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ORCIDBibTeX records: Padraig Gleeson
@article{DBLP:journals/jib/GolebiewskiBGGKKMNSWS24,
author = {Martin Golebiewski and
Gary D. Bader and
Padraig Gleeson and
Thomas E. Gorochowski and
Sarah M. Keating and
Matthias K{\"{o}}nig and
Chris J. Myers and
David P. Nickerson and
Bj{\"{o}}rn Sommer and
Dagmar Waltemath and
Falk Schreiber},
title = {Specifications of standards in systems and synthetic biology: status,
developments, and tools in 2024},
journal = {J. Integr. Bioinform.},
volume = {21},
number = {1},
year = {2024},
url = {https://doi.org/10.1515/jib-2024-0015},
doi = {10.1515/JIB-2024-0015},
timestamp = {Sun, 08 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/GolebiewskiBGGKKMNSWS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/KonigGGGHKMNSWS23,
author = {Matthias K{\"{o}}nig and
Padraig Gleeson and
Martin Golebiewski and
Thomas E. Gorochowski and
Michael Hucka and
Sarah M. Keating and
Chris J. Myers and
David P. Nickerson and
Bj{\"{o}}rn Sommer and
Dagmar Waltemath and
Falk Schreiber},
title = {Specifications of standards in systems and synthetic biology: status
and developments in 2022 and the {COMBINE} meeting 2022},
journal = {J. Integr. Bioinform.},
volume = {20},
number = {1},
year = {2023},
url = {https://doi.org/10.1515/jib-2023-0004},
doi = {10.1515/JIB-2023-0004},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/KonigGGGHKMNSWS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BirgiolasHGGDC23,
author = {Justas Birgiolas and
Vergil Haynes and
Padraig Gleeson and
Richard C. Gerkin and
Suzanne W. Dietrich and
Sharon M. Crook},
title = {NeuroML-DB: Sharing and characterizing data-driven neuroscience models
described in NeuroML},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {3},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1010941},
doi = {10.1371/JOURNAL.PCBI.1010941},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BirgiolasHGGDC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/GriffithsSG22,
author = {John D. Griffiths and
Kelly Shen and
Padraig Gleeson},
title = {Editorial: Neuroinformatics of large-scale brain modelling},
journal = {Frontiers Neuroinformatics},
volume = {16},
year = {2022},
url = {https://doi.org/10.3389/fninf.2022.1043732},
doi = {10.3389/FNINF.2022.1043732},
timestamp = {Mon, 08 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/GriffithsSG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShaikhSVMWAAAAB22,
author = {Bilal Shaikh and
Lucian P. Smith and
Dan Vasilescu and
Gnaneswara Marupilla and
Michael Wilson and
Eran Agmon and
Henry Agnew and
Steven S. Andrews and
Azraf Anwar and
Moritz E. Beber and
Frank T. Bergmann and
David Brooks and
Lutz Brusch and
Laurence Calzone and
Kiri Choi and
Joshua Cooper and
John Detloff and
Brian Drawert and
Michel Dumontier and
G. Bard Ermentrout and
James R. Faeder and
Andrew P. Freiburger and
Fabian Fr{\"{o}}hlich and
Akira Funahashi and
Alan Garny and
John H. Gennari and
Padraig Gleeson and
Anne Goelzer and
Zachary B. Haiman and
Jan Hasenauer and
Joseph L. Hellerstein and
Henning Hermjakob and
Stefan Hoops and
Jon C. Ison and
Diego Jahn and
Henry V. Jakubowski and
Ryann Jordan and
Mat{\'{u}}s Kalas and
Matthias K{\"{o}}nig and
Wolfram Liebermeister and
Rahuman S. Malik{-}Sheriff and
Synchon Mandal and
Robert A. McDougal and
J. Kyle Medley and
Pedro Mendes and
Robert M{\"{u}}ller and
Chris J. Myers and
Aur{\'{e}}lien Naldi and
Tung V. N. Nguyen and
David P. Nickerson and
Brett G. Olivier and
Drashti Patoliya and
Lo{\"{\i}}c Paulev{\'{e}} and
Linda R. Petzold and
Ankita Priya and
Anand K. Rampadarath and
Johann M. Rohwer and
Ali Sinan Saglam and
Dilawar Singh and
Ankur Sinha and
Jacky L. Snoep and
Hugh Sorby and
Ryan K. Spangler and
J{\"{o}}rn Starru{\ss} and
Payton J. Thomas and
David D. van Niekerk and
Daniel Weindl and
Fengkai Zhang and
Anna Zhukova and
Arthur P. Goldberg and
James C. Schaff and
Michael L. Blinov and
Herbert M. Sauro and
Ion I. Moraru and
Jonathan R. Karr},
title = {BioSimulators: a central registry of simulation engines and services
for recommending specific tools},
journal = {Nucleic Acids Res.},
volume = {50},
number = {{W1}},
pages = {108--114},
year = {2022},
url = {https://doi.org/10.1093/nar/gkac331},
doi = {10.1093/NAR/GKAC331},
timestamp = {Mon, 08 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ShaikhSVMWAAAAB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-06732,
author = {Bilal Shaikh and
Lucian P. Smith and
Dan Vasilescu and
Gnaneswara Marupilla and
Michael Wilson and
Eran Agmon and
Henry Agnew and
Steven S. Andrews and
Azraf Anwar and
Moritz E. Beber and
Frank T. Bergmann and
David Brooks and
Lutz Brusch and
Laurence Calzone and
Kiri Choi and
Joshua Cooper and
John Detloff and
Brian Drawert and
Michel Dumontier and
G. Bard Ermentrout and
James R. Faeder and
Andrew P. Freiburger and
Fabian Fr{\"{o}}hlich and
Akira Funahashi and
Alan Garny and
John H. Gennari and
Padraig Gleeson and
Anne Goelzer and
Zachary B. Haiman and
Joseph L. Hellerstein and
Stefan Hoops and
Jon C. Ison and
Diego Jahn and
Henry V. Jakubowski and
Ryann Jordan and
Mat{\'{u}}s Kalas and
Matthias K{\"{o}}nig and
Wolfram Liebermeister and
Synchon Mandal and
Robert A. McDougal and
J. Kyle Medley and
Pedro Mendes and
Robert M{\"{u}}ller and
Chris J. Myers and
Aur{\'{e}}lien Naldi and
Tung V. N. Nguyen and
David P. Nickerson and
Brett G. Olivier and
Drashti Patoliya and
Lo{\"{\i}}c Paulev{\'{e}} and
Linda R. Petzold and
Ankita Priya and
Anand K. Rampadarath and
Johann M. Rohwer and
Ali Sinan Saglam and
Dilawar Singh and
Ankur Sinha and
Jacky L. Snoep and
Hugh Sorby and
Ryan K. Spangler and
J{\"{o}}rn Starru{\ss} and
Payton J. Thomas and
David D. van Niekerk and
Daniel Weindl and
Fengkai Zhang and
Anna Zhukova and
Arthur P. Goldberg and
Michael L. Blinov and
Herbert M. Sauro and
Ion I. Moraru and
Jonathan R. Karr},
title = {BioSimulators: a central registry of simulation engines and services
for recommending specific tools},
journal = {CoRR},
volume = {abs/2203.06732},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.06732},
doi = {10.48550/ARXIV.2203.06732},
eprinttype = {arXiv},
eprint = {2203.06732},
timestamp = {Mon, 08 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-06732.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/SchreiberGGGHKK21,
author = {Falk Schreiber and
Padraig Gleeson and
Martin Golebiewski and
Thomas E. Gorochowski and
Michael Hucka and
Sarah M. Keating and
Matthias K{\"{o}}nig and
Chris J. Myers and
David P. Nickerson and
Bj{\"{o}}rn Sommer and
Dagmar Waltemath},
title = {Specifications of standards in systems and synthetic biology: status
and developments in 2021},
journal = {J. Integr. Bioinform.},
volume = {18},
number = {3},
year = {2021},
url = {https://doi.org/10.1515/jib-2021-0026},
doi = {10.1515/JIB-2021-0026},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/SchreiberGGGHKK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/WaltemathGBGHHI20,
author = {Dagmar Waltemath and
Martin Golebiewski and
Michael L. Blinov and
Padraig Gleeson and
Henning Hermjakob and
Michael Hucka and
Esther Thea Inau and
Sarah M. Keating and
Matthias K{\"{o}}nig and
Olga Krebs and
Rahuman S. Malik{-}Sheriff and
David P. Nickerson and
Ernst Oberortner and
Herbert M. Sauro and
Falk Schreiber and
Lucian P. Smith and
Melanie I. Stefan and
Ulrike Wittig and
Chris J. Myers},
title = {The first 10 years of the international coordination network for standards
in systems and synthetic biology {(COMBINE)}},
journal = {J. Integr. Bioinform.},
volume = {17},
number = {2-3},
year = {2020},
url = {https://doi.org/10.1515/jib-2020-0005},
doi = {10.1515/JIB-2020-0005},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jib/WaltemathGBGHHI20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/DaiHBGPDDGDDGKG20,
author = {Kael Dai and
Juan Hernando and
Yazan N. Billeh and
Sergey L. Gratiy and
Judit Planas and
Andrew P. Davison and
Salvador Dura{-}Bernal and
Padraig Gleeson and
Adrien Devresse and
Benjamin K. Dichter and
Michael Gevaert and
James Gonzalo King and
Werner Van Geit and
Arseny V. Povolotsky and
Eilif M{\"{u}}ller and
Jean{-}Denis Courcol and
Anton Arkhipov},
title = {The {SONATA} data format for efficient description of large-scale
network models},
journal = {PLoS Comput. Biol.},
volume = {16},
number = {2},
year = {2020},
url = {https://doi.org/10.1371/journal.pcbi.1007696},
doi = {10.1371/JOURNAL.PCBI.1007696},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/DaiHBGPDDGDDGKG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/NealKNMKDACCCCA19,
author = {Maxwell Lewis Neal and
Matthias K{\"{o}}nig and
David P. Nickerson and
Goksel Misirli and
Reza Kalbasi and
Andreas Dr{\"{a}}ger and
Koray Atalag and
Vijayalakshmi Chelliah and
Michael T. Cooling and
Daniel L. Cook and
Sharon M. Crook and
Miguel de Alba and
Samuel H. Friedman and
Alan Garny and
John H. Gennari and
Padraig Gleeson and
Martin Golebiewski and
Michael Hucka and
Nick S. Juty and
Chris J. Myers and
Brett G. Olivier and
Herbert M. Sauro and
Martin Scharm and
Jacky L. Snoep and
Vasundra Tour{\'{e}} and
Anil Wipat and
Olaf Wolkenhauer and
Dagmar Waltemath},
title = {Harmonizing semantic annotations for computational models in biology},
journal = {Briefings Bioinform.},
volume = {20},
number = {2},
pages = {540--550},
year = {2019},
url = {https://doi.org/10.1093/bib/bby087},
doi = {10.1093/BIB/BBY087},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/NealKNMKDACCCCA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/SchreiberSBGGHK19,
author = {Falk Schreiber and
Bj{\"{o}}rn Sommer and
Gary D. Bader and
Padraig Gleeson and
Martin Golebiewski and
Michael Hucka and
Sarah M. Keating and
Matthias K{\"{o}}nig and
Chris J. Myers and
David P. Nickerson and
Dagmar Waltemath},
title = {Specifications of Standards in Systems and Synthetic Biology: Status
and Developments in 2019},
journal = {J. Integr. Bioinform.},
volume = {16},
number = {2},
year = {2019},
url = {https://doi.org/10.1515/jib-2019-0035},
doi = {10.1515/JIB-2019-0035},
timestamp = {Wed, 08 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jib/SchreiberSBGGHK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/BlundellBCCCDDM18,
author = {Inga Blundell and
Romain Brette and
Thomas A. Cleland and
Thomas G. Close and
Daniel Coca and
Andrew P. Davison and
Sandra Diaz{-}Pier and
Carlos Fernandez Musoles and
Padraig Gleeson and
Dan F. M. Goodman and
Michael L. Hines and
Michael W. Hopkins and
Pramod S. Kumbhar and
David R. Lester and
B{\'{o}}ris Marin and
Abigail Morrison and
Eric M{\"{u}}ller and
Thomas Nowotny and
Alexander Peyser and
Dimitri Plotnikov and
Paul Richmond and
Andrew Rowley and
Bernhard Rumpe and
Marcel Stimberg and
Alan B. Stokes and
Adam R. Tomkins and
Guido Trensch and
Michael Marmaduke Woodman and
Jochen Martin Eppler},
title = {Code Generation in Computational Neuroscience: {A} Review of Tools
and Techniques},
journal = {Frontiers Neuroinformatics},
volume = {12},
pages = {68},
year = {2018},
url = {https://doi.org/10.3389/fninf.2018.00068},
doi = {10.3389/FNINF.2018.00068},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/BlundellBCCCDDM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/SchreiberBGGHKN18,
author = {Falk Schreiber and
Gary D. Bader and
Padraig Gleeson and
Martin Golebiewski and
Michael Hucka and
Sarah M. Keating and
Nicolas Le Nov{\`{e}}re and
Chris J. Myers and
David P. Nickerson and
Bj{\"{o}}rn Sommer and
Dagmar Waltemath},
title = {Specifications of Standards in Systems and Synthetic Biology: Status
and Developments in 2017},
journal = {J. Integr. Bioinform.},
volume = {15},
number = {1},
year = {2018},
url = {https://doi.org/10.1515/jib-2018-0013},
doi = {10.1515/JIB-2018-0013},
timestamp = {Wed, 08 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jib/SchreiberBGGHKN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wsc/MyersBGGHNNSW17,
author = {Chris J. Myers and
Gary D. Bader and
Padraig Gleeson and
Martin Golebiewski and
Michael Hucka and
Nicolas Le Nov{\`{e}}re and
David P. Nickerson and
Falk Schreiber and
Dagmar Waltemath},
title = {A brief history of {COMBINE}},
booktitle = {2017 Winter Simulation Conference, {WSC} 2017, Las Vegas, NV, USA,
December 3-6, 2017},
pages = {884--895},
publisher = {{IEEE}},
year = {2017},
url = {https://doi.org/10.1109/WSC.2017.8247840},
doi = {10.1109/WSC.2017.8247840},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/wsc/MyersBGGHNNSW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/SchreiberBGGHNM16,
author = {Falk Schreiber and
Gary D. Bader and
Padraig Gleeson and
Martin Golebiewski and
Michael Hucka and
Nicolas Le Nov{\`{e}}re and
Chris J. Myers and
David P. Nickerson and
Bj{\"{o}}rn Sommer and
Dagmar Waltemath},
title = {Specifications of Standards in Systems and Synthetic Biology: Status
and Developments in 2016},
journal = {J. Integr. Bioinform.},
volume = {13},
number = {3},
year = {2016},
url = {https://doi.org/10.2390/biecoll-jib-2016-289},
doi = {10.2390/BIECOLL-JIB-2016-289},
timestamp = {Wed, 08 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jib/SchreiberBGGHNM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ficn/SzigetiGVKPHCCIL14,
author = {Balazs Szigeti and
Padraig Gleeson and
Michael Vella and
Sergey Khayrulin and
Andrey Palyanov and
Jim Hokanson and
Michael Currie and
Matteo Cantarelli and
Giovanni Idili and
Stephen D. Larson},
title = {OpenWorm: an open-science approach to modeling Caenorhabditis elegans},
journal = {Frontiers Comput. Neurosci.},
volume = {8},
pages = {137},
year = {2014},
url = {https://doi.org/10.3389/fncom.2014.00137},
doi = {10.3389/FNCOM.2014.00137},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ficn/SzigetiGVKPHCCIL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/VellaCCDGRSG14,
author = {Michael Vella and
Robert C. Cannon and
Sharon M. Crook and
Andrew P. Davison and
Gautham Ganapathy and
Hugh P. C. Robinson and
R. Angus Silver and
Padraig Gleeson},
title = {libNeuroML and PyLEMS: using Python to combine procedural and declarative
modeling approaches in computational neuroscience},
journal = {Frontiers Neuroinformatics},
volume = {8},
pages = {38},
year = {2014},
url = {https://doi.org/10.3389/fninf.2014.00038},
doi = {10.3389/FNINF.2014.00038},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/VellaCCDGRSG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/CannonGCGMPS14,
author = {Robert C. Cannon and
Padraig Gleeson and
Sharon M. Crook and
Gautham Ganapathy and
B{\'{o}}ris Marin and
Eugenio Piasini and
R. Angus Silver},
title = {{LEMS:} a language for expressing complex biological models in concise
and hierarchical form and its use in underpinning NeuroML 2},
journal = {Frontiers Neuroinformatics},
volume = {8},
pages = {79},
year = {2014},
url = {https://doi.org/10.3389/fninf.2014.00079},
doi = {10.3389/FNINF.2014.00079},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/CannonGCGMPS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/FarinellaRGLS14,
author = {Matteo Farinella and
Daniel T. Ruedt and
Padraig Gleeson and
Frederic Lanore and
R. Angus Silver},
title = {Glutamate-Bound NMDARs Arising from \emph{In Vivo}-like Network Activity
Extend Spatio-temporal Integration in a {L5} Cortical Pyramidal Cell
Model},
journal = {PLoS Comput. Biol.},
volume = {10},
number = {4},
year = {2014},
url = {https://doi.org/10.1371/journal.pcbi.1003590},
doi = {10.1371/JOURNAL.PCBI.1003590},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/FarinellaRGLS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/CrookGCVS14,
author = {Sharon M. Crook and
Padraig Gleeson and
Robert C. Cannon and
Michael Vella and
Angus Silver},
editor = {Dieter Jaeger and
Ranu Jung},
title = {NeuroML},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_96-1},
doi = {10.1007/978-1-4614-7320-6\_96-1},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/CrookGCVS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/Gleeson14,
author = {Padraig Gleeson},
editor = {Dieter Jaeger and
Ranu Jung},
title = {Software Tools for Modelling in Computational Neuroscience: Overview},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_93-1},
doi = {10.1007/978-1-4614-7320-6\_93-1},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/Gleeson14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/Gleeson14a,
author = {Padraig Gleeson},
editor = {Dieter Jaeger and
Ranu Jung},
title = {Synthetic Neuronal Circuits/Networks},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_289-1},
doi = {10.1007/978-1-4614-7320-6\_289-1},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/Gleeson14a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/Gleeson14b,
author = {Padraig Gleeson},
editor = {Dieter Jaeger and
Ranu Jung},
title = {neuroConstruct},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_94-1},
doi = {10.1007/978-1-4614-7320-6\_94-1},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/Gleeson14b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/cn/GleesonSC14,
author = {Padraig Gleeson and
Angus Silver and
Matteo Cantarelli},
editor = {Dieter Jaeger and
Ranu Jung},
title = {Open Source Brain},
booktitle = {Encyclopedia of Computational Neuroscience},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-1-4614-7320-6\_595-3},
doi = {10.1007/978-1-4614-7320-6\_595-3},
timestamp = {Wed, 12 Jul 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/reference/cn/GleesonSC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GleesonCCHBFMDRBBDS10,
author = {Padraig Gleeson and
Sharon M. Crook and
Robert C. Cannon and
Michael L. Hines and
Guy O. Billings and
Matteo Farinella and
Thomas M. Morse and
Andrew P. Davison and
Subhasis Ray and
Upinder S. Bhalla and
Simon R. Barnes and
Yoana D. Dimitrova and
Angus Silver},
title = {NeuroML: {A} Language for Describing Data Driven Models of Neurons
and Networks with a High Degree of Biological Detail},
journal = {PLoS Comput. Biol.},
volume = {6},
number = {6},
year = {2010},
url = {https://doi.org/10.1371/journal.pcbi.1000815},
doi = {10.1371/JOURNAL.PCBI.1000815},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/GleesonCCHBFMDRBBDS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/sci/GunaySLMGCSSVABMLMKTMAF08,
author = {Cengiz G{\"{u}}nay and
Tomasz G. Smolinski and
William W. Lytton and
Thomas M. Morse and
Padraig Gleeson and
Sharon M. Crook and
Volker Steuber and
Angus Silver and
Horatiu Voicu and
Peter Andrews and
Hemant Bokil and
Hiren Maniar and
Catherine Loader and
Samar Mehta and
David Kleinfeld and
David J. Thomson and
Partha P. Mitra and
Gloster Aaron and
Jean{-}Marc Fellous},
editor = {Tomasz G. Smolinski and
Mariofanna G. Milanova and
Aboul Ella Hassanien},
title = {Computational Intelligence in Electrophysiology: Trends and Open Problems},
booktitle = {Applications of Computational Intelligence in Biology: Current Trends
and Open Problems},
series = {Studies in Computational Intelligence},
volume = {122},
pages = {325--359},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78534-7\_14},
doi = {10.1007/978-3-540-78534-7\_14},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/series/sci/GunaySLMGCSSVABMLMKTMAF08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/CrookGHSS07,
author = {Sharon M. Crook and
Padraig Gleeson and
Fredrick W. Howell and
Joseph Svitak and
Angus Silver},
title = {MorphML: Level 1 of the NeuroML Standards for Neuronal Morphology
Data and Model Specification},
journal = {Neuroinformatics},
volume = {5},
number = {2},
pages = {96--104},
year = {2007},
url = {https://doi.org/10.1007/s12021-007-0003-6},
doi = {10.1007/S12021-007-0003-6},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ni/CrookGHSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/CannonGGBCHHMSWS07,
author = {Robert C. Cannon and
Marc{-}Oliver Gewaltig and
Padraig Gleeson and
Upinder S. Bhalla and
Hugo Cornelis and
Michael L. Hines and
Fredrick W. Howell and
Eilif Mueller and
Joel R. Stiles and
Stefan Wils and
Erik De Schutter},
title = {Interoperability of Neuroscience Modeling Software: Current Status
and Future Directions},
journal = {Neuroinformatics},
volume = {5},
number = {2},
pages = {127--138},
year = {2007},
url = {https://doi.org/10.1007/s12021-007-0004-5},
doi = {10.1007/S12021-007-0004-5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/CannonGGBCHHMSWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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