BibTeX records: Gary F. Egan

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@article{DBLP:journals/cbm/EkanayakePHEC24,
  author       = {Mevan Ekanayake and
                  Kamlesh Pawar and
                  Mehrtash Harandi and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {McSTRA: {A} multi-branch cascaded swin transformer for point spread
                  function-guided robust {MRI} reconstruction},
  journal      = {Comput. Biol. Medicine},
  volume       = {168},
  pages        = {107775},
  year         = {2024},
  url          = {https://doi.org/10.1016/j.compbiomed.2023.107775},
  doi          = {10.1016/J.COMPBIOMED.2023.107775},
  timestamp    = {Fri, 08 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cbm/EkanayakePHEC24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jdi/ChenPEPZE23,
  author       = {Zhaolin Chen and
                  Kamlesh Pawar and
                  Mevan Ekanayake and
                  Cameron Pain and
                  Shenjun Zhong and
                  Gary F. Egan},
  title        = {Deep Learning for Image Enhancement and Correction in Magnetic Resonance
                  Imaging - State-of-the-Art and Challenges},
  journal      = {J. Digit. Imaging},
  volume       = {36},
  number       = {1},
  pages        = {204--230},
  year         = {2023},
  url          = {https://doi.org/10.1007/s10278-022-00721-9},
  doi          = {10.1007/S10278-022-00721-9},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jdi/ChenPEPZE23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/PeirisHCEH23,
  author       = {Himashi Peiris and
                  Munawar Hayat and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  title        = {Uncertainty-guided dual-views for semi-supervised volumetric medical
                  image segmentation},
  journal      = {Nat. Mac. Intell.},
  volume       = {5},
  number       = {7},
  pages        = {724--738},
  year         = {2023},
  url          = {https://doi.org/10.1038/s42256-023-00682-w},
  doi          = {10.1038/S42256-023-00682-W},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/natmi/PeirisHCEH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-00111,
  author       = {Mevan Ekanayake and
                  Kamlesh Pawar and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {PixCUE: Joint Uncertainty Estimation and Image Reconstruction in {MRI}
                  using Deep Pixel Classification},
  journal      = {CoRR},
  volume       = {abs/2303.00111},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2303.00111},
  doi          = {10.48550/ARXIV.2303.00111},
  eprinttype    = {arXiv},
  eprint       = {2303.00111},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2303-00111.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2306-00530,
  author       = {Mevan Ekanayake and
                  Zhifeng Chen and
                  Gary F. Egan and
                  Mehrtash Harandi and
                  Zhaolin Chen},
  title        = {Contrastive Learning {MRI} Reconstruction},
  journal      = {CoRR},
  volume       = {abs/2306.00530},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2306.00530},
  doi          = {10.48550/ARXIV.2306.00530},
  eprinttype    = {arXiv},
  eprint       = {2306.00530},
  timestamp    = {Wed, 14 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2306-00530.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/brain/DissanayakaZFEJ22,
  author       = {Thusharika Dissanayaka and
                  Maryam Zoghi and
                  Michael J. Farrell and
                  Gary F. Egan and
                  Shapour Jaberzadeh},
  title        = {The Effects of Monophasic Anodal Transcranial Pulsed Current Stimulation
                  on Corticospinal Excitability and Motor Performance in Healthy Young
                  Adults: {A} Randomized Double-Blinded Sham-Controlled Study},
  journal      = {Brain Connect.},
  volume       = {12},
  number       = {3},
  pages        = {260--274},
  year         = {2022},
  url          = {https://doi.org/10.1089/brain.2020.0949},
  doi          = {10.1089/BRAIN.2020.0949},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/brain/DissanayakaZFEJ22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/AbramsBDEGGGKHK22,
  author       = {Mathew Birdsall Abrams and
                  Jan G. Bjaalie and
                  Samir Das and
                  Gary F. Egan and
                  Satrajit S. Ghosh and
                  Wojtek James Goscinski and
                  Jeffrey S. Grethe and
                  Jeanette Hellgren Kotaleski and
                  Eric Tatt Wei Ho and
                  David N. Kennedy and
                  Linda J. Lanyon and
                  Trygve B. Leergaard and
                  Helen S. Mayberg and
                  Luciano Milanesi and
                  Roman Moucek and
                  Jean{-}Baptiste Poline and
                  Prasun Roy and
                  Stephen C. Strother and
                  Tong Boon Tang and
                  Paul H. E. Tiesinga and
                  Thomas Wachtler and
                  Daniel K. W{\'{o}}jcik and
                  Maryann E. Martone},
  title        = {A Standards Organization for Open and {FAIR} Neuroscience: the International
                  Neuroinformatics Coordinating Facility},
  journal      = {Neuroinformatics},
  volume       = {20},
  number       = {1},
  pages        = {25--36},
  year         = {2022},
  url          = {https://doi.org/10.1007/s12021-020-09509-0},
  doi          = {10.1007/S12021-020-09509-0},
  timestamp    = {Mon, 24 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/AbramsBDEGGGKHK22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/AbramsBDEGGGKHK22a,
  author       = {Mathew Birdsall Abrams and
                  Jan G. Bjaalie and
                  Samir Das and
                  Gary F. Egan and
                  Satrajit S. Ghosh and
                  Wojtek James Goscinski and
                  Jeffrey S. Grethe and
                  Jeanette Hellgren Kotaleski and
                  Eric Tatt Wei Ho and
                  David N. Kennedy and
                  Linda J. Lanyon and
                  Trygve B. Leergaard and
                  Helen S. Mayberg and
                  Luciano Milanesi and
                  Roman Moucek and
                  Jean{-}Baptiste Poline and
                  Prasun Roy and
                  Stephen C. Strother and
                  Tong Boon Tang and
                  Paul H. E. Tiesinga and
                  Thomas Wachtler and
                  Daniel K. W{\'{o}}jcik and
                  Maryann E. Martone},
  title        = {Correction to: {A} Standards Organization for Open and {FAIR} Neuroscience:
                  the International Neuroinformatics Coordinating Facility},
  journal      = {Neuroinformatics},
  volume       = {20},
  number       = {1},
  pages        = {37--38},
  year         = {2022},
  url          = {https://doi.org/10.1007/s12021-021-09522-x},
  doi          = {10.1007/S12021-021-09522-X},
  timestamp    = {Tue, 18 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/AbramsBDEGGGKHK22a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/ZhongCE22,
  author       = {Shenjun Zhong and
                  Zhaolin Chen and
                  Gary F. Egan},
  title        = {Auto-encoded Latent Representations of White Matter Streamlines for
                  Quantitative Distance Analysis},
  journal      = {Neuroinformatics},
  volume       = {20},
  number       = {4},
  pages        = {1105--1120},
  year         = {2022},
  url          = {https://doi.org/10.1007/s12021-022-09593-4},
  doi          = {10.1007/S12021-022-09593-4},
  timestamp    = {Sun, 13 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ni/ZhongCE22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/brainles-ws/PeirisHCEH22,
  author       = {Himashi Peiris and
                  Munawar Hayat and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  editor       = {Spyridon Bakas and
                  Alessandro Crimi and
                  Ujjwal Baid and
                  Sylwia Malec and
                  Monika Pytlarz and
                  Bhakti Baheti and
                  Maximilian Zenk and
                  Reuben Dorent},
  title        = {Hybrid Window Attention Based Transformer Architecture for Brain Tumor
                  Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - 8th International Workshop, BrainLes 2022, Held in Conjunction
                  with {MICCAI} 2022, Singapore, September 18, 2022, Revised Selected
                  Papers, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {14092},
  pages        = {173--182},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-44153-0\_17},
  doi          = {10.1007/978-3-031-44153-0\_17},
  timestamp    = {Thu, 22 Feb 2024 20:44:54 +0100},
  biburl       = {https://dblp.org/rec/conf/brainles-ws/PeirisHCEH22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PeirisHCEH22,
  author       = {Himashi Peiris and
                  Munawar Hayat and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  editor       = {Linwei Wang and
                  Qi Dou and
                  P. Thomas Fletcher and
                  Stefanie Speidel and
                  Shuo Li},
  title        = {A Robust Volumetric Transformer for Accurate 3D Tumor Segmentation},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2022 - 25th International Conference, Singapore, September 18-22,
                  2022, Proceedings, Part {V}},
  series       = {Lecture Notes in Computer Science},
  volume       = {13435},
  pages        = {162--172},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-16443-9\_16},
  doi          = {10.1007/978-3-031-16443-9\_16},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/PeirisHCEH22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-03777,
  author       = {Himashi Peiris and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  title        = {Reciprocal Adversarial Learning for Brain Tumor Segmentation: {A}
                  Solution to BraTS Challenge 2021 Segmentation Task},
  journal      = {CoRR},
  volume       = {abs/2201.03777},
  year         = {2022},
  url          = {https://arxiv.org/abs/2201.03777},
  eprinttype    = {arXiv},
  eprint       = {2201.03777},
  timestamp    = {Fri, 21 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2201-03777.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2207-08412,
  author       = {Mevan Ekanayake and
                  Kamlesh Pawar and
                  Mehrtash Harandi and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {Multi-head Cascaded Swin Transformers with Attention to k-space Sampling
                  Pattern for Accelerated {MRI} Reconstruction},
  journal      = {CoRR},
  volume       = {abs/2207.08412},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2207.08412},
  doi          = {10.48550/ARXIV.2207.08412},
  eprinttype    = {arXiv},
  eprint       = {2207.08412},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2207-08412.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-07704,
  author       = {Himashi Peiris and
                  Munawar Hayat and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  title        = {Hybrid Window Attention Based Transformer Architecture for Brain Tumor
                  Segmentation},
  journal      = {CoRR},
  volume       = {abs/2209.07704},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2209.07704},
  doi          = {10.48550/ARXIV.2209.07704},
  eprinttype    = {arXiv},
  eprint       = {2209.07704},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2209-07704.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/PawarEC21,
  author       = {Kamlesh Pawar and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {Domain knowledge augmentation of parallel {MR} image reconstruction
                  using deep learning},
  journal      = {Comput. Medical Imaging Graph.},
  volume       = {92},
  pages        = {101968},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.compmedimag.2021.101968},
  doi          = {10.1016/J.COMPMEDIMAG.2021.101968},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cmig/PawarEC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/SudarshanUECA21,
  author       = {Viswanath P. Sudarshan and
                  Uddeshya Upadhyay and
                  Gary F. Egan and
                  Zhaolin Chen and
                  Suyash P. Awate},
  title        = {Towards lower-dose {PET} using physics-based uncertainty-aware multimodal
                  learning with robustness to out-of-distribution data},
  journal      = {Medical Image Anal.},
  volume       = {73},
  pages        = {102187},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.media.2021.102187},
  doi          = {10.1016/J.MEDIA.2021.102187},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/SudarshanUECA21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/LiJWEC21,
  author       = {Shenpeng Li and
                  Sharna D. Jamadar and
                  Phillip G. D. Ward and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {Estimation of simultaneous {BOLD} and dynamic {FDG} metabolic brain
                  activations using a multimodality concatenated {ICA} (mcICA) method},
  journal      = {NeuroImage},
  volume       = {226},
  pages        = {117603},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.neuroimage.2020.117603},
  doi          = {10.1016/J.NEUROIMAGE.2020.117603},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/LiJWEC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ShishegarPGEJJ21,
  author       = {Rosita Shishegar and
                  Fabrizio Pizzagalli and
                  Nellie Georgiou{-}Karistianis and
                  Gary F. Egan and
                  Neda Jahanshad and
                  Leigh A. Johnston},
  title        = {A gyrification analysis approach based on Laplace Beltrami eigenfunction
                  level sets},
  journal      = {NeuroImage},
  volume       = {229},
  pages        = {117751},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.neuroimage.2021.117751},
  doi          = {10.1016/J.NEUROIMAGE.2021.117751},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ShishegarPGEJJ21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/SudarshanLJEAC21,
  author       = {Viswanath P. Sudarshan and
                  Shenpeng Li and
                  Sharna D. Jamadar and
                  Gary F. Egan and
                  Suyash P. Awate and
                  Zhaolin Chen},
  title        = {Incorporation of anatomical {MRI} knowledge for enhanced mapping of
                  brain metabolism using functional {PET}},
  journal      = {NeuroImage},
  volume       = {233},
  pages        = {117928},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.neuroimage.2021.117928},
  doi          = {10.1016/J.NEUROIMAGE.2021.117928},
  timestamp    = {Sun, 16 May 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/SudarshanLJEAC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/brainles-ws/PawarZGEC21,
  author       = {Kamlesh Pawar and
                  Shenjun Zhong and
                  Dilshan Sasanka Goonatillake and
                  Gary F. Egan and
                  Zhaolin Chen},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas},
  title        = {Orthogonal-Nets: {A} Large Ensemble of 2D Neural Networks for 3D Brain
                  Tumor Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - 7th International Workshop, BrainLes 2021, Held in Conjunction
                  with {MICCAI} 2021, Virtual Event, September 27, 2021, Revised Selected
                  Papers, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12963},
  pages        = {54--67},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-031-09002-8\_5},
  doi          = {10.1007/978-3-031-09002-8\_5},
  timestamp    = {Mon, 06 Nov 2023 12:57:51 +0100},
  biburl       = {https://dblp.org/rec/conf/brainles-ws/PawarZGEC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/brainles-ws/PeirisCEH21,
  author       = {Himashi Peiris and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas},
  title        = {Reciprocal Adversarial Learning for Brain Tumor Segmentation: {A}
                  Solution to BraTS Challenge 2021 Segmentation Task},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - 7th International Workshop, BrainLes 2021, Held in Conjunction
                  with {MICCAI} 2021, Virtual Event, September 27, 2021, Revised Selected
                  Papers, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12962},
  pages        = {171--181},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-031-08999-2\_13},
  doi          = {10.1007/978-3-031-08999-2\_13},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/brainles-ws/PeirisCEH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/brainles-ws/PawarZCE21,
  author       = {Kamlesh Pawar and
                  Shenjun Zhong and
                  Zhaolin Chen and
                  Gary F. Egan},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas},
  title        = {Brain Tumor Segmentation Using Two-Stage Convolutional Neural Network
                  for Federated Evaluation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - 7th International Workshop, BrainLes 2021, Held in Conjunction
                  with {MICCAI} 2021, Virtual Event, September 27, 2021, Revised Selected
                  Papers, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12963},
  pages        = {494--505},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-031-09002-8\_43},
  doi          = {10.1007/978-3-031-09002-8\_43},
  timestamp    = {Mon, 08 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/brainles-ws/PawarZCE21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PeirisCEH21,
  author       = {Himashi Peiris and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  editor       = {Marleen de Bruijne and
                  Philippe C. Cattin and
                  St{\'{e}}phane Cotin and
                  Nicolas Padoy and
                  Stefanie Speidel and
                  Yefeng Zheng and
                  Caroline Essert},
  title        = {Duo-SegNet: Adversarial Dual-Views for Semi-supervised Medical Image
                  Segmentation},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2021 - 24th International Conference, Strasbourg, France, September
                  27 - October 1, 2021, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12902},
  pages        = {428--438},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-87196-3\_40},
  doi          = {10.1007/978-3-030-87196-3\_40},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/PeirisCEH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2107-09892,
  author       = {Viswanath P. Sudarshan and
                  Uddeshya Upadhyay and
                  Gary F. Egan and
                  Zhaolin Chen and
                  Suyash P. Awate},
  title        = {Towards Lower-Dose {PET} using Physics-Based Uncertainty-Aware Multimodal
                  Learning with Robustness to Out-of-Distribution Data},
  journal      = {CoRR},
  volume       = {abs/2107.09892},
  year         = {2021},
  url          = {https://arxiv.org/abs/2107.09892},
  eprinttype    = {arXiv},
  eprint       = {2107.09892},
  timestamp    = {Thu, 29 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2107-09892.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2108-11154,
  author       = {Himashi Peiris and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  title        = {Duo-SegNet: Adversarial Dual-Views for Semi-Supervised Medical Image
                  Segmentation},
  journal      = {CoRR},
  volume       = {abs/2108.11154},
  year         = {2021},
  url          = {https://arxiv.org/abs/2108.11154},
  eprinttype    = {arXiv},
  eprint       = {2108.11154},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2108-11154.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2111-13300,
  author       = {Himashi Peiris and
                  Munawar Hayat and
                  Zhaolin Chen and
                  Gary F. Egan and
                  Mehrtash Harandi},
  title        = {A Volumetric Transformer for Accurate 3D Tumor Segmentation},
  journal      = {CoRR},
  volume       = {abs/2111.13300},
  year         = {2021},
  url          = {https://arxiv.org/abs/2111.13300},
  eprinttype    = {arXiv},
  eprint       = {2111.13300},
  timestamp    = {Thu, 02 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2111-13300.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/brain/DissanayakaZHFE20,
  author       = {Thusharika Dissanayaka and
                  Maryam Zoghi and
                  Aron T. Hill and
                  Michael J. Farrell and
                  Gary F. Egan and
                  Shapour Jaberzadeh},
  title        = {The Effect of Transcranial Pulsed Current Stimulation at 4 and 75
                  Hz on Electroencephalography Theta and High Gamma Band Power: {A}
                  Pilot Study},
  journal      = {Brain Connect.},
  volume       = {10},
  number       = {9},
  pages        = {520--531},
  year         = {2020},
  url          = {https://doi.org/10.1089/brain.2020.0756},
  doi          = {10.1089/BRAIN.2020.0756},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/brain/DissanayakaZHFE20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/imst/PawarCZSE20,
  author       = {Kamlesh Pawar and
                  Zhaolin Chen and
                  Jingxin Zhang and
                  N. Jon Shah and
                  Gary F. Egan},
  title        = {Application of compressed sensing using chirp encoded 3D {GRE} and
                  {MPRAGE} sequences},
  journal      = {Int. J. Imaging Syst. Technol.},
  volume       = {30},
  number       = {3},
  pages        = {592--604},
  year         = {2020},
  url          = {https://doi.org/10.1002/ima.22401},
  doi          = {10.1002/IMA.22401},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/imst/PawarCZSE20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/SudarshanECA20,
  author       = {Viswanath P. Sudarshan and
                  Gary F. Egan and
                  Zhaolin Chen and
                  Suyash P. Awate},
  title        = {Joint {PET-MRI} image reconstruction using a patch-based joint-dictionary
                  prior},
  journal      = {Medical Image Anal.},
  volume       = {62},
  pages        = {101669},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.media.2020.101669},
  doi          = {10.1016/J.MEDIA.2020.101669},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/SudarshanECA20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/LiJWPEC20,
  author       = {Shenpeng Li and
                  Sharna D. Jamadar and
                  Phillip G. D. Ward and
                  Malin Premaratne and
                  Gary F. Egan and
                  Zhaolin Chen},
  title        = {Analysis of continuous infusion functional {PET} (fPET) in the human
                  brain},
  journal      = {NeuroImage},
  volume       = {213},
  pages        = {116720},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.neuroimage.2020.116720},
  doi          = {10.1016/J.NEUROIMAGE.2020.116720},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/LiJWPEC20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/WardOOASFSEJ20,
  author       = {Phillip G. D. Ward and
                  Edwina R. Orchard and
                  Stuart Oldham and
                  Aurina Arnatkeviciute and
                  Francesco Sforazzini and
                  Alex Fornito and
                  Elsdon Storey and
                  Gary F. Egan and
                  Sharna D. Jamadar},
  title        = {Individual differences in haemoglobin concentration influence bold
                  fMRI functional connectivity and its correlation with cognition},
  journal      = {NeuroImage},
  volume       = {221},
  pages        = {117196},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.neuroimage.2020.117196},
  doi          = {10.1016/J.NEUROIMAGE.2020.117196},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/WardOOASFSEJ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/CloseWSGCE20,
  author       = {Thomas G. Close and
                  Phillip G. D. Ward and
                  Francesco Sforazzini and
                  Wojtek Goscinski and
                  Zhaolin Chen and
                  Gary F. Egan},
  title        = {A Comprehensive Framework to Capture the Arcana of Neuroimaging Analysis},
  journal      = {Neuroinformatics},
  volume       = {18},
  number       = {1},
  pages        = {109--129},
  year         = {2020},
  url          = {https://doi.org/10.1007/s12021-019-09430-1},
  doi          = {10.1007/S12021-019-09430-1},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/CloseWSGCE20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/PawarCSE19,
  author       = {Kamlesh Pawar and
                  Zhaolin Chen and
                  N. Jon Shah and
                  Gary F. Egan},
  title        = {A Deep Learning Framework for Transforming Image Reconstruction Into
                  Pixel Classification},
  journal      = {{IEEE} Access},
  volume       = {7},
  pages        = {177690--177702},
  year         = {2019},
  url          = {https://doi.org/10.1109/ACCESS.2019.2959037},
  doi          = {10.1109/ACCESS.2019.2959037},
  timestamp    = {Wed, 15 Jan 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/access/PawarCSE19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/JamadarWLSBCE19,
  author       = {Sharna D. Jamadar and
                  Phillip G. D. Ward and
                  Shenpeng Li and
                  Francesco Sforazzini and
                  Jakub Baran and
                  Zhaolin Chen and
                  Gary F. Egan},
  title        = {Simultaneous task-based BOLD-fMRI and {[18-F]} {FDG} functional {PET}
                  for measurement of neuronal metabolism in the human visual cortex},
  journal      = {NeuroImage},
  volume       = {189},
  pages        = {258--266},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.neuroimage.2019.01.003},
  doi          = {10.1016/J.NEUROIMAGE.2019.01.003},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/JamadarWLSBCE19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/brainles-ws/PawarCSE19,
  author       = {Kamlesh Pawar and
                  Zhaolin Chen and
                  N. Jon Shah and
                  Gary F. Egan},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas},
  title        = {An Ensemble of 2D Convolutional Neural Network for 3D Brain Tumor
                  Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - 5th International Workshop, BrainLes 2019, Held in Conjunction
                  with {MICCAI} 2019, Shenzhen, China, October 17, 2019, Revised Selected
                  Papers, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11992},
  pages        = {359--367},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-46640-4\_34},
  doi          = {10.1007/978-3-030-46640-4\_34},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/brainles-ws/PawarCSE19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/SudarshanGECA19,
  author       = {Viswanath P. Sudarshan and
                  Kratika Gupta and
                  Gary F. Egan and
                  Zhaolin Chen and
                  Suyash P. Awate},
  editor       = {Dinggang Shen and
                  Tianming Liu and
                  Terry M. Peters and
                  Lawrence H. Staib and
                  Caroline Essert and
                  Sean Zhou and
                  Pew{-}Thian Yap and
                  Ali R. Khan},
  title        = {Joint Reconstruction of {PET} + Parallel-MRI in a Bayesian Coupled-Dictionary
                  {MRF} Framework},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2019 - 22nd International Conference, Shenzhen, China, October 13-17,
                  2019, Proceedings, Part {III}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11766},
  pages        = {39--47},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-32248-9\_5},
  doi          = {10.1007/978-3-030-32248-9\_5},
  timestamp    = {Mon, 19 Feb 2024 14:24:13 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/SudarshanGECA19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcmi/BaranCSFJSFSCE18,
  author       = {Jakub Baran and
                  Zhaolin Chen and
                  Francesco Sforazzini and
                  Nicholas J. Ferris and
                  Sharna D. Jamadar and
                  Ben Schmitt and
                  David Faul and
                  Nadim Joni Shah and
                  Marian Cholewa and
                  Gary F. Egan},
  title        = {Accurate hybrid template-based and MR-based attenuation correction
                  using {UTE} images for simultaneous {PET/MR} brain imaging applications},
  journal      = {{BMC} Medical Imaging},
  volume       = {18},
  number       = {1},
  pages        = {41:1--41:16},
  year         = {2018},
  url          = {https://doi.org/10.1186/s12880-018-0283-3},
  doi          = {10.1186/S12880-018-0283-3},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcmi/BaranCSFJSFSCE18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/WardFRDNBE18,
  author       = {Phillip G. D. Ward and
                  Nicholas J. Ferris and
                  Parnesh Raniga and
                  David L. Dowe and
                  Amanda C. L. Ng and
                  David G. Barnes and
                  Gary F. Egan},
  title        = {Combining images and anatomical knowledge to improve automated vein
                  segmentation in {MRI}},
  journal      = {NeuroImage},
  volume       = {165},
  pages        = {294--305},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.neuroimage.2017.10.049},
  doi          = {10.1016/J.NEUROIMAGE.2017.10.049},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/WardFRDNBE18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-10831,
  author       = {Kamlesh Pawar and
                  Zhaolin Chen and
                  N. Jon Shah and
                  Gary F. Egan},
  title        = {MoCoNet: Motion Correction in 3D {MPRAGE} images using a Convolutional
                  Neural Network approach},
  journal      = {CoRR},
  volume       = {abs/1807.10831},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.10831},
  eprinttype    = {arXiv},
  eprint       = {1807.10831},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-10831.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/SforazziniCBBCS17,
  author       = {Francesco Sforazzini and
                  Zhaolin Chen and
                  Jakub Baran and
                  Jason Bradley and
                  Alexandra Carey and
                  N. Jon Shah and
                  Gary F. Egan},
  title        = {MR-based attenuation map re-alignment and motion correction in simultaneous
                  brain {MR-PET} imaging},
  booktitle    = {14th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2017, Melbourne, Australia, April 18-21, 2017},
  pages        = {231--234},
  publisher    = {{IEEE}},
  year         = {2017},
  url          = {https://doi.org/10.1109/ISBI.2017.7950508},
  doi          = {10.1109/ISBI.2017.7950508},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/SforazziniCBBCS17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WardFRNBDE17,
  author       = {Phillip G. D. Ward and
                  Nicholas J. Ferris and
                  Parnesh Raniga and
                  Amanda C. L. Ng and
                  David G. Barnes and
                  David L. Dowe and
                  Gary F. Egan},
  title        = {Vein segmentation using shape-based Markov Random Fields},
  booktitle    = {14th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2017, Melbourne, Australia, April 18-21, 2017},
  pages        = {1133--1136},
  publisher    = {{IEEE}},
  year         = {2017},
  url          = {https://doi.org/10.1109/ISBI.2017.7950716},
  doi          = {10.1109/ISBI.2017.7950716},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WardFRNBDE17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PawarCSE17,
  author       = {Kamlesh Pawar and
                  Zhaolin Chen and
                  N. Jon Shah and
                  Gary F. Egan},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas and
                  Hugo J. Kuijf and
                  Bjoern H. Menze and
                  Mauricio Reyes},
  title        = {Residual Encoder and Convolutional Decoder Neural Network for Glioma
                  Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - Third International Workshop, BrainLes 2017, Held in Conjunction
                  with {MICCAI} 2017, Quebec City, QC, Canada, September 14, 2017, Revised
                  Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10670},
  pages        = {263--273},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-75238-9\_23},
  doi          = {10.1007/978-3-319-75238-9\_23},
  timestamp    = {Wed, 25 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/PawarCSE17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/brain/JamadarECJF16,
  author       = {Sharna D. Jamadar and
                  Gary F. Egan and
                  Vince D. Calhoun and
                  Beth Johnson and
                  Joanne Fielding},
  title        = {Intrinsic Connectivity Provides the Baseline Framework for Variability
                  in Motor Performance: {A} Multivariate Fusion Analysis of Low- and
                  High-Frequency Resting-State Oscillations and Antisaccade Performance},
  journal      = {Brain Connect.},
  volume       = {6},
  number       = {6},
  pages        = {505--517},
  year         = {2016},
  url          = {https://doi.org/10.1089/brain.2015.0411},
  doi          = {10.1089/BRAIN.2015.0411},
  timestamp    = {Wed, 07 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/brain/JamadarECJF16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hisas/NguyenRBE15,
  author       = {To{\`{a}}n D. Nguy{\^{e}}n and
                  Parnesh Raniga and
                  David G. Barnes and
                  Gary F. Egan},
  title        = {Design, implementation and operation of a multimodality research imaging
                  informatics repository},
  journal      = {Health Inf. Sci. Syst.},
  volume       = {3},
  number       = {1},
  year         = {2015},
  url          = {https://doi.org/10.1186/2047-2501-3-S1-S6},
  doi          = {10.1186/2047-2501-3-S1-S6},
  timestamp    = {Thu, 28 Nov 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/hisas/NguyenRBE15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/GoscinskiMFMHGTJGKRKNPBNBE14,
  author       = {Wojtek Goscinski and
                  Paul McIntosh and
                  Ulrich Claus Felzmann and
                  Anton Maksimenko and
                  Christopher Hall and
                  Timur Gureyev and
                  Darren Thompson and
                  Andrew L. Janke and
                  Graham J. Galloway and
                  Neil E. B. Killeen and
                  Parnesh Raniga and
                  Owen Kaluza and
                  Amanda Ng and
                  Govinda R. Poudel and
                  David G. Barnes and
                  To{\`{a}}n D. Nguy{\^{e}}n and
                  C. Paul Bonnington and
                  Gary F. Egan},
  title        = {The multi-modal Australian ScienceS Imaging and Visualization Environment
                  {(MASSIVE)} high performance computing infrastructure: applications
                  in neuroscience and neuroinformatics research},
  journal      = {Frontiers Neuroinformatics},
  volume       = {8},
  pages        = {30},
  year         = {2014},
  url          = {https://doi.org/10.3389/fninf.2014.00030},
  doi          = {10.3389/FNINF.2014.00030},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/fini/GoscinskiMFMHGTJGKRKNPBNBE14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/KriegerIHRSTEG14,
  author       = {Steffen N. Krieger and
                  Dimo Ivanov and
                  Laurentius Huber and
                  Elisabeth Roggenhofer and
                  Bernhard Sehm and
                  Robert Turner and
                  Gary F. Egan and
                  Claudine Jo{\"{e}}lle Gauthier},
  title        = {Using carbogen for calibrated fMRI at 7 Tesla: Comparison of direct
                  and modelled estimation of the {M} parameter},
  journal      = {NeuroImage},
  volume       = {84},
  pages        = {605--614},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.neuroimage.2013.09.035},
  doi          = {10.1016/J.NEUROIMAGE.2013.09.035},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/KriegerIHRSTEG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/VergheseKAEV14,
  author       = {Ashika Verghese and
                  Scott C. Kolbe and
                  Andrew J. Anderson and
                  Gary F. Egan and
                  Trichur R. Vidyasagar},
  title        = {Functional size of human visual area {V1:} {A} neural correlate of
                  top-down attention},
  journal      = {NeuroImage},
  volume       = {93},
  pages        = {47--52},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.neuroimage.2014.02.023},
  doi          = {10.1016/J.NEUROIMAGE.2014.02.023},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/VergheseKAEV14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/KriegerGIHRSTE14,
  author       = {Steffen N. Krieger and
                  Claudine Jo{\"{e}}lle Gauthier and
                  Dimo Ivanov and
                  Laurentius Huber and
                  Elisabeth Roggenhofer and
                  Bernhard Sehm and
                  Robert Turner and
                  Gary F. Egan},
  title        = {Regional reproducibility of calibrated {BOLD} functional {MRI:} Implications
                  for the study of cognition and plasticity},
  journal      = {NeuroImage},
  volume       = {101},
  pages        = {8--20},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.neuroimage.2014.06.072},
  doi          = {10.1016/J.NEUROIMAGE.2014.06.072},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/KriegerGIHRSTE14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/DucheREAGSS14,
  author       = {Quentin Duch{\'{e}} and
                  Parnesh Raniga and
                  Gary F. Egan and
                  Oscar Acosta and
                  Giulio Gambarota and
                  Olivier Salvado and
                  Herv{\'{e}} Saint{-}Jalmes},
  editor       = {Polina Golland and
                  Nobuhiko Hata and
                  Christian Barillot and
                  Joachim Hornegger and
                  Robert D. Howe},
  title        = {New Partial Volume Estimation Methods for {MRI} {MP2RAGE}},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2014 - 17th International Conference, Boston, MA, USA, September 14-18,
                  2014, Proceedings, Part {III}},
  series       = {Lecture Notes in Computer Science},
  volume       = {8675},
  pages        = {129--136},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-10443-0\_17},
  doi          = {10.1007/978-3-319-10443-0\_17},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/DucheREAGSS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/PawarEZ14,
  author       = {Kamlesh Pawar and
                  Gary F. Egan and
                  Jingxin Zhang},
  title        = {Multichannel Compressive Sensing {MRI} Using Noiselet Encoding},
  journal      = {CoRR},
  volume       = {abs/1407.5536},
  year         = {2014},
  url          = {http://arxiv.org/abs/1407.5536},
  eprinttype    = {arXiv},
  eprint       = {1407.5536},
  timestamp    = {Wed, 15 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/PawarEZ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bspc/AdamsonJMTHE13,
  author       = {Christopher L. Adamson and
                  Leigh A. Johnston and
                  Iven Mareels and
                  Arthur W. Toga and
                  X. Huang and
                  Gary F. Egan},
  title        = {3D model-based approach to identification of laminar structures of
                  the cerebral cortex: Application to Brodmann areas 17 and 18},
  journal      = {Biomed. Signal Process. Control.},
  volume       = {8},
  number       = {6},
  pages        = {845--857},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.bspc.2013.08.005},
  doi          = {10.1016/J.BSPC.2013.08.005},
  timestamp    = {Sat, 22 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bspc/AdamsonJMTHE13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/DaveyGEJ13,
  author       = {Catherine E. Davey and
                  David B. Grayden and
                  Gary F. Egan and
                  Leigh A. Johnston},
  title        = {Filtering induces correlation in fMRI resting state data},
  journal      = {NeuroImage},
  volume       = {64},
  pages        = {728--740},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.08.022},
  doi          = {10.1016/J.NEUROIMAGE.2012.08.022},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/DaveyGEJ13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/DedeurwaerdereFCSNRFPEO13,
  author       = {Stefanie Dedeurwaerdere and
                  K. Fang and
                  M. Chow and
                  Y.{-}T. Shen and
                  I. Noordman and
                  L. van Raay and
                  Nathan Faggian and
                  M. Porritt and
                  Gary F. Egan and
                  Terence J. O'Brien},
  title        = {Manganese-enhanced {MRI} reflects seizure outcome in a model for mesial
                  temporal lobe epilepsy},
  journal      = {NeuroImage},
  volume       = {68},
  pages        = {30--38},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.11.054},
  doi          = {10.1016/J.NEUROIMAGE.2012.11.054},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/DedeurwaerdereFCSNRFPEO13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ThompsonARFWWDAEI13,
  author       = {Deanne K. Thompson and
                  Christopher L. Adamson and
                  Gehan Roberts and
                  Nathan Faggian and
                  Stephen J. Wood and
                  Simon K. Warfield and
                  Lex W. Doyle and
                  Peter J. Anderson and
                  Gary F. Egan and
                  Terrie E. Inder},
  title        = {Hippocampal shape variations at term equivalent age in very preterm
                  infants compared with term controls: Perinatal predictors and functional
                  significance at age 7},
  journal      = {NeuroImage},
  volume       = {70},
  pages        = {278--287},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.12.053},
  doi          = {10.1016/J.NEUROIMAGE.2012.12.053},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ThompsonARFWWDAEI13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/PawarEZ13,
  author       = {Kamlesh Pawar and
                  Gary F. Egan and
                  Jingxin Zhang},
  title        = {Accelerating k-t sparse using k-space aliasing for dynamic {MRI} imaging},
  booktitle    = {35th Annual International Conference of the {IEEE} Engineering in
                  Medicine and Biology Society, {EMBC} 2013, Osaka, Japan, July 3-7,
                  2013},
  pages        = {2619--2623},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/EMBC.2013.6610077},
  doi          = {10.1109/EMBC.2013.6610077},
  timestamp    = {Wed, 15 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/embc/PawarEZ13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ThompsonIFWADE12,
  author       = {Deanne K. Thompson and
                  Terrie E. Inder and
                  Nathan Faggian and
                  Simon K. Warfield and
                  Peter J. Anderson and
                  Lex W. Doyle and
                  Gary F. Egan},
  title        = {Corpus callosum alterations in very preterm infants: Perinatal correlates
                  and 2 year neurodevelopmental outcomes},
  journal      = {NeuroImage},
  volume       = {59},
  number       = {4},
  pages        = {3571--3581},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.neuroimage.2011.11.057},
  doi          = {10.1016/J.NEUROIMAGE.2011.11.057},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ThompsonIFWADE12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/FarrellCCEM12,
  author       = {Michael J. Farrell and
                  Leonie J. Cole and
                  David Chiapoco and
                  Gary F. Egan and
                  Stuart B. Mazzone},
  title        = {Neural correlates coding stimulus level and perception of capsaicin-evoked
                  urge-to-cough in humans},
  journal      = {NeuroImage},
  volume       = {61},
  number       = {4},
  pages        = {1324--1335},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.03.030},
  doi          = {10.1016/J.NEUROIMAGE.2012.03.030},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/FarrellCCEM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/UllmannKWJKYRPEPBGR12,
  author       = {Jeremy F. P. Ullmann and
                  Marianne D. Keller and
                  Charles Watson and
                  Andrew L. Janke and
                  Nyoman D. Kurniawan and
                  Zhengyi Yang and
                  Kay Richards and
                  George Paxinos and
                  Gary F. Egan and
                  Steven Petrou and
                  Perry F. Bartlett and
                  Graham J. Galloway and
                  David C. Reutens},
  title        = {Segmentation of the {C57BL/6J} mouse cerebellum in magnetic resonance
                  images},
  journal      = {NeuroImage},
  volume       = {62},
  number       = {3},
  pages        = {1408--1414},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.05.061},
  doi          = {10.1016/J.NEUROIMAGE.2012.05.061},
  timestamp    = {Thu, 13 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/UllmannKWJKYRPEPBGR12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/ThompsonAWIWDE12,
  author       = {Deanne K. Thompson and
                  Zohra M. Ahmadzai and
                  Stephen J. Wood and
                  Terrie E. Inder and
                  Simon K. Warfield and
                  Lex W. Doyle and
                  Gary F. Egan},
  title        = {Optimizing Hippocampal Segmentation in Infants Utilizing {MRI} Post-Acquisition
                  Processing},
  journal      = {Neuroinformatics},
  volume       = {10},
  number       = {2},
  pages        = {173--180},
  year         = {2012},
  url          = {https://doi.org/10.1007/s12021-011-9137-7},
  doi          = {10.1007/S12021-011-9137-7},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/ThompsonAWIWDE12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/KilleenLFLGANE12,
  author       = {Neil E. B. Killeen and
                  Jason M. Lohrey and
                  Michael J. Farrell and
                  Wilson Liu and
                  Slavisa Garic and
                  David Abramson and
                  Hoang Nguyen and
                  Gary F. Egan},
  title        = {Integration of modern data management practice with scientific workflows},
  booktitle    = {8th {IEEE} International Conference on E-Science, e-Science 2012,
                  Chicago, IL, USA, October 8-12, 2012},
  pages        = {1--8},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/eScience.2012.6404426},
  doi          = {10.1109/ESCIENCE.2012.6404426},
  timestamp    = {Tue, 20 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eScience/KilleenLFLGANE12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ThompsonIFJWADE11,
  author       = {Deanne K. Thompson and
                  Terrie E. Inder and
                  Nathan Faggian and
                  Leigh A. Johnston and
                  Simon K. Warfield and
                  Peter J. Anderson and
                  Lex W. Doyle and
                  Gary F. Egan},
  title        = {Characterization of the corpus callosum in very preterm and full-term
                  infants utilizing {MRI}},
  journal      = {NeuroImage},
  volume       = {55},
  number       = {2},
  pages        = {479--490},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.neuroimage.2010.12.025},
  doi          = {10.1016/J.NEUROIMAGE.2010.12.025},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ThompsonIFJWADE11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/RichardsWBKYKBBEGPPR11,
  author       = {Kay Richards and
                  Charles Watson and
                  Rachel F. Buckley and
                  Nyoman D. Kurniawan and
                  Zhengyi Yang and
                  Marianne D. Keller and
                  Richard Beare and
                  Perry F. Bartlett and
                  Gary F. Egan and
                  Graham J. Galloway and
                  George Paxinos and
                  Steven Petrou and
                  David C. Reutens},
  title        = {Segmentation of the mouse hippocampal formation in magnetic resonance
                  images},
  journal      = {NeuroImage},
  volume       = {58},
  number       = {3},
  pages        = {732--740},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.neuroimage.2011.06.025},
  doi          = {10.1016/J.NEUROIMAGE.2011.06.025},
  timestamp    = {Thu, 13 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/RichardsWBKYKBBEGPPR11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/NgECJ11,
  author       = {Amanda Ng and
                  Gary F. Egan and
                  Zang{-}Hee Cho and
                  Leigh A. Johnston},
  title        = {Venous vessel boundary delineation at high field using sigmoid-SWI},
  booktitle    = {33rd Annual International Conference of the {IEEE} Engineering in
                  Medicine and Biology Society, {EMBC} 2011, Boston, MA, USA, August
                  30 - Sept. 3, 2011},
  pages        = {2817--2820},
  publisher    = {{IEEE}},
  year         = {2011},
  url          = {https://doi.org/10.1109/IEMBS.2011.6090779},
  doi          = {10.1109/IEMBS.2011.6090779},
  timestamp    = {Wed, 16 Oct 2019 14:14:50 +0200},
  biburl       = {https://dblp.org/rec/conf/embc/NgECJ11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/JohnstonME11,
  author       = {Leigh A. Johnston and
                  Iven M. Y. Mareels and
                  Gary F. Egan},
  title        = {Bayesian model evidence for order selection and correlation testing},
  booktitle    = {33rd Annual International Conference of the {IEEE} Engineering in
                  Medicine and Biology Society, {EMBC} 2011, Boston, MA, USA, August
                  30 - Sept. 3, 2011},
  pages        = {5048--5051},
  publisher    = {{IEEE}},
  year         = {2011},
  url          = {https://doi.org/10.1109/IEMBS.2011.6091250},
  doi          = {10.1109/IEMBS.2011.6091250},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/embc/JohnstonME11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/JohnstonGE11,
  author       = {Leigh A. Johnston and
                  Maria Gavrilescu and
                  Gary F. Egan},
  editor       = {Gabor Fichtinger and
                  Anne L. Martel and
                  Terry M. Peters},
  title        = {A Stochastic Linear Model for fMRI Activation Analyses},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2011 - 14th International Conference, Toronto, Canada, September 18-22,
                  2011, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {6892},
  pages        = {293--301},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-23629-7\_36},
  doi          = {10.1007/978-3-642-23629-7\_36},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/JohnstonGE11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ChenJKOCE10,
  author       = {Zhaolin Chen and
                  Leigh A. Johnston and
                  Dae Hyuk Kwon and
                  Se Hong Oh and
                  Zang{-}Hee Cho and
                  Gary F. Egan},
  title        = {An optimised framework for reconstructing and processing {MR} phase
                  images},
  journal      = {NeuroImage},
  volume       = {49},
  number       = {2},
  pages        = {1289--1300},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.neuroimage.2009.09.071},
  doi          = {10.1016/J.NEUROIMAGE.2009.09.071},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ChenJKOCE10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GeorgiadisFBDGKRHE10,
  author       = {Janniko R. Georgiadis and
                  Michael J. Farrell and
                  Ruud Boessen and
                  Derek A. Denton and
                  Maria Gavrilescu and
                  Rudie Kortekaas and
                  Remco J. Renken and
                  Johannes M. Hoogduin and
                  Gary F. Egan},
  title        = {Dynamic subcortical blood flow during male sexual activity with ecological
                  validity: {A} perfusion fMRI study},
  journal      = {NeuroImage},
  volume       = {50},
  number       = {1},
  pages        = {208--216},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.neuroimage.2009.12.034},
  doi          = {10.1016/J.NEUROIMAGE.2009.12.034},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/GeorgiadisFBDGKRHE10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/MatsudaWSMHME10,
  author       = {Ken Matsuda and
                  Hong X. Wang and
                  Chao Suo and
                  David McCombe and
                  Malcolm K. Horne and
                  Wayne A. Morrison and
                  Gary F. Egan},
  title        = {Retrograde axonal tracing using manganese enhanced magnetic resonance
                  imaging},
  journal      = {NeuroImage},
  volume       = {50},
  number       = {2},
  pages        = {366--374},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.neuroimage.2010.01.008},
  doi          = {10.1016/J.NEUROIMAGE.2010.01.008},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/MatsudaWSMHME10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/LohreyKE09,
  author       = {Jason M. Lohrey and
                  Neil E. B. Killeen and
                  Gary F. Egan},
  title        = {An integrated object model and method framework for subject-centric
                  e-Research applications},
  journal      = {Frontiers Neuroinformatics},
  volume       = {3},
  pages        = {19},
  year         = {2009},
  url          = {https://doi.org/10.3389/neuro.11.019.2009},
  doi          = {10.3389/NEURO.11.019.2009},
  timestamp    = {Thu, 28 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/fini/LohreyKE09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/GengJYBSWE09,
  author       = {Guangqiang Geng and
                  Leigh A. Johnston and
                  Edwin Yan and
                  Joanne M. Britto and
                  David W. Smith and
                  David W. Walker and
                  Gary F. Egan},
  title        = {Biomechanisms for modelling cerebral cortical folding},
  journal      = {Medical Image Anal.},
  volume       = {13},
  number       = {6},
  pages        = {920--930},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.media.2008.12.005},
  doi          = {10.1016/J.MEDIA.2008.12.005},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/GengJYBSWE09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/XiongMWNDEF09,
  author       = {Jinhu Xiong and
                  Liangsuo Ma and
                  Binquan Wang and
                  Shalini Narayana and
                  Eugene P. Duff and
                  Gary F. Egan and
                  Peter T. Fox},
  title        = {Long-term motor training induced changes in regional cerebral blood
                  flow in both task and resting states},
  journal      = {NeuroImage},
  volume       = {45},
  number       = {1},
  pages        = {75--82},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.neuroimage.2008.11.016},
  doi          = {10.1016/J.NEUROIMAGE.2008.11.016},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/XiongMWNDEF09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/BouilleretHVSWEOJ09,
  author       = {Viviane Bouilleret and
                  R. Edward Hogan and
                  Dennis Velakoulis and
                  Michael R. Salzberg and
                  Lei Wang and
                  Gary F. Egan and
                  Terence J. O'Brien and
                  Nigel C. Jones},
  title        = {Morphometric abnormalities and hyperanxiety in genetically epileptic
                  rats: {A} model of psychiatric comorbidity?},
  journal      = {NeuroImage},
  volume       = {45},
  number       = {2},
  pages        = {267--274},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.neuroimage.2008.12.019},
  doi          = {10.1016/J.NEUROIMAGE.2008.12.019},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/BouilleretHVSWEOJ09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/KolbeCNBJKMPBKE09,
  author       = {Scott C. Kolbe and
                  Caron Chapman and
                  Thanh Nguyen and
                  Clare Bajraszewski and
                  Leigh A. Johnston and
                  Michael Kean and
                  Peter Mitchell and
                  Mark Paine and
                  Helmut Butzkueven and
                  Trevor J. Kilpatrick and
                  Gary F. Egan},
  title        = {Optic nerve diffusion changes and atrophy jointly predict visual dysfunction
                  after optic neuritis},
  journal      = {NeuroImage},
  volume       = {45},
  number       = {3},
  pages        = {679--686},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.neuroimage.2008.12.047},
  doi          = {10.1016/J.NEUROIMAGE.2008.12.047},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/KolbeCNBJKMPBKE09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/CareyAED08,
  author       = {Leeanne Carey and
                  David F. Abbott and
                  Gary F. Egan and
                  Geoffrey Donnan},
  title        = {Reproducible activation in BA2, 1 and 3b associated with texture discrimination
                  in healthy volunteers over time},
  journal      = {NeuroImage},
  volume       = {39},
  number       = {1},
  pages        = {40--51},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.neuroimage.2007.08.026},
  doi          = {10.1016/J.NEUROIMAGE.2007.08.026},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/CareyAED08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/JohnstonDME08,
  author       = {Leigh A. Johnston and
                  Eugene P. Duff and
                  Iven Mareels and
                  Gary F. Egan},
  title        = {Nonlinear estimation of the {BOLD} signal},
  journal      = {NeuroImage},
  volume       = {40},
  number       = {2},
  pages        = {504--514},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.neuroimage.2007.11.024},
  doi          = {10.1016/J.NEUROIMAGE.2007.11.024},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/JohnstonDME08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dicta/ChenJFKZE08,
  author       = {Zhaolin Chen and
                  Leigh A. Johnston and
                  Nathan Faggian and
                  Mike Kean and
                  Jingxin Zhang and
                  Gary F. Egan},
  title        = {A Multistage Parallel Magnetic Resonance Image Reconstruction Method},
  booktitle    = {Proceedings of the International Conference on Digital Image Computing:
                  Techniques and Applications, {DICTA} 2008, Canberra, ACT, Australia,
                  1-3 December 2008},
  pages        = {327--334},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/DICTA.2008.53},
  doi          = {10.1109/DICTA.2008.53},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/dicta/ChenJFKZE08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dicta/FaggianCJSCE08,
  author       = {Nathan Faggian and
                  Zhaolin Chen and
                  Leigh A. Johnston and
                  Se{-}Hong Oh and
                  Zang{-}Hee Cho and
                  Gary F. Egan},
  title        = {A Method for Shape Analysis and Segmentation in {MRI}},
  booktitle    = {Proceedings of the International Conference on Digital Image Computing:
                  Techniques and Applications, {DICTA} 2008, Canberra, ACT, Australia,
                  1-3 December 2008},
  pages        = {335--342},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/DICTA.2008.71},
  doi          = {10.1109/DICTA.2008.71},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/dicta/FaggianCJSCE08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/DuffXWCFE07,
  author       = {Eugene P. Duff and
                  Jinhu Xiong and
                  Binquan Wang and
                  Ross Cunnington and
                  Peter T. Fox and
                  Gary F. Egan},
  title        = {Complex spatio-temporal dynamics of fMRI {BOLD:} {A} study of motor
                  learning},
  journal      = {NeuroImage},
  volume       = {34},
  number       = {1},
  pages        = {156--168},
  year         = {2007},
  url          = {https://doi.org/10.1016/j.neuroimage.2006.09.006},
  doi          = {10.1016/J.NEUROIMAGE.2006.09.006},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/DuffXWCFE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/WuBGKFYWFLEK07,
  author       = {Qizhu Wu and
                  Helmut Butzkueven and
                  Melissa Gresle and
                  Frank Kirchhoff and
                  Anna Friedhuber and
                  Qing Yang and
                  Hong Wang and
                  Ke Fang and
                  Hao Lei and
                  Gary F. Egan and
                  Trevor J. Kilpatrick},
  title        = {{MR} diffusion changes correlate with ultra-structurally defined axonal
                  degeneration in murine optic nerve},
  journal      = {NeuroImage},
  volume       = {37},
  number       = {4},
  pages        = {1138--1147},
  year         = {2007},
  url          = {https://doi.org/10.1016/j.neuroimage.2007.06.029},
  doi          = {10.1016/J.NEUROIMAGE.2007.06.029},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/WuBGKFYWFLEK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/DuffCE07,
  author       = {Eugene P. Duff and
                  Ross Cunnington and
                  Gary F. Egan},
  title        = {{REX:} Response Exploration for Neuroimaging Datasets},
  journal      = {Neuroinformatics},
  volume       = {5},
  number       = {4},
  pages        = {223--234},
  year         = {2007},
  url          = {https://doi.org/10.1007/s12021-007-9001-y},
  doi          = {10.1007/S12021-007-9001-Y},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ni/DuffCE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/JohnstonDE06,
  author       = {Leigh A. Johnston and
                  Eugene P. Duff and
                  Gary F. Egan},
  editor       = {Rasmus Larsen and
                  Mads Nielsen and
                  Jon Sporring},
  title        = {Particle Filtering for Nonlinear {BOLD} Signal Analysis},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2006, 9th International Conference, Copenhagen, Denmark, October 1-6,
                  2006, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {4191},
  pages        = {292--299},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11866763\_36},
  doi          = {10.1007/11866763\_36},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/JohnstonDE06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocn/PodzebenkoEW05,
  author       = {Katherine Podzebenko and
                  Gary F. Egan and
                  John D. G. Watson},
  title        = {Real and Imaginary Rotary Motion Processing: Functional Parcellation
                  of the Human Parietal Lobe Revealed by fMRI},
  journal      = {J. Cogn. Neurosci.},
  volume       = {17},
  number       = {1},
  pages        = {24--36},
  year         = {2005},
  url          = {https://doi.org/10.1162/0898929052879996},
  doi          = {10.1162/0898929052879996},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jocn/PodzebenkoEW05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/HarrisonSYPBSEO05,
  author       = {Ben J. Harrison and
                  Marnie E. Shaw and
                  Murat Y{\"{u}}cel and
                  Rosemary Purcell and
                  Warrick J. Brewer and
                  Stephen C. Strother and
                  Gary F. Egan and
                  James S. Olver and
                  Pradeep J. Nathan and
                  Christos Pantelis},
  title        = {Functional connectivity during Stroop task performance},
  journal      = {NeuroImage},
  volume       = {24},
  number       = {1},
  pages        = {181--191},
  year         = {2005},
  url          = {https://doi.org/10.1016/j.neuroimage.2004.08.033},
  doi          = {10.1016/J.NEUROIMAGE.2004.08.033},
  timestamp    = {Sat, 05 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/HarrisonSYPBSEO05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/KolbeMLSBE05,
  author       = {Scott C. Kolbe and
                  Tianchi Ma and
                  Wei Liu and
                  Wee Siong Soh and
                  Rajkumar Buyya and
                  Gary F. Egan},
  title        = {A Platform for Distributed Analysis of Neuroimaging Data on Global
                  Grids},
  booktitle    = {First International Conference on e-Science and Grid Technologies
                  (e-Science 2005), 5-8 December 2005, Melbourne, Australia},
  pages        = {72--79},
  publisher    = {{IEEE} Computer Society},
  year         = {2005},
  url          = {https://doi.org/10.1109/E-SCIENCE.2005.9},
  doi          = {10.1109/E-SCIENCE.2005.9},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/eScience/KolbeMLSBE05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icnc/EganLSH05,
  author       = {Gary F. Egan and
                  Wei Liu and
                  Wee Siong Soh and
                  Du Thanh Hang},
  editor       = {Lipo Wang and
                  Ke Chen and
                  Yew{-}Soon Ong},
  title        = {Australian Neuroinformatics Research - Grid Computing and e-Research},
  booktitle    = {Advances in Natural Computation, First International Conference, {ICNC}
                  2005, Changsha, China, August 27-29, 2005, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3610},
  pages        = {1057--1064},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11539087\_142},
  doi          = {10.1007/11539087\_142},
  timestamp    = {Tue, 08 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icnc/EganLSH05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsonJIRME05,
  author       = {Christopher L. Adamson and
                  Leigh A. Johnston and
                  Terrie E. Inder and
                  Sandra Rees and
                  Iven M. Y. Mareels and
                  Gary F. Egan},
  editor       = {James S. Duncan and
                  Guido Gerig},
  title        = {A Tracking Approach to Parcellation of the Cerebral Cortex},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2005, 8th International Conference, Palm Springs, CA, USA, October
                  26-29, 2005, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3749},
  pages        = {294--301},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11566465\_37},
  doi          = {10.1007/11566465\_37},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/AdamsonJIRME05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ShawSGPWWAJE03,
  author       = {Marnie E. Shaw and
                  Stephen C. Strother and
                  Maria Gavrilescu and
                  Katherine Podzebenko and
                  Anthony B. Waites and
                  John D. G. Watson and
                  Jon R. Anderson and
                  Graeme D. Jackson and
                  Gary F. Egan},
  title        = {Evaluating subject specific preprocessing choices in multisubject
                  fMRI data sets using data-driven performance metrics},
  journal      = {NeuroImage},
  volume       = {19},
  number       = {3},
  pages        = {988--1001},
  year         = {2003},
  url          = {https://doi.org/10.1016/S1053-8119(03)00116-2},
  doi          = {10.1016/S1053-8119(03)00116-2},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ShawSGPWWAJE03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/EckersleyESTNSMJRHHJKLMMSNRRRSTUPVWWT03,
  author       = {Peter Eckersley and
                  Gary F. Egan and
                  Erik De Schutter and
                  Yiyuan Tang and
                  Mirko Novak and
                  V{\'{a}}clav Sebesta and
                  Line Matthiessen and
                  Iiro P. J{\"{a}}{\"{a}}skel{\"{a}}inen and
                  Ulla Ruotsalainen and
                  Andreas V. M. Herz and
                  K. Peter Hoffmann and
                  Raphael Ritz and
                  Viji Ravindranath and
                  Francesco Beltrame and
                  Shun{-}ichi Amari and
                  Shiro Usui and
                  Soo{-}Young Lee and
                  Jaap van Pelt and
                  Jan G. Bjaalie and
                  Andrzej Wr{\'{o}}bel and
                  Fernando Mira da Silva and
                  Carmen Gonz{\'{a}}lez and
                  Sten Grillner and
                  Paul F. M. J. Verschure and
                  Turgay Dalkara and
                  Robert Bennett and
                  David Willshaw and
                  Stephen H. Koslow and
                  Perry L. Miller and
                  Shankar Subramaniam and
                  Arthur W. Toga},
  title        = {Neuroscience data and tool sharing - {A} legal and policy framework
                  for neuroinformatics},
  journal      = {Neuroinformatics},
  volume       = {1},
  number       = {2},
  pages        = {149--165},
  year         = {2003},
  url          = {https://doi.org/10.1007/s12021-003-0002-1},
  doi          = {10.1007/S12021-003-0002-1},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ni/EckersleyESTNSMJRHHJKLMMSNRRRSTUPVWWT03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/PodzebenkoEW02,
  author       = {Katherine Podzebenko and
                  Gary F. Egan and
                  John D. G. Watson},
  title        = {Widespread Dorsal Stream Activation during a Parametric Mental Rotation
                  Task, Revealed with Functional Magnetic Resonance Imaging},
  journal      = {NeuroImage},
  volume       = {15},
  number       = {3},
  pages        = {547--558},
  year         = {2002},
  url          = {https://doi.org/10.1006/nimg.2001.0999},
  doi          = {10.1006/NIMG.2001.0999},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/PodzebenkoEW02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ShawSMMACE02,
  author       = {Marnie E. Shaw and
                  Stephen C. Strother and
                  Alexander C. McFarlane and
                  Philip Morris and
                  Jon R. Anderson and
                  C. Richard Clark and
                  Gary F. Egan},
  title        = {Abnormal Functional Connectivity in Posttraumatic Stress Disorder},
  journal      = {NeuroImage},
  volume       = {15},
  number       = {3},
  pages        = {661--674},
  year         = {2002},
  url          = {https://doi.org/10.1006/nimg.2001.1024},
  doi          = {10.1006/NIMG.2001.1024},
  timestamp    = {Wed, 16 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ShawSMMACE02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GavrilescuSSESE02,
  author       = {Maria Gavrilescu and
                  Marnie E. Shaw and
                  Geoffrey W. Stuart and
                  Peter Eckersley and
                  Imants D. Svalbe and
                  Gary F. Egan},
  title        = {Simulation of the Effects of Global Normalization Procedures in Functional
                  {MRI}},
  journal      = {NeuroImage},
  volume       = {17},
  number       = {2},
  pages        = {532--542},
  year         = {2002},
  url          = {https://doi.org/10.1006/nimg.2002.1226},
  doi          = {10.1006/NIMG.2002.1226},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/GavrilescuSSESE02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cogsr/CastielloBETKD00,
  author       = {Umberto Castiello and
                  Kerry M. Bennett and
                  Gary F. Egan and
                  Henri Jacques Tochon{-}Danguy and
                  Ada Kritikos and
                  Judith Dunai},
  title        = {Human inferior parietal cortex 'programs' the action class of grasping},
  journal      = {Cogn. Syst. Res.},
  volume       = {1},
  number       = {2},
  pages        = {89--97},
  year         = {2000},
  url          = {https://doi.org/10.1016/S1389-0417(99)00011-X},
  doi          = {10.1016/S1389-0417(99)00011-X},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cogsr/CastielloBETKD00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/BarnesEOA97,
  author       = {David G. Barnes and
                  Gary F. Egan and
                  G. O'Keefe and
                  David F. Abbott},
  title        = {Characterization of Dynamic 3-D {PET} Imaging for Functional Brain
                  Mapping},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {16},
  number       = {3},
  pages        = {261--269},
  year         = {1997},
  url          = {https://doi.org/10.1109/42.585760},
  doi          = {10.1109/42.585760},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tmi/BarnesEOA97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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