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ORCIDBibTeX records: André Fujita
@article{DBLP:journals/compnet/GuzmanF23,
author = {Grover E. C. Guzman and
Andr{\'{e}} Fujita},
title = {A fast algorithm to approximate the spectral density of locally tree-like
networks with assortativity},
journal = {J. Complex Networks},
volume = {11},
number = {2},
year = {2023},
url = {https://doi.org/10.1093/comnet/cnad005},
doi = {10.1093/COMNET/CNAD005},
timestamp = {Sat, 19 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/compnet/GuzmanF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/RelvasNCBGF23,
author = {Carlos E. M. Relvas and
Asuka Nakata and
Guoan Chen and
David G. Beer and
Noriko Gotoh and
Andr{\'{e}} Fujita},
title = {A model-based clustering algorithm with covariates adjustment and
its application to lung cancer stratification},
journal = {J. Bioinform. Comput. Biol.},
volume = {21},
number = {4},
pages = {2350019:1--2350019:26},
year = {2023},
url = {https://doi.org/10.1142/S0219720023500191},
doi = {10.1142/S0219720023500191},
timestamp = {Tue, 28 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/RelvasNCBGF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wob/VillelaLF23,
author = {Victor Chavauty Villela and
Eduardo Silva Lira and
Andr{\'{e}} Fujita},
editor = {Marcelo da Silva Reis and
Raquel Cardoso de Melo Minardi},
title = {Spectrum-Based Statistical Methods for Directed Graphs with Applications
in Biological Data},
booktitle = {Advances in Bioinformatics and Computational Biology - 16th Brazilian
Symposium on Bioinformatics, {BSB} 2023, Curitiba, Brazil, June 13-16,
2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13954},
pages = {46--57},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-42715-2\_5},
doi = {10.1007/978-3-031-42715-2\_5},
timestamp = {Sun, 10 Sep 2023 08:54:56 +0200},
biburl = {https://dblp.org/rec/conf/wob/VillelaLF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compnet/GuzmanTF22,
author = {Grover E. C. Guzman and
Daniel Yasumasa Takahashi and
Andr{\'{e}} Fujita},
title = {A fast parameter estimator for large complex networks},
journal = {J. Complex Networks},
volume = {10},
number = {3},
year = {2022},
url = {https://doi.org/10.1093/comnet/cnac022},
doi = {10.1093/COMNET/CNAC022},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/compnet/GuzmanTF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compnet/GuzmanSF22,
author = {Grover E. C. Guzman and
Peter F. Stadler and
Andr{\'{e}} Fujita},
title = {Efficient eigenvalue counts for tree-like networks},
journal = {J. Complex Networks},
volume = {10},
number = {5},
year = {2022},
url = {https://doi.org/10.1093/comnet/cnac040},
doi = {10.1093/COMNET/CNAC040},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/compnet/GuzmanSF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ficn/OkuBBBFS22,
author = {Amanda Yumi Ambriola Oku and
Candida Barreto and
Guilherme Bruneri and
Guilherme Brockington and
Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato},
title = {Applications of graph theory to the analysis of fNIRS data in hyperscanning
paradigms},
journal = {Frontiers Comput. Neurosci.},
volume = {16},
year = {2022},
url = {https://doi.org/10.3389/fncom.2022.975743},
doi = {10.3389/FNCOM.2022.975743},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ficn/OkuBBBFS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compnet/SantosFM21,
author = {Suzana de Siqueira Santos and
Andr{\'{e}} Fujita and
Catherine Matias},
title = {Spectral density of random graphs: convergence properties and application
in model fitting},
journal = {J. Complex Networks},
volume = {9},
number = {6},
year = {2021},
url = {https://doi.org/10.1093/comnet/cnab041},
doi = {10.1093/COMNET/CNAB041},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/compnet/SantosFM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/entropy/RibeiroVSF21,
author = {Ad{\`{e}}le Helena Ribeiro and
Maciel Calebe Vidal and
Jo{\~{a}}o Ricardo Sato and
Andr{\'{e}} Fujita},
title = {Granger Causality among Graphs and Application to Functional Brain
Connectivity in Autism Spectrum Disorder},
journal = {Entropy},
volume = {23},
number = {9},
pages = {1204},
year = {2021},
url = {https://doi.org/10.3390/e23091204},
doi = {10.3390/E23091204},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/entropy/RibeiroVSF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/GuzmanF21,
author = {Grover E. C. Guzman and
Andr{\'{e}} Fujita},
title = {Convolution-based linear discriminant analysis for functional data
classification},
journal = {Inf. Sci.},
volume = {581},
pages = {469--478},
year = {2021},
url = {https://doi.org/10.1016/j.ins.2021.09.057},
doi = {10.1016/J.INS.2021.09.057},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/isci/GuzmanF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/netsci/GuzmanSF21,
author = {Grover E. C. Guzman and
Peter F. Stadler and
Andr{\'{e}} Fujita},
title = {Efficient Laplacian spectral density computations for networks with
arbitrary degree distributions},
journal = {Netw. Sci.},
volume = {9},
number = {3},
pages = {312--327},
year = {2021},
url = {https://doi.org/10.1017/nws.2021.10},
doi = {10.1017/NWS.2021.10},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/netsci/GuzmanSF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gecco/BiazziFT21,
author = {Renata B. Biazzi and
Andr{\'{e}} Fujita and
Daniel Y. Takahashi},
editor = {Krzysztof Krawiec},
title = {Predicting soft robot's locomotion fitness},
booktitle = {{GECCO} '21: Genetic and Evolutionary Computation Conference, Companion
Volume, Lille, France, July 10-14, 2021},
pages = {81--82},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3449726.3459417},
doi = {10.1145/3449726.3459417},
timestamp = {Thu, 15 Jul 2021 15:50:04 +0200},
biburl = {https://dblp.org/rec/conf/gecco/BiazziFT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/compnet/FujitaLSBST20,
author = {Andr{\'{e}} Fujita and
Eduardo Silva Lira and
Suzana de Siqueira Santos and
Silvia Yumi Bando and
Gabriela Eleut{\'{e}}rio Soares and
Daniel Yasumasa Takahashi},
title = {A semi-parametric statistical test to compare complex networks},
journal = {J. Complex Networks},
volume = {8},
number = {2},
year = {2020},
url = {https://doi.org/10.1093/comnet/cnz028},
doi = {10.1093/COMNET/CNZ028},
timestamp = {Sun, 22 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/compnet/FujitaLSBST20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2004-02333,
author = {Carlos E. M. Relvas and
Andr{\'{e}} Fujita},
title = {Stage {I} non-small cell lung cancer stratification by using a model-based
clustering algorithm with covariates},
journal = {CoRR},
volume = {abs/2004.02333},
year = {2020},
url = {https://arxiv.org/abs/2004.02333},
eprinttype = {arXiv},
eprint = {2004.02333},
timestamp = {Tue, 14 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2004-02333.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/SatoVSMF18,
author = {Jo{\~{a}}o Ricardo Sato and
Maciel Calebe Vidal and
Suzana de Siqueira Santos and
Katlin Brauer Massirer and
Andr{\'{e}} Fujita},
title = {Complex Network Measures in Autism Spectrum Disorders},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {2},
pages = {581--587},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2015.2476787},
doi = {10.1109/TCBB.2015.2476787},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/SatoVSMF18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csda/FujitaTBVS17,
author = {Andr{\'{e}} Fujita and
Daniel Yasumasa Takahashi and
Joana Bisol Balardin and
Maciel Calebe Vidal and
Jo{\~{a}}o Ricardo Sato},
title = {Correlation between graphs with an application to brain network analysis},
journal = {Comput. Stat. Data Anal.},
volume = {109},
pages = {76--92},
year = {2017},
url = {https://doi.org/10.1016/j.csda.2016.11.016},
doi = {10.1016/J.CSDA.2016.11.016},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/csda/FujitaTBVS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/RodriguesMCFBS16,
author = {Abner Cardoso Rodrigues and
Birajara S. Machado and
Luis Otavio S. F. Caboclo and
Andr{\'{e}} Fujita and
Luiz A. Baccal{\'{a}} and
Koichi Sameshima},
title = {Source and sink nodes in absence seizures},
booktitle = {38th Annual International Conference of the {IEEE} Engineering in
Medicine and Biology Society, {EMBC} 2016, Orlando, FL, USA, August
16-20, 2016},
pages = {2814--2817},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/EMBC.2016.7591315},
doi = {10.1109/EMBC.2016.7591315},
timestamp = {Thu, 14 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/RodriguesMCFBS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SantosTNF14,
author = {Suzana de Siqueira Santos and
Daniel Yasumasa Takahashi and
Asuka Nakata and
Andr{\'{e}} Fujita},
title = {A comparative study of statistical methods used to identify dependencies
between gene expression signals},
journal = {Briefings Bioinform.},
volume = {15},
number = {6},
pages = {906--918},
year = {2014},
url = {https://doi.org/10.1093/bib/bbt051},
doi = {10.1093/BIB/BBT051},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SantosTNF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/csda/FujitaTP14,
author = {Andr{\'{e}} Fujita and
Daniel Yasumasa Takahashi and
Alexandre Galv{\~{a}}o Patriota},
title = {A non-parametric method to estimate the number of clusters},
journal = {Comput. Stat. Data Anal.},
volume = {73},
pages = {27--39},
year = {2014},
url = {https://doi.org/10.1016/j.csda.2013.11.012},
doi = {10.1016/J.CSDA.2013.11.012},
timestamp = {Tue, 18 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/csda/FujitaTP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NagasakiFSSI0M13,
author = {Masao Nagasaki and
Andr{\'{e}} Fujita and
Yayoi Sekiya and
Ayumu Saito and
Emi Ikeda and
Chen Li and
Satoru Miyano},
title = {XiP: a computational environment to create, extend and share workflows},
journal = {Bioinform.},
volume = {29},
number = {1},
pages = {137--139},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/bts630},
doi = {10.1093/BIOINFORMATICS/BTS630},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NagasakiFSSI0M13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SatoTHMF13,
author = {Jo{\~{a}}o Ricardo Sato and
Daniel Yasumasa Takahashi and
Marcelo Queiroz Hoexter and
Katlin Brauer Massirer and
Andr{\'{e}} Fujita},
title = {Measuring network's entropy in {ADHD:} {A} new approach to investigate
neuropsychiatric disorders},
journal = {NeuroImage},
volume = {77},
pages = {44--51},
year = {2013},
url = {https://doi.org/10.1016/j.neuroimage.2013.03.035},
doi = {10.1016/J.NEUROIMAGE.2013.03.035},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SatoTHMF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/KojimaIYFYGM12,
author = {Kaname Kojima and
Seiya Imoto and
Rui Yamaguchi and
Andr{\'{e}} Fujita and
Mai Yamauchi and
Noriko Gotoh and
Satoru Miyano},
title = {Identifying regulational alterations in gene regulatory networks by
state space representation of vector autoregressive models and variational
annealing},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S6},
doi = {10.1186/1471-2164-13-S1-S6},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/KojimaIYFYGM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/FujitaSKSPM12,
author = {Andr{\'{e}} Fujita and
Patricia Severino and
Kaname Kojima and
Jo{\~{a}}o Ricardo Sato and
Alexandre Galv{\~{a}}o Patriota and
Satoru Miyano},
title = {Functional clustering of time series gene expression data by Granger
causality},
journal = {{BMC} Syst. Biol.},
volume = {6},
pages = {137},
year = {2012},
url = {https://doi.org/10.1186/1752-0509-6-137},
doi = {10.1186/1752-0509-6-137},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/FujitaSKSPM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1208-2976,
author = {Daniel Yasumasa Takahashi and
Jo{\~{a}}o Ricardo Sato and
Carlos Eduardo Ferreira and
Andr{\'{e}} Fujita},
title = {Discriminating different classes of biological networks by analyzing
the graphs spectra distribution},
journal = {CoRR},
volume = {abs/1208.2976},
year = {2012},
url = {http://arxiv.org/abs/1208.2976},
eprinttype = {arXiv},
eprint = {1208.2976},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1208-2976.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NagasakiSFTUIJM11,
author = {Masao Nagasaki and
Ayumu Saito and
Andr{\'{e}} Fujita and
Georg Tremmel and
Kazuko Ueno and
Emi Ikeda and
Euna Jeong and
Satoru Miyano},
title = {Systems biology model repository for macrophage pathway simulation},
journal = {Bioinform.},
volume = {27},
number = {11},
pages = {1591--1593},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr173},
doi = {10.1093/BIOINFORMATICS/BTR173},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NagasakiSFTUIJM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FujitaSDYSFSM11,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Marcos Angelo Almeida Demasi and
Rui Yamaguchi and
Teppei Shimamura and
Carlos Eduardo Ferreira and
Mari Cleide Sogayar and
Satoru Miyano},
title = {Inferring Contagion in Regulatory Networks},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {8},
number = {2},
pages = {570--576},
year = {2011},
url = {https://doi.org/10.1109/TCBB.2010.40},
doi = {10.1109/TCBB.2010.40},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/FujitaSDYSFSM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FujitaKPSSM10,
author = {Andr{\'{e}} Fujita and
Kaname Kojima and
Alexandre Galv{\~{a}}o Patriota and
Jo{\~{a}}o Ricardo Sato and
Patricia Severino and
Satoru Miyano},
title = {A fast and robust statistical test based on likelihood ratio with
Bartlett correction to identify Granger causality between gene sets},
journal = {Bioinform.},
volume = {26},
number = {18},
pages = {2349--2351},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq427},
doi = {10.1093/BIOINFORMATICS/BTQ427},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FujitaKPSSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NiidaIYNFSM10,
author = {Atsushi Niida and
Seiya Imoto and
Rui Yamaguchi and
Masao Nagasaki and
Andr{\'{e}} Fujita and
Teppei Shimamura and
Satoru Miyano},
title = {Model-free unsupervised gene set screening based on information enrichment
in expression profiles},
journal = {Bioinform.},
volume = {26},
number = {24},
pages = {3090--3097},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq592},
doi = {10.1093/BIOINFORMATICS/BTQ592},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NiidaIYNFSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/FujitaSKGNSM10,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Kaname Kojima and
Luciana Rodrigues Gomes and
Masao Nagasaki and
Mari Cleide Sogayar and
Satoru Miyano},
title = {Identification of Granger Causality between Gene Sets},
journal = {J. Bioinform. Comput. Biol.},
volume = {8},
number = {4},
pages = {679--701},
year = {2010},
url = {https://doi.org/10.1142/S0219720010004860},
doi = {10.1142/S0219720010004860},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/FujitaSKGNSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SatoFCTBA10,
author = {Jo{\~{a}}o Ricardo Sato and
Andr{\'{e}} Fujita and
Ellison Fernando Cardoso and
Carlos E. Thomaz and
Michael J. Brammer and
Edson Amaro Jr.},
title = {Analyzing the connectivity between regions of interest: An approach
based on cluster Granger causality for fMRI data analysis},
journal = {NeuroImage},
volume = {52},
number = {4},
pages = {1444--1455},
year = {2010},
url = {https://doi.org/10.1016/j.neuroimage.2010.05.022},
doi = {10.1016/J.NEUROIMAGE.2010.05.022},
timestamp = {Wed, 02 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/SatoFCTBA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wob/FujitaSSM10,
author = {Andr{\'{e}} Fujita and
Patricia Severino and
Jo{\~{a}}o Ricardo Sato and
Satoru Miyano},
editor = {Carlos Eduardo Ferreira and
Satoru Miyano and
Peter F. Stadler},
title = {Granger Causality in Systems Biology: Modeling Gene Networks in Time
Series Microarray Data Using Vector Autoregressive Models},
booktitle = {Advances in Bioinformatics and Computational Biology, 5th Brazilian
Symposium on Bioinformatics, {BSB} 2010, Rio de Janeiro, Brazil, August
31-September 3, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6268},
pages = {13--24},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15060-9\_2},
doi = {10.1007/978-3-642-15060-9\_2},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wob/FujitaSSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FujitaPSM09,
author = {Andr{\'{e}} Fujita and
Alexandre Galv{\~{a}}o Patriota and
Jo{\~{a}}o Ricardo Sato and
Satoru Miyano},
title = {The impact of measurement errors in the identification of regulatory
networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {412},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-412},
doi = {10.1186/1471-2105-10-412},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FujitaPSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ShimamuraIYFNM09,
author = {Teppei Shimamura and
Seiya Imoto and
Rui Yamaguchi and
Andr{\'{e}} Fujita and
Masao Nagasaki and
Satoru Miyano},
title = {Recursive regularization for inferring gene networks from time-course
gene expression profiles},
journal = {{BMC} Syst. Biol.},
volume = {3},
pages = {41},
year = {2009},
url = {https://doi.org/10.1186/1752-0509-3-41},
doi = {10.1186/1752-0509-3-41},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/ShimamuraIYFNM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/FujitaSDSFM09,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Marcos Angelo Almeida Demasi and
Mari Cleide Sogayar and
Carlos Eduardo Ferreira and
Satoru Miyano},
title = {Comparing Pearson, Spearman and Hoeffding's d Measure for Gene Expression
Association Analysis},
journal = {J. Bioinform. Comput. Biol.},
volume = {7},
number = {4},
pages = {663--684},
year = {2009},
url = {https://doi.org/10.1142/S0219720009004230},
doi = {10.1142/S0219720009004230},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/FujitaSDSFM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SatoFTMMBJ09,
author = {Jo{\~{a}}o Ricardo Sato and
Andr{\'{e}} Fujita and
Carlos Eduardo Thomaz and
Maria da Gra{\c{c}}a Morais Martin and
Janaina Mour{\~{a}}o Miranda and
Michael John Brammer and
Edson Amaro J{\'{u}}nior},
title = {Evaluating {SVM} and {MLDA} in the extraction of discriminant regions
for mental state prediction},
journal = {NeuroImage},
volume = {46},
number = {1},
pages = {105--114},
year = {2009},
url = {https://doi.org/10.1016/j.neuroimage.2009.01.032},
doi = {10.1016/J.NEUROIMAGE.2009.01.032},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SatoFTMMBJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SatoFTMMBA09,
author = {Jo{\~{a}}o Ricardo Sato and
Andr{\'{e}} Fujita and
Carlos Eduardo Thomaz and
Maria da Gra{\c{c}}a Morais Martin and
Janaina Mour{\~{a}}o Miranda and
Michael John Brammer and
Edson Amaro Jr.},
title = {Corrigendum to "Evaluating {SVM} and {MLDA} in the extraction
of discriminant regions for mental state prediction": [NeuroImage
46 {(2009)} 105-114]},
journal = {NeuroImage},
volume = {47},
number = {1},
pages = {423--425},
year = {2009},
url = {https://doi.org/10.1016/j.neuroimage.2009.04.014},
doi = {10.1016/J.NEUROIMAGE.2009.04.014},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/SatoFTMMBA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/FujitaGSYTSM08,
author = {Andr{\'{e}} Fujita and
Luciana Rodrigues Gomes and
Jo{\~{a}}o Ricardo Sato and
Rui Yamaguchi and
Carlos E. Thomaz and
Mari Cleide Sogayar and
Satoru Miyano},
title = {Multivariate gene expression analysis reveals functional connectivity
changes between normal/tumoral prostates},
journal = {{BMC} Syst. Biol.},
volume = {2},
pages = {106},
year = {2008},
url = {https://doi.org/10.1186/1752-0509-2-106},
doi = {10.1186/1752-0509-2-106},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/FujitaGSYTSM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/FujitaSGSFM08,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Humberto Miguel Garay{-}Malpartida and
Mari Cleide Sogayar and
Carlos Eduardo Ferreira and
Satoru Miyano},
title = {Modeling Nonlinear Gene Regulatory Networks from Time Series Gene
Expression Data},
journal = {J. Bioinform. Comput. Biol.},
volume = {6},
number = {5},
pages = {961--979},
year = {2008},
url = {https://doi.org/10.1142/S0219720008003746},
doi = {10.1142/S0219720008003746},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/FujitaSGSFM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SatoTCFMA08,
author = {Jo{\~{a}}o Ricardo Sato and
Carlos Eduardo Thomaz and
Ellison Fernando Cardoso and
Andr{\'{e}} Fujita and
Maria da Gra{\c{c}}a Morais Martin and
Edson Amaro Jr.},
title = {Hyperplane navigation: {A} method to set individual scores in fMRI
group datasets},
journal = {NeuroImage},
volume = {42},
number = {4},
pages = {1473--1480},
year = {2008},
url = {https://doi.org/10.1016/j.neuroimage.2008.06.024},
doi = {10.1016/J.NEUROIMAGE.2008.06.024},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/SatoTCFMA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bc/SatoFAMMB07,
author = {Jo{\~{a}}o Ricardo Sato and
Andr{\'{e}} Fujita and
Edson Amaro Jr. and
Janaina Mour{\~{a}}o Miranda and
Pedro Alberto Morettin and
Michael John Brammer},
title = {{DWT-CEM:} an algorithm for scale-temporal clustering in fMRI},
journal = {Biol. Cybern.},
volume = {97},
number = {1},
pages = {33--45},
year = {2007},
url = {https://doi.org/10.1007/s00422-007-0154-4},
doi = {10.1007/S00422-007-0154-4},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bc/SatoFAMMB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FujitaSGMSF07,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Humberto Miguel Garay{-}Malpartida and
Pedro Alberto Morettin and
Mari Cleide Sogayar and
Carlos Eduardo Ferreira},
title = {Time-varying modeling of gene expression regulatory networks using
the wavelet dynamic vector autoregressive method},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1623--1630},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm151},
doi = {10.1093/BIOINFORMATICS/BTM151},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FujitaSGMSF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FujitaSFS07,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Carlos Eduardo Ferreira and
Mari Cleide Sogayar},
title = {{GEDI:} a user-friendly toolbox for analysis of large-scale gene expression
data},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-457},
doi = {10.1186/1471-2105-8-457},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FujitaSFS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/FujitaSGYMSF07,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Humberto Miguel Garay{-}Malpartida and
Rui Yamaguchi and
Satoru Miyano and
Mari Cleide Sogayar and
Carlos Eduardo Ferreira},
title = {Modeling gene expression regulatory networks with the sparse vector
autoregressive model},
journal = {{BMC} Syst. Biol.},
volume = {1},
pages = {39},
year = {2007},
url = {https://doi.org/10.1186/1752-0509-1-39},
doi = {10.1186/1752-0509-1-39},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/FujitaSGYMSF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FujitaSRFS06,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Leonardo de Oliveira Rodrigues and
Carlos Eduardo Ferreira and
Mari Cleide Sogayar},
title = {Evaluating different methods of microarray data normalization},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {469},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-469},
doi = {10.1186/1471-2105-7-469},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FujitaSRFS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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