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ORCIDBibTeX records: Jens Lagergren
@article{DBLP:journals/corr/abs-2403-00563,
author = {Alfred Nilsson and
Klas Wijk and
Sai Bharath Chandra Gutha and
Erik Englesson and
Alexandra Hotti and
Carlo Saccardi and
Oskar Kviman and
Jens Lagergren and
Ricardo Vinuesa and
Hossein Azizpour},
title = {Indirectly Parameterized Concrete Autoencoders},
journal = {CoRR},
volume = {abs/2403.00563},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.00563},
doi = {10.48550/ARXIV.2403.00563},
eprinttype = {arXiv},
eprint = {2403.00563},
timestamp = {Tue, 02 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-00563.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/KvimanMHKEL23,
author = {Oskar Kviman and
Ricky Mol{\'{e}}n and
Alexandra Hotti and
Semih Kurt and
V{\'{\i}}ctor Elvira and
Jens Lagergren},
editor = {Andreas Krause and
Emma Brunskill and
Kyunghyun Cho and
Barbara Engelhardt and
Sivan Sabato and
Jonathan Scarlett},
title = {Cooperation in the Latent Space: The Benefits of Adding Mixture Components
in Variational Autoencoders},
booktitle = {International Conference on Machine Learning, {ICML} 2023, 23-29 July
2023, Honolulu, Hawaii, {USA}},
series = {Proceedings of Machine Learning Research},
volume = {202},
pages = {18008--18022},
publisher = {{PMLR}},
year = {2023},
url = {https://proceedings.mlr.press/v202/kviman23a.html},
timestamp = {Mon, 28 Aug 2023 17:23:08 +0200},
biburl = {https://dblp.org/rec/conf/icml/KvimanMHKEL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-05497,
author = {Ludvig Bergenstr{\aa}hle and
Jens Lagergren and
Joakim Lundeberg},
title = {Learning Stationary Markov Processes with Contrastive Adjustment},
journal = {CoRR},
volume = {abs/2303.05497},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2303.05497},
doi = {10.48550/ARXIV.2303.05497},
eprinttype = {arXiv},
eprint = {2303.05497},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2303-05497.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-00941,
author = {Oskar Kviman and
Ricky Mol{\'{e}}n and
Jens Lagergren},
title = {Improved Variational Bayesian Phylogenetic Inference using Mixtures},
journal = {CoRR},
volume = {abs/2310.00941},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2310.00941},
doi = {10.48550/ARXIV.2310.00941},
eprinttype = {arXiv},
eprint = {2310.00941},
timestamp = {Wed, 18 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2310-00941.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BonetCDHGLL22,
author = {Jos{\'{e}} Bonet and
Mandi Chen and
Marc Dabad and
Simon Heath and
Abel Gonzalez{-}Perez and
N{\'{u}}ria L{\'{o}}pez{-}Bigas and
Jens Lagergren},
title = {DeepMP: a deep learning tool to detect {DNA} base modifications on
Nanopore sequencing data},
journal = {Bioinform.},
volume = {38},
number = {5},
pages = {1235--1243},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btab745},
doi = {10.1093/BIOINFORMATICS/BTAB745},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BonetCDHGLL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/NeyshabouriL22,
author = {Mohammadreza Mohaghegh Neyshabouri and
Jens Lagergren},
title = {ToMExO: {A} probabilistic tree-structured model for cancer progression},
journal = {PLoS Comput. Biol.},
volume = {18},
number = {12},
pages = {1010732},
year = {2022},
url = {https://doi.org/10.1371/journal.pcbi.1010732},
doi = {10.1371/JOURNAL.PCBI.1010732},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/NeyshabouriL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aistats/KvimanMKEL22,
author = {Oskar Kviman and
Harald Melin and
Hazal Koptagel and
Victor Elvira and
Jens Lagergren},
editor = {Gustau Camps{-}Valls and
Francisco J. R. Ruiz and
Isabel Valera},
title = {Multiple Importance Sampling {ELBO} and Deep Ensembles of Variational
Approximations},
booktitle = {International Conference on Artificial Intelligence and Statistics,
{AISTATS} 2022, 28-30 March 2022, Virtual Event},
series = {Proceedings of Machine Learning Research},
volume = {151},
pages = {10687--10702},
publisher = {{PMLR}},
year = {2022},
url = {https://proceedings.mlr.press/v151/kviman22a.html},
timestamp = {Sat, 30 Sep 2023 09:34:08 +0200},
biburl = {https://dblp.org/rec/conf/aistats/KvimanMKEL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/KoptagelKMSL22,
author = {Hazal Koptagel and
Oskar Kviman and
Harald Melin and
Negar Safinianaini and
Jens Lagergren},
editor = {Sanmi Koyejo and
S. Mohamed and
A. Agarwal and
Danielle Belgrave and
K. Cho and
A. Oh},
title = {VaiPhy: a Variational Inference Based Algorithm for Phylogeny},
booktitle = {Advances in Neural Information Processing Systems 35: Annual Conference
on Neural Information Processing Systems 2022, NeurIPS 2022, New Orleans,
LA, USA, November 28 - December 9, 2022},
year = {2022},
url = {http://papers.nips.cc/paper\_files/paper/2022/hash/5e956fef0946dc1e39760f94b78045fe-Abstract-Conference.html},
timestamp = {Mon, 08 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/nips/KoptagelKMSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2202-10951,
author = {Oskar Kviman and
Harald Melin and
Hazal Koptagel and
V{\'{\i}}ctor Elvira and
Jens Lagergren},
title = {Multiple Importance Sampling {ELBO} and Deep Ensembles of Variational
Approximations},
journal = {CoRR},
volume = {abs/2202.10951},
year = {2022},
url = {https://arxiv.org/abs/2202.10951},
eprinttype = {arXiv},
eprint = {2202.10951},
timestamp = {Wed, 02 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2202-10951.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-01121,
author = {Hazal Koptagel and
Oskar Kviman and
Harald Melin and
Negar Safinianaini and
Jens Lagergren},
title = {VaiPhy: a Variational Inference Based Algorithm for Phylogeny},
journal = {CoRR},
volume = {abs/2203.01121},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.01121},
doi = {10.48550/ARXIV.2203.01121},
eprinttype = {arXiv},
eprint = {2203.01121},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-01121.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-15514,
author = {Oskar Kviman and
Ricky Mol{\'{e}}n and
Alexandra Hotti and
Semih Kurt and
V{\'{\i}}ctor Elvira and
Jens Lagergren},
title = {Learning with {MISELBO:} The Mixture Cookbook},
journal = {CoRR},
volume = {abs/2209.15514},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.15514},
doi = {10.48550/ARXIV.2209.15514},
eprinttype = {arXiv},
eprint = {2209.15514},
timestamp = {Thu, 06 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-15514.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2212-12290,
author = {Oskar Kviman and
Hazal Koptagel and
Harald Melin and
Jens Lagergren},
title = {Statistical Distance Based Deterministic Offspring Selection in {SMC}
Methods},
journal = {CoRR},
volume = {abs/2212.12290},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2212.12290},
doi = {10.48550/ARXIV.2212.12290},
eprinttype = {arXiv},
eprint = {2212.12290},
timestamp = {Mon, 02 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2212-12290.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2111-02168,
author = {Alexandra Hotti and
Riccardo Sven Risuleo and
Stefan Magureanu and
Aref Moradi and
Jens Lagergren},
title = {The Klarna Product Page Dataset: {A} Realistic Benchmark for Web Representation
Learning},
journal = {CoRR},
volume = {abs/2111.02168},
year = {2021},
url = {https://arxiv.org/abs/2111.02168},
eprinttype = {arXiv},
eprint = {2111.02168},
timestamp = {Wed, 10 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2111-02168.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/NeyshabouriJL20,
author = {Mohammadreza Mohaghegh Neyshabouri and
Seong{-}Hwan Jun and
Jens Lagergren},
title = {Inferring tumor progression in large datasets},
journal = {PLoS Comput. Biol.},
volume = {16},
number = {10},
year = {2020},
url = {https://doi.org/10.1371/journal.pcbi.1008183},
doi = {10.1371/JOURNAL.PCBI.1008183},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/NeyshabouriJL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/SafinianainiSBL20,
author = {Negar Safinianaini and
Camila P. E. de Souza and
Henrik Bostr{\"{o}}m and
Jens Lagergren},
editor = {Frank Hutter and
Kristian Kersting and
Jefrey Lijffijt and
Isabel Valera},
title = {Orthogonal Mixture of Hidden Markov Models},
booktitle = {Machine Learning and Knowledge Discovery in Databases - European Conference,
{ECML} {PKDD} 2020, Ghent, Belgium, September 14-18, 2020, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {12457},
pages = {509--525},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-67658-2\_29},
doi = {10.1007/978-3-030-67658-2\_29},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pkdd/SafinianainiSBL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/FranbergSHcFLS17,
author = {Mattias Fr{\aa}nberg and
Rona J. Strawbridge and
Anders Hamsten and
PROCARDIS consortium and
Ulf de Faire and
Jens Lagergren and
Bengt Sennblad},
title = {Fast and general tests of genetic interaction for genome-wide association
studies},
journal = {PLoS Comput. Biol.},
volume = {13},
number = {6},
year = {2017},
url = {https://doi.org/10.1371/journal.pcbi.1005556},
doi = {10.1371/JOURNAL.PCBI.1005556},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/FranbergSHcFLS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KhanMUAL16,
author = {Mehmood Alam Khan and
Owais Mahmudi and
Ikram Ullah and
Lars Arvestad and
Jens Lagergren},
title = {Probabilistic inference of lateral gene transfer events},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-14}},
pages = {263--270},
year = {2016},
url = {https://doi.org/10.1186/s12859-016-1268-2},
doi = {10.1186/S12859-016-1268-2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KhanMUAL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BeerenwinkelGL16,
author = {Niko Beerenwinkel and
Chris D. Greenman and
Jens Lagergren},
title = {Computational Cancer Biology: An Evolutionary Perspective},
journal = {PLoS Comput. Biol.},
volume = {12},
number = {2},
year = {2016},
url = {https://doi.org/10.1371/journal.pcbi.1004717},
doi = {10.1371/JOURNAL.PCBI.1004717},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BeerenwinkelGL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ZhangKZL16,
author = {Kerry Zhang and
Jussi Karlgren and
Cheng Zhang and
Jens Lagergren},
title = {Viewpoint and Topic Modeling of Current Events},
journal = {CoRR},
volume = {abs/1608.04089},
year = {2016},
url = {http://arxiv.org/abs/1608.04089},
eprinttype = {arXiv},
eprint = {1608.04089},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/ZhangKZL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aistats/ParviainenFL14,
author = {Pekka Parviainen and
Hossein Shahrabi Farahani and
Jens Lagergren},
title = {Learning Bounded Tree-width Bayesian Networks using Integer Linear
Programming},
booktitle = {Proceedings of the Seventeenth International Conference on Artificial
Intelligence and Statistics, {AISTATS} 2014, Reykjavik, Iceland, April
22-25, 2014},
series = {{JMLR} Workshop and Conference Proceedings},
volume = {33},
pages = {751--759},
publisher = {JMLR.org},
year = {2014},
url = {http://proceedings.mlr.press/v33/parviainen14.html},
timestamp = {Wed, 29 May 2019 08:41:44 +0200},
biburl = {https://dblp.org/rec/conf/aistats/ParviainenFL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SjostrandALS13,
author = {Joel Sj{\"{o}}strand and
Lars Arvestad and
Jens Lagergren and
Bengt Sennblad},
title = {GenPhyloData: realistic simulation of gene family evolution},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {209},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-209},
doi = {10.1186/1471-2105-14-209},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SjostrandALS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KhanESNGSSLA13,
author = {Mehmood Alam Khan and
Isaac Elias and
Erik Sj{\"{o}}lund and
Kristina Nylander and
Roman Valls Guimera and
Richard Schobesberger and
Peter Schmitzberger and
Jens Lagergren and
Lars Arvestad},
title = {fastphylo: Fast tools for phylogenetics},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {334},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-334},
doi = {10.1186/1471-2105-14-334},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KhanESNGSSLA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MahmudiSSL13,
author = {Owais Mahmudi and
Joel Sj{\"{o}}strand and
Bengt Sennblad and
Jens Lagergren},
title = {Genome-wide probabilistic reconciliation analysis across vertebrates},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-15}},
pages = {S10},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S15-S10},
doi = {10.1186/1471-2105-14-S15-S10},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MahmudiSSL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SjostrandSAL12,
author = {Joel Sj{\"{o}}strand and
Bengt Sennblad and
Lars Arvestad and
Jens Lagergren},
title = {{DLRS:} gene tree evolution in light of a species tree},
journal = {Bioinform.},
volume = {28},
number = {22},
pages = {2994--2995},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts548},
doi = {10.1093/BIOINFORMATICS/BTS548},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SjostrandSAL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/TofighHL11,
author = {Ali Tofigh and
Michael T. Hallett and
Jens Lagergren},
title = {Simultaneous Identification of Duplications and Lateral Gene Transfers},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {2},
pages = {517--535},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2010.14},
doi = {10.1109/TCBB.2010.14},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/TofighHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/TofighSHL11,
author = {Ali Tofigh and
Erik Sj{\"{o}}lund and
Mattias H{\"{o}}glund and
Jens Lagergren},
editor = {John Shawe{-}Taylor and
Richard S. Zemel and
Peter L. Bartlett and
Fernando C. N. Pereira and
Kilian Q. Weinberger},
title = {A Global Structural {EM} Algorithm for a Model of Cancer Progression},
booktitle = {Advances in Neural Information Processing Systems 24: 25th Annual
Conference on Neural Information Processing Systems 2011. Proceedings
of a meeting held 12-14 December 2011, Granada, Spain},
pages = {163--171},
year = {2011},
url = {https://proceedings.neurips.cc/paper/2011/hash/9b8619251a19057cff70779273e95aa6-Abstract.html},
timestamp = {Mon, 16 May 2022 15:41:51 +0200},
biburl = {https://dblp.org/rec/conf/nips/TofighSHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EnsteroALWFOL10,
author = {Mats Enster{\"{o}} and
{\"{O}}rjan {\AA}kerborg and
Daniel Lundin and
Bei Wang and
Terrence S. Furey and
Marie {\"{O}}hman and
Jens Lagergren},
title = {A computational screen for site selective A-to-I editing detects novel
sites in neuron specific Hu proteins},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-6},
doi = {10.1186/1471-2105-11-6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/EnsteroALWFOL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/ArvestadLS09,
author = {Lars Arvestad and
Jens Lagergren and
Bengt Sennblad},
title = {The gene evolution model and computing its associated probabilities},
journal = {J. {ACM}},
volume = {56},
number = {2},
pages = {7:1--7:44},
year = {2009},
url = {https://doi.org/10.1145/1502793.1502796},
doi = {10.1145/1502793.1502796},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/ArvestadLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/EliasL09,
author = {Isaac Elias and
Jens Lagergren},
title = {Fast neighbor joining},
journal = {Theor. Comput. Sci.},
volume = {410},
number = {21-23},
pages = {1993--2000},
year = {2009},
url = {https://doi.org/10.1016/j.tcs.2008.12.040},
doi = {10.1016/J.TCS.2008.12.040},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/EliasL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/wabi/2008,
editor = {Keith A. Crandall and
Jens Lagergren},
title = {Algorithms in Bioinformatics, 8th International Workshop, {WABI} 2008,
Karlsruhe, Germany, September 15-19, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5251},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-87361-7},
doi = {10.1007/978-3-540-87361-7},
isbn = {978-3-540-87360-0},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/2008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EliasL07,
author = {Isaac Elias and
Jens Lagergren},
title = {Fast computation of distance estimators},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-89},
doi = {10.1186/1471-2105-8-89},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/EliasL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SennbladSSLA07,
author = {Bengt Sennblad and
Eva Schreil and
Ann{-}Charlotte Berglund Sonnhammer and
Jens Lagergren and
Lars Arvestad},
title = {primetv: a viewer for reconciled trees},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-148},
doi = {10.1186/1471-2105-8-148},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SennbladSSLA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AnderssonL07,
author = {Samuel A. Andersson and
Jens Lagergren},
title = {Motif Yggdrasil: Sampling Sequence Motifs from a Tree Mixture Model},
journal = {J. Comput. Biol.},
volume = {14},
number = {5},
pages = {682--697},
year = {2007},
url = {https://doi.org/10.1089/cmb.2007.R010},
doi = {10.1089/CMB.2007.R010},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/AnderssonL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HjelmHL06,
author = {Marcus Hjelm and
Mattias H{\"{o}}glund and
Jens Lagergren},
title = {New Probabilistic Network Models and Algorithms for Oncogenesis},
journal = {J. Comput. Biol.},
volume = {13},
number = {4},
pages = {853--865},
year = {2006},
url = {https://doi.org/10.1089/cmb.2006.13.853},
doi = {10.1089/CMB.2006.13.853},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/HjelmHL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SvenssonAL06,
author = {{\"{O}}rjan Svensson and
Lars Arvestad and
Jens Lagergren},
title = {Genome-Wide Survey for Biologically Functional Pseudogenes},
journal = {PLoS Comput. Biol.},
volume = {2},
number = {5},
year = {2006},
url = {https://doi.org/10.1371/journal.pcbi.0020046},
doi = {10.1371/JOURNAL.PCBI.0020046},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/SvenssonAL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BryantL06,
author = {David Bryant and
Jens Lagergren},
title = {Compatibility of unrooted phylogenetic trees is {FPT}},
journal = {Theor. Comput. Sci.},
volume = {351},
number = {3},
pages = {296--302},
year = {2006},
url = {https://doi.org/10.1016/j.tcs.2005.10.033},
doi = {10.1016/J.TCS.2005.10.033},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/BryantL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/AnderssonL06,
author = {Samuel A. Andersson and
Jens Lagergren},
editor = {Alberto Apostolico and
Concettina Guerra and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Motif Yggdrasil: Sampling from a Tree Mixture Model},
booktitle = {Research in Computational Molecular Biology, 10th Annual International
Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3909},
pages = {458--472},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11732990\_39},
doi = {10.1007/11732990\_39},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/AnderssonL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/EliasL05,
author = {Isaac Elias and
Jens Lagergren},
editor = {Lu{\'{\i}}s Caires and
Giuseppe F. Italiano and
Lu{\'{\i}}s Monteiro and
Catuscia Palamidessi and
Moti Yung},
title = {Fast Neighbor Joining},
booktitle = {Automata, Languages and Programming, 32nd International Colloquium,
{ICALP} 2005, Lisbon, Portugal, July 11-15, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3580},
pages = {1263--1274},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11523468\_102},
doi = {10.1007/11523468\_102},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/EliasL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2004rcg,
editor = {Jens Lagergren},
title = {Comparative Genomics, {RECOMB} 2004 International Workshop, {RCG}
2004, Bertinoro, Italy, October 16-19, 2004, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {3388},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/b105486},
doi = {10.1007/B105486},
isbn = {3-540-24455-7},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/2004rcg.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/Addario-BerryCHLPW04,
author = {Louigi Addario{-}Berry and
Benny Chor and
Michael T. Hallett and
Jens Lagergren and
Alessandro Panconesi and
Todd Wareham},
title = {Ancestral Maximum Likelihood of Evolutionary Trees Is Hard},
journal = {J. Bioinform. Comput. Biol.},
volume = {2},
number = {2},
pages = {257--272},
year = {2004},
url = {https://doi.org/10.1142/S0219720004000557},
doi = {10.1142/S0219720004000557},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/Addario-BerryCHLPW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlkemaJLW04,
author = {Wynand Alkema and
{\"{O}}jvind Johansson and
Jens Lagergren and
Wyeth W. Wasserman},
title = {{MSCAN:} identification of functional clusters of transcription factor
binding sites},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {195--198},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh387},
doi = {10.1093/NAR/GKH387},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AlkemaJLW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/IvanssonL04,
author = {Lars Ivansson and
Jens Lagergren},
title = {Algorithms for {RH} Mapping: New Ideas and Improved Analysis},
journal = {{SIAM} J. Comput.},
volume = {34},
number = {1},
pages = {89--108},
year = {2004},
url = {https://doi.org/10.1137/S0097539701388355},
doi = {10.1137/S0097539701388355},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/IvanssonL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ArvestadBLS04,
author = {Lars Arvestad and
Ann{-}Charlotte Berglund and
Jens Lagergren and
Bengt Sennblad},
editor = {Philip E. Bourne and
Dan Gusfield},
title = {Gene tree reconstruction and orthology analysis based on an integrated
model for duplications and sequence evolution},
booktitle = {Proceedings of the Eighth Annual International Conference on Computational
Molecular Biology, 2004, San Diego, California, USA, March 27-31,
2004},
pages = {326--335},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/974614.974657},
doi = {10.1145/974614.974657},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ArvestadBLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HallettLT04,
author = {Michael T. Hallett and
Jens Lagergren and
Ali Tofigh},
editor = {Philip E. Bourne and
Dan Gusfield},
title = {Simultaneous identification of duplications and lateral transfers},
booktitle = {Proceedings of the Eighth Annual International Conference on Computational
Molecular Biology, 2004, San Diego, California, USA, March 27-31,
2004},
pages = {347--356},
publisher = {{ACM}},
year = {2004},
url = {https://doi.org/10.1145/974614.974660},
doi = {10.1145/974614.974660},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HallettLT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/HastadIL03,
author = {Johan H{\aa}stad and
Lars Ivansson and
Jens Lagergren},
title = {Fitting points on the real line and its application to {RH} mapping},
journal = {J. Algorithms},
volume = {49},
number = {1},
pages = {42--62},
year = {2003},
url = {https://doi.org/10.1016/S0196-6774(03)00083-X},
doi = {10.1016/S0196-6774(03)00083-X},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jal/HastadIL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/Fernandez-BacaL03,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
title = {A Polynomial-Time Algorithm for Near-Perfect Phylogeny},
journal = {{SIAM} J. Comput.},
volume = {32},
number = {5},
pages = {1115--1127},
year = {2003},
url = {https://doi.org/10.1137/S0097539799350839},
doi = {10.1137/S0097539799350839},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamcomp/Fernandez-BacaL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/ArvestadBLS03,
author = {Lars Arvestad and
Ann{-}Charlotte Berglund and
Jens Lagergren and
Bengt Sennblad},
title = {Bayesian gene/species tree reconciliation and orthology analysis using
{MCMC}},
booktitle = {Proceedings of the Eleventh International Conference on Intelligent
Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane, Australia},
pages = {7--15},
year = {2003},
url = {http://bioinformatics.oupjournals.org/cgi/content/abstract/19/suppl\_1/i7?etoc},
timestamp = {Tue, 15 Jul 2003 14:30:05 +0200},
biburl = {https://dblp.org/rec/conf/ismb/ArvestadBLS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/JohanssonAWL03,
author = {{\"{O}}jvind Johansson and
Wynand Alkema and
Wyeth W. Wasserman and
Jens Lagergren},
title = {Identification of functional clusters of transcription factor binding
motifs in genome sequences: the {MSCAN} algorithm},
booktitle = {Proceedings of the Eleventh International Conference on Intelligent
Systems for Molecular Biology, June 29 - July 3, 2003, Brisbane, Australia},
pages = {169--176},
year = {2003},
url = {http://bioinformatics.oupjournals.org/cgi/content/abstract/19/suppl\_1/i169?etoc},
timestamp = {Tue, 21 Sep 2004 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ismb/JohanssonAWL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/Addario-BerryHL03,
author = {Louigi Addario{-}Berry and
Michael T. Hallett and
Jens Lagergren},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein},
title = {Towards Identifying Lateral Gene Transfer Events},
booktitle = {Proceedings of the 8th Pacific Symposium on Biocomputing, {PSB} 2003,
Lihue, Hawaii, USA, January 3-7, 2003},
pages = {279--290},
year = {2003},
url = {http://psb.stanford.edu/psb-online/proceedings/psb03/addarioberry.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/Addario-BerryHL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/Addario-BerryCHLPW03,
author = {Louigi Addario{-}Berry and
Benny Chor and
Michael T. Hallett and
Jens Lagergren and
Alessandro Panconesi and
Todd Wareham},
editor = {Gary Benson and
Roderic D. M. Page},
title = {Ancestral Maximum Likelihood of Evolutionary Trees Is Hard},
booktitle = {Algorithms in Bioinformatics, Third International Workshop, {WABI}
2003, Budapest, Hungary, September 15-20, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2812},
pages = {202--215},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/978-3-540-39763-2\_16},
doi = {10.1007/978-3-540-39763-2\_16},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/Addario-BerryCHLPW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/Lagergren02,
author = {Jens Lagergren},
title = {Combining polynomial running time and fast convergence for the disk-covering
method},
journal = {J. Comput. Syst. Sci.},
volume = {65},
number = {3},
pages = {481--493},
year = {2002},
url = {https://doi.org/10.1016/S0022-0000(02)00005-3},
doi = {10.1016/S0022-0000(02)00005-3},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcss/Lagergren02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HallettL01,
author = {Michael T. Hallett and
Jens Lagergren},
editor = {Thomas Lengauer},
title = {Efficient algorithms for lateral gene transfer problems},
booktitle = {Proceedings of the Fifth Annual International Conference on Computational
Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
April 22-25, 2001},
pages = {149--156},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/369133.369188},
doi = {10.1145/369133.369188},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HallettL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fsttcs/HallettL00,
author = {Michael T. Hallett and
Jens Lagergren},
editor = {Sanjiv Kapoor and
Sanjiva Prasad},
title = {Hunting for Functionally Analogous Genes},
booktitle = {Foundations of Software Technology and Theoretical Computer Science,
20th Conference, {FST} {TCS} 2000 New Delhi, India, December 13-15,
2000, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1974},
pages = {465--476},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-44450-5\_38},
doi = {10.1007/3-540-44450-5\_38},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/fsttcs/HallettL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HallettL00,
author = {Michael T. Hallett and
Jens Lagergren},
editor = {Ron Shamir and
Satoru Miyano and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {New algorithms for the duplication-loss model},
booktitle = {Proceedings of the Fourth Annual International Conference on Computational
Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
pages = {138--146},
publisher = {{ACM}},
year = {2000},
url = {https://doi.org/10.1145/332306.332359},
doi = {10.1145/332306.332359},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HallettL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/njc/LagergrenM99,
author = {Jens Lagergren and
Peter Bro Miltersen},
title = {Guest Editors' Foreword},
journal = {Nord. J. Comput.},
volume = {6},
number = {2},
pages = {135--136},
year = {1999},
timestamp = {Wed, 14 Jan 2004 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/njc/LagergrenM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Fernandez-BacaL98,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
title = {On the Approximability of the Steiner Tree Problem in Phylogeny},
journal = {Discret. Appl. Math.},
volume = {88},
number = {1-3},
pages = {129--145},
year = {1998},
url = {https://doi.org/10.1016/S0166-218X(98)00069-9},
doi = {10.1016/S0166-218X(98)00069-9},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Fernandez-BacaL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/KannLP98,
author = {Viggo Kann and
Jens Lagergren and
Alessandro Panconesi},
title = {Approximate Max \emph{k}-Cut with Subgraph Guarantee},
journal = {Inf. Process. Lett.},
volume = {65},
number = {3},
pages = {145--150},
year = {1998},
url = {https://doi.org/10.1016/S0020-0190(98)00005-2},
doi = {10.1016/S0020-0190(98)00005-2},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/KannLP98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jct/Lagergren98,
author = {Jens Lagergren},
title = {Upper Bounds on the Size of Obstructions and Intertwines},
journal = {J. Comb. Theory, Ser. {B}},
volume = {73},
number = {1},
pages = {7--40},
year = {1998},
url = {https://doi.org/10.1006/jctb.1997.1788},
doi = {10.1006/JCTB.1997.1788},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jct/Lagergren98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/HastdIL98,
author = {Johan H{\aa}stad and
Lars Ivansson and
Jens Lagergren},
editor = {Gianfranco Bilardi and
Giuseppe F. Italiano and
Andrea Pietracaprina and
Geppino Pucci},
title = {Fitting Points on the Real Line and Its Application to {RH} Mapping},
booktitle = {Algorithms - {ESA} '98, 6th Annual European Symposium, Venice, Italy,
August 24-26, 1998, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1461},
pages = {465--476},
publisher = {Springer},
year = {1998},
url = {https://doi.org/10.1007/3-540-68530-8\_39},
doi = {10.1007/3-540-68530-8\_39},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/esa/HastdIL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cjtcs/KannKLP97,
author = {Viggo Kann and
Sanjeev Khanna and
Jens Lagergren and
Alessandro Panconesi},
title = {On the Hardness of Approximating Max k-Cut and its Dual},
journal = {Chic. J. Theor. Comput. Sci.},
volume = {1997},
year = {1997},
url = {http://cjtcs.cs.uchicago.edu/articles/1997/2/contents.html},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cjtcs/KannKLP97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/KannLP96,
author = {Viggo Kann and
Jens Lagergren and
Alessandro Panconesi},
title = {Approximability of Maximum Splitting of k-Sets and Some Other Apx-Complete
Problems},
journal = {Inf. Process. Lett.},
volume = {58},
number = {3},
pages = {105--110},
year = {1996},
url = {https://doi.org/10.1016/0020-0190(96)00046-4},
doi = {10.1016/0020-0190(96)00046-4},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipl/KannLP96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/Lagergren96,
author = {Jens Lagergren},
title = {Efficient Parallel Algorithms for Graphs of Bounded Tree-Width},
journal = {J. Algorithms},
volume = {20},
number = {1},
pages = {20--44},
year = {1996},
url = {https://doi.org/10.1006/jagm.1996.0002},
doi = {10.1006/JAGM.1996.0002},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/Lagergren96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mscs/CourcelleL96,
author = {Bruno Courcelle and
Jens Lagergren},
title = {Equivalent Definitions of Recognizability for Sets of Graphs of Bounded
Tree-Width},
journal = {Math. Struct. Comput. Sci.},
volume = {6},
number = {2},
pages = {141--165},
year = {1996},
url = {https://doi.org/10.1017/S096012950000092X},
doi = {10.1017/S096012950000092X},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mscs/CourcelleL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/Fernandez-BacaL96,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
editor = {Friedhelm Meyer auf der Heide and
Burkhard Monien},
title = {A Polynomial-Time Algorithm for Near-Perfect Phylogeny},
booktitle = {Automata, Languages and Programming, 23rd International Colloquium,
ICALP96, Paderborn, Germany, 8-12 July 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1099},
pages = {670--680},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61440-0\_168},
doi = {10.1007/3-540-61440-0\_168},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/Fernandez-BacaL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/Fernandez-BacaL96,
author = {David Fern{\'{a}}ndez{-}Baca and
Jens Lagergren},
editor = {Tetsuo Asano and
Yoshihide Igarashi and
Hiroshi Nagamochi and
Satoru Miyano and
Subhash Suri},
title = {On the Approximability of the Steiner Tree Problem in Phylogeny},
booktitle = {Algorithms and Computation, 7th International Symposium, {ISAAC} '96,
Osaka, Japan, December 16-18, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1178},
pages = {65--74},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/BFb0009482},
doi = {10.1007/BFB0009482},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/isaac/Fernandez-BacaL96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/istcs/KannKLP96,
author = {Viggo Kann and
Sanjeev Khanna and
Jens Lagergren and
Alessandro Panconesi},
title = {On the Hardness of Approximating Max k-Cut and Its Dual},
booktitle = {Fourth Israel Symposium on Theory of Computing and Systems, {ISTCS}
1996, Jerusalem, Israel, June 10-12, 1996, Proceedings},
pages = {61--67},
publisher = {{IEEE} Computer Society},
year = {1996},
timestamp = {Tue, 31 May 2016 15:27:26 +0200},
biburl = {https://dblp.org/rec/conf/istcs/KannKLP96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacs/Lagergren96,
author = {Jens Lagergren},
editor = {Claude Puech and
R{\"{u}}diger Reischuk},
title = {Hypothesis Testing in Perfect Phylogeny for a Bounded Number of Characters},
booktitle = {{STACS} 96, 13th Annual Symposium on Theoretical Aspects of Computer
Science, Grenoble, France, February 22-24, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1046},
pages = {605--616},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-60922-9\_49},
doi = {10.1007/3-540-60922-9\_49},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/stacs/Lagergren96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Lagergren94,
author = {Jens Lagergren},
title = {The Nonexistence of Reduction Rules Giving an Embedding into a K-tree},
journal = {Discret. Appl. Math.},
volume = {54},
number = {2-3},
pages = {219--223},
year = {1994},
url = {https://doi.org/10.1016/0166-218X(94)90023-X},
doi = {10.1016/0166-218X(94)90023-X},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Lagergren94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/Lagergren94,
author = {Jens Lagergren},
editor = {Serge Abiteboul and
Eli Shamir},
title = {The Size of an Interwine},
booktitle = {Automata, Languages and Programming, 21st International Colloquium,
ICALP94, Jerusalem, Israel, July 11-14, 1994, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {820},
pages = {520--531},
publisher = {Springer},
year = {1994},
url = {https://doi.org/10.1007/3-540-58201-0\_95},
doi = {10.1007/3-540-58201-0\_95},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/Lagergren94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/CourcelleL93,
author = {Bruno Courcelle and
Jens Lagergren},
editor = {Hans J{\"{u}}rgen Schneider and
Hartmut Ehrig},
title = {Recognizable Sets of Graphs of Bounded Tree-Width},
booktitle = {Graph Transformations in Computer Science, International Workshop,
Dagstuhl Castle, Germany, January 1993, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {776},
pages = {138--152},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/3-540-57787-4\_9},
doi = {10.1007/3-540-57787-4\_9},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/CourcelleL93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jal/ArnborgLS91,
author = {Stefan Arnborg and
Jens Lagergren and
Detlef Seese},
title = {Easy Problems for Tree-Decomposable Graphs},
journal = {J. Algorithms},
volume = {12},
number = {2},
pages = {308--340},
year = {1991},
url = {https://doi.org/10.1016/0196-6774(91)90006-K},
doi = {10.1016/0196-6774(91)90006-K},
timestamp = {Sun, 28 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jal/ArnborgLS91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gst/Lagergren91,
author = {Jens Lagergren},
editor = {Neil Robertson and
Paul D. Seymour},
title = {An upper bound on the size of an obstruction},
booktitle = {Graph Structure Theory, Proceedings of a {AMS-IMS-SIAM} Joint Summer
Research Conference on Graph Minors held June 22 to July 5, 1991,
at the University of Washington, Seattle, {USA}},
series = {Contemporary Mathematics},
volume = {147},
pages = {601--621},
publisher = {American Mathematical Society},
year = {1991},
timestamp = {Fri, 27 Aug 2021 14:49:51 +0200},
biburl = {https://dblp.org/rec/conf/gst/Lagergren91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/LagergrenA91,
author = {Jens Lagergren and
Stefan Arnborg},
editor = {Javier Leach Albert and
Burkhard Monien and
Mario Rodr{\'{\i}}guez{-}Artalejo},
title = {Finding Minimal Forbidden Minors Using a Finite Congruence},
booktitle = {Automata, Languages and Programming, 18th International Colloquium,
ICALP91, Madrid, Spain, July 8-12, 1991, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {510},
pages = {532--543},
publisher = {Springer},
year = {1991},
url = {https://doi.org/10.1007/3-540-54233-7\_161},
doi = {10.1007/3-540-54233-7\_161},
timestamp = {Fri, 17 Jul 2020 16:12:48 +0200},
biburl = {https://dblp.org/rec/conf/icalp/LagergrenA91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/focs/Lagergren90,
author = {Jens Lagergren},
title = {Efficient Parallel Algorithms for Tree-Decomposition and Related Problems},
booktitle = {31st Annual Symposium on Foundations of Computer Science, St. Louis,
Missouri, USA, October 22-24, 1990, Volume {I}},
pages = {173--182},
publisher = {{IEEE} Computer Society},
year = {1990},
url = {https://doi.org/10.1109/FSCS.1990.89536},
doi = {10.1109/FSCS.1990.89536},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/focs/Lagergren90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icalp/ArnborgLS88,
author = {Stefan Arnborg and
Jens Lagergren and
Detlef Seese},
editor = {Timo Lepist{\"{o}} and
Arto Salomaa},
title = {Problems Easy for Tree-Decomposable Graphs (Extended Abstract)},
booktitle = {Automata, Languages and Programming, 15th International Colloquium,
ICALP88, Tampere, Finland, July 11-15, 1988, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {317},
pages = {38--51},
publisher = {Springer},
year = {1988},
url = {https://doi.org/10.1007/3-540-19488-6\_105},
doi = {10.1007/3-540-19488-6\_105},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/icalp/ArnborgLS88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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