default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDBibTeX records: Kristof Engelen
@article{DBLP:journals/bmcbi/MorettoSVE19,
author = {Marco Moretto and
Paolo Sonego and
Ana B. Villase{\~{n}}or{-}Altamirano and
Kristof Engelen},
title = {First step toward gene expression data integration: transcriptomic
data acquisition with COMMAND{\textgreater}{\_}},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {54},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2643-6},
doi = {10.1186/S12859-019-2643-6},
timestamp = {Fri, 08 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MorettoSVE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/AsnicarMCGSTMEG18,
author = {Francesco Asnicar and
Luca Masera and
Emanuela Coller and
Caterina Gallo and
Nadir Sella and
Thomas Tolio and
Paolo Morettin and
Luca Erculiani and
Francesca Galante and
Stanislau Semeniuta and
Giulia Malacarne and
Kristof Engelen and
Andrea Argentini and
Valter Cavecchia and
Claudio Moser and
Enrico Blanzieri},
title = {NES\({}^{\mbox{2}}\)RA},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {32},
number = {3},
pages = {380--392},
year = {2018},
url = {https://doi.org/10.1177/1094342016662508},
doi = {10.1177/1094342016662508},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhpca/AsnicarMCGSTMEG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MorettoSDBBLGGR16,
author = {Marco Moretto and
Paolo Sonego and
Nicolas Dierckxsens and
Matteo Brilli and
Luca Bianco and
Daniela Ledezma{-}Tejeida and
Socorro Gama{-}Castro and
Marco Galardini and
Chiara Romualdi and
Kris Laukens and
Julio Collado{-}Vides and
Pieter Meysman and
Kristof Engelen},
title = {{COLOMBOS} v3.0: leveraging gene expression compendia for cross-species
analyses},
journal = {Nucleic Acids Res.},
volume = {44},
number = {Database-Issue},
pages = {620--623},
year = {2016},
url = {https://doi.org/10.1093/nar/gkv1251},
doi = {10.1093/NAR/GKV1251},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MorettoSDBBLGGR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/GalardiniBSRRBC15,
author = {Marco Galardini and
Matteo Brilli and
Giulia Spini and
Matteo Rossi and
Bianca Roncaglia and
Alessia Bani and
Manuela Chiancianesi and
Marco Moretto and
Kristof Engelen and
Giovanni Bacci and
Francesco Pini and
Emanuele G. Biondi and
Marco Bazzicalupo and
Alessio Mengoni},
title = {Evolution of Intra-specific Regulatory Networks in a Multipartite
Bacterial Genome},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {9},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004478},
doi = {10.1371/JOURNAL.PCBI.1004478},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/GalardiniBSRRBC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trustcom/AsnicarEGGMMSST15,
author = {Francesco Asnicar and
Luca Erculiani and
Francesca Galante and
Caterina Gallo and
Luca Masera and
Paolo Morettin and
Nadir Sella and
Stanislau Semeniuta and
Thomas Tolio and
Giulia Malacarne and
Kristof Engelen and
Andrea Argentini and
Valter Cavecchia and
Claudio Moser and
Enrico Blanzieri},
title = {Discovering Candidates for Gene Network Expansion by Distributed Volunteer
Computing},
booktitle = {2015 {IEEE} TrustCom/BigDataSE/ISPA, Helsinki, Finland, August 20-22,
2015, Volume 3},
pages = {248--253},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/Trustcom.2015.640},
doi = {10.1109/TRUSTCOM.2015.640},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/trustcom/AsnicarEGGMMSST15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuFMSVME14,
author = {Qiang Fu and
Ana Carolina Fierro and
Pieter Meysman and
Aminael S{\'{a}}nchez{-}Rodr{\'{\i}}guez and
Klaas Vandepoele and
Kathleen Marchal and
Kristof Engelen},
title = {{MAGIC:} access portal to a cross-platform gene expression compendium
for maize},
journal = {Bioinform.},
volume = {30},
number = {9},
pages = {1316--1318},
year = {2014},
url = {https://doi.org/10.1093/bioinformatics/btt739},
doi = {10.1093/BIOINFORMATICS/BTT739},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuFMSVME14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MeysmanSBFLGLMLMCE14,
author = {Pieter Meysman and
Paolo Sonego and
Luca Bianco and
Qiang Fu and
Daniela Ledezma{-}Tejeida and
Socorro Gama{-}Castro and
Veerle Liebens and
Jan Michiels and
Kris Laukens and
Kathleen Marchal and
Julio Collado{-}Vides and
Kristof Engelen},
title = {{COLOMBOS} v2.0: an ever expanding collection of bacterial expression
compendia},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {649--653},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1086},
doi = {10.1093/NAR/GKT1086},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MeysmanSBFLGLMLMCE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/ThilakarathneVEM013,
author = {Pushpike Jayantha Thilakarathne and
Geert Verbeke and
Kristof Engelen and
Kathleen Marchal and
Dan Lin},
title = {Identifying differentially expressed genes in the absence of replication},
journal = {Int. J. Bioinform. Res. Appl.},
volume = {9},
number = {1},
pages = {71--90},
year = {2013},
url = {https://doi.org/10.1504/IJBRA.2013.050654},
doi = {10.1504/IJBRA.2013.050654},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijbra/ThilakarathneVEM013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoCBWSSMEM11,
author = {Hui Zhao and
Lore Cloots and
Tim Van den Bulcke and
Yan Wu and
Riet De Smet and
Valerie Storms and
Pieter Meysman and
Kristof Engelen and
Kathleen Marchal},
title = {Query-based biclustering of gene expression data using Probabilistic
Relational Models},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S37},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S37},
doi = {10.1186/1471-2105-12-S1-S37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoCBWSSMEM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MeysmanDLSWME11,
author = {Pieter Meysman and
Thanh Hai Dang and
Kris Laukens and
Riet De Smet and
Yan Wu and
Kathleen Marchal and
Kristof Engelen},
title = {Use of structural {DNA} properties for the prediction of transcription-factor
binding sites in \emph{Escherichia coli}},
journal = {Nucleic Acids Res.},
volume = {39},
number = {2},
pages = {6},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq1071},
doi = {10.1093/NAR/GKQ1071},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MeysmanDLSWME11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunLBEMM09,
author = {Hong Sun and
Karen Lemmens and
Tim Van den Bulcke and
Kristof Engelen and
Bart De Moor and
Kathleen Marchal},
title = {ViTraM: visualization of transcriptional modules},
journal = {Bioinform.},
volume = {25},
number = {18},
pages = {2450--2451},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp400},
doi = {10.1093/BIOINFORMATICS/BTP400},
timestamp = {Thu, 22 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunLBEMM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/ThilakarathneVEM09,
author = {Pushpike Jayantha Thilakarathne and
Geert Verbeke and
Kristof Engelen and
Kathleen Marchal},
editor = {Hamid R. Arabnia and
Mary Qu Yang},
title = {The Use of Mixed Models to Identify Differentially Expressed Genes
when a Single Replicate per Biological Condition is Present},
booktitle = {International Conference on Bioinformatics {\&} Computational
Biology, {BIOCOMP} 2009, July 13-16, 2009, Las Vegas Nevada, USA,
2 Volumes},
pages = {186--190},
publisher = {{CSREA} Press},
year = {2009},
timestamp = {Wed, 28 Oct 2009 10:44:56 +0100},
biburl = {https://dblp.org/rec/conf/biocomp/ThilakarathneVEM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcbs/SunBMLEM09,
author = {Hong Sun and
Tim Van den Bulcke and
Bart De Moor and
Karen Lemmens and
Kristof Engelen and
Kathleen Marchal},
editor = {Joe Zhang and
Guo{-}Zheng Li and
Jack Y. Yang},
title = {Layout and Post-Processing of Transcriptional Modules},
booktitle = {International Joint Conferences on Bioinformatics, Systems Biology
and Intelligent Computing, {IJCBS} 2009, Shanghai, China, 3-5 August
2009},
pages = {116--121},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/IJCBS.2009.95},
doi = {10.1109/IJCBS.2009.95},
timestamp = {Thu, 22 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcbs/SunBMLEM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FierroTEBMP08,
author = {Ana Carolina Fierro and
Raphael Thuret and
Kristof Engelen and
Gilles Bernot and
Kathleen Marchal and
Nicolas Pollet},
title = {Evaluation of time profile reconstruction from complex two-color microarray
designs},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-1},
doi = {10.1186/1471-2105-9-1},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FierroTEBMP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhaoEMM07,
author = {Hui Zhao and
Kristof Engelen and
Bart De Moor and
Kathleen Marchal},
title = {{CALIB:} a Bioconductor package for estimating absolute expression
levels from two-color microarray data},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1700--1701},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm159},
doi = {10.1093/BIOINFORMATICS/BTM159},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhaoEMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DeunMHEM07,
author = {Katrijn Van Deun and
Kathleen Marchal and
Willem J. Heiser and
Kristof Engelen and
Iven Van Mechelen},
title = {Joint mapping of genes and conditions via multidimensional unfolding
analysis},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-181},
doi = {10.1186/1471-2105-8-181},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DeunMHEM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EngelenNMM06,
author = {Kristof Engelen and
Bart Naudts and
Bart De Moor and
Kathleen Marchal},
title = {A calibration method for estimating absolute expression levels from
microarray data},
journal = {Bioinform.},
volume = {22},
number = {10},
pages = {1251--1258},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl068},
doi = {10.1093/BIOINFORMATICS/BTL068},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EngelenNMM06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/BieMEMCM05,
author = {Tijl De Bie and
Patrick Monsieurs and
Kristof Engelen and
Bart De Moor and
Nello Cristianini and
Kathleen Marchal},
editor = {Russ B. Altman and
Tiffany A. Jung and
Teri E. Klein and
A. Keith Dunker and
Lawrence Hunter},
title = {Discovering Transcriptional Modules from Motif, Chip-Chip and Microarray
Data},
booktitle = {Biocomputing 2005, Proceedings of the Pacific Symposium, Hawaii, USA,
4-8 January 2005},
publisher = {World Scientific},
year = {2005},
url = {http://psb.stanford.edu/psb-online/proceedings/psb05/debie.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/BieMEMCM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EngelenCMM03,
author = {Kristof Engelen and
Bert Coessens and
Kathleen Marchal and
Bart De Moor},
title = {{MARAN:} Normalizing Micro-array Data},
journal = {Bioinform.},
volume = {19},
number = {7},
pages = {893--894},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg085},
doi = {10.1093/BIOINFORMATICS/BTG085},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EngelenCMM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CoessensTAMSEGMMM03,
author = {Bert Coessens and
Gert Thijs and
Stein Aerts and
Kathleen Marchal and
Frank De Smet and
Kristof Engelen and
Patrick Glenisson and
Yves Moreau and
Janick Mathys and
Bart De Moor},
title = {INCLUSive: a web portal and service registry for microarray and regulatory
sequence analysis},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3468--3470},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg615},
doi = {10.1093/NAR/GKG615},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CoessensTAMSEGMMM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
last updated on 2024-08-23 19:21 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
