BibTeX records: James M. Hogan

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@article{DBLP:journals/tcbb/KimothiBHD23,
  author       = {Dhananjay Kimothi and
                  Pravesh Biyani and
                  James M. Hogan and
                  Melissa J. Davis},
  title        = {Sequence Representations and Their Utility for Predicting Protein-Protein
                  Interactions},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {20},
  number       = {1},
  pages        = {646--657},
  year         = {2023},
  url          = {https://doi.org/10.1109/TCBB.2021.3137325},
  doi          = {10.1109/TCBB.2021.3137325},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/KimothiBHD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tvcg/RittenbruchVBHJ22,
  author       = {Markus Rittenbruch and
                  Kellie Vella and
                  Margot Brereton and
                  James M. Hogan and
                  Daniel Johnson and
                  Julian Heinrich and
                  Se{\'{a}}n I. O'Donoghue},
  title        = {Collaborative Sense-Making in Genomic Research: The Role of Visualisation},
  journal      = {{IEEE} Trans. Vis. Comput. Graph.},
  volume       = {28},
  number       = {12},
  pages        = {4477--4489},
  year         = {2022},
  url          = {https://doi.org/10.1109/TVCG.2021.3090746},
  doi          = {10.1109/TVCG.2021.3090746},
  timestamp    = {Tue, 06 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tvcg/RittenbruchVBHJ22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithms/PilzPKHHR20,
  author       = {Sarah Pilz and
                  Florian Porrmann and
                  Martin Kaiser and
                  Jens Hagemeyer and
                  James M. Hogan and
                  Ulrich R{\"{u}}ckert},
  title        = {Accelerating Binary String Comparisons with a Scalable, Streaming-Based
                  System Architecture Based on FPGAs},
  journal      = {Algorithms},
  volume       = {13},
  number       = {2},
  pages        = {47},
  year         = {2020},
  url          = {https://doi.org/10.3390/a13020047},
  doi          = {10.3390/A13020047},
  timestamp    = {Sat, 02 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithms/PilzPKHHR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BernardCCCCHMR19,
  author       = {Guillaume Bernard and
                  Cheong Xin Chan and
                  Yao{-}ban Chan and
                  Xin{-}Yi Chua and
                  Yingnan Cong and
                  James M. Hogan and
                  Stefan R. Maetschke and
                  Mark A. Ragan},
  title        = {Alignment-free inference of hierarchical and reticulate phylogenomic
                  relationships},
  journal      = {Briefings Bioinform.},
  volume       = {20},
  number       = {2},
  pages        = {426--435},
  year         = {2019},
  url          = {https://doi.org/10.1093/bib/bbx067},
  doi          = {10.1093/BIB/BBX067},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/BernardCCCCHMR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChappellGHHRRKP18,
  author       = {Timothy Chappell and
                  Shlomo Geva and
                  James M. Hogan and
                  Flavia Huygens and
                  Irani U. Rathnayake and
                  Stephen Rudd and
                  Wayne Kelly and
                  Dimitri Perrin},
  title        = {Rapid analysis of metagenomic data using signature-based clustering},
  journal      = {{BMC} Bioinform.},
  volume       = {19-S},
  number       = {20},
  pages        = {79--93},
  year         = {2018},
  url          = {https://doi.org/10.1186/s12859-018-2540-4},
  doi          = {10.1186/S12859-018-2540-4},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ChappellGHHRRKP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adcs/ChappellGHP18,
  author       = {Timothy Chappell and
                  Shlomo Geva and
                  James M. Hogan and
                  Dimitri Perrin},
  title        = {Rapid hierarchical clustering of biological sequences},
  booktitle    = {Proceedings of the 23rd Australasian Document Computing Symposium,
                  {ADCS} 2018, Dunedin, New Zealand, December 11-12, 2018},
  pages        = {8:1--8:4},
  publisher    = {{ACM}},
  year         = {2018},
  url          = {https://doi.org/10.1145/3291992.3291998},
  doi          = {10.1145/3291992.3291998},
  timestamp    = {Thu, 06 Dec 2018 11:00:38 +0100},
  biburl       = {https://dblp.org/rec/conf/adcs/ChappellGHP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adcs/BuckinghamGH18,
  author       = {Lawrence Buckingham and
                  Shlomo Geva and
                  James M. Hogan},
  title        = {Protein database search using compressed k-mer vocabularies},
  booktitle    = {Proceedings of the 23rd Australasian Document Computing Symposium,
                  {ADCS} 2018, Dunedin, New Zealand, December 11-12, 2018},
  pages        = {10:1--10:7},
  publisher    = {{ACM}},
  year         = {2018},
  url          = {https://doi.org/10.1145/3291992.3291997},
  doi          = {10.1145/3291992.3291997},
  timestamp    = {Thu, 06 Dec 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/adcs/BuckinghamGH18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adcs/ChappellGH17,
  author       = {Timothy Chappell and
                  Shlomo Geva and
                  James M. Hogan},
  editor       = {Bevan Koopman and
                  Guido Zuccon and
                  Mark James Carman},
  title        = {K-Means Clustering of Biological Sequences},
  booktitle    = {Proceedings of the 22nd Australasian Document Computing Symposium,
                  {ADCS} 2017, Brisbane, QLD, Australia, December 7-8, 2017},
  pages        = {2:1--2:4},
  publisher    = {{ACM}},
  year         = {2017},
  url          = {https://doi.org/10.1145/3166072.3166076},
  doi          = {10.1145/3166072.3166076},
  timestamp    = {Wed, 14 Nov 2018 10:55:47 +0100},
  biburl       = {https://dblp.org/rec/conf/adcs/ChappellGH17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ChappellGHHKP17,
  author       = {Timothy Chappell and
                  Shlomo Geva and
                  James M. Hogan and
                  Flavia Huygens and
                  Wayne Kelly and
                  Dimitri Perrin},
  editor       = {Xiaohua Hu and
                  Chi{-}Ren Shyu and
                  Yana Bromberg and
                  Jean Gao and
                  Yang Gong and
                  Dmitry Korkin and
                  Illhoi Yoo and
                  Huiru Jane Zheng},
  title        = {Signature-based clustering for analysis of the wound microbiome},
  booktitle    = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
  pages        = {339--346},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/BIBM.2017.8217673},
  doi          = {10.1109/BIBM.2017.8217673},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/ChappellGHHKP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/BuckinghamCHG17,
  author       = {Lawrence Buckingham and
                  Timothy Chappell and
                  James M. Hogan and
                  Shlomo Geva},
  title        = {Similarity Projection: {A} Geometric Measure for Comparison of Biological
                  Sequences},
  booktitle    = {13th {IEEE} International Conference on e-Science, e-Science 2017,
                  Auckland, New Zealand, October 24-27, 2017},
  pages        = {325--334},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/eScience.2017.46},
  doi          = {10.1109/ESCIENCE.2017.46},
  timestamp    = {Wed, 16 Oct 2019 14:14:48 +0200},
  biburl       = {https://dblp.org/rec/conf/eScience/BuckinghamCHG17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/SmithHCB0R17,
  author       = {Samuel Thomas Smith and
                  James Michael Hogan and
                  Xin{-}Yi Chua and
                  Margot Brereton and
                  Daniel M. Johnson and
                  Markus Rittenbruch},
  title        = {Iterative Design and Evaluation of Regulatory Network Visualisation
                  at Scale},
  booktitle    = {13th {IEEE} International Conference on e-Science, e-Science 2017,
                  Auckland, New Zealand, October 24-27, 2017},
  pages        = {354--363},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/eScience.2017.49},
  doi          = {10.1109/ESCIENCE.2017.49},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eScience/SmithHCB0R17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spawc/KimothiSBAH17,
  author       = {Dhananjay Kimothi and
                  Ankita Shukla and
                  Pravesh Biyani and
                  Saket Anand and
                  James M. Hogan},
  title        = {Metric learning on biological sequence embeddings},
  booktitle    = {18th {IEEE} International Workshop on Signal Processing Advances in
                  Wireless Communications, {SPAWC} 2017, Sapporo, Japan, July 3-6, 2017},
  pages        = {1--5},
  publisher    = {{IEEE}},
  year         = {2017},
  url          = {https://doi.org/10.1109/SPAWC.2017.8227769},
  doi          = {10.1109/SPAWC.2017.8227769},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/spawc/KimothiSBAH17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cgf/HeinrichVHWRHBO16,
  author       = {Julian Heinrich and
                  Jenny Vuong and
                  Christopher J. Hammang and
                  A. Wu and
                  Markus Rittenbruch and
                  James M. Hogan and
                  Margot Brereton and
                  Se{\'{a}}n I. O'Donoghue},
  title        = {Evaluating Viewpoint Entropy for Ribbon Representation of Protein
                  Structure},
  journal      = {Comput. Graph. Forum},
  volume       = {35},
  number       = {3},
  pages        = {181--190},
  year         = {2016},
  url          = {https://doi.org/10.1111/cgf.12894},
  doi          = {10.1111/CGF.12894},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cgf/HeinrichVHWRHBO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/chiplay/Hutson0CHBRBO16,
  author       = {Holly Hutson and
                  Daniel M. Johnson and
                  Xin{-}Yi Chua and
                  James M. Hogan and
                  Margot Brereton and
                  Markus Rittenbruch and
                  Benedetta Frida Baldi and
                  Se{\'{a}}n I. O'Donoghue},
  editor       = {Anna L. Cox and
                  Phoebe O. Toups Dugas and
                  Regan L. Mandryk and
                  Paul A. Cairns and
                  Vero Vanden Abeele and
                  Daniel M. Johnson},
  title        = {Can Videogame Players Inform Better Scientific Visualization'},
  booktitle    = {Proceedings of the 2016 Annual Symposium on Computer-Human Interaction
                  in Play, Companion Extended Abstracts, {CHI} {PLAY} 2016, Austin,
                  TX, USA, October 16 - 19, 2016},
  pages        = {181--187},
  publisher    = {{ACM}},
  year         = {2016},
  url          = {http://dl.acm.org/citation.cfm?id=2987736},
  timestamp    = {Tue, 06 Sep 2022 13:45:09 +0200},
  biburl       = {https://dblp.org/rec/conf/chiplay/Hutson0CHBRBO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ozchi/Fitz-WalterOBH016,
  author       = {Zachary Fitz{-}Walter and
                  Se{\'{a}}n I. O'Donoghue and
                  Benedetta Frida Baldi and
                  James M. Hogan and
                  Daniel M. Johnson and
                  Margot Brereton},
  editor       = {Henry B. L. Duh and
                  Christopher Lueg and
                  Mark Billinghurst and
                  Weidong Huang},
  title        = {Using videogames to improve molecular graphics tools},
  booktitle    = {Proceedings of the 28th Australian Conference on Computer-Human Interaction,
                  OzCHI 2016, Launceston, Tasmania, Australia, November 29 - December
                  2, 2016},
  pages        = {646--648},
  publisher    = {{ACM}},
  year         = {2016},
  url          = {https://doi.org/10.1145/3010915.3011851},
  doi          = {10.1145/3010915.3011851},
  timestamp    = {Tue, 06 Nov 2018 16:57:11 +0100},
  biburl       = {https://dblp.org/rec/conf/ozchi/Fitz-WalterOBH016.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/KimothiSBH16,
  author       = {Dhananjay Kimothi and
                  Akshay Soni and
                  Pravesh Biyani and
                  James M. Hogan},
  title        = {Distributed Representations for Biological Sequence Analysis},
  journal      = {CoRR},
  volume       = {abs/1608.05949},
  year         = {2016},
  url          = {http://arxiv.org/abs/1608.05949},
  eprinttype    = {arXiv},
  eprint       = {1608.05949},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/KimothiSBH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/ChuaBHN15,
  author       = {Xin{-}Yi Chua and
                  Lawrence Buckingham and
                  James M. Hogan and
                  Pavel S. Novichkov},
  editor       = {Slawomir Koziel and
                  Leifur {\TH}. Leifsson and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Large Scale Comparative Visualisation of Regulatory Networks with
                  TRNDiff},
  booktitle    = {Proceedings of the International Conference on Computational Science,
                  {ICCS} 2015, Computational Science at the Gates of Nature, Reykjav{\'{\i}}k,
                  Iceland, 1-3 June, 2015, 2014},
  series       = {Procedia Computer Science},
  volume       = {51},
  pages        = {713--724},
  publisher    = {Elsevier},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.procs.2015.05.189},
  doi          = {10.1016/J.PROCS.2015.05.189},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/ChuaBHN15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iticse/BrianTHF15,
  author       = {Samuel A. Brian and
                  Richard N. Thomas and
                  James M. Hogan and
                  Colin J. Fidge},
  editor       = {Valentina Dagiene and
                  Carsten Schulte and
                  Tatjana Jevsikova},
  title        = {Planting Bugs: {A} System for Testing Students' Unit Tests},
  booktitle    = {Proceedings of the 2015 {ACM} Conference on Innovation and Technology
                  in Computer Science Education, ITiCS 2015, Vilnius, Lithuania, July
                  4-8, 2015},
  pages        = {45--50},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2729094.2742631},
  doi          = {10.1145/2729094.2742631},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iticse/BrianTHF15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ozchi/SmithHRJB15,
  author       = {Samuel Thomas Smith and
                  James M. Hogan and
                  Markus Rittenbruch and
                  Daniel M. Johnson and
                  Margot Brereton},
  editor       = {Bernd Ploderer and
                  Marcus Carter and
                  Martin R. Gibbs and
                  Wally Smith and
                  Frank Vetere},
  title        = {Visual Analytics for Large-Scale Bioinformatic Data Sets},
  booktitle    = {Proceedings of the Annual Meeting of the Australian Special Interest
                  Group for Computer Human Interaction, {OZCHI} 2015, Parkville, VIC,
                  Australia, December 7-10, 2015},
  pages        = {603--607},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2838739.2838829},
  doi          = {10.1145/2838739.2838829},
  timestamp    = {Sat, 19 Oct 2019 20:25:22 +0200},
  biburl       = {https://dblp.org/rec/conf/ozchi/SmithHRJB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ausdm/BuckinghamHGK14,
  author       = {Lawrence Buckingham and
                  James M. Hogan and
                  Shlomo Geva and
                  Wayne Kelly},
  editor       = {Xue Li and
                  Lin Liu and
                  Kok{-}Leong Ong and
                  Yanchang Zhao},
  title        = {Locality-Sensitive Hashing for Protein Classification},
  booktitle    = {Twelfth Australasian Data Mining Conference, AusDM 2014, Brisbane,
                  Australia, November 2014},
  series       = {{CRPIT}},
  volume       = {158},
  pages        = {141--147},
  publisher    = {Australian Computer Society},
  year         = {2014},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV158Buckingham.html},
  timestamp    = {Thu, 25 Jul 2019 14:09:43 +0200},
  biburl       = {https://dblp.org/rec/conf/ausdm/BuckinghamHGK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BuckinghamH14,
  author       = {Lawrence Buckingham and
                  James M. Hogan},
  editor       = {David Abramson and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Computational Science for Undergraduate Biologists via QUT.Bio.Excel},
  booktitle    = {Proceedings of the International Conference on Computational Science,
                  {ICCS} 2014, Cairns, Queensland, Australia, 10-12 June, 2014},
  series       = {Procedia Computer Science},
  volume       = {29},
  pages        = {1403--1412},
  publisher    = {Elsevier},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.procs.2014.05.127},
  doi          = {10.1016/J.PROCS.2014.05.127},
  timestamp    = {Tue, 20 Jun 2023 16:27:45 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/BuckinghamH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/HoganP14,
  author       = {James M. Hogan and
                  Timothy Peut},
  editor       = {David Abramson and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Large Scale Read Classification forNext Generation Sequencing},
  booktitle    = {Proceedings of the International Conference on Computational Science,
                  {ICCS} 2014, Cairns, Queensland, Australia, 10-12 June, 2014},
  series       = {Procedia Computer Science},
  volume       = {29},
  pages        = {2003--2012},
  publisher    = {Elsevier},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.procs.2014.05.184},
  doi          = {10.1016/J.PROCS.2014.05.184},
  timestamp    = {Sun, 21 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/HoganP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aswec/CahillHT13,
  author       = {Jaspar Cahill and
                  James M. Hogan and
                  Richard N. Thomas},
  title        = {Predicting Fault-Prone Software Modules with Rank Sum Classification},
  booktitle    = {22nd Australian Conference on Software Engineering {(ASWEC} 2013),
                  4-7 June 2013, Melbourne, Victoria, Australia},
  pages        = {211--219},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/ASWEC.2013.33},
  doi          = {10.1109/ASWEC.2013.33},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aswec/CahillHT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/HoganKN13,
  author       = {James M. Hogan and
                  Wayne Kelly and
                  Felicity Newell},
  title        = {Consensus Sigma-70 Promoter Prediction Using Hadoop},
  booktitle    = {9th {IEEE} International Conference on eScience, eScience 2013, Beijing,
                  China, October 22-25, 2013},
  pages        = {35--44},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/eScience.2013.42},
  doi          = {10.1109/ESCIENCE.2013.42},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/eScience/HoganKN13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:series/sci/2011-303,
  author       = {Joachim Diederich and
                  Cengiz G{\"{u}}nay and
                  James M. Hogan},
  title        = {Recruitment Learning},
  series       = {Studies in Computational Intelligence},
  volume       = {303},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-14028-0},
  doi          = {10.1007/978-3-642-14028-0},
  isbn         = {978-3-642-14027-3},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/series/sci/2011-303.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/HoganSRN11,
  author       = {James M. Hogan and
                  Jiro Sumitomo and
                  Paul Roe and
                  Felicity Newell},
  title        = {Biomashups: the new world of exploratory bioinformatics?},
  journal      = {Concurr. Comput. Pract. Exp.},
  volume       = {23},
  number       = {11},
  pages        = {1169--1178},
  year         = {2011},
  url          = {https://doi.org/10.1002/cpe.1598},
  doi          = {10.1002/CPE.1598},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/concurrency/HoganSRN11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/TowseyTHM08,
  author       = {Michael W. Towsey and
                  Peter Timms and
                  James M. Hogan and
                  Sarah A. Mathews},
  title        = {The cross-species prediction of bacterial promoters using a support
                  vector machine},
  journal      = {Comput. Biol. Chem.},
  volume       = {32},
  number       = {5},
  pages        = {359--366},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.compbiolchem.2008.07.009},
  doi          = {10.1016/J.COMPBIOLCHEM.2008.07.009},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/candc/TowseyTHM08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/BuckinghamHRST08,
  author       = {Lawrence Buckingham and
                  James M. Hogan and
                  Paul Roe and
                  Jiro Sumitomo and
                  Michael W. Towsey},
  title        = {Comparative Studies Made Simple in GPFlow},
  booktitle    = {8th {IEEE} International Symposium on Cluster Computing and the Grid
                  (CCGrid 2008), 19-22 May 2008, Lyon, France},
  pages        = {699},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/CCGRID.2008.91},
  doi          = {10.1109/CCGRID.2008.91},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ccgrid/BuckinghamHRST08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/SumitomoHNR08,
  author       = {Jiro Sumitomo and
                  James M. Hogan and
                  Felicity Newell and
                  Paul Roe},
  title        = {BioMashups: The New World of Exploratory Bioinformatics?},
  booktitle    = {Fourth International Conference on e-Science, e-Science 2008, 7-12
                  December 2008, Indianapolis, IN, {USA}},
  pages        = {422--423},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/eScience.2008.92},
  doi          = {10.1109/ESCIENCE.2008.92},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eScience/SumitomoHNR08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BuckinghamHRST08,
  author       = {Lawrence Buckingham and
                  James M. Hogan and
                  Paul Roe and
                  Jiro Sumitomo and
                  Michael W. Towsey},
  editor       = {Marian Bubak and
                  G. Dick van Albada and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Comparative Studies Simplified in GPFlow},
  booktitle    = {Computational Science - {ICCS} 2008, 8th International Conference,
                  Krak{\'{o}}w, Poland, June 23-25, 2008, Proceedings, Part {III}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5103},
  pages        = {491--500},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-69389-5\_56},
  doi          = {10.1007/978-3-540-69389-5\_56},
  timestamp    = {Tue, 14 May 2019 10:00:48 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/BuckinghamHRST08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GordonTHMT06,
  author       = {James J. Gordon and
                  Michael W. Towsey and
                  James M. Hogan and
                  Sarah A. Mathews and
                  Peter Timms},
  title        = {Improved prediction of bacterial transcription start sites},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {2},
  pages        = {142--148},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/bti771},
  doi          = {10.1093/BIOINFORMATICS/BTI771},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GordonTHMT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijns/TowseyGH06,
  author       = {Michael W. Towsey and
                  James J. Gordon and
                  James M. Hogan},
  title        = {The Prediction of Bacterial Transcription Start Sites Using Svms},
  journal      = {Int. J. Neural Syst.},
  volume       = {16},
  number       = {5},
  pages        = {363--370},
  year         = {2006},
  url          = {https://doi.org/10.1142/S0129065706000767},
  doi          = {10.1142/S0129065706000767},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijns/TowseyGH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ace/HoganT05,
  author       = {James M. Hogan and
                  Richard N. Thomas},
  editor       = {Alison Young and
                  Denise Tolhurst},
  title        = {Developing the Software Engineering Team},
  booktitle    = {Seventh Australasian Computing Education Conference {(ACE} 2005),
                  Newcastle, NSW, Australia, January/February 2005},
  series       = {{CRPIT}},
  volume       = {42},
  pages        = {203--210},
  publisher    = {Australian Computer Society},
  year         = {2005},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV42Hogan1.html},
  timestamp    = {Thu, 25 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ace/HoganT05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ace/HoganST05,
  author       = {James M. Hogan and
                  Glenn Smith and
                  Richard N. Thomas},
  editor       = {Alison Young and
                  Denise Tolhurst},
  title        = {Tight Spirals and Industry Clients: The Modern {SE} Education Experience},
  booktitle    = {Seventh Australasian Computing Education Conference {(ACE} 2005),
                  Newcastle, NSW, Australia, January/February 2005},
  series       = {{CRPIT}},
  volume       = {42},
  pages        = {217--222},
  publisher    = {Australian Computer Society},
  year         = {2005},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV42Hogan2.html},
  timestamp    = {Thu, 25 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ace/HoganST05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aswec/MarringtonHT05,
  author       = {Andrew Marrington and
                  James M. Hogan and
                  Richard N. Thomas},
  title        = {Quality Assurance in a Student-Based Agile Software Engineering Process},
  booktitle    = {16th Australian Software Engineering Conference {(ASWEC} 2005), 31
                  March - 1 April 2005, Brisbane, Australia},
  pages        = {324--331},
  publisher    = {{IEEE} Computer Society},
  year         = {2005},
  url          = {https://doi.org/10.1109/ASWEC.2005.38},
  doi          = {10.1109/ASWEC.2005.38},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aswec/MarringtonHT05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ideal/2005,
  editor       = {Marcus Gallagher and
                  James M. Hogan and
                  Fr{\'{e}}d{\'{e}}ric Maire},
  title        = {Intelligent Data Engineering and Automated Learning - {IDEAL} 2005,
                  6th International Conference, Brisbane, Australia, July 6-8, 2005,
                  Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3578},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/b137888},
  doi          = {10.1007/B137888},
  isbn         = {3-540-26972-X},
  timestamp    = {Tue, 14 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ideal/2005.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acsw/HoganHP04,
  author       = {James M. Hogan and
                  Chris Ho{-}Stuart and
                  Bihn Pham},
  editor       = {James M. Hogan and
                  Paul Montague and
                  Martin K. Purvis and
                  Chris Steketee},
  title        = {Key Challenges in Software Internationalisation},
  booktitle    = {{ACSW} Frontiers 2004, 2004 {ACSW} Workshops - the Australasian Information
                  Security Workshop (AISW2004), the Australasian Workshop on Data Mining
                  and Web Intelligence (DMWI2004), and the Australasian Workshop on
                  Software Internationalisation {(AWSI2004)} . Dunedin, New Zealand,
                  January 2004},
  series       = {{CRPIT}},
  volume       = {32},
  pages        = {187--194},
  publisher    = {Australian Computer Society},
  year         = {2004},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV32Hogan.html},
  timestamp    = {Thu, 25 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acsw/HoganHP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acsw/SahamaHH04,
  author       = {Tony R. Sahama and
                  Chris Ho{-}Stuart and
                  James M. Hogan},
  editor       = {James M. Hogan and
                  Paul Montague and
                  Martin K. Purvis and
                  Chris Steketee},
  title        = {Developing and Delivering a Software Internationalisation Subject},
  booktitle    = {{ACSW} Frontiers 2004, 2004 {ACSW} Workshops - the Australasian Information
                  Security Workshop (AISW2004), the Australasian Workshop on Data Mining
                  and Web Intelligence (DMWI2004), and the Australasian Workshop on
                  Software Internationalisation {(AWSI2004)} . Dunedin, New Zealand,
                  January 2004},
  series       = {{CRPIT}},
  volume       = {32},
  pages        = {199--204},
  publisher    = {Australian Computer Society},
  year         = {2004},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV32Sahama.html},
  timestamp    = {Thu, 25 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acsw/SahamaHH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/acsw/2004,
  editor       = {James M. Hogan and
                  Paul Montague and
                  Martin K. Purvis and
                  Chris Steketee},
  title        = {{ACSW} Frontiers 2004, 2004 {ACSW} Workshops - the Australasian Information
                  Security Workshop (AISW2004), the Australasian Workshop on Data Mining
                  and Web Intelligence (DMWI2004), and the Australasian Workshop on
                  Software Internationalisation {(AWSI2004)} . Dunedin, New Zealand,
                  January 2004},
  series       = {{CRPIT}},
  volume       = {32},
  publisher    = {Australian Computer Society},
  year         = {2004},
  isbn         = {1-920682-14-7},
  timestamp    = {Thu, 05 Oct 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acsw/2004.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/dnb/Hogan02,
  author       = {James M. Hogan},
  title        = {Recruitment learning in randomly connected neural networks},
  school       = {Queensland University of Technology, Brisbane, Australia},
  year         = {2002},
  url          = {https://d-nb.info/965218813},
  isbn         = {978-3-89825-514-1},
  timestamp    = {Sat, 17 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/phd/dnb/Hogan02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/Hogan02,
  author       = {James M. Hogan},
  title        = {Advanced mean field methods: theory and practice: M. Opper and D.
                  Saad (Eds.); {MIT} Press, Cambridge, MA, 2001, 300pp. {ISBN} 0-262-15054-9},
  journal      = {Neurocomputing},
  volume       = {48},
  number       = {1-4},
  pages        = {1057--1060},
  year         = {2002},
  url          = {https://doi.org/10.1016/S0925-2312(02)00612-4},
  doi          = {10.1016/S0925-2312(02)00612-4},
  timestamp    = {Sat, 20 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijon/Hogan02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apsec/HoganST02,
  author       = {James M. Hogan and
                  Glenn Smith and
                  Richard N. Thomas},
  title        = {The Real World Software Process},
  booktitle    = {9th Asia-Pacific Software Engineering Conference {(APSEC} 2002), 4-6
                  December 2002, Gold Coast, Queensland, Australia},
  pages        = {366--375},
  publisher    = {{IEEE} Computer Society},
  year         = {2002},
  url          = {https://doi.org/10.1109/APSEC.2002.1183006},
  doi          = {10.1109/APSEC.2002.1183006},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/apsec/HoganST02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apsec/CahillHT02,
  author       = {Jaspar Cahill and
                  James M. Hogan and
                  Richard N. Thomas},
  title        = {The Java Metrics Reporter- An Extensible Tool for 00 Software Analysis},
  booktitle    = {9th Asia-Pacific Software Engineering Conference {(APSEC} 2002), 4-6
                  December 2002, Gold Coast, Queensland, Australia},
  pages        = {507--516},
  publisher    = {{IEEE} Computer Society},
  year         = {2002},
  url          = {https://doi.org/10.1109/APSEC.2002.1183069},
  doi          = {10.1109/APSEC.2002.1183069},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/apsec/CahillHT02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijns/HoganD01,
  author       = {James M. Hogan and
                  Joachim Diederich},
  title        = {Recruitment Learning Of Boolean Functions In Sparse Random Networks},
  journal      = {Int. J. Neural Syst.},
  volume       = {11},
  number       = {6},
  pages        = {537--559},
  year         = {2001},
  url          = {https://doi.org/10.1142/S0129065701000953},
  doi          = {10.1142/S0129065701000953},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijns/HoganD01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/conll/HoganDF98,
  author       = {James M. Hogan and
                  Joachim Diederich and
                  Gerard D. Finn},
  editor       = {David M. W. Powers},
  title        = {Selective Attention and the Acquisition of Spatial Semantics},
  booktitle    = {Proceedings of the Joint Conference on New Methods in Language Processing
                  and Computational Natural Language Learning, NeMLaP/CoNLL 1998, Macquarie
                  University, Sydney, NSW, Australia, January 11-17, 1998},
  pages        = {235--244},
  publisher    = {{ACL}},
  year         = {1998},
  url          = {https://aclanthology.org/W98-1228/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/conll/HoganDF98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/acj/HoganJ97,
  author       = {James M. Hogan and
                  Peter C. J. James},
  title        = {Australian Approaches to Internet Content Regulation},
  journal      = {Aust. Comput. J.},
  volume       = {29},
  number       = {1},
  pages        = {16--23},
  year         = {1997},
  timestamp    = {Tue, 19 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/acj/HoganJ97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compsec/BergenH93,
  author       = {Helen A. Bergen and
                  James M. Hogan},
  title        = {A chosen plaintext attack on an adaptive arithmetic coding compression
                  algorithm},
  journal      = {Comput. Secur.},
  volume       = {12},
  number       = {2},
  pages        = {157--167},
  year         = {1993},
  url          = {https://doi.org/10.1016/0167-4048(93)90099-Q},
  doi          = {10.1016/0167-4048(93)90099-Q},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/compsec/BergenH93.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compsec/BergenH92,
  author       = {Helen A. Bergen and
                  James M. Hogan},
  title        = {Data security in a fixed-model arithmetic coding compression algorithm},
  journal      = {Comput. Secur.},
  volume       = {11},
  number       = {5},
  pages        = {445--461},
  year         = {1992},
  url          = {https://doi.org/10.1016/0167-4048(92)90011-F},
  doi          = {10.1016/0167-4048(92)90011-F},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/compsec/BergenH92.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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