Marcus Peinado and
Thomas Lengauer},
editor = {Jos{\'{e}} D. P. Rolim},
title = {'Go with the winners' Generators with Applications to Molecular Modeling},
booktitle = {Randomization and Approximation Techniques in Computer Science, International
Workshop, RANDOM'97, Bolognna, Italy, July 11-12. 1997, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1269},
pages = {135--149},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/3-540-63248-4\_12},
doi = {10.1007/3-540-63248-4\_12},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/random/PeinadoL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZimmerL97,
author = {Ralf Zimmer and
Thomas Lengauer},
editor = {Michael S. Waterman},
title = {Fast and numerically stable parametric alignment of biosequences},
booktitle = {Proceedings of the First Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1997, Santa Fe, NM, USA,
January 20-23, 1997},
pages = {344--353},
publisher = {{ACM}},
year = {1997},
url = {https://doi.org/10.1145/267521.267894},
doi = {10.1145/267521.267894},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ZimmerL97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/gcb/1996,
editor = {Ralf Hofest{\"{a}}dt and
Thomas Lengauer and
Markus L{\"{o}}ffler and
Dietmar Schomburg},
title = {Bioinformatics, German Conference on Bioinformatics, Leipzig, Germany,
September 30 - October 2, 1996, Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {1278},
publisher = {Springer},
year = {1997},
url = {https://doi.org/10.1007/BFb0033198},
doi = {10.1007/BFB0033198},
isbn = {3-540-63370-7},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/gcb/1996.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/it/HofestadtLL96,
author = {Ralf Hofest{\"{a}}dt and
Markus L{\"{o}}ffler and
Thomas Lengauer},
title = {Editorial: Informatik in den Biowissenschaften},
journal = {Informationstechnik Tech. Inform.},
volume = {38},
number = {5},
pages = {5--7},
year = {1996},
url = {https://doi.org/10.1524/itit.1996.38.5.5},
doi = {10.1524/ITIT.1996.38.5.5},
timestamp = {Tue, 08 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/it/HofestadtLL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcamd/RareyWL96,
author = {Matthias Rarey and
Stephan Wefing and
Thomas Lengauer},
title = {Placement of medium-sized molecular fragments into active sites of
proteins},
journal = {J. Comput. Aided Mol. Des.},
volume = {10},
number = {1},
pages = {41--54},
year = {1996},
url = {https://doi.org/10.1007/BF00124464},
doi = {10.1007/BF00124464},
timestamp = {Thu, 16 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcamd/RareyWL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/KochLW96,
author = {Ina Koch and
Thomas Lengauer and
Egon Wanke},
title = {An Algorithm for Finding Maximal Common Subtopologies in a Set of
Protein Structures},
journal = {J. Comput. Biol.},
volume = {3},
number = {2},
pages = {289--306},
year = {1996},
url = {https://doi.org/10.1089/cmb.1996.3.289},
doi = {10.1089/CMB.1996.3.289},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/KochLW96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/HeckmannL96,
author = {Ralf Heckmann and
Thomas Lengauer},
editor = {Josep D{\'{\i}}az and
Maria J. Serna},
title = {Computing Upper and Lower Bounds on Textile Nesting Problems},
booktitle = {Algorithms - {ESA} '96, Fourth Annual European Symposium, Barcelona,
Spain, September 25-27, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1136},
pages = {392--405},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61680-2\_70},
doi = {10.1007/3-540-61680-2\_70},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/esa/HeckmannL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/LemmenL96,
author = {Christian Lemmen and
Thomas Lengauer},
title = {Time-Efficient Flexible Superposition of Medium-Sized Molecules and
Molecular Fragments},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1996,
Leipzig, Germany, September 30 - October 2, 1996},
pages = {257--259},
year = {1996},
timestamp = {Sat, 07 Sep 2019 11:59:23 +0200},
biburl = {https://dblp.org/rec/conf/gcb/LemmenL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/anor/HeckmannL95,
author = {Ralf Heckmann and
Thomas Lengauer},
title = {A simulated annealing approach to the nesting problem in the textile
manufacturing industry},
journal = {Ann. Oper. Res.},
volume = {57},
number = {1},
pages = {103--133},
year = {1995},
url = {https://doi.org/10.1007/BF02099693},
doi = {10.1007/BF02099693},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/anor/HeckmannL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/anor/HeistermannL95,
author = {J{\"{o}}rg Heistermann and
Thomas Lengauer},
title = {The nesting problem in the leather manufacturing industry},
journal = {Ann. Oper. Res.},
volume = {57},
number = {1},
pages = {147--173},
year = {1995},
url = {https://doi.org/10.1007/BF02099695},
doi = {10.1007/BF02099695},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/anor/HeistermannL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/date/SchmidtTTL95,
author = {H. Schmidt and
Dirk Theune and
Ralf Thiele and
Thomas Lengauer},
title = {EMC-driven midway routing on PCBs},
booktitle = {1995 European Design and Test Conference, ED{\&}TC 1995, Paris,
France, March 6-9, 1995},
pages = {486--491},
publisher = {{IEEE} Computer Society},
year = {1995},
url = {https://doi.org/10.1109/EDTC.1995.470357},
doi = {10.1109/EDTC.1995.470357},
timestamp = {Fri, 20 May 2022 15:41:46 +0200},
biburl = {https://dblp.org/rec/conf/date/SchmidtTTL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/FrankL95,
author = {Elof Frank and
Thomas Lengauer},
editor = {Richard L. Rudell},
title = {APPlaUSE: Area and performance optimization in a unified placement
and synthesis environment},
booktitle = {Proceedings of the 1995 {IEEE/ACM} International Conference on Computer-Aided
Design, {ICCAD} 1995, San Jose, California, USA, November 5-9, 1995},
pages = {662--667},
publisher = {{IEEE} Computer Society / {ACM}},
year = {1995},
url = {https://doi.org/10.1109/ICCAD.1995.480200},
doi = {10.1109/ICCAD.1995.480200},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/FrankL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/RareyKL95,
author = {Matthias Rarey and
Bernd Kramer and
Thomas Lengauer},
editor = {Christopher J. Rawlings and
Dominic A. Clark and
Russ B. Altman and
Lawrence Hunter and
Thomas Lengauer and
Shoshana J. Wodak},
title = {Time-Efficient Docking of Flexible Ligands into Active Sites of Proteins},
booktitle = {Proceedings of the Third International Conference on Intelligent Systems
for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995},
pages = {300--308},
publisher = {{AAAI}},
year = {1995},
url = {http://www.aaai.org/Library/ISMB/1995/ismb95-036.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/RareyKL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ThieleZL95,
author = {Ralf Thiele and
Ralf Zimmer and
Thomas Lengauer},
editor = {Christopher J. Rawlings and
Dominic A. Clark and
Russ B. Altman and
Lawrence Hunter and
Thomas Lengauer and
Shoshana J. Wodak},
title = {Recursive Dynamic Programming for Adaptive Sequence and Structure
Alignment},
booktitle = {Proceedings of the Third International Conference on Intelligent Systems
for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995},
pages = {384--392},
publisher = {{AAAI}},
year = {1995},
url = {http://www.aaai.org/Library/ISMB/1995/ismb95-046.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/ThieleZL95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/1995,
editor = {Christopher J. Rawlings and
Dominic A. Clark and
Russ B. Altman and
Lawrence Hunter and
Thomas Lengauer and
Shoshana J. Wodak},
title = {Proceedings of the Third International Conference on Intelligent Systems
for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995},
publisher = {{AAAI}},
year = {1995},
isbn = {0-929280-83-0},
timestamp = {Fri, 27 Jun 2003 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/1995.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/TheuneTJL94,
author = {Dirk Theune and
Ralf Thiele and
Werner John and
Thomas Lengauer},
title = {Robust methods for EMC-driven routing},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {13},
number = {11},
pages = {1366--1378},
year = {1994},
url = {https://doi.org/10.1109/43.329265},
doi = {10.1109/43.329265},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/TheuneTJL94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/LengauerW93,
author = {Thomas Lengauer and
Egon Wanke},
title = {Efficient Decision Procedures for Graph Properties on Centext-Free
Graph Languages},
journal = {J. {ACM}},
volume = {40},
number = {2},
pages = {368--393},
year = {1993},
url = {https://doi.org/10.1145/151261.151268},
doi = {10.1145/151261.151268},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/LengauerW93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ki/HofestadtKL93,
author = {Ralf Hofest{\"{a}}dt and
Fritz Kr{\"{u}}ckeberg and
Thomas Lengauer},
title = {1. Fachtagung "Informatik in den Biowissenschaften"},
journal = {K{\"{u}}nstliche Intell.},
volume = {7},
number = {3},
pages = {31},
year = {1993},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ki/HofestadtKL93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/LengauerM93,
author = {Thomas Lengauer and
Rolf M{\"{u}}ller},
title = {Robust and accurate hierarchical floorplanning with integrated global
wiring},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {12},
number = {6},
pages = {802--809},
year = {1993},
url = {https://doi.org/10.1109/43.229754},
doi = {10.1109/43.229754},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/LengauerM93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/Lengauer93,
author = {Thomas Lengauer},
editor = {Reinhard Wilhelm},
title = {Informatik in den technischen Disziplinen},
booktitle = {Informatik: Grundlagen - Amwendungen - Perspektiven [Forum "Perspektiven
der Informatik", Dagstuhl, November 1993]},
pages = {13--16},
publisher = {Verlag C. H. Beck},
year = {1993},
timestamp = {Wed, 10 Jul 2002 11:30:54 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/Lengauer93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/Lengauer93a,
author = {Thomas Lengauer},
editor = {Reinhard Wilhelm},
title = {Informatik in den Naturwissenschaften},
booktitle = {Informatik: Grundlagen - Amwendungen - Perspektiven [Forum "Perspektiven
der Informatik", Dagstuhl, November 1993]},
pages = {16--20},
publisher = {Verlag C. H. Beck},
year = {1993},
timestamp = {Wed, 10 Jul 2002 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/Lengauer93a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/istcs/Lengauer93,
author = {Thomas Lengauer},
title = {Algorithmic Research Problems in Molecular Bioinformatics},
booktitle = {Second Israel Symposium on Theory of Computing Systems, {ISTCS} 1993,
Natanya, Israel, June 7-9, 1993, Proceedings},
pages = {177--192},
publisher = {{IEEE} Computer Society},
year = {1993},
url = {https://doi.org/10.1109/ISTCS.1993.253471},
doi = {10.1109/ISTCS.1993.253471},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/istcs/Lengauer93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/soda/HeistermannL93,
author = {J{\"{o}}rg Heistermann and
Thomas Lengauer},
editor = {Vijaya Ramachandran},
title = {Efficient Automatic Part Nesting on Irregular and Inhomogeneous Surfaces},
booktitle = {Proceedings of the Fourth Annual {ACM/SIGACT-SIAM} Symposium on Discrete
Algorithms, 25-27 January 1993, Austin, Texas, {USA}},
pages = {251--259},
publisher = {{ACM/SIAM}},
year = {1993},
url = {http://dl.acm.org/citation.cfm?id=313559.313761},
timestamp = {Thu, 05 Jul 2018 07:29:11 +0200},
biburl = {https://dblp.org/rec/conf/soda/HeistermannL93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/ws/93/LengauerL93,
author = {Thomas Lengauer and
Martin L{\"{u}}gering},
editor = {Majid Sarrafzadeh and
D. T. Lee},
title = {Integer Program formulations of Global Routing and Placement Problems},
booktitle = {Algorithmic Aspects of {VLSI} Layout},
series = {Lecture Notes Series on Computing},
volume = {2},
pages = {167--197},
publisher = {World Scientific},
year = {1993},
url = {https://doi.org/10.1142/9789812794468\_0005},
doi = {10.1142/9789812794468\_0005},
timestamp = {Mon, 03 Apr 2023 16:01:56 +0200},
biburl = {https://dblp.org/rec/books/ws/93/LengauerL93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/biow/1993,
editor = {Ralf Hofest{\"{a}}dt and
Fritz Kr{\"{u}}ckeberg and
Thomas Lengauer},
title = {Informatik in den Biowissenschaften, 1. Fachtagung der {GI-FG} 4.0.3
"Informatik in den Biowissenschaften", Bonn, 15./16. Februar
1993, Proceedings},
series = {Informatik Aktuell},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/978-3-642-78072-1},
doi = {10.1007/978-3-642-78072-1},
isbn = {3-540-56456-X},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/biow/1993.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esa/1993,
editor = {Thomas Lengauer},
title = {Algorithms - {ESA} '93, First Annual European Symposium, Bad Honnef,
Germany, September 30 - October 2, 1993, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {726},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/3-540-57273-2},
doi = {10.1007/3-540-57273-2},
isbn = {3-540-57273-2},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/esa/1993.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/LengauerW92,
author = {Thomas Lengauer and
Klaus W. Wagner},
title = {The Correlation between the Complexities of the Nonhierarchical and
Hierarchical Versions of Graph Problems},
journal = {J. Comput. Syst. Sci.},
volume = {44},
number = {1},
pages = {63--93},
year = {1992},
url = {https://doi.org/10.1016/0022-0000(92)90004-3},
doi = {10.1016/0022-0000(92)90004-3},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcss/LengauerW92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dfg/HoftingLW92,
author = {Franz H{\"{o}}fting and
Thomas Lengauer and
Egon Wanke},
editor = {Burkhard Monien and
Thomas Ottmann},
title = {Processing of Hierarchically Defined Graphs and Graph Families},
booktitle = {Data Structures and Efficient Algorithms, Final Report on the {DFG}
Special Joint Initiative},
series = {Lecture Notes in Computer Science},
volume = {594},
pages = {44--69},
publisher = {Springer},
year = {1992},
url = {https://doi.org/10.1007/3-540-55488-2\_21},
doi = {10.1007/3-540-55488-2\_21},
timestamp = {Fri, 17 Jul 2020 16:12:47 +0200},
biburl = {https://dblp.org/rec/conf/dfg/HoftingLW92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/TheuneTLF92,
author = {Dirk Theune and
Ralf Thiele and
Thomas Lengauer and
Anja Feldmann},
editor = {Louise Trevillyan and
Michael R. Lightner},
title = {{HERO:} hierarchical EMC-constrained routing},
booktitle = {1992 {IEEE/ACM} International Conference on Computer-Aided Design,
{ICCAD} 1992, Santa Clara, CA, USA, November 8-12, 1992. Digest of
Technical Papers},
pages = {468--472},
publisher = {{IEEE} Computer Society / {ACM}},
year = {1992},
url = {https://doi.org/10.1109/ICCAD.1992.279326},
doi = {10.1109/ICCAD.1992.279326},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iccad/TheuneTLF92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/HeistermanL91,
author = {J{\"{o}}rg Heistermann and
Thomas Lengauer},
title = {The efficient solution of integer programs for hierarchical global
routing},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {10},
number = {6},
pages = {748--753},
year = {1991},
url = {https://doi.org/10.1109/43.137503},
doi = {10.1109/43.137503},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/HeistermanL91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eurodac/BuijsL91,
author = {Frank Buijs and
Thomas Lengauer},
editor = {Tony Ambler and
Jochen A. G. Jess and
Hugo De Man},
title = {Synthesis of multi-level logic with one symbolic input},
booktitle = {Proceedings of the conference on European design automation, EURO-DAC'91,
Amsterdam, The Netherlands, 1991},
pages = {60--64},
publisher = {{EEE} Computer Society},
year = {1991},
url = {http://dl.acm.org/citation.cfm?id=951527},
timestamp = {Tue, 17 Nov 2015 16:02:17 +0100},
biburl = {https://dblp.org/rec/conf/eurodac/BuijsL91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/LengauerT91,
author = {Thomas Lengauer and
Dirk Theune},
editor = {Javier Leach Albert and
Burkhard Monien and
Mario Rodr{\'{\i}}guez{-}Artalejo},
title = {Efficient Algorithms for Path Problems with Gernal Cost Citeria},
booktitle = {Automata, Languages and Programming, 18th International Colloquium,
ICALP91, Madrid, Spain, July 8-12, 1991, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {510},
pages = {314--326},
publisher = {Springer},
year = {1991},
url = {https://doi.org/10.1007/3-540-54233-7\_144},
doi = {10.1007/3-540-54233-7\_144},
timestamp = {Fri, 17 Jul 2020 16:12:48 +0200},
biburl = {https://dblp.org/rec/conf/icalp/LengauerT91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wads/LengauerT91,
author = {Thomas Lengauer and
Dirk Theune},
editor = {Frank K. H. A. Dehne and
J{\"{o}}rg{-}R{\"{u}}diger Sack and
Nicola Santoro},
title = {Unstructured Path Problems and the Making of Semirings (Preliminary
Version)},
booktitle = {Algorithms and Data Structures, 2nd Workshop {WADS} '91, Ottawa, Canada,
August 14-16, 1991, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {519},
pages = {189--200},
publisher = {Springer},
year = {1991},
url = {https://doi.org/10.1007/BFb0028261},
doi = {10.1007/BFB0028261},
timestamp = {Fri, 17 Jul 2020 16:12:48 +0200},
biburl = {https://dblp.org/rec/conf/wads/LengauerT91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/daglib/0068144,
author = {Thomas Lengauer},
title = {Combinatorial algorithms for integrated circuit layout},
series = {Applicable theory in computer science},
publisher = {Teubner},
year = {1990},
isbn = {978-0-471-92838-6},
timestamp = {Tue, 03 May 2011 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/daglib/0068144.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/LengauerW90,
author = {Thomas Lengauer and
Klaus W. Wagner},
title = {The Binary Network Flow Problem is Logspace Complete for {P}},
journal = {Theor. Comput. Sci.},
volume = {75},
number = {3},
pages = {357--363},
year = {1990},
url = {https://doi.org/10.1016/0304-3975(90)90101-M},
doi = {10.1016/0304-3975(90)90101-M},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/LengauerW90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccad/LengauerM90,
author = {Thomas Lengauer and
Rolf M{\"{u}}ller},
title = {A Robust Framework for Hierarchical Floorplanning with Integrated
Global Wiring},
booktitle = {{IEEE/ACM} International Conference on Computer-Aided Design, {ICCAD}
1990, Santa Clara, CA, USA, November 11-15, 1990. Digest of Technical
Papers},
pages = {148--151},
publisher = {{IEEE} Computer Society},
year = {1990},
url = {https://doi.org/10.1109/ICCAD.1990.129865},
doi = {10.1109/ICCAD.1990.129865},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccad/LengauerM90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/el/leeuwen90/Lengauer90,
author = {Thomas Lengauer},
editor = {Jan van Leeuwen},
title = {{VLSI} Theory},
booktitle = {Handbook of Theoretical Computer Science, Volume {A:} Algorithms and
Complexity},
pages = {835--868},
publisher = {Elsevier and {MIT} Press},
year = {1990},
timestamp = {Sat, 03 Aug 2019 19:26:43 +0200},
biburl = {https://dblp.org/rec/books/el/leeuwen90/Lengauer90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/stacs/1990,
editor = {Christian Choffrut and
Thomas Lengauer},
title = {{STACS} 90, 7th Annual Symposium on Theoretical Aspects of Computer
Science, Rouen, France, February 22-24, 1990, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {415},
publisher = {Springer},
year = {1990},
url = {https://doi.org/10.1007/3-540-52282-4},
doi = {10.1007/3-540-52282-4},
isbn = {3-540-52282-4},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/stacs/1990.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/Lengauer89,
author = {Thomas Lengauer},
title = {Hierarchical planarity testing algorithms},
journal = {J. {ACM}},
volume = {36},
number = {3},
pages = {474--509},
year = {1989},
url = {https://doi.org/10.1145/65950.65952},
doi = {10.1145/65950.65952},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/Lengauer89.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eatcs/LengauerW88,
author = {Thomas Lengauer and
Egon Wanke},
title = {Efficient processing of hierarchical graphs for engineering design},
journal = {Bull. {EATCS}},
volume = {35},
pages = {143--157},
year = {1988},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/eatcs/LengauerW88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mmor/LengauerM88,
author = {Thomas Lengauer and
Rolf M{\"{u}}ller},
title = {Linear arrangement problems on recursively partitioned graphs},
journal = {{ZOR} Methods Model. Oper. Res.},
volume = {32},
number = {3-4},
pages = {213--230},
year = {1988},
url = {https://doi.org/10.1007/BF01928924},
doi = {10.1007/BF01928924},
timestamp = {Mon, 18 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mmor/LengauerM88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/LengauerW88,
author = {Thomas Lengauer and
Egon Wanke},
title = {Efficient Solution of Connectivity Problems on Hierarchically Defined
Graphs},
journal = {{SIAM} J. Comput.},
volume = {17},
number = {6},
pages = {1063--1080},
year = {1988},
url = {https://doi.org/10.1137/0217068},
doi = {10.1137/0217068},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/LengauerW88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/LengauerW88,
author = {Thomas Lengauer and
Egon Wanke},
editor = {Timo Lepist{\"{o}} and
Arto Salomaa},
title = {Efficient Analysis of Graph Properties on Context-free Graph Languages
(Extended Abstract)},
booktitle = {Automata, Languages and Programming, 15th International Colloquium,
ICALP88, Tampere, Finland, July 11-15, 1988, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {317},
pages = {379--393},
publisher = {Springer},
year = {1988},
url = {https://doi.org/10.1007/3-540-19488-6\_129},
doi = {10.1007/3-540-19488-6\_129},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/LengauerW88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computing/LengauerW87,
author = {Thomas Lengauer and
Christian Wieners},
title = {Efficient solutions of hierarchical systems of linear equations},
journal = {Computing},
volume = {39},
number = {2},
pages = {111--132},
year = {1987},
url = {https://doi.org/10.1007/BF02310101},
doi = {10.1007/BF02310101},
timestamp = {Thu, 06 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/computing/LengauerW87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Lengauer87,
author = {Thomas Lengauer},
title = {Efficient Algorithms for Finding Minimum Spanning Forests of Hierarchically
Defined Graphs},
journal = {J. Algorithms},
volume = {8},
number = {2},
pages = {260--284},
year = {1987},
url = {https://doi.org/10.1016/0196-6774(87)90042-3},
doi = {10.1016/0196-6774(87)90042-3},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Lengauer87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcad/DoenhardtL87,
author = {J{\"{u}}rgen Doenhardt and
Thomas Lengauer},
title = {Algorithmic Aspects of One-Dimensional Layout Compaction},
journal = {{IEEE} Trans. Comput. Aided Des. Integr. Circuits Syst.},
volume = {6},
number = {5},
pages = {863--878},
year = {1987},
url = {https://doi.org/10.1109/TCAD.1987.1270329},
doi = {10.1109/TCAD.1987.1270329},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcad/DoenhardtL87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/LengauerW87,
author = {Thomas Lengauer and
Klaus W. Wagner},
editor = {Franz{-}Josef Brandenburg and
Guy Vidal{-}Naquet and
Martin Wirsing},
title = {The Correlation Between the Complexities of the Nonhierarchical and
Hierarchical Versions of Graph Problems},
booktitle = {{STACS} 87, 4th Annual Symposium on Theoretical Aspects of Computer
Science, Passau, Germany, February 19-21, 1987, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {247},
pages = {100--113},
publisher = {Springer},
year = {1987},
url = {https://doi.org/10.1007/BFb0039598},
doi = {10.1007/BFB0039598},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/stacs/LengauerW87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/integration/LengauerN86,
author = {Thomas Lengauer and
Stefan N{\"{a}}her},
title = {An analysis of ternary simulation as a tool for race detection in
digital {MOS} circuits},
journal = {Integr.},
volume = {4},
number = {4},
pages = {309--330},
year = {1986},
url = {https://doi.org/10.1016/0167-9260(86)90012-X},
doi = {10.1016/0167-9260(86)90012-X},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/integration/LengauerN86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/awoc/MullerL86,
author = {Rolf M{\"{u}}ller and
Thomas Lengauer},
editor = {Fillia Makedon and
Kurt Mehlhorn and
Theodore S. Papatheodorou and
Paul G. Spirakis},
title = {Linear Algorithms For Two {CMOS} Layout Problems},
booktitle = {{VLSI} Algorithms and Architectures, Aegean Workshop on Computing,
Loutraki, Greece, July 8-11, 1986, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {227},
pages = {121--132},
publisher = {Springer},
year = {1986},
url = {https://doi.org/10.1007/3-540-16766-8\_11},
doi = {10.1007/3-540-16766-8\_11},
timestamp = {Tue, 14 May 2019 10:00:47 +0200},
biburl = {https://dblp.org/rec/conf/awoc/MullerL86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/awoc/Lengauer86,
author = {Thomas Lengauer},
editor = {Fillia Makedon and
Kurt Mehlhorn and
Theodore S. Papatheodorou and
Paul G. Spirakis},
title = {Exploiting Hierarchy in {VLSI} Design},
booktitle = {{VLSI} Algorithms and Architectures, Aegean Workshop on Computing,
Loutraki, Greece, July 8-11, 1986, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {227},
pages = {180--193},
publisher = {Springer},
year = {1986},
url = {https://doi.org/10.1007/3-540-16766-8\_16},
doi = {10.1007/3-540-16766-8\_16},
timestamp = {Fri, 19 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/awoc/Lengauer86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gi/Lengauer86,
author = {Thomas Lengauer},
editor = {G{\"{u}}nter Hommel and
Sigram Schindler},
title = {Hierarchische Darstellung geometrischer Objekte und ihre algorithmische
Bedeutung},
booktitle = {{GI} - 16. Jahrestagung I, Berlin, 6.-10. Oktober 1986, Proceedings},
series = {Informatik-Fachberichte},
volume = {126},
pages = {456--469},
publisher = {Springer},
year = {1986},
url = {https://doi.org/10.1007/978-3-642-71388-0\_36},
doi = {10.1007/978-3-642-71388-0\_36},
timestamp = {Tue, 23 May 2017 01:10:32 +0200},
biburl = {https://dblp.org/rec/conf/gi/Lengauer86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/Lengauer86,
author = {Thomas Lengauer},
editor = {Laurent Kott},
title = {Hierarchical Planary Testing Algorithms},
booktitle = {Automata, Languages and Programming, 13th International Colloquium,
ICALP86, Rennes, France, July 15-19, 1986, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {226},
pages = {215--225},
publisher = {Springer},
year = {1986},
url = {https://doi.org/10.1007/3-540-16761-7\_71},
doi = {10.1007/3-540-16761-7\_71},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/Lengauer86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/Lengauer86,
author = {Thomas Lengauer},
editor = {Burkhard Monien and
Guy Vidal{-}Naquet},
title = {Efficient Algorithms for Finding Minimum Spanning Forests of Hierarchically
Defined Graphs},
booktitle = {{STACS} 86, 3rd Annual Symposium on Theoretical Aspects of Computer
Science, Orsay, France, January 16-18, 1986, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {210},
pages = {153--170},
publisher = {Springer},
year = {1986},
url = {https://doi.org/10.1007/3-540-16078-7\_73},
doi = {10.1007/3-540-16078-7\_73},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/stacs/Lengauer86.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Lengauer84,
author = {Thomas Lengauer},
title = {On the Solution of Inequality Systems Relevant to IC-Layout},
journal = {J. Algorithms},
volume = {5},
number = {3},
pages = {408--421},
year = {1984},
url = {https://doi.org/10.1016/0196-6774(84)90020-8},
doi = {10.1016/0196-6774(84)90020-8},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Lengauer84.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gi/Lengauer84,
author = {Thomas Lengauer},
editor = {Hans{-}Dieter Ehrich},
title = {Algorithmische Spezifikation von symbolischen Layouts integrierter
Schaltkreise},
booktitle = {Fachgespr{\"{a}}che auf der 14. GI-Jahrestagung, Braunschweig,
1.-2. Oktober 1984, Proceedings},
series = {Informatik-Fachberichte},
volume = {89},
pages = {5--16},
publisher = {Springer},
year = {1984},
url = {https://doi.org/10.1007/978-3-642-70087-3\_1},
doi = {10.1007/978-3-642-70087-3\_1},
timestamp = {Tue, 23 May 2017 01:10:32 +0200},
biburl = {https://dblp.org/rec/conf/gi/Lengauer84.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wg/Lengauer83,
author = {Thomas Lengauer},
editor = {Manfred Nagl and
J{\"{u}}rgen Perl},
title = {Efficient Algorithms for the Constraint Generation for Integrated
Circuit Layout Compaction},
booktitle = {Proceedings of the {WG} '83, International Workshop on Graphtheoretic
Concepts in Computer Science, June 16-18, 1983, Haus Ohrbeck, near
Osnabr{\"{u}}ck, Germany},
pages = {219--230},
publisher = {Universit{\"{a}}tsverlag Rudolf Trauner, Linz},
year = {1983},
timestamp = {Thu, 12 Mar 2020 11:37:19 +0100},
biburl = {https://dblp.org/rec/conf/wg/Lengauer83.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/insk/Lengauer82,
author = {Thomas Lengauer},
title = {Cube-Connected Cycles - Shuffle Exchange Graph - Das aktuelle Schlagwort},
journal = {Inform. Spektrum},
volume = {5},
number = {3},
pages = {192--194},
year = {1982},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/insk/Lengauer82.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/LengauerT82,
author = {Thomas Lengauer and
Robert Endre Tarjan},
title = {Asymptotically tight bounds on time-space trade-offs in a pebble game},
journal = {J. {ACM}},
volume = {29},
number = {4},
pages = {1087--1130},
year = {1982},
url = {https://doi.org/10.1145/322344.322354},
doi = {10.1145/322344.322354},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jacm/LengauerT82.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/focs/Lengauer82,
author = {Thomas Lengauer},
title = {The Complexity of Compacting Hierarchically Specified Layouts of Integrated
Circuits (Preliminary Version)},
booktitle = {23rd Annual Symposium on Foundations of Computer Science, Chicago,
Illinois, USA, 3-5 November 1982},
pages = {358--368},
publisher = {{IEEE} Computer Society},
year = {1982},
url = {https://doi.org/10.1109/SFCS.1982.92},
doi = {10.1109/SFCS.1982.92},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/focs/Lengauer82.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wg/Lengauer82,
author = {Thomas Lengauer},
editor = {Hans J{\"{u}}rgen Schneider and
Herbert G{\"{o}}ttler},
title = {On the Solution of Inequality Systems Relevant to IC-Layout},
booktitle = {Proceedings of the 8th Conference Graphtheoretic Concepts in Computer
Science {(WG} '82), Neuenkirchen (near Erlangen), Germany},
pages = {151--164},
publisher = {Hanser, Munich},
year = {1982},
timestamp = {Thu, 04 Feb 2021 13:01:49 +0100},
biburl = {https://dblp.org/rec/conf/wg/Lengauer82.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/acta/Lengauer81,
author = {Thomas Lengauer},
title = {Black-White Pebbles and Graph Separation},
journal = {Acta Informatica},
volume = {16},
pages = {465--475},
year = {1981},
url = {https://doi.org/10.1007/BF00264496},
doi = {10.1007/BF00264496},
timestamp = {Sun, 21 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/acta/Lengauer81.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/LengauerT80,
author = {Thomas Lengauer and
Robert Endre Tarjan},
title = {The Space Complexity of Pebble Games on Trees},
journal = {Inf. Process. Lett.},
volume = {10},
number = {4/5},
pages = {184--188},
year = {1980},
url = {https://doi.org/10.1016/0020-0190(80)90136-2},
doi = {10.1016/0020-0190(80)90136-2},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/LengauerT80.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/GilbertLT80,
author = {John R. Gilbert and
Thomas Lengauer and
Robert Endre Tarjan},
title = {The Pebbling Problem is Complete in Polynomial Space},
journal = {{SIAM} J. Comput.},
volume = {9},
number = {3},
pages = {513--524},
year = {1980},
url = {https://doi.org/10.1137/0209038},
doi = {10.1137/0209038},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/GilbertLT80.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/us/Lengauer79,
author = {Thomas Lengauer},
title = {Upper and lower bounds on time-space tradeoffs in a pebble game},
school = {Stanford University, {USA}},
year = {1979},
url = {https://searchworks.stanford.edu/view/806214},
timestamp = {Tue, 23 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/us/Lengauer79.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/toplas/LengauerT79,
author = {Thomas Lengauer and
Robert Endre Tarjan},
title = {A Fast Algorithm for Finding Dominators in a Flowgraph},
journal = {{ACM} Trans. Program. Lang. Syst.},
volume = {1},
number = {1},
pages = {121--141},
year = {1979},
url = {https://doi.org/10.1145/357062.357071},
doi = {10.1145/357062.357071},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/toplas/LengauerT79.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/GilbertLT79,
author = {John R. Gilbert and
Thomas Lengauer and
Robert Endre Tarjan},
editor = {Michael J. Fischer and
Richard A. DeMillo and
Nancy A. Lynch and
Walter A. Burkhard and
Alfred V. Aho},
title = {The Pebbling Problem is Complete in Polynomial Space},
booktitle = {Proceedings of the 11h Annual {ACM} Symposium on Theory of Computing,
April 30 - May 2, 1979, Atlanta, Georgia, {USA}},
pages = {237--248},
publisher = {{ACM}},
year = {1979},
url = {https://doi.org/10.1145/800135.804418},
doi = {10.1145/800135.804418},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/GilbertLT79.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stoc/LengauerT79,
author = {Thomas Lengauer and
Robert Endre Tarjan},
editor = {Michael J. Fischer and
Richard A. DeMillo and
Nancy A. Lynch and
Walter A. Burkhard and
Alfred V. Aho},
title = {Upper and Lower Bounds on Time-Space Tradeoffs},
booktitle = {Proceedings of the 11h Annual {ACM} Symposium on Theory of Computing,
April 30 - May 2, 1979, Atlanta, Georgia, {USA}},
pages = {262--277},
publisher = {{ACM}},
year = {1979},
url = {https://doi.org/10.1145/800135.804420},
doi = {10.1145/800135.804420},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stoc/LengauerT79.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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