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BibTeX records: Junhyong Kim
@inproceedings{DBLP:conf/bibe/HuangK21, author = {Angela Huang and Junhyong Kim}, title = {A subspace clustering method for satisfying stoimetric constraints in scRNA -seq}, booktitle = {21st {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2021, Kragujevac, Serbia, October 25-27, 2021}, pages = {1--5}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BIBE52308.2021.9635324}, doi = {10.1109/BIBE52308.2021.9635324}, timestamp = {Fri, 17 Dec 2021 08:28:48 +0100}, biburl = {https://dblp.org/rec/conf/bibe/HuangK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/KuangK20, author = {Da Kuang and Junhyong Kim}, title = {Resistant Fit Regression Normalization for Single-cell RNA-seq Data}, booktitle = {20th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2020, Cincinnati, OH, USA, October 26-28, 2020}, pages = {236--240}, publisher = {{IEEE}}, year = {2020}, url = {https://doi.org/10.1109/BIBE50027.2020.00046}, doi = {10.1109/BIBE50027.2020.00046}, timestamp = {Fri, 08 Jan 2021 16:29:47 +0100}, biburl = {https://dblp.org/rec/conf/bibe/KuangK20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ZhuFDMKK18, author = {Qin Zhu and Stephen A. Fisher and Hannah Dueck and Sarah Middleton and Mugdha Khaladkar and Junhyong Kim}, title = {{PIVOT:} platform for interactive analysis and visualization of transcriptomics data}, journal = {{BMC} Bioinform.}, volume = {19}, number = {1}, pages = {6:1--6:8}, year = {2018}, url = {https://doi.org/10.1186/s12859-017-1994-0}, doi = {10.1186/S12859-017-1994-0}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ZhuFDMKK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipaw/AlawiniCDFK18, author = {Abdussalam Alawini and Leshang Chen and Susan B. Davidson and Stephen Fisher and Junhyong Kim}, editor = {Khalid Belhajjame and Ashish Gehani and Pinar Alper}, title = {Discovering Similar Workflows via Provenance Clustering: {A} Case Study}, booktitle = {Provenance and Annotation of Data and Processes - 7th International Provenance and Annotation Workshop, {IPAW} 2018, London, UK, July 9-10, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11017}, pages = {115--127}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-98379-0\_9}, doi = {10.1007/978-3-319-98379-0\_9}, timestamp = {Tue, 14 May 2019 10:00:47 +0200}, biburl = {https://dblp.org/rec/conf/ipaw/AlawiniCDFK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/MirarabNGWKW15, author = {Siavash Mirarab and Nam Nguyen and Sheng Guo and Li{-}San Wang and Junhyong Kim and Tandy J. Warnow}, title = {{PASTA:} Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences}, journal = {J. Comput. Biol.}, volume = {22}, number = {5}, pages = {377--386}, year = {2015}, url = {https://doi.org/10.1089/cmb.2014.0156}, doi = {10.1089/CMB.2014.0156}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/MirarabNGWKW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/LeeK08, author = {Miler T. Lee and Junhyong Kim}, title = {Self Containment, a Property of Modular {RNA} Structures, Distinguishes microRNAs}, journal = {PLoS Comput. Biol.}, volume = {4}, number = {8}, year = {2008}, url = {https://doi.org/10.1371/journal.pcbi.1000150}, doi = {10.1371/JOURNAL.PCBI.1000150}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/LeeK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AngelovHKKK07, author = {Stanislav Angelov and Boulos Harb and Sampath Kannan and Sanjeev Khanna and Junhyong Kim}, title = {Efficient Enumeration of Phylogenetically Informative Substrings}, journal = {J. Comput. Biol.}, volume = {14}, number = {6}, pages = {701--723}, year = {2007}, url = {https://doi.org/10.1089/cmb.2007.R011}, doi = {10.1089/CMB.2007.R011}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/AngelovHKKK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dils/Kim07, author = {Junhyong Kim}, editor = {Sarah Cohen Boulakia and Val Tannen}, title = {Phyl-O'Data {(POD)} from Tree of Life: Integration Challenges from Yellow Slimy Things to Black Crunchy Stuff}, booktitle = {Data Integration in the Life Sciences, 4th International Workshop, {DILS} 2007, Philadelphia, PA, USA, June 27-29, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4544}, pages = {3--5}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-73255-6\_2}, doi = {10.1007/978-3-540-73255-6\_2}, timestamp = {Mon, 16 Sep 2019 15:28:31 +0200}, biburl = {https://dblp.org/rec/conf/dils/Kim07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/embc/WangWKSK06, author = {Li{-}San Wang and Doris Wagner and Chang Seob Kwon and Yanhui Su and Junhyong Kim}, title = {Transcriptional Target Prediction Using Qualitative Reasoning}, booktitle = {28th International Conference of the {IEEE} Engineering in Medicine and Biology Society, {EMBC} 2006, New York City, NY, USA, August 30 - September 3, 2006, Main Volume}, pages = {3138--3141}, publisher = {{IEEE}}, year = {2006}, url = {https://doi.org/10.1109/IEMBS.2006.259290}, doi = {10.1109/IEMBS.2006.259290}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/embc/WangWKSK06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/recomb/AngelovHKKK06, author = {Stanislav Angelov and Boulos Harb and Sampath Kannan and Sanjeev Khanna and Junhyong Kim}, editor = {Alberto Apostolico and Concettina Guerra and Sorin Istrail and Pavel A. Pevzner and Michael S. Waterman}, title = {Efficient Enumeration of Phylogenetically Informative Substrings}, booktitle = {Research in Computational Molecular Biology, 10th Annual International Conference, {RECOMB} 2006, Venice, Italy, April 2-5, 2006, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3909}, pages = {248--264}, publisher = {Springer}, year = {2006}, url = {https://doi.org/10.1007/11732990\_22}, doi = {10.1007/11732990\_22}, timestamp = {Mon, 13 May 2019 09:30:09 +0200}, biburl = {https://dblp.org/rec/conf/recomb/AngelovHKKK06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vldb/ZhengFCGKD06, author = {Yifeng Zheng and Stephen Fisher and Shirley Cohen and Sheng Guo and Junhyong Kim and Susan B. Davidson}, editor = {Umeshwar Dayal and Kyu{-}Young Whang and David B. Lomet and Gustavo Alonso and Guy M. Lohman and Martin L. Kersten and Sang Kyun Cha and Young{-}Kuk Kim}, title = {Crimson: {A} Data Management System to Support Evaluating Phylogenetic Tree Reconstruction Algorithms}, booktitle = {Proceedings of the 32nd International Conference on Very Large Data Bases, Seoul, Korea, September 12-15, 2006}, pages = {1231--1234}, publisher = {{ACM}}, year = {2006}, url = {http://dl.acm.org/citation.cfm?id=1164251}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/vldb/ZhengFCGKD06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcbb/KimJ05, author = {Junhyong Kim and Inge Jonassen}, title = {Guest Editorial: {WABI} Special Section Part {II}}, journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.}, volume = {2}, number = {1}, pages = {1--2}, year = {2005}, url = {https://doi.org/10.1109/TCBB.2005.11}, doi = {10.1109/TCBB.2005.11}, timestamp = {Mon, 03 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcbb/KimJ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ssdbm/DavidsonKZ05, author = {Susan B. Davidson and Junhyong Kim and Yifeng Zheng}, editor = {James Frew}, title = {Efficiently Supporting Structure Queries on Phylogenetic Trees}, booktitle = {17th International Conference on Scientific and Statistical Database Management, {SSDBM} 2005, 27-29 June 2005, University of California, Santa Barbara, CA, USA, Proceedings}, pages = {93--102}, year = {2005}, timestamp = {Tue, 18 Sep 2012 21:15:21 +0200}, biburl = {https://dblp.org/rec/conf/ssdbm/DavidsonKZ05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcbb/KimJ04, author = {Junhyong Kim and Inge Jonassen}, title = {Guest Editorial: {WABI} Special Section Part 1}, journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.}, volume = {1}, number = {4}, pages = {137--138}, year = {2004}, url = {https://doi.org/10.1109/TCBB.2004.42}, doi = {10.1109/TCBB.2004.42}, timestamp = {Mon, 03 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcbb/KimJ04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/AngelovHKKKW04, author = {Stanislav Angelov and Boulos Harb and Sampath Kannan and Sanjeev Khanna and Junhyong Kim and Li{-}San Wang}, editor = {Inge Jonassen and Junhyong Kim}, title = {Genome Identification and Classification by Short Oligo Arrays}, booktitle = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004, Bergen, Norway, September 17-21, 2004, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3240}, pages = {400--411}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/978-3-540-30219-3\_34}, doi = {10.1007/978-3-540-30219-3\_34}, timestamp = {Tue, 14 May 2019 10:00:40 +0200}, biburl = {https://dblp.org/rec/conf/wabi/AngelovHKKKW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/wabi/2004, editor = {Inge Jonassen and Junhyong Kim}, title = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004, Bergen, Norway, September 17-21, 2004, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3240}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/b100405}, doi = {10.1007/B100405}, isbn = {3-540-23018-1}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/2004.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MagweneLK03, author = {Paul M. Magwene and Paul Lizardi and Junhyong Kim}, title = {Reconstructing the Temporal Ordering of Biological Samples Using Microarray Data}, journal = {Bioinform.}, volume = {19}, number = {7}, pages = {842--850}, year = {2003}, url = {https://doi.org/10.1093/bioinformatics/btg081}, doi = {10.1093/BIOINFORMATICS/BTG081}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MagweneLK03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RifkinK02, author = {S. A. Rifkin and Junhyong Kim}, title = {Geometry of gene expression dynamics}, journal = {Bioinform.}, volume = {18}, number = {9}, pages = {1176--1183}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.9.1176}, doi = {10.1093/BIOINFORMATICS/18.9.1176}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/RifkinK02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/computer/Kim02, author = {Junhyong Kim}, title = {Computers Are from Mars, Organisms Are from Venus}, journal = {Computer}, volume = {35}, number = {7}, pages = {25--32}, year = {2002}, url = {https://doi.org/10.1109/MC.2002.1016898}, doi = {10.1109/MC.2002.1016898}, timestamp = {Wed, 12 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/computer/Kim02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/AspnesHKKS02, author = {James Aspnes and Julia Hartling and Ming{-}Yang Kao and Junhyong Kim and Gauri Shah}, title = {A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model}, journal = {J. Comput. Biol.}, volume = {9}, number = {5}, pages = {721--741}, year = {2002}, url = {https://doi.org/10.1089/106652702761034154}, doi = {10.1089/106652702761034154}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/AspnesHKKS02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isaac/AspnesHKKS01, author = {James Aspnes and Julia Hartling and Ming{-}Yang Kao and Junhyong Kim and Gauri Shah}, editor = {Peter Eades and Tadao Takaoka}, title = {A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model}, booktitle = {Algorithms and Computation, 12th International Symposium, {ISAAC} 2001, Christchurch, New Zealand, December 19-21, 2001, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {2223}, pages = {403--415}, publisher = {Springer}, year = {2001}, url = {https://doi.org/10.1007/3-540-45678-3\_35}, doi = {10.1007/3-540-45678-3\_35}, timestamp = {Tue, 14 May 2019 10:00:50 +0200}, biburl = {https://dblp.org/rec/conf/isaac/AspnesHKKS01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/psb/KimS01, author = {Junhyong Kim and Benjamin A. Salisbury}, editor = {Russ B. Altman and A. Keith Dunker and Lawrence Hunter and Teri E. Klein}, title = {A Tree Obscured By Vines: Horizontal Gene Transfer and the Median Tree Method of Estimating Species Phylogeny}, booktitle = {Proceedings of the 6th Pacific Symposium on Biocomputing, {PSB} 2001, Hawaii, USA, January 3-7, 2001}, pages = {571--582}, year = {2001}, url = {http://psb.stanford.edu/psb-online/proceedings/psb01/jkim.pdf}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/psb/KimS01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/cs-CE-0101015, author = {James Aspnes and Julia Hartling and Ming{-}Yang Kao and Junhyong Kim and Gauri Shah}, title = {Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model}, journal = {CoRR}, volume = {cs.CE/0101015}, year = {2001}, url = {https://arxiv.org/abs/cs/0101015}, timestamp = {Fri, 10 Jan 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/cs-CE-0101015.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KimMWCC00, author = {Junhyong Kim and Etsuko N. Moriyama and Coral G. Warr and Peter J. Clyne and John R. Carlson}, title = {Identification of novel multi-transmembrane proteins from genomic databases using quasi-periodic structural properties}, journal = {Bioinform.}, volume = {16}, number = {9}, pages = {767--775}, year = {2000}, url = {https://doi.org/10.1093/bioinformatics/16.9.767}, doi = {10.1093/BIOINFORMATICS/16.9.767}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KimMWCC00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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