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ORCIDBibTeX records: Tim Hui-Ming Huang
@article{DBLP:journals/tcbb/AdnanZHR22,
author = {Nahim Adnan and
Maryam Zand and
Tim Hui{-}Ming Huang and
Jianhua Ruan},
title = {Construction and Evaluation of Robust Interpretation Models for Breast
Cancer Metastasis Prediction},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {3},
pages = {1344--1353},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3120673},
doi = {10.1109/TCBB.2021.3120673},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/AdnanZHR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JahidHR14,
author = {Md. Jamiul Jahid and
Tim Hui{-}Ming Huang and
Jianhua Ruan},
title = {A personalized committee classification approach to improving prediction
of breast cancer metastasis},
journal = {Bioinform.},
volume = {30},
number = {13},
pages = {1858--1866},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btu128},
doi = {10.1093/BIOINFORMATICS/BTU128},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JahidHR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaoMHCH14,
author = {Zijing Mao and
Chifeng Ma and
Tim Hui{-}Ming Huang and
Yidong Chen and
Yufei Huang},
title = {{BIMMER:} a novel algorithm for detecting differential {DNA} methylation
regions from MBDCap-seq data},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-12}},
pages = {S6},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S12-S6},
doi = {10.1186/1471-2105-15-S12-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaoMHCH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/MaoHCH13,
author = {Zijing Mao and
Tim Hui{-}Ming Huang and
Yidong Chen and
Yufei Huang},
editor = {Guo{-}Zheng Li and
Sunghoon Kim and
Michael Hughes and
Geoffrey J. McLachlan and
Hongye Sun and
Xiaohua Hu and
Habtom W. Ressom and
Baoyan Liu and
Michael N. Liebman},
title = {{BIMMER:} {A} Bi-layer hidden Markov model for differential methylation
analysis},
booktitle = {2013 {IEEE} International Conference on Bioinformatics and Biomedicine,
Shanghai, China, December 18-21, 2013},
pages = {99--102},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/BIBM.2013.6732470},
doi = {10.1109/BIBM.2013.6732470},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/MaoHCH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanTPHMH12,
author = {Zhi Han and
Lu Tian and
Thierry P{\'{e}}cot and
Tim Hui{-}Ming Huang and
Raghu Machiraju and
Kun Huang},
title = {A signal processing approach for enriched region detection in {RNA}
polymerase {II} ChIP-seq data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S2},
doi = {10.1186/1471-2105-13-S2-S2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HanTPHMH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ZhangMXHHNLL12,
author = {Pengyue Zhang and
Rapha{\"{e}}l Mourad and
Yang Xiang and
Kun Huang and
Tim Hui{-}Ming Huang and
Kenneth P. Nephew and
Yunlong Liu and
Lang Li},
title = {A dynamic time order network for time-series gene expression data
analysis},
journal = {{BMC} Syst. Biol.},
volume = {6},
number = {{S-3}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1752-0509-6-S3-S9},
doi = {10.1186/1752-0509-6-S3-S9},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ZhangMXHHNLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RuanJGLHHMCKH12,
author = {Jianhua Ruan and
Md. Jamiul Jahid and
Fei Gu and
Chengwei Lei and
Yi{-}Wen Huang and
Ya{-}Ting Hsu and
David G. Mutch and
Chun{-}Liang Chen and
Nameer B. Kirma and
Tim Hui{-}Ming Huang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Network-based classification of recurrent endometrial cancers using
high-throughput {DNA} methylation data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {418--425},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382990},
doi = {10.1145/2382936.2382990},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RuanJGLHHMCKH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/SunHYHL11,
author = {Shuying Sun and
Yi{-}Wen Huang and
Pearlly Yan and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Preprocessing differential methylation hybridization microarray data},
journal = {BioData Min.},
volume = {4},
pages = {13},
year = {2011},
url = {https://doi.org/10.1186/1756-0381-4-13},
doi = {10.1186/1756-0381-4-13},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodatamining/SunHYHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TaslimHL11,
author = {Cenny Taslim and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {{DIME:} R-package for identifying differential ChIP-seq based on an
ensemble of mixture models},
journal = {Bioinform.},
volume = {27},
number = {11},
pages = {1569--1570},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr165},
doi = {10.1093/BIOINFORMATICS/BTR165},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TaslimHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunCYHHL11,
author = {Shuying Sun and
Zhengyi Chen and
Pearlly Yan and
Yi{-}Wen Huang and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Identifying hypermethylated CpG islands using a quantile regression
model},
journal = {{BMC} Bioinform.},
volume = {12},
pages = {54},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-54},
doi = {10.1186/1471-2105-12-54},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunCYHHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ShenHLWZWTWFSYNHL11,
author = {Changyu Shen and
Yi{-}Wen Huang and
Yunlong Liu and
Guohua Wang and
Yuming Zhao and
Zhiping Wang and
Mingxiang Teng and
Yadong Wang and
David A. Flockhart and
Todd C. Skaar and
Pearlly Yan and
Kenneth P. Nephew and
Tim Hui{-}Ming Huang and
Lang Li},
title = {A modulated empirical Bayes model for identifying topological and
temporal estrogen receptor {\(\alpha\)} regulatory networks in breast
cancer},
journal = {{BMC} Syst. Biol.},
volume = {5},
pages = {67},
year = {2011},
url = {https://doi.org/10.1186/1752-0509-5-67},
doi = {10.1186/1752-0509-5-67},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ShenHLWZWTWFSYNHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/OzerHWPHH11,
author = {Hatice Gulcin Ozer and
Yi{-}Wen Huang and
Jiejun Wu and
Jeffrey D. Parvin and
Tim Hui{-}Ming Huang and
Kun Huang},
title = {Comparing Multiple Chip-Sequencing Experiments},
journal = {J. Bioinform. Comput. Biol.},
volume = {9},
number = {2},
pages = {269--282},
year = {2011},
url = {https://doi.org/10.1142/S0219720011005483},
doi = {10.1142/S0219720011005483},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/OzerHWPHH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SunWWPGBASHD11,
author = {Hao Sun and
Jiejun Wu and
Priyankara Wikramasinghe and
Sharmistha Pal and
Ravi Gupta and
Anirban Bhattacharyya and
Francisco J. Agosto{-}Perez and
Louise C. Showe and
Tim Hui{-}Ming Huang and
Ramana V. Davuluri},
title = {Genome-wide mapping of {RNA} Pol-II promoter usage in mouse tissues
by ChIP-seq},
journal = {Nucleic Acids Res.},
volume = {39},
number = {1},
pages = {190--201},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq775},
doi = {10.1093/NAR/GKQ775},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SunWWPGBASHD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gensips/WuWZJLHNL11,
author = {Heng{-}Yi Wu and
Yu Wang and
Pengyue Zheng and
Guanglong Jiang and
Yunlong Liu and
Tim Hui{-}Ming Huang and
Kenneth P. Nephew and
Lang Li},
title = {An ER{\(\alpha\)}/modulator regulatory network in the breast cancer
cells},
booktitle = {2011 {IEEE} International Workshop on Genomic Signal Processing and
Statistics, GENSiPS 2011, San Antonio, TX, USA, December 4-6, 2011},
pages = {5--8},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/GENSiPS.2011.6169427},
doi = {10.1109/GENSIPS.2011.6169427},
timestamp = {Wed, 16 Oct 2019 14:14:54 +0200},
biburl = {https://dblp.org/rec/conf/gensips/WuWZJLHNL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gensips/TaslimLHH11,
author = {Cenny Taslim and
Shili Lin and
Kun Huang and
Tim Hui{-}Ming Huang},
title = {Chromatin signature analysis and prediction of genome-wide novel promoters
using finite mixture model},
booktitle = {2011 {IEEE} International Workshop on Genomic Signal Processing and
Statistics, GENSiPS 2011, San Antonio, TX, USA, December 4-6, 2011},
pages = {13--16},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/GENSiPS.2011.6169429},
doi = {10.1109/GENSIPS.2011.6169429},
timestamp = {Fri, 02 Mar 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gensips/TaslimLHH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/GuHHWMPHJ10,
author = {Fei Gu and
Hang{-}Kai Hsu and
Pei{-}Yin Hsu and
Jiejun Wu and
Yilin Ma and
Jeffrey D. Parvin and
Tim Hui{-}Ming Huang and
Victor X. Jin},
title = {Inference of hierarchical regulatory network of estrogen-dependent
breast cancer through ChIP-based data},
journal = {{BMC} Syst. Biol.},
volume = {4},
pages = {170},
year = {2010},
url = {https://doi.org/10.1186/1752-0509-4-170},
doi = {10.1186/1752-0509-4-170},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/GuHHWMPHJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KennedyGHJ10,
author = {Brian A. Kennedy and
Wenqing Gao and
Tim Hui{-}Ming Huang and
Victor X. Jin},
title = {HRTBLDb: an informative data resource for hormone receptors target
binding loci},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {676--681},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp734},
doi = {10.1093/NAR/GKP734},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KennedyGHJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icic/HanZSHZ10,
author = {Leng Han and
Siyuan Zheng and
Shuying Sun and
Tim Hui{-}Ming Huang and
Zhongming Zhao},
editor = {De{-}Shuang Huang and
Zhongming Zhao and
Vitoantonio Bevilacqua and
Juan Carlos Figueroa Garc{\'{\i}}a},
title = {Genome-Wide {DNA} Methylation Profiling in 40 Breast Cancer Cell Lines},
booktitle = {Advanced Intelligent Computing Theories and Applications, 6th International
Conference on Intelligent Computing, {ICIC} 2010, Changsha, China,
August 18-21, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6215},
pages = {277--284},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-14922-1\_35},
doi = {10.1007/978-3-642-14922-1\_35},
timestamp = {Sun, 02 Jun 2019 21:22:55 +0200},
biburl = {https://dblp.org/rec/conf/icic/HanZSHZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TaslimWYSPHLH09,
author = {Cenny Taslim and
Jiejun Wu and
Pearlly Yan and
Greg Singer and
Jeffrey D. Parvin and
Tim Hui{-}Ming Huang and
Shili Lin and
Kun Huang},
title = {Comparative study on ChIP-seq data: normalization and binding pattern
characterization},
journal = {Bioinform.},
volume = {25},
number = {18},
pages = {2334--2340},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp384},
doi = {10.1093/BIOINFORMATICS/BTP384},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TaslimWYSPHLH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunYHL09,
author = {Shuying Sun and
Pearlly Yan and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Identifying differentially methylated genes using mixed effect and
generalized least square models},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {404},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-404},
doi = {10.1186/1471-2105-10-404},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunYHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QinCLBPSCANYLNSSHD09,
author = {Huaxia Qin and
Michael W. Y. Chan and
Sandya Liyanarachchi and
Curtis Balch and
Dustin P. Potter and
Irene J. Souriraj and
Alfred S. L. Cheng and
Francisco J. Agosto{-}Perez and
Elena Nikonova and
Pearlly Yan and
Huey{-}Jen Lin and
Kenneth P. Nephew and
Joel H. Saltz and
Louise C. Showe and
Tim Hui{-}Ming Huang and
Ramana V. Davuluri},
title = {An integrative ChIP-chip and gene expression profiling to model {SMAD}
regulatory modules},
journal = {{BMC} Syst. Biol.},
volume = {3},
pages = {73},
year = {2009},
url = {https://doi.org/10.1186/1752-0509-3-73},
doi = {10.1186/1752-0509-3-73},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/QinCLBPSCANYLNSSHD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csda/KhaliliHL09,
author = {Abbas Khalili and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {A robust unified approach to analyzing methylation and gene expression
data},
journal = {Comput. Stat. Data Anal.},
volume = {53},
number = {5},
pages = {1701--1710},
year = {2009},
url = {https://doi.org/10.1016/j.csda.2008.07.010},
doi = {10.1016/J.CSDA.2008.07.010},
timestamp = {Tue, 18 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/csda/KhaliliHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/CamerlengoOYPHHTLLPK09,
author = {Terry Camerlengo and
Hatice Gulcin Ozer and
Pearlly Yan and
Jeffrey D. Parvin and
Tim Hui{-}Ming Huang and
Kun Huang and
Mingxiang Teng and
Lang Li and
Yunlong Liu and
Francisco Perez and
Tahsin M. Kur{\c{c}}},
title = {Enabling Data Analysis on High-Throughput Data in Large Data Depository
Using Web-Based Analysis Platform - {A} Case Study on Integrating
{QUEST} with GenePattern in Epigenetics Research},
booktitle = {2009 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2009, Washington, DC, USA, November 1-4, 2009, Proceedings},
pages = {392--395},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/BIBM.2009.84},
doi = {10.1109/BIBM.2009.84},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/CamerlengoOYPHHTLLPK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bicob/OzerBCWHHPHCH09,
author = {Hatice Gulcin Ozer and
Doruk Bozdag and
Terry Camerlengo and
Jiejun Wu and
Yi{-}Wen Huang and
Timothy D. R. Hartley and
Jeffrey D. Parvin and
Tim Hui{-}Ming Huang and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek and
Kun Huang},
editor = {Sanguthevar Rajasekaran},
title = {A Comprehensive Analysis Workflow for Genome-Wide Screening Data from
ChIP-Sequencing Experiments},
booktitle = {Bioinformatics and Computational Biology, First International Conference,
BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5462},
pages = {320--330},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-00727-9\_30},
doi = {10.1007/978-3-642-00727-9\_30},
timestamp = {Tue, 14 May 2019 10:00:55 +0200},
biburl = {https://dblp.org/rec/conf/bicob/OzerBCWHHPHCH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiPBKLHNK08,
author = {Meng Li and
Hyun{-}il Henry Paik and
Curtis Balch and
Yoosung Kim and
Lang Li and
Tim Hui{-}Ming Huang and
Kenneth P. Nephew and
Sun Kim},
title = {Enriched transcription factor binding sites in hypermethylated gene
promoters in drug resistant cancer cells},
journal = {Bioinform.},
volume = {24},
number = {16},
pages = {1745--1748},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn256},
doi = {10.1093/BIOINFORMATICS/BTN256},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiPBKLHNK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DaiTGZHYVBP08,
author = {Wei Dai and
Jens M. Teodoridis and
Janet Graham and
Constanze Zeller and
Tim Hui{-}Ming Huang and
Pearlly Yan and
J. Keith Vass and
Robert Brown and
Jim Paul},
title = {Methylation Linear Discriminant Analysis {(MLDA)} for identifying
differentially methylated CpG islands},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-337},
doi = {10.1186/1471-2105-9-337},
timestamp = {Tue, 30 Mar 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DaiTGZHYVBP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PotterYHL08,
author = {Dustin P. Potter and
Pearlly Yan and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Probe signal correction for differential methylation hybridization
experiments},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-453},
doi = {10.1186/1471-2105-9-453},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PotterYHL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/KimLPNSKXH08,
author = {Sun Kim and
Meng Li and
Hyun{-}il Henry Paik and
Kenneth P. Nephew and
Huidong Shi and
Robin Kramer and
Dong Xu and
Tim Hui{-}Ming Huang},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Predicting {DNA} Methylation Susceptibility Using CpG Flanking Sequences},
booktitle = {Biocomputing 2008, Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, 4-8 January 2008},
pages = {315--326},
publisher = {World Scientific},
year = {2008},
url = {http://psb.stanford.edu/psb-online/proceedings/psb08/kim.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/KimLPNSKXH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangYPEHL07,
author = {Zailong Wang and
Pearlly Yan and
Dustin P. Potter and
Charis Eng and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Heritable clustering and pathway discovery in breast cancer integrating
epigenetic and phenotypic data},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-38},
doi = {10.1186/1471-2105-8-38},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangYPEHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiCJPFLZRBDKHN06,
author = {Lang Li and
Alfred S. L. Cheng and
Victor X. Jin and
Henry H. Paik and
Meiyun Fan and
Xiaoman Li and
Wei Zhang and
Jason Robarge and
Curtis Balch and
Ramana V. Davuluri and
Sun Kim and
Tim Hui{-}Ming Huang and
Kenneth P. Nephew},
title = {A mixture model-based discriminate analysis for identifying ordered
transcription factor binding site pairs in gene promoters directly
regulated by estrogen receptor-alpha},
journal = {Bioinform.},
volume = {22},
number = {18},
pages = {2210--2216},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl329},
doi = {10.1093/BIOINFORMATICS/BTL329},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiCJPFLZRBDKHN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SunPPJHD06,
author = {Hao Sun and
Saranyan K. Palaniswamy and
Twyla T. Pohar and
Victor X. Jin and
Tim Hui{-}Ming Huang and
Ramana V. Davuluri},
title = {MPromDb: an integrated resource for annotation and visualization of
mammalian gene promoters and ChIP-chip experimental data},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {98--103},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj096},
doi = {10.1093/NAR/GKJ096},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SunPPJHD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LiSYHN05,
author = {Lang Li and
Huidong Shi and
Constantin T. Yiannoutsos and
Tim Hui{-}Ming Huang and
Kenneth P. Nephew},
title = {Epigenetic Hypothesis Tests for Methylation and Acetylation in a Triple
Microarray System},
journal = {J. Comput. Biol.},
volume = {12},
number = {3},
pages = {370--390},
year = {2005},
url = {https://doi.org/10.1089/cmb.2005.12.370},
doi = {10.1089/CMB.2005.12.370},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/LiSYHN05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MongaAYHC01,
author = {Harpreet K. Monga and
Adam L. Asare and
Pearlly Yan and
Tim Hui{-}Ming Huang and
Charles William Caldwell},
title = {Online Microarray Laboratory Information Management System {(M-LIMS):}
Linking Health Informatics and Bioinformatics},
booktitle = {{AMIA} 2001, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 3-7, 2001},
publisher = {{AMIA}},
year = {2001},
url = {https://knowledge.amia.org/amia-55142-a2001a-1.597057/t-002-1.598852/f-001-1.598853/a-335-1.599131/a-336-1.599128},
timestamp = {Wed, 17 Apr 2024 11:48:39 +0200},
biburl = {https://dblp.org/rec/conf/amia/MongaAYHC01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/KellerGSCH95,
author = {James M. Keller and
Paul D. Gader and
Ozy Sjahputera and
Charles William Caldwell and
Tim Hui{-}Ming Huang},
title = {A Fuzzy Logic Rule-Based System for Chromosome Recognition},
booktitle = {Eighth Annual {IEEE} Symposium on Computer-Based Medical Systems (CBMS'95),
June 9-10, 1995, Lubbock, Texas, {USA}},
pages = {125--132},
publisher = {{IEEE} Computer Society},
year = {1995},
url = {https://doi.org/10.1109/CBMS.1995.465438},
doi = {10.1109/CBMS.1995.465438},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/KellerGSCH95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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