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ORCIDBibTeX records: Martin C. Frith
@article{DBLP:journals/bioinformatics/FrithSS23,
author = {Martin C. Frith and
Jim Shaw and
John L. Spouge},
title = {How to optimally sample a sequence for rapid analysis},
journal = {Bioinform.},
volume = {39},
number = {2},
year = {2023},
url = {https://doi.org/10.1093/bioinformatics/btad057},
doi = {10.1093/BIOINFORMATICS/BTAD057},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrithSS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YaoF23,
author = {Yin Yao and
Martin C. Frith},
title = {Improved DNA-Versus-Protein Homology Search for Protein Fossils},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {20},
number = {3},
pages = {1691--1699},
year = {2023},
url = {https://doi.org/10.1109/TCBB.2022.3177855},
doi = {10.1109/TCBB.2022.3177855},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/YaoF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrithNK21,
author = {Martin C. Frith and
Laurent No{\'{e}} and
Gregory Kucherov},
title = {Minimally overlapping words for sequence similarity search},
journal = {Bioinform.},
volume = {36},
number = {22-23},
pages = {5344--5350},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btaa1054},
doi = {10.1093/BIOINFORMATICS/BTAA1054},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrithNK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/YaoF21,
author = {Yin Yao and
Martin C. Frith},
editor = {Carlos Mart{\'{\i}}n{-}Vide and
Miguel A. Vega{-}Rodr{\'{\i}}guez and
Travis J. Wheeler},
title = {Improved DNA-versus-Protein Homology Search for Protein Fossils},
booktitle = {Algorithms for Computational Biology - 8th International Conference,
AlCoB 2021, Missoula, MT, USA, June 7-11, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12715},
pages = {146--158},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-74432-8\_11},
doi = {10.1007/978-3-030-74432-8\_11},
timestamp = {Wed, 09 Jun 2021 11:58:11 +0200},
biburl = {https://dblp.org/rec/conf/alcob/YaoF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Frith20,
author = {Martin C. Frith},
title = {How sequence alignment scores correspond to probability models},
journal = {Bioinform.},
volume = {36},
number = {2},
pages = {408--415},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btz576},
doi = {10.1093/BIOINFORMATICS/BTZ576},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Frith20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FrithS18,
author = {Martin C. Frith and
Anish Man Singh Shrestha},
title = {A Simplified Description of Child Tables for Sequence Similarity Search},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {6},
pages = {2067--2073},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2018.2796064},
doi = {10.1109/TCBB.2018.2796064},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/FrithS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HamadaOAF17,
author = {Michiaki Hamada and
Yukiteru Ono and
Kiyoshi Asai and
Martin C. Frith},
title = {Training alignment parameters for arbitrary sequencers with {LAST-TRAIN}},
journal = {Bioinform.},
volume = {33},
number = {6},
pages = {926--928},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btw742},
doi = {10.1093/BIOINFORMATICS/BTW742},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HamadaOAF17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PoulsenF17,
author = {Thomas M. Poulsen and
Martin C. Frith},
title = {Variable-order sequence modeling improves bacterial strain discrimination
for Ion Torrent {DNA} reads},
journal = {{BMC} Bioinform.},
volume = {18},
number = {1},
pages = {299},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1710-0},
doi = {10.1186/S12859-017-1710-0},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PoulsenF17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SheetlinPFS16,
author = {Sergey Sheetlin and
Yonil Park and
Martin C. Frith and
John L. Spouge},
title = {{ALP} {\&} {FALP:} {C++} libraries for pairwise local alignment
\emph{E}-values},
journal = {Bioinform.},
volume = {32},
number = {2},
pages = {304--305},
year = {2016},
url = {https://doi.org/10.1093/bioinformatics/btv575},
doi = {10.1093/BIOINFORMATICS/BTV575},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SheetlinPFS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/wabi/2016,
editor = {Martin C. Frith and
Christian N{\o}rgaard Storm Pedersen},
title = {Algorithms in Bioinformatics - 16th International Workshop, {WABI}
2016, Aarhus, Denmark, August 22-24, 2016. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9838},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-43681-4},
doi = {10.1007/978-3-319-43681-4},
isbn = {978-3-319-43680-7},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/2016.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/GutierrezFN15,
author = {Josep Basha Gutierrez and
Martin C. Frith and
Kenta Nakai},
editor = {Francisco M. Ortu{\~{n}}o Guzman and
Ignacio Rojas},
title = {A Genetic Algorithm for Motif Finding Based on Statistical Significance},
booktitle = {Bioinformatics and Biomedical Engineering - Third International Conference,
{IWBBIO} 2015, Granada, Spain, April 15-17, 2015. Proceedings, Part
{I}},
series = {Lecture Notes in Computer Science},
volume = {9043},
pages = {438--449},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-16483-0\_43},
doi = {10.1007/978-3-319-16483-0\_43},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/iwbbio/GutierrezFN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShresthaFH14,
author = {Anish Man Singh Shrestha and
Martin C. Frith and
Paul Horton},
title = {A bioinformatician's guide to the forefront of suffix array construction
algorithms},
journal = {Briefings Bioinform.},
volume = {15},
number = {2},
pages = {138--154},
year = {2014},
url = {https://doi.org/10.1093/bib/bbt081},
doi = {10.1093/BIB/BBT081},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShresthaFH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SheetlinPFS14,
author = {Sergey L. Sheetlin and
Yonil Park and
Martin C. Frith and
John L. Spouge},
title = {Frameshift alignment: statistics and post-genomic applications},
journal = {Bioinform.},
volume = {30},
number = {24},
pages = {3575--3582},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btu576},
doi = {10.1093/BIOINFORMATICS/BTU576},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SheetlinPFS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nature/ConsortiumFKRB14,
author = {The Fantom Consortium and
RIKEN PMII and
RIKEN CLST (DGT) and
Alistair R. R. Forrest and
Hideya Kawaji and
Michael Rehli and
J. Kenneth Baillie and
Michiel J. L. de Hoon and
Vanja Haberle and
Timo Lassmann and
Ivan V. Kulakovskiy and
Marina Lizio and
Masayoshi Itoh and
Robin Andersson and
Christopher J. Mungall and
Terrence F. Meehan and
Sebastian Schmeier and
Nicolas Bertin and
Mette J{\o}rgensen and
Emmanuel Dimont and
Erik Arner and
Christian Schmidl and
Ulf Schaefer and
Yulia A. Medvedeva and
Charles Plessy and
Morana Vitezic and
Jessica Severin and
Colin A. M. Semple and
Yuri Ishizu and
Robert S. Young and
Margherita Francescatto and
Intikhab Alam and
Davide Albanese and
Gabriel M. Altschuler and
Takahiro Arakawa and
John A. C. Archer and
Peter Arner and
Magda Babina and
Sarah Rennie and
Piotr J. Balwierz and
Anthony G. Beckhouse and
Swati Pradhan{-}Bhatt and
Judith A. Blake and
Antje Blumenthal and
Beatrice Bodega and
Alessandro Bonetti and
James Briggs and
Frank Brombacher and
A. Maxwell Burroughs and
Andrea Califano and
Carlo V. Cannistraci and
Daniel Carbajo and
Yun Chen and
Marco Chierici and
Yari Ciani and
Hans Clevers and
Emiliano Dalla and
Carrie A. Davis and
Michael Detmar and
Alexander D. Diehl and
Taeko Dohi and
Finn Drabl{\o}s and
Albert S. B. Edge and
Matthias Edinger and
Karl Ekwall and
Mitsuhiro Endoh and
Hideki Enomoto and
Michela Fagiolini and
Lynsey Fairbairn and
Hai Fang and
Mary C. Farach{-}Carson and
Geoffrey J. Faulkner and
Alexander V. Favorov and
Malcolm E. Fisher and
Martin C. Frith and
Rie Fujita and
Shiro Fukuda and
Cesare Furlanello and
Masaaki Furuno and
Jun{-}ichi Furusawa and
Teunis B. Geijtenbeek and
Andrew P. Gibson and
Thomas R. Gingeras and
Daniel Goldowitz and
Julian Gough and
Sven Guhl and
Reto Guler and
Stefano Gustincich and
Thomas J. Ha and
Masahide Hamaguchi and
Mitsuko Hara and
Matthias Harbers and
Jayson Harshbarger and
Akira Hasegawa and
Yuki Hasegawa and
Takehiro Hashimoto and
Meenhard Herlyn and
Kelly J. Hitchens and
Shannan J. Ho Sui and
Oliver M. Hofmann and
Ilka Hoof and
Fumi Hori and
Lukasz Huminiecki and
Kei Iida and
Tomokatsu Ikawa and
Boris R. Jankovic and
Hui Jia and
Anagha Joshi and
Giuseppe Jurman and
Bogumil Kaczkowski and
Chieko Kai and
Kaoru Kaida and
Ai Kaiho and
Kazuhiro Kajiyama and
Mutsumi Kanamori{-}Katayama and
Artem S. Kasianov and
Takeya Kasukawa and
Shintaro Katayama and
Sachi Kato and
Shuji Kawaguchi and
Hiroshi Kawamoto and
Yuki I. Kawamura and
Tsugumi Kawashima and
Judith S. Kempfle and
Tony J. Kenna and
Juha Kere and
Levon M. Khachigian and
Toshio Kitamura and
S. Peter Klinken and
Alan J. Knox and
Miki Kojima and
Soichi Kojima and
Naoto Kondo and
Haruhiko Koseki and
Shigeo Koyasu and
Sarah Krampitz and
Atsutaka Kubosaki and
Andrew T. Kwon and
Jeroen F. J. Laros and
Weonju Lee and
Andreas Lennartsson and
Kang Li and
Berit Lilje and
Leonard Lipovich and
Alan Mackay{-}Sim and
Ri{-}ichiroh Manabe and
Jessica Cara Mar and
Benoit Marchand and
Anthony Mathelier and
Niklas Mejhert and
Alison M. Meynert and
Yosuke Mizuno and
David A. de Lima Morais and
Hiromasa Morikawa and
Mitsuru Morimoto and
Kazuyo Moro and
Efthymios Motakis and
Hozumi Motohashi and
Christine Mummery and
Mitsuyoshi Murata and
Sayaka Nagao{-}Sato and
Yutaka Nakachi and
Fumio Nakahara and
Toshiyuki Nakamura and
Yukio Nakamura and
Kenichi Nakazato and
Erik van Nimwegen and
Noriko Ninomiya and
Hiromi Nishiyori and
Shohei Noma and
Tadasuke Nozaki and
Soichi Ogishima and
Naganari Ohkura and
Hiroko Ohmiya and
Hiroshi Ohno and
Mitsuhiro Ohshima and
Mariko Okada{-}Hatakeyama and
Yasushi Okazaki and
Valerio Orlando and
Dmitry A. Ovchinnikov and
Arnab Pain and
Robert Passier and
Margaret Patrikakis and
Helena Persson and
Silvano Piazza and
James G. D. Prendergast and
Owen J. L. Rackham and
Jordan A. Ramilowski and
Mamoon Rashid and
Timothy Ravasi and
Patrizia Rizzu and
Marco Roncador and
Sugata Roy and
Morten B. Rye and
Eri Saijyo and
Antti Sajantila and
Akiko Saka and
Shimon Sakaguchi and
Mizuho Sakai and
Hiroki Sato and
Hironori Sato and
Suzana Savvi and
Alka Saxena and
Claudio Schneider and
Erik A. Schultes and
Gundula G. Schulze{-}Tanzil and
Anita Schwegmann and
Thierry Sengstag and
Guojun Sheng and
Hisashi Shimoji and
Yishai Shimoni and
Jay W. Shin and
Christophe Simon and
Daisuke Sugiyama and
Takaaki Sugiyama and
Masanori Suzuki and
Naoko Suzuki and
Rolf K. Swoboda and
Peter A. C. 't Hoen and
Michihira Tagami and
Naoko Takahashi and
Jun Takai and
Hiroshi Tanaka and
Hideki Tatsukawa and
Zuotian Tatum and
Mark Thompson and
Hiroo Toyoda and
Tetsuro Toyoda and
Eivind Valen and
Marc van de Wetering and
Linda M. van den Berg and
Roberto Verardo and
Dipti Vijayan and
Ilya E. Vorontsov and
Wyeth W. Wasserman and
Shoko Watanabe and
Christine A. Wells and
Louise N. Winteringham and
Ernst Wolvetang and
Emily J. Wood and
Yoko Yamaguchi and
Masayuki Yamamoto and
Misako Yoneda and
Yohei Yonekura and
Shigehiro Yoshida and
Susan E. Zabierowski and
Peter G. Zhang and
Xiaobei Zhao and
Silvia Zucchelli and
Kim M. Summers and
Harukazu Suzuki and
Carsten O. Daub and
Jun Kawai and
Peter Heutink and
Winston Hide and
Tom C. Freeman and
Boris Lenhard and
Vladimir B. Bajic and
Martin S. Taylor and
Vsevolod J. Makeev and
Albin Sandelin and
David A. Hume and
Piero Carninci and
Yoshihide Hayashizaki},
title = {A promoter-level mammalian expression atlas},
journal = {Nat.},
volume = {507},
number = {7493},
pages = {462--470},
year = {2014},
url = {https://doi.org/10.1038/nature13182},
doi = {10.1038/NATURE13182},
timestamp = {Tue, 21 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nature/ConsortiumFKRB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShresthaF13,
author = {Anish Man Singh Shrestha and
Martin C. Frith},
title = {An approximate Bayesian approach for mapping paired-end {DNA} reads
to a reference genome},
journal = {Bioinform.},
volume = {29},
number = {8},
pages = {965--972},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt073},
doi = {10.1093/BIOINFORMATICS/BTT073},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShresthaF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KatohF12,
author = {Kazutaka Katoh and
Martin C. Frith},
title = {Adding unaligned sequences into an existing alignment using {MAFFT}
and {LAST}},
journal = {Bioinform.},
volume = {28},
number = {23},
pages = {3144--3146},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts578},
doi = {10.1093/BIOINFORMATICS/BTS578},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KatohF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WijayaFAH12,
author = {Edward Wijaya and
Martin C. Frith and
Kiyoshi Asai and
Paul Horton},
title = {RecountDB: a database of mapped and count corrected transcribed sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1089--1092},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1172},
doi = {10.1093/NAR/GKR1172},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WijayaFAH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HamadaWFA11,
author = {Michiaki Hamada and
Edward Wijaya and
Martin C. Frith and
Kiyoshi Asai},
title = {Probabilistic alignments with quality scores: an application to short-read
mapping toward accurate SNP/indel detection},
journal = {Bioinform.},
volume = {27},
number = {22},
pages = {3085--3092},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr537},
doi = {10.1093/BIOINFORMATICS/BTR537},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HamadaWFA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HamadaYSFA11,
author = {Michiaki Hamada and
Koichiro Yamada and
Kengo Sato and
Martin C. Frith and
Kiyoshi Asai},
title = {CentroidHomfold-LAST: accurate prediction of {RNA} secondary structure
using automatically collected homologous sequences},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Web-Server-Issue},
pages = {100--106},
year = {2011},
url = {https://doi.org/10.1093/nar/gkr290},
doi = {10.1093/NAR/GKR290},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HamadaYSFA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FrithHH10,
author = {Martin C. Frith and
Michiaki Hamada and
Paul Horton},
title = {Parameters for accurate genome alignment},
journal = {{BMC} Bioinform.},
volume = {11},
pages = {80},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-80},
doi = {10.1186/1471-2105-11-80},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FrithHH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WijayaPFFAH10,
author = {Edward Wijaya and
Jean{-}Fran{\c{c}}ois Pessiot and
Martin C. Frith and
Wataru Fujibuchi and
Kiyoshi Asai and
Paul Horton},
title = {In search of true reads: {A} classification approach to next generation
sequencing data selection},
booktitle = {2010 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2010, Hong Kong, December 18, 2010},
pages = {561--566},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/BIBMW.2010.5703862},
doi = {10.1109/BIBMW.2010.5703862},
timestamp = {Wed, 24 Nov 2021 15:06:06 +0100},
biburl = {https://dblp.org/rec/conf/bibm/WijayaPFFAH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BaileyBBFGCRLN09,
author = {Timothy L. Bailey and
Mikael Bod{\'{e}}n and
Fabian A. Buske and
Martin C. Frith and
Charles E. Grant and
Luca Clementi and
Jingyuan Ren and
Wilfred W. Li and
William Stafford Noble},
title = {{MEME} {SUITE:} tools for motif discovery and searching},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Web-Server-Issue},
pages = {202--208},
year = {2009},
url = {https://doi.org/10.1093/nar/gkp335},
doi = {10.1093/NAR/GKP335},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BaileyBBFGCRLN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/FrithSKB08,
author = {Martin C. Frith and
Neil F. W. Saunders and
Bostjan Kobe and
Timothy L. Bailey},
title = {Discovering Sequence Motifs with Arbitrary Insertions and Deletions},
journal = {PLoS Comput. Biol.},
volume = {4},
number = {5},
year = {2008},
url = {https://doi.org/10.1371/journal.pcbi.1000071},
doi = {10.1371/JOURNAL.PCBI.1000071},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/FrithSKB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShimokawaOKFKCH07,
author = {Kazuro Shimokawa and
Yuko Okamura{-}Oho and
Takio Kurita and
Martin C. Frith and
Jun Kawai and
Piero Carninci and
Yoshihide Hayashizaki},
title = {Large-scale clustering of {CAGE} tag expression data},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-161},
doi = {10.1186/1471-2105-8-161},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShimokawaOKFKCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HavertyFW04,
author = {Peter M. Haverty and
Martin C. Frith and
Zhiping Weng},
title = {{CARRIE} web service: automated transcriptional regulatory network
inference and interactive analysis},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {213--216},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh402},
doi = {10.1093/NAR/GKH402},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HavertyFW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FuFHW04,
author = {Yutao Fu and
Martin C. Frith and
Peter M. Haverty and
Zhiping Weng},
title = {MotifViz: an analysis and visualization tool for motif discovery},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {420--423},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh426},
doi = {10.1093/NAR/GKH426},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FuFHW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuFNW03,
author = {Zhenjun Hu and
Martin C. Frith and
Tianhua Niu and
Zhiping Weng},
title = {SeqVISTA: a graphical tool for sequence feature visualization and
comparison},
journal = {{BMC} Bioinform.},
volume = {4},
pages = {1},
year = {2003},
url = {https://doi.org/10.1186/1471-2105-4-1},
doi = {10.1186/1471-2105-4-1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuFNW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EdwardsCVFBE03,
author = {Yvonne J. K. Edwards and
Tim J. Carver and
Tanya Vavouri and
Martin C. Frith and
Martin J. Bishop and
Greg Elgar},
title = {Theatre: a software tool for detailed comparative analysis and visualization
of genomic sequence},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3510--3517},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg501},
doi = {10.1093/NAR/GKG501},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EdwardsCVFBE03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FrithLW03,
author = {Martin C. Frith and
Michael C. Li and
Zhiping Weng},
title = {Cluster-Buster: finding dense clusters of motifs in {DNA} sequences},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3666--3668},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg540},
doi = {10.1093/NAR/GKG540},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FrithLW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrithHW01,
author = {Martin C. Frith and
Ulla Hansen and
Zhiping Weng},
title = {Detection of cis -element clusters in higher eukaryotic {DNA}},
journal = {Bioinform.},
volume = {17},
number = {10},
pages = {878--889},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.10.878},
doi = {10.1093/BIOINFORMATICS/17.10.878},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrithHW01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/EdwardsFEB98,
author = {Yvonne J. K. Edwards and
Martin C. Frith and
Greg Elgar and
Martin J. Bishop},
title = {Theatre: {A} Novel Tool For The Comparative Investigation and Display
of Evolutionary Diversity of Functional and Structural Features in
{DNA} Sequences},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998,
University of Cologne, Germany, October 1998},
publisher = {Oxford University Press},
year = {1998},
timestamp = {Thu, 07 Nov 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/EdwardsFEB98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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