BibTeX records: Riccardo Dondi

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@article{DBLP:journals/algorithms/LazzarinettiDMZ24,
  author       = {Giorgio Lazzarinetti and
                  Riccardo Dondi and
                  Sara Manzoni and
                  Italo Zoppis},
  title        = {An Attention-Based Method for the Minimum Vertex Cover Problem on
                  Complex Networks},
  journal      = {Algorithms},
  volume       = {17},
  number       = {2},
  pages        = {72},
  year         = {2024},
  url          = {https://doi.org/10.3390/a17020072},
  doi          = {10.3390/A17020072},
  timestamp    = {Mon, 01 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithms/LazzarinettiDMZ24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sand/DondiL24,
  author       = {Riccardo Dondi and
                  Manuel Lafond},
  editor       = {Arnaud Casteigts and
                  Fabian Kuhn},
  title        = {On the Complexity of Temporal Arborescence Reconfiguration},
  booktitle    = {3rd Symposium on Algorithmic Foundations of Dynamic Networks, {SAND}
                  2024, June 5-7, 2024, Patras, Greece},
  series       = {LIPIcs},
  volume       = {292},
  pages        = {10:1--10:15},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2024},
  url          = {https://doi.org/10.4230/LIPIcs.SAND.2024.10},
  doi          = {10.4230/LIPICS.SAND.2024.10},
  timestamp    = {Wed, 21 Aug 2024 22:46:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sand/DondiL24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sand/DondiMOPT24,
  author       = {Riccardo Dondi and
                  Fabrizio Montecchiani and
                  Giacomo Ortali and
                  Tommaso Piselli and
                  Alessandra Tappini},
  editor       = {Arnaud Casteigts and
                  Fabian Kuhn},
  title        = {Partial Temporal Vertex Cover with Bounded Activity Intervals},
  booktitle    = {3rd Symposium on Algorithmic Foundations of Dynamic Networks, {SAND}
                  2024, June 5-7, 2024, Patras, Greece},
  series       = {LIPIcs},
  volume       = {292},
  pages        = {11:1--11:14},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2024},
  url          = {https://doi.org/10.4230/LIPIcs.SAND.2024.11},
  doi          = {10.4230/LIPICS.SAND.2024.11},
  timestamp    = {Mon, 03 Jun 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sand/DondiMOPT24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/DondiL23,
  author       = {Riccardo Dondi and
                  Manuel Lafond},
  title        = {On the Tractability of Covering a Graph with 2-Clubs},
  journal      = {Algorithmica},
  volume       = {85},
  number       = {4},
  pages        = {992--1028},
  year         = {2023},
  url          = {https://doi.org/10.1007/s00453-022-01062-3},
  doi          = {10.1007/S00453-022-01062-3},
  timestamp    = {Sat, 13 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithmica/DondiL23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/DondiH23,
  author       = {Riccardo Dondi and
                  Danny Hermelin},
  title        = {Computing the \emph{k} densest subgraphs of a graph},
  journal      = {Inf. Process. Lett.},
  volume       = {179},
  pages        = {106316},
  year         = {2023},
  url          = {https://doi.org/10.1016/j.ipl.2022.106316},
  doi          = {10.1016/J.IPL.2022.106316},
  timestamp    = {Fri, 04 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ipl/DondiH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/netmahib/HosseinzadehCGD23,
  author       = {Mohammad Mehdi Hosseinzadeh and
                  Mario Cannataro and
                  Pietro Hiram Guzzi and
                  Riccardo Dondi},
  title        = {Temporal networks in biology and medicine: a survey on models, algorithms,
                  and tools},
  journal      = {Netw. Model. Anal. Health Informatics Bioinform.},
  volume       = {12},
  number       = {1},
  pages        = {10},
  year         = {2023},
  url          = {https://doi.org/10.1007/s13721-022-00406-x},
  doi          = {10.1007/S13721-022-00406-X},
  timestamp    = {Sun, 15 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/netmahib/HosseinzadehCGD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/netsci/DondiH23,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  title        = {Colorful path detection in vertex-colored temporal},
  journal      = {Netw. Sci.},
  volume       = {11},
  number       = {4},
  pages        = {615--631},
  year         = {2023},
  url          = {https://doi.org/10.1017/nws.2023.17},
  doi          = {10.1017/NWS.2023.17},
  timestamp    = {Tue, 28 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/netsci/DondiH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/snam/DondiGHM23,
  author       = {Riccardo Dondi and
                  Pietro Hiram Guzzi and
                  Mohammad Mehdi Hosseinzadeh and
                  Marianna Milano},
  title        = {Dense subgraphs in temporal social networks},
  journal      = {Soc. Netw. Anal. Min.},
  volume       = {13},
  number       = {1},
  pages        = {128},
  year         = {2023},
  url          = {https://doi.org/10.1007/s13278-023-01136-2},
  doi          = {10.1007/S13278-023-01136-2},
  timestamp    = {Wed, 01 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/snam/DondiGHM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/Dondi23,
  author       = {Riccardo Dondi},
  title        = {Untangling temporal graphs of bounded degree},
  journal      = {Theor. Comput. Sci.},
  volume       = {969},
  pages        = {114040},
  year         = {2023},
  url          = {https://doi.org/10.1016/j.tcs.2023.114040},
  doi          = {10.1016/J.TCS.2023.114040},
  timestamp    = {Tue, 12 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/Dondi23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/Dondi023,
  author       = {Riccardo Dondi and
                  Alexandru Popa},
  editor       = {Sun{-}Yuan Hsieh and
                  Ling{-}Ju Hung and
                  Chia{-}Wei Lee},
  title        = {Timeline Cover in Temporal Graphs: Exact and Approximation Algorithms},
  booktitle    = {Combinatorial Algorithms - 34th International Workshop, {IWOCA} 2023,
                  Tainan, Taiwan, June 7-10, 2023, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {13889},
  pages        = {173--184},
  publisher    = {Springer},
  year         = {2023},
  url          = {https://doi.org/10.1007/978-3-031-34347-6\_15},
  doi          = {10.1007/978-3-031-34347-6\_15},
  timestamp    = {Mon, 26 Jun 2023 15:55:36 +0200},
  biburl       = {https://dblp.org/rec/conf/iwoca/Dondi023.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwpec/DondiL23,
  author       = {Riccardo Dondi and
                  Manuel Lafond},
  editor       = {Neeldhara Misra and
                  Magnus Wahlstr{\"{o}}m},
  title        = {An {FPT} Algorithm for Temporal Graph Untangling},
  booktitle    = {18th International Symposium on Parameterized and Exact Computation,
                  {IPEC} 2023, September 6-8, 2023, Amsterdam, The Netherlands},
  series       = {LIPIcs},
  volume       = {285},
  pages        = {12:1--12:16},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2023},
  url          = {https://doi.org/10.4230/LIPIcs.IPEC.2023.12},
  doi          = {10.4230/LIPICS.IPEC.2023.12},
  timestamp    = {Wed, 21 Aug 2024 22:46:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iwpec/DondiL23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2307-00786,
  author       = {Riccardo Dondi and
                  Manuel Lafond},
  title        = {An {FTP} Algorithm for Temporal Graph Untangling},
  journal      = {CoRR},
  volume       = {abs/2307.00786},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2307.00786},
  doi          = {10.48550/ARXIV.2307.00786},
  eprinttype    = {arXiv},
  eprint       = {2307.00786},
  timestamp    = {Mon, 10 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2307-00786.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iandc/DondiMZ22,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {On the complexity of approximately matching a string to a directed
                  graph},
  journal      = {Inf. Comput.},
  volume       = {288},
  pages        = {104748},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.ic.2021.104748},
  doi          = {10.1016/J.IC.2021.104748},
  timestamp    = {Tue, 06 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/iandc/DondiMZ22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/GasconDE22,
  author       = {Mathieu Gascon and
                  Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  title        = {MUL-tree pruning for consistency and optimal reconciliation - complexity
                  and algorithms},
  journal      = {Theor. Comput. Sci.},
  volume       = {937},
  pages        = {22--38},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.tcs.2022.09.027},
  doi          = {10.1016/J.TCS.2022.09.027},
  timestamp    = {Tue, 08 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/GasconDE22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caldam/DondiP22,
  author       = {Riccardo Dondi and
                  Alexandru Popa},
  editor       = {Niranjan Balachandran and
                  R. Inkulu},
  title        = {Covering a Graph with Densest Subgraphs},
  booktitle    = {Algorithms and Discrete Applied Mathematics - 8th International Conference,
                  {CALDAM} 2022, Puducherry, India, February 10-12, 2022, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {13179},
  pages        = {152--163},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-030-95018-7\_13},
  doi          = {10.1007/978-3-030-95018-7\_13},
  timestamp    = {Mon, 31 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/caldam/DondiP22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complexnetworks/DondiGH22,
  author       = {Riccardo Dondi and
                  Pietro Hiram Guzzi and
                  Mohammad Mehdi Hosseinzadeh},
  editor       = {Hocine Cherifi and
                  Rosario Nunzio Mantegna and
                  Luis M. Rocha and
                  Chantal Cherifi and
                  Salvatore Miccich{\`{e}}},
  title        = {Integrating Temporal Graphs via Dual Networks: Dense Graph Discovery},
  booktitle    = {Complex Networks and Their Applications {XI} - Proceedings of The
                  Eleventh International Conference on Complex Networks and Their Applications:
                  {COMPLEX} {NETWORKS} 2022, Palermo, Italy, 8-10 November, 2022, Volume
                  2},
  series       = {Studies in Computational Intelligence},
  volume       = {1078},
  pages        = {523--535},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-21131-7\_41},
  doi          = {10.1007/978-3-031-21131-7\_41},
  timestamp    = {Tue, 16 Apr 2024 10:02:05 +0200},
  biburl       = {https://dblp.org/rec/conf/complexnetworks/DondiGH22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/DondiHZ22,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh and
                  Italo Zoppis},
  editor       = {Derek Groen and
                  Cl{\'{e}}lia de Mulatier and
                  Maciej Paszynski and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Dense Temporal Subgraphs in Protein-Protein Interaction Networks},
  booktitle    = {Computational Science - {ICCS} 2022 - 22nd International Conference,
                  London, UK, June 21-23, 2022, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {13351},
  pages        = {469--480},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-08754-7\_53},
  doi          = {10.1007/978-3-031-08754-7\_53},
  timestamp    = {Mon, 27 Jun 2022 17:21:54 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/DondiHZ22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictcs/Dondi22,
  author       = {Riccardo Dondi},
  editor       = {Ugo Dal Lago and
                  Daniele Gorla},
  title        = {Insights into the Complexity of Disentangling Temporal Graphs},
  booktitle    = {Proceedings of the 23rd Italian Conference on Theoretical Computer
                  Science, {ICTCS} 2022, Rome, Italy, September 7-9, 2022},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {3284},
  pages        = {1--13},
  publisher    = {CEUR-WS.org},
  year         = {2022},
  url          = {https://ceur-ws.org/Vol-3284/2973.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:17 +0100},
  biburl       = {https://dblp.org/rec/conf/ictcs/Dondi22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kesidt/Dondi22,
  author       = {Riccardo Dondi},
  editor       = {Ireneusz Czarnowski and
                  Robert J. Howlett and
                  Lakhmi C. Jain},
  title        = {Sequence Classification via {LCS}},
  booktitle    = {Intelligent Decision Technologies - Proceedings of the 14th {KES-IDT}
                  2022 Conference, Virtual Event / Rhodes, Greece, June 20-22, 2022},
  series       = {Smart Innovation, Systems and Technologies},
  volume       = {309},
  pages        = {77--86},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-981-19-3444-5\_7},
  doi          = {10.1007/978-981-19-3444-5\_7},
  timestamp    = {Thu, 25 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/kesidt/Dondi22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ans/DondiHG21,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh and
                  Pietro H. Guzzi},
  title        = {A novel algorithm for finding top-k weighted overlapping densest connected
                  subgraphs in dual networks},
  journal      = {Appl. Netw. Sci.},
  volume       = {6},
  number       = {1},
  pages        = {40},
  year         = {2021},
  url          = {https://doi.org/10.1007/s41109-021-00381-8},
  doi          = {10.1007/S41109-021-00381-8},
  timestamp    = {Tue, 13 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ans/DondiHG21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/BarilDH21,
  author       = {Ambroise Baril and
                  Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  title        = {Hardness and tractability of the \emph{{\(\gamma\)}}-Complete Subgraph
                  problem},
  journal      = {Inf. Process. Lett.},
  volume       = {169},
  pages        = {106105},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.ipl.2021.106105},
  doi          = {10.1016/J.IPL.2021.106105},
  timestamp    = {Fri, 07 May 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ipl/BarilDH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/DondiHMZ21,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {Top-k overlapping densest subgraphs: approximation algorithms and
                  computational complexity},
  journal      = {J. Comb. Optim.},
  volume       = {41},
  number       = {1},
  pages        = {80--104},
  year         = {2021},
  url          = {https://doi.org/10.1007/s10878-020-00664-3},
  doi          = {10.1007/S10878-020-00664-3},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jco/DondiHMZ21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sncs/DondiH21,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  title        = {Dense Sub-networks Discovery in Temporal Networks},
  journal      = {{SN} Comput. Sci.},
  volume       = {2},
  number       = {3},
  pages        = {158},
  year         = {2021},
  url          = {https://doi.org/10.1007/s42979-021-00593-w},
  doi          = {10.1007/S42979-021-00593-W},
  timestamp    = {Fri, 14 May 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/sncs/DondiH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complexnetworks/DondiH21,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  editor       = {Rosa Mar{\'{\i}}a Benito and
                  Chantal Cherifi and
                  Hocine Cherifi and
                  Esteban Moro and
                  Luis M. Rocha and
                  Marta Sales{-}Pardo},
  title        = {Finding Colorful Paths in Temporal Graphs},
  booktitle    = {Complex Networks {\&} Their Applications {X} - Volume 1, Proceedings
                  of the Tenth International Conference on Complex Networks and Their
                  Applications {COMPLEX} {NETWORKS} 2021, Madrid, Spain, November 30
                  - December 2, 2021},
  series       = {Studies in Computational Intelligence},
  volume       = {1015},
  pages        = {553--565},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-93409-5\_46},
  doi          = {10.1007/978-3-030-93409-5\_46},
  timestamp    = {Mon, 26 Jun 2023 20:46:27 +0200},
  biburl       = {https://dblp.org/rec/conf/complexnetworks/DondiH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/DondiS21,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  editor       = {Pawel Gawrychowski and
                  Tatiana Starikovskaya},
  title        = {The Longest Run Subsequence Problem: Further Complexity Results},
  booktitle    = {32nd Annual Symposium on Combinatorial Pattern Matching, {CPM} 2021,
                  July 5-7, 2021, Wroc{\l}aw, Poland},
  series       = {LIPIcs},
  volume       = {191},
  pages        = {14:1--14:15},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2021},
  url          = {https://doi.org/10.4230/LIPIcs.CPM.2021.14},
  doi          = {10.4230/LIPICS.CPM.2021.14},
  timestamp    = {Wed, 21 Aug 2024 22:46:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cpm/DondiS21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/GasconDE21,
  author       = {Mathieu Gascon and
                  Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  editor       = {Paola Flocchini and
                  Lucia Moura},
  title        = {Complexity and Algorithms for MUL-Tree Pruning},
  booktitle    = {Combinatorial Algorithms - 32nd International Workshop, {IWOCA} 2021,
                  Ottawa, ON, Canada, July 5-7, 2021, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12757},
  pages        = {324--339},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-79987-8\_23},
  doi          = {10.1007/978-3-030-79987-8\_23},
  timestamp    = {Mon, 12 Jul 2021 09:19:27 +0200},
  biburl       = {https://dblp.org/rec/conf/iwoca/GasconDE21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/sofsem/2021,
  editor       = {Tom{\'{a}}s Bures and
                  Riccardo Dondi and
                  Johann Gamper and
                  Giovanna Guerrini and
                  Tomasz Jurdzinski and
                  Claus Pahl and
                  Florian Sikora and
                  Prudence W. H. Wong},
  title        = {{SOFSEM} 2021: Theory and Practice of Computer Science - 47th International
                  Conference on Current Trends in Theory and Practice of Computer Science,
                  {SOFSEM} 2021, Bolzano-Bozen, Italy, January 25-29, 2021, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12607},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-67731-2},
  doi          = {10.1007/978-3-030-67731-2},
  isbn         = {978-3-030-67730-5},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sofsem/2021.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2109-01392,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  title        = {Finding Colorful Paths in Temporal Graphs},
  journal      = {CoRR},
  volume       = {abs/2109.01392},
  year         = {2021},
  url          = {https://arxiv.org/abs/2109.01392},
  eprinttype    = {arXiv},
  eprint       = {2109.01392},
  timestamp    = {Mon, 20 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2109-01392.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/complexnetworks/DondiGH20,
  author       = {Riccardo Dondi and
                  Pietro Hiram Guzzi and
                  Mohammad Mehdi Hosseinzadeh},
  editor       = {Rosa M. Benito and
                  Chantal Cherifi and
                  Hocine Cherifi and
                  Esteban Moro and
                  Luis Mateus Rocha and
                  Marta Sales{-}Pardo},
  title        = {Top-k Connected Overlapping Densest Subgraphs in Dual Networks},
  booktitle    = {Complex Networks {\&} Their Applications {IX} - Volume 2, Proceedings
                  of the Ninth International Conference on Complex Networks and Their
                  Applications, {COMPLEX} {NETWORKS} 2020, 1-3 December 2020, Madrid,
                  Spain},
  series       = {Studies in Computational Intelligence},
  volume       = {944},
  pages        = {585--596},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-65351-4\_47},
  doi          = {10.1007/978-3-030-65351-4\_47},
  timestamp    = {Sun, 02 Oct 2022 15:57:51 +0200},
  biburl       = {https://dblp.org/rec/conf/complexnetworks/DondiGH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kes/CastelliDH20,
  author       = {Mauro Castelli and
                  Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh},
  editor       = {Matteo Cristani and
                  Carlos Toro and
                  Cecilia Zanni{-}Merk and
                  Robert J. Howlett and
                  Lakhmi C. Jain},
  title        = {Genetic Algorithms for Finding Episodes in Temporal Networks},
  booktitle    = {Knowledge-Based and Intelligent Information {\&} Engineering Systems:
                  Proceedings of the 24th International Conference KES-2020, Virtual
                  Event, 16-18 September 2020},
  series       = {Procedia Computer Science},
  volume       = {176},
  pages        = {215--224},
  publisher    = {Elsevier},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.procs.2020.08.023},
  doi          = {10.1016/J.PROCS.2020.08.023},
  timestamp    = {Thu, 05 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/kes/CastelliDH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lata/DondiMZ20,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Alberto Leporati and
                  Carlos Mart{\'{\i}}n{-}Vide and
                  Dana Shapira and
                  Claudio Zandron},
  title        = {Complexity Issues of String to Graph Approximate Matching},
  booktitle    = {Language and Automata Theory and Applications - 14th International
                  Conference, {LATA} 2020, Milan, Italy, March 4-6, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12038},
  pages        = {248--259},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-40608-0\_17},
  doi          = {10.1007/978-3-030-40608-0\_17},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/lata/DondiMZ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/sofsem/2020,
  editor       = {Alexander Chatzigeorgiou and
                  Riccardo Dondi and
                  Herodotos Herodotou and
                  Christos A. Kapoutsis and
                  Yannis Manolopoulos and
                  George A. Papadopoulos and
                  Florian Sikora},
  title        = {{SOFSEM} 2020: Theory and Practice of Computer Science - 46th International
                  Conference on Current Trends in Theory and Practice of Informatics,
                  {SOFSEM} 2020, Limassol, Cyprus, January 20-24, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12011},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-38919-2},
  doi          = {10.1007/978-3-030-38919-2},
  isbn         = {978-3-030-38918-5},
  timestamp    = {Tue, 21 Jan 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/sofsem/2020.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2001-01961,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {Complexity Issues of String to Graph Approximate Matching},
  journal      = {CoRR},
  volume       = {abs/2001.01961},
  year         = {2020},
  url          = {http://arxiv.org/abs/2001.01961},
  eprinttype    = {arXiv},
  eprint       = {2001.01961},
  timestamp    = {Mon, 13 Jan 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2001-01961.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-07695,
  author       = {Riccardo Dondi and
                  Danny Hermelin},
  title        = {Computing the k Densest Subgraphs of a Graph},
  journal      = {CoRR},
  volume       = {abs/2002.07695},
  year         = {2020},
  url          = {https://arxiv.org/abs/2002.07695},
  eprinttype    = {arXiv},
  eprint       = {2002.07695},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2002-07695.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-01573,
  author       = {Riccardo Dondi and
                  Pietro Hiram Guzzi and
                  Mohammad Mehdi Hosseinzadeh},
  title        = {Top-k Connected Overlapping Densest Subgraphs in Dual Networks},
  journal      = {CoRR},
  volume       = {abs/2008.01573},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.01573},
  eprinttype    = {arXiv},
  eprint       = {2008.01573},
  timestamp    = {Fri, 07 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-01573.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2011-08119,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  title        = {The Longest Run Subsequence Problem: Further Complexity Results},
  journal      = {CoRR},
  volume       = {abs/2011.08119},
  year         = {2020},
  url          = {https://arxiv.org/abs/2011.08119},
  eprinttype    = {arXiv},
  eprint       = {2011.08119},
  timestamp    = {Wed, 18 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2011-08119.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DondiLS19,
  author       = {Riccardo Dondi and
                  Manuel Lafond and
                  C{\'{e}}line Scornavacca},
  title        = {Reconciling multiple genes trees via segmental duplications and losses},
  journal      = {Algorithms Mol. Biol.},
  volume       = {14},
  number       = {1},
  pages        = {7:1--7:19},
  year         = {2019},
  url          = {https://doi.org/10.1186/s13015-019-0139-6},
  doi          = {10.1186/S13015-019-0139-6},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/almob/DondiLS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgaa/DondiMSZ19,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Florian Sikora and
                  Italo Zoppis},
  title        = {Covering a Graph with Clubs},
  journal      = {J. Graph Algorithms Appl.},
  volume       = {23},
  number       = {2},
  pages        = {271--292},
  year         = {2019},
  url          = {https://doi.org/10.7155/jgaa.00491},
  doi          = {10.7155/JGAA.00491},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jgaa/DondiMSZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DondiMZ19,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {On the tractability of finding disjoint clubs in a network},
  journal      = {Theor. Comput. Sci.},
  volume       = {777},
  pages        = {243--251},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.tcs.2019.03.045},
  doi          = {10.1016/J.TCS.2019.03.045},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/DondiMZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/CastelliDMZ19,
  author       = {Mauro Castelli and
                  Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {Comparing incomplete sequences via longest common subsequence},
  journal      = {Theor. Comput. Sci.},
  volume       = {796},
  pages        = {272--285},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.tcs.2019.09.022},
  doi          = {10.1016/J.TCS.2019.09.022},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/CastelliDMZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csedu/ZoppisDMMME19,
  author       = {Italo Zoppis and
                  Riccardo Dondi and
                  Sara Manzoni and
                  Giancarlo Mauri and
                  Luca Marconi and
                  Francesco Epifania},
  editor       = {H. Chad Lane and
                  Susan Zvacek and
                  James Uhomoibhi},
  title        = {Optimized Social Explanation for Educational Platforms},
  booktitle    = {Proceedings of the 11th International Conference on Computer Supported
                  Education, {CSEDU} 2019, Heraklion, Crete, Greece, May 2-4, 2019,
                  Volume 1},
  pages        = {85--91},
  publisher    = {SciTePress},
  year         = {2019},
  url          = {https://doi.org/10.5220/0007749500850091},
  doi          = {10.5220/0007749500850091},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csedu/ZoppisDMMME19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fct/DondiL19,
  author       = {Riccardo Dondi and
                  Manuel Lafond},
  editor       = {Leszek Antoni Gasieniec and
                  Jesper Jansson and
                  Christos Levcopoulos},
  title        = {On the Tractability of Covering a Graph with 2-Clubs},
  booktitle    = {Fundamentals of Computation Theory - 22nd International Symposium,
                  {FCT} 2019, Copenhagen, Denmark, August 12-14, 2019, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11651},
  pages        = {243--257},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-25027-0\_17},
  doi          = {10.1007/978-3-030-25027-0\_17},
  timestamp    = {Tue, 17 May 2022 11:54:28 +0200},
  biburl       = {https://dblp.org/rec/conf/fct/DondiL19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/CastelliDMMZ19,
  author       = {Mauro Castelli and
                  Riccardo Dondi and
                  Sara Manzoni and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Jo{\~{a}}o M. F. Rodrigues and
                  Pedro J. S. Cardoso and
                  J{\^{a}}nio M. Monteiro and
                  Roberto Lam and
                  Valeria V. Krzhizhanovskaya and
                  Michael Harold Lees and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Top k 2-Clubs in a Network: {A} Genetic Algorithm},
  booktitle    = {Computational Science - {ICCS} 2019 - 19th International Conference,
                  Faro, Portugal, June 12-14, 2019, Proceedings, Part {V}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11540},
  pages        = {656--663},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-22750-0\_63},
  doi          = {10.1007/978-3-030-22750-0\_63},
  timestamp    = {Tue, 07 May 2024 20:07:42 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/CastelliDMMZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictcs/DondiHMZ19,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Alessandra Cherubini and
                  Nicoletta Sabadini and
                  Simone Tini},
  title        = {Top-k Overlapping Densest Subgraphs: Approximation and Complexity},
  booktitle    = {Proceedings of the 20th Italian Conference on Theoretical Computer
                  Science, {ICTCS} 2019, Como, Italy, September 9-11, 2019},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2504},
  pages        = {110--121},
  publisher    = {CEUR-WS.org},
  year         = {2019},
  url          = {https://ceur-ws.org/Vol-2504/paper14.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:17 +0100},
  biburl       = {https://dblp.org/rec/conf/ictcs/DondiHMZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/ZoppisMD19,
  author       = {Italo Zoppis and
                  Giancarlo Mauri and
                  Riccardo Dondi},
  editor       = {Shoba Ranganathan and
                  Michael Gribskov and
                  Kenta Nakai and
                  Christian Sch{\"{o}}nbach},
  title        = {Kernel Machines: Introduction},
  booktitle    = {Encyclopedia of Bioinformatics and Computational Biology - Volume
                  1},
  pages        = {495--502},
  publisher    = {Elsevier},
  year         = {2019},
  url          = {https://doi.org/10.1016/b978-0-12-809633-8.20341-5},
  doi          = {10.1016/B978-0-12-809633-8.20341-5},
  timestamp    = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/reference/bioinf/ZoppisMD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/ZoppisMD19a,
  author       = {Italo Zoppis and
                  Giancarlo Mauri and
                  Riccardo Dondi},
  editor       = {Shoba Ranganathan and
                  Michael Gribskov and
                  Kenta Nakai and
                  Christian Sch{\"{o}}nbach},
  title        = {Kernel Methods: Support Vector Machines},
  booktitle    = {Encyclopedia of Bioinformatics and Computational Biology - Volume
                  1},
  pages        = {503--510},
  publisher    = {Elsevier},
  year         = {2019},
  url          = {https://doi.org/10.1016/b978-0-12-809633-8.20342-7},
  doi          = {10.1016/B978-0-12-809633-8.20342-7},
  timestamp    = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/reference/bioinf/ZoppisMD19a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/ZoppisMD19b,
  author       = {Italo Zoppis and
                  Giancarlo Mauri and
                  Riccardo Dondi},
  editor       = {Shoba Ranganathan and
                  Michael Gribskov and
                  Kenta Nakai and
                  Christian Sch{\"{o}}nbach},
  title        = {Kernel Machines: Applications},
  booktitle    = {Encyclopedia of Bioinformatics and Computational Biology - Volume
                  1},
  pages        = {511--518},
  publisher    = {Elsevier},
  year         = {2019},
  url          = {https://doi.org/10.1016/b978-0-12-809633-8.20343-9},
  doi          = {10.1016/B978-0-12-809633-8.20343-9},
  timestamp    = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/reference/bioinf/ZoppisMD19b.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/DondiMZ19,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Shoba Ranganathan and
                  Michael Gribskov and
                  Kenta Nakai and
                  Christian Sch{\"{o}}nbach},
  title        = {Graph Isomorphism},
  booktitle    = {Encyclopedia of Bioinformatics and Computational Biology - Volume
                  1},
  pages        = {933--939},
  publisher    = {Elsevier},
  year         = {2019},
  url          = {https://doi.org/10.1016/b978-0-12-809633-8.20423-8},
  doi          = {10.1016/B978-0-12-809633-8.20423-8},
  timestamp    = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/reference/bioinf/DondiMZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/DondiMZ19a,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Shoba Ranganathan and
                  Michael Gribskov and
                  Kenta Nakai and
                  Christian Sch{\"{o}}nbach},
  title        = {Graph Algorithms},
  booktitle    = {Encyclopedia of Bioinformatics and Computational Biology - Volume
                  1},
  pages        = {940--949},
  publisher    = {Elsevier},
  year         = {2019},
  url          = {https://doi.org/10.1016/b978-0-12-809633-8.20424-x},
  doi          = {10.1016/B978-0-12-809633-8.20424-X},
  timestamp    = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/reference/bioinf/DondiMZ19a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computers/AgapitoCCDZ18,
  author       = {Giuseppe Agapito and
                  Mario Cannataro and
                  Mauro Castelli and
                  Riccardo Dondi and
                  Italo Zoppis},
  title        = {Editorial of the Special Issue of the 10th Workshop on Biomedical
                  and Bioinformatics Challenges for Computer Science - {BBC} 2017},
  journal      = {Comput.},
  volume       = {7},
  number       = {1},
  pages        = {17},
  year         = {2018},
  url          = {https://doi.org/10.3390/computers7010017},
  doi          = {10.3390/COMPUTERS7010017},
  timestamp    = {Sun, 04 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/computers/AgapitoCCDZ18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/DondiS18,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  title        = {Finding disjoint paths on edge-colored graphs: more tractability results},
  journal      = {J. Comb. Optim.},
  volume       = {36},
  number       = {4},
  pages        = {1315--1332},
  year         = {2018},
  url          = {https://doi.org/10.1007/s10878-017-0238-6},
  doi          = {10.1007/S10878-017-0238-6},
  timestamp    = {Wed, 03 Oct 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jco/DondiS18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DondiFM18,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  Giancarlo Mauri},
  title        = {Editorial},
  journal      = {Theor. Comput. Sci.},
  volume       = {717},
  pages        = {1},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.tcs.2018.02.016},
  doi          = {10.1016/J.TCS.2018.02.016},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/DondiFM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DondiS18,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  title        = {Parameterized complexity and approximation issues for the colorful
                  components problems},
  journal      = {Theor. Comput. Sci.},
  volume       = {739},
  pages        = {1--12},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.tcs.2018.04.044},
  doi          = {10.1016/J.TCS.2018.04.044},
  timestamp    = {Tue, 10 Jul 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/DondiS18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aiia/ZoppisDMM18,
  author       = {Italo Zoppis and
                  Riccardo Dondi and
                  Sara Manzoni and
                  Giancarlo Mauri},
  editor       = {Stefania Bandini and
                  Gabriella Cortellessa and
                  Andrea Gorrini and
                  Filippo Palumbo},
  title        = {Patient Engagement: Theoretical and Heuristic Approaches for Supporting
                  the Clinical Practice},
  booktitle    = {Proceedings of the Fourth Italian Workshop on Artificial Intelligence
                  for Ambient Assisted Living 2018 co-located with 17th International
                  Conference of the Italian Association for Artificial Intelligence,
                  AI*AAL@AI*IA 2018, Trento, Italy, November 20th and 23rd, 2018},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2333},
  pages        = {51--66},
  publisher    = {CEUR-WS.org},
  year         = {2018},
  url          = {https://ceur-ws.org/Vol-2333/paper4.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aiia/ZoppisDMM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ZoppisDSCSM18,
  author       = {Italo Zoppis and
                  Riccardo Dondi and
                  Eugenio Santoro and
                  Gianluca Castelnuovo and
                  Francesco Sicurello and
                  Giancarlo Mauri},
  editor       = {Reyer Zwiggelaar and
                  Hugo Gamboa and
                  Ana L. N. Fred and
                  Sergi Berm{\'{u}}dez i Badia},
  title        = {Optimizing Social Interaction - {A} Computational Approach to Support
                  Patient Engagement},
  booktitle    = {Proceedings of the 11th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2018) - Volume 5:
                  HEALTHINF, Funchal, Madeira, Portugal, January 19-21, 2018},
  pages        = {651--657},
  publisher    = {SciTePress},
  year         = {2018},
  url          = {https://doi.org/10.5220/0006730606510657},
  doi          = {10.5220/0006730606510657},
  timestamp    = {Sun, 04 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/ZoppisDSCSM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/DondiMSZ18,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Florian Sikora and
                  Italo Zoppis},
  editor       = {Costas S. Iliopoulos and
                  Hon Wai Leong and
                  Wing{-}Kin Sung},
  title        = {Covering with Clubs: Complexity and Approximability},
  booktitle    = {Combinatorial Algorithms - 29th International Workshop, {IWOCA} 2018,
                  Singapore, July 16-19, 2018, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10979},
  pages        = {153--164},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-319-94667-2\_13},
  doi          = {10.1007/978-3-319-94667-2\_13},
  timestamp    = {Mon, 16 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iwoca/DondiMSZ18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pdp/ZoppisDCBM18,
  author       = {Italo Zoppis and
                  Riccardo Dondi and
                  Davide Coppetti and
                  Alessandro Beltramo and
                  Giancarlo Mauri},
  editor       = {Ivan Merelli and
                  Pietro Li{\`{o}} and
                  Igor V. Kotenko},
  title        = {Distributed Heuristics for Optimizing Cohesive Groups: {A} Support
                  for Clinical Patient Engagement in Social Network Analysis},
  booktitle    = {26th Euromicro International Conference on Parallel, Distributed and
                  Network-based Processing, {PDP} 2018, Cambridge, United Kingdom, March
                  21-23, 2018},
  pages        = {259--266},
  publisher    = {{IEEE} Computer Society},
  year         = {2018},
  url          = {https://doi.org/10.1109/PDP2018.2018.00044},
  doi          = {10.1109/PDP2018.2018.00044},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/pdp/ZoppisDCBM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DondiLS18,
  author       = {Riccardo Dondi and
                  Manuel Lafond and
                  C{\'{e}}line Scornavacca},
  editor       = {Laxmi Parida and
                  Esko Ukkonen},
  title        = {Reconciling Multiple Genes Trees via Segmental Duplications and Losses},
  booktitle    = {18th International Workshop on Algorithms in Bioinformatics, {WABI}
                  2018, August 20-22, 2018, Helsinki, Finland},
  series       = {LIPIcs},
  volume       = {113},
  pages        = {5:1--5:16},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2018},
  url          = {https://doi.org/10.4230/LIPIcs.WABI.2018.5},
  doi          = {10.4230/LIPICS.WABI.2018.5},
  timestamp    = {Tue, 11 Feb 2020 15:52:14 +0100},
  biburl       = {https://dblp.org/rec/conf/wabi/DondiLS18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1806-01119,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Florian Sikora and
                  Italo Zoppis},
  title        = {Covering with Clubs: Complexity and Approximability},
  journal      = {CoRR},
  volume       = {abs/1806.01119},
  year         = {2018},
  url          = {http://arxiv.org/abs/1806.01119},
  eprinttype    = {arXiv},
  eprint       = {1806.01119},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1806-01119.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1806-03988,
  author       = {Riccardo Dondi and
                  Manuel Lafond and
                  C{\'{e}}line Scornavacca},
  title        = {Reconciling Multiple Genes Trees via Segmental Duplications and Losses},
  journal      = {CoRR},
  volume       = {abs/1806.03988},
  year         = {2018},
  url          = {http://arxiv.org/abs/1806.03988},
  eprinttype    = {arXiv},
  eprint       = {1806.03988},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1806-03988.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1809-02434,
  author       = {Riccardo Dondi and
                  Mohammad Mehdi Hosseinzadeh and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {Top-k Overlapping Densest Subgraphs: Approximation and Complexity},
  journal      = {CoRR},
  volume       = {abs/1809.02434},
  year         = {2018},
  url          = {http://arxiv.org/abs/1809.02434},
  eprinttype    = {arXiv},
  eprint       = {1809.02434},
  timestamp    = {Fri, 05 Oct 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1809-02434.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/DondiLE17,
  author       = {Riccardo Dondi and
                  Manuel Lafond and
                  Nadia El{-}Mabrouk},
  title        = {Approximating the correction of weighted and unweighted orthology
                  and paralogy relations},
  journal      = {Algorithms Mol. Biol.},
  volume       = {12},
  number       = {1},
  pages        = {4:1--4:15},
  year         = {2017},
  url          = {https://doi.org/10.1186/s13015-017-0096-x},
  doi          = {10.1186/S13015-017-0096-X},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/almob/DondiLE17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/CastelliDMZ17,
  author       = {Mauro Castelli and
                  Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Juha K{\"{a}}rkk{\"{a}}inen and
                  Jakub Radoszewski and
                  Wojciech Rytter},
  title        = {The Longest Filled Common Subsequence Problem},
  booktitle    = {28th Annual Symposium on Combinatorial Pattern Matching, {CPM} 2017,
                  July 4-6, 2017, Warsaw, Poland},
  series       = {LIPIcs},
  volume       = {78},
  pages        = {14:1--14:13},
  publisher    = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
  year         = {2017},
  url          = {https://doi.org/10.4230/LIPIcs.CPM.2017.14},
  doi          = {10.4230/LIPICS.CPM.2017.14},
  timestamp    = {Tue, 11 Feb 2020 15:52:14 +0100},
  biburl       = {https://dblp.org/rec/conf/cpm/CastelliDMZ17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/AgapitoCCDZ17,
  author       = {Giuseppe Agapito and
                  Mario Cannataro and
                  Mauro Castelli and
                  Riccardo Dondi and
                  Italo Zoppis},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {10\({}^{\mbox{th}}\) Workshop on Biomedical and Bioinformatics Challenges
                  for Computer Science - {BBC2017}},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {1113--1114},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.279},
  doi          = {10.1016/J.PROCS.2017.05.279},
  timestamp    = {Thu, 08 Jul 2021 16:04:01 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/AgapitoCCDZ17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/DondiMZ17,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Petros Koumoutsakos and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Orthology Correction for Gene Tree Reconstruction: Theoretical and
                  Experimental Results},
  booktitle    = {International Conference on Computational Science, {ICCS} 2017, 12-14
                  June 2017, Zurich, Switzerland},
  series       = {Procedia Computer Science},
  volume       = {108},
  pages        = {1115--1124},
  publisher    = {Elsevier},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.procs.2017.05.047},
  doi          = {10.1016/J.PROCS.2017.05.047},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/iccS/DondiMZ17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/LafondDE16,
  author       = {Manuel Lafond and
                  Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  title        = {The link between orthology relations and gene trees: a correction
                  perspective},
  journal      = {Algorithms Mol. Biol.},
  volume       = {11},
  pages        = {4},
  year         = {2016},
  url          = {https://doi.org/10.1186/s13015-016-0067-7},
  doi          = {10.1186/S13015-016-0067-7},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/almob/LafondDE16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PirolaZDKPB16,
  author       = {Yuri Pirola and
                  Simone Zaccaria and
                  Riccardo Dondi and
                  Gunnar W. Klau and
                  Nadia Pisanti and
                  Paola Bonizzoni},
  title        = {HapCol: accurate and memory-efficient haplotype assembly from long
                  reads},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {11},
  pages        = {1610--1617},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btv495},
  doi          = {10.1093/BIOINFORMATICS/BTV495},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PirolaZDKPB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BonizzoniDKPPZ16,
  author       = {Paola Bonizzoni and
                  Riccardo Dondi and
                  Gunnar W. Klau and
                  Yuri Pirola and
                  Nadia Pisanti and
                  Simone Zaccaria},
  title        = {On the Minimum Error Correction Problem for Haplotype Assembly in
                  Diploid and Polyploid Genomes},
  journal      = {J. Comput. Biol.},
  volume       = {23},
  number       = {9},
  pages        = {718--736},
  year         = {2016},
  url          = {https://doi.org/10.1089/cmb.2015.0220},
  doi          = {10.1089/CMB.2015.0220},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/BonizzoniDKPPZ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/0001CD16,
  author       = {Stefano Beretta and
                  Mauro Castelli and
                  Riccardo Dondi},
  title        = {Parameterized tractability of the maximum-duo preservation string
                  mapping problem},
  journal      = {Theor. Comput. Sci.},
  volume       = {646},
  pages        = {16--25},
  year         = {2016},
  url          = {https://doi.org/10.1016/j.tcs.2016.07.011},
  doi          = {10.1016/J.TCS.2016.07.011},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/0001CD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BerettaCD16,
  author       = {Stefano Beretta and
                  Mauro Castelli and
                  Riccardo Dondi},
  title        = {Corrigendum to "Parameterized tractability of the maximum-duo
                  preservation string mapping problem" [Theoret. Comput. Sci. 646(2016)
                  16-25]},
  journal      = {Theor. Comput. Sci.},
  volume       = {653},
  pages        = {108--110},
  year         = {2016},
  url          = {https://doi.org/10.1016/j.tcs.2016.09.015},
  doi          = {10.1016/J.TCS.2016.09.015},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/BerettaCD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cie/DondiS16,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  editor       = {Arnold Beckmann and
                  Laurent Bienvenu and
                  Natasa Jonoska},
  title        = {Parameterized Complexity and Approximation Issues for the Colorful
                  Components Problems},
  booktitle    = {Pursuit of the Universal - 12th Conference on Computability in Europe,
                  CiE 2016, Paris, France, June 27 - July 1, 2016, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9709},
  pages        = {261--270},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-40189-8\_27},
  doi          = {10.1007/978-3-319-40189-8\_27},
  timestamp    = {Tue, 14 May 2019 10:00:41 +0200},
  biburl       = {https://dblp.org/rec/conf/cie/DondiS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cocoa/DondiS16,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  editor       = {T.{-}H. Hubert Chan and
                  Minming Li and
                  Lusheng Wang},
  title        = {Finding Disjoint Paths on Edge-Colored Graphs: {A} Multivariate Complexity
                  Analysis},
  booktitle    = {Combinatorial Optimization and Applications - 10th International Conference,
                  {COCOA} 2016, Hong Kong, China, December 16-18, 2016, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10043},
  pages        = {113--127},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-48749-6\_9},
  doi          = {10.1007/978-3-319-48749-6\_9},
  timestamp    = {Tue, 14 May 2019 10:00:53 +0200},
  biburl       = {https://dblp.org/rec/conf/cocoa/DondiS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kesidt/DondiMZ16,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Ireneusz Czarnowski and
                  Alfonso Mateos Caballero and
                  Robert J. Howlett and
                  Lakhmi C. Jain},
  title        = {Clique Editing to Support Case Versus Control Discrimination},
  booktitle    = {Intelligent Decision Technologies 2016 - Proceedings of the 8th {KES}
                  International Conference on Intelligent Decision Technologies {(KES-IDT}
                  2016) - Part I, Puerto de la Cruz, Spain, 15-17 June, 2016},
  series       = {Smart Innovation, Systems and Technologies},
  volume       = {56},
  pages        = {27--36},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-39630-9\_3},
  doi          = {10.1007/978-3-319-39630-9\_3},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/kesidt/DondiMZ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DondiEL16,
  author       = {Riccardo Dondi and
                  Nadia El{-}Mabrouk and
                  Manuel Lafond},
  editor       = {Martin C. Frith and
                  Christian N{\o}rgaard Storm Pedersen},
  title        = {Correction of Weighted Orthology and Paralogy Relations - Complexity
                  and Algorithmic Results},
  booktitle    = {Algorithms in Bioinformatics - 16th International Workshop, {WABI}
                  2016, Aarhus, Denmark, August 22-24, 2016. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9838},
  pages        = {121--136},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-43681-4\_10},
  doi          = {10.1007/978-3-319-43681-4\_10},
  timestamp    = {Tue, 14 May 2019 10:00:40 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/DondiEL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/aaim/2016,
  editor       = {Riccardo Dondi and
                  Guillaume Fertin and
                  Giancarlo Mauri},
  title        = {Algorithmic Aspects in Information and Management - 11th International
                  Conference, {AAIM} 2016, Bergamo, Italy, July 18-20, 2016, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9778},
  publisher    = {Springer},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-41168-2},
  doi          = {10.1007/978-3-319-41168-2},
  isbn         = {978-3-319-41167-5},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/aaim/2016.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/algo/DondiP16,
  author       = {Riccardo Dondi and
                  Yuri Pirola},
  title        = {Beyond Evolutionary Trees},
  booktitle    = {Encyclopedia of Algorithms},
  pages        = {183--189},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-1-4939-2864-4\_599},
  doi          = {10.1007/978-1-4939-2864-4\_599},
  timestamp    = {Wed, 12 Jul 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/reference/algo/DondiP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/DondiS16,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  title        = {Parameterized Complexity and Approximation Issues for the Colorful
                  Components Problems},
  journal      = {CoRR},
  volume       = {abs/1605.03071},
  year         = {2016},
  url          = {http://arxiv.org/abs/1605.03071},
  eprinttype    = {arXiv},
  eprint       = {1605.03071},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/DondiS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/DondiS16a,
  author       = {Riccardo Dondi and
                  Florian Sikora},
  title        = {Finding Disjoint Paths on Edge-Colored Graphs: {A} Multivariate Complexity
                  Analysis},
  journal      = {CoRR},
  volume       = {abs/1609.04951},
  year         = {2016},
  url          = {http://arxiv.org/abs/1609.04951},
  eprinttype    = {arXiv},
  eprint       = {1609.04951},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/DondiS16a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/BonizzoniDMZ15,
  author       = {Paola Bonizzoni and
                  Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {Restricted and Swap Common Superstring: {A} Multivariate Algorithmic
                  Perspective},
  journal      = {Algorithmica},
  volume       = {72},
  number       = {4},
  pages        = {914--939},
  year         = {2015},
  url          = {https://doi.org/10.1007/s00453-014-9882-8},
  doi          = {10.1007/S00453-014-9882-8},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithmica/BonizzoniDMZ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cj/BeerenwinkelBBD15,
  author       = {Niko Beerenwinkel and
                  Stefano Beretta and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Covering Pairs in Directed Acyclic Graphs},
  journal      = {Comput. J.},
  volume       = {58},
  number       = {7},
  pages        = {1673--1686},
  year         = {2015},
  url          = {https://doi.org/10.1093/comjnl/bxu116},
  doi          = {10.1093/COMJNL/BXU116},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cj/BeerenwinkelBBD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcst/BatiniBCDPS15,
  author       = {Carlo Batini and
                  Paola Bonizzoni and
                  Marco Comerio and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Francesco Salandra},
  title        = {A Clustering Algorithm for Planning the Integration Process of a Large
                  Number of Conceptual Schemas},
  journal      = {J. Comput. Sci. Technol.},
  volume       = {30},
  number       = {1},
  pages        = {214--224},
  year         = {2015},
  url          = {https://doi.org/10.1007/s11390-015-1514-5},
  doi          = {10.1007/S11390-015-1514-5},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcst/BatiniBCDPS15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/BerettaCD15,
  author       = {Stefano Beretta and
                  Mauro Castelli and
                  Riccardo Dondi},
  title        = {Correcting gene tree by removal and modification: Tractability and
                  approximability},
  journal      = {J. Discrete Algorithms},
  volume       = {33},
  pages        = {115--129},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jda.2015.03.005},
  doi          = {10.1016/J.JDA.2015.03.005},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jda/BerettaCD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BulteauCD15,
  author       = {Laurent Bulteau and
                  Anna Paola Carrieri and
                  Riccardo Dondi},
  title        = {Fixed-parameter algorithms for scaffold filling},
  journal      = {Theor. Comput. Sci.},
  volume       = {568},
  pages        = {72--83},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.tcs.2014.12.005},
  doi          = {10.1016/J.TCS.2014.12.005},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/BulteauCD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/BonizzoniDKPPZ15,
  author       = {Paola Bonizzoni and
                  Riccardo Dondi and
                  Gunnar W. Klau and
                  Yuri Pirola and
                  Nadia Pisanti and
                  Simone Zaccaria},
  editor       = {Ferdinando Cicalese and
                  Ely Porat and
                  Ugo Vaccaro},
  title        = {On the Fixed Parameter Tractability and Approximability of the Minimum
                  Error Correction Problem},
  booktitle    = {Combinatorial Pattern Matching - 26th Annual Symposium, {CPM} 2015,
                  Ischia Island, Italy, June 29 - July 1, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9133},
  pages        = {100--113},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-19929-0\_9},
  doi          = {10.1007/978-3-319-19929-0\_9},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cpm/BonizzoniDKPPZ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BerettaCD15,
  author       = {Stefano Beretta and
                  Mario Cannataro and
                  Riccardo Dondi},
  editor       = {Slawomir Koziel and
                  Leifur {\TH}. Leifsson and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {8\({}^{\mbox{th}}\) Workshop on Biomedical and Bioinformatics Challenges
                  for Computer Science - {BBC2015}},
  booktitle    = {Proceedings of the International Conference on Computational Science,
                  {ICCS} 2015, Computational Science at the Gates of Nature, Reykjav{\'{\i}}k,
                  Iceland, 1-3 June, 2015, 2014},
  series       = {Procedia Computer Science},
  volume       = {51},
  pages        = {680--682},
  publisher    = {Elsevier},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.procs.2015.05.184},
  doi          = {10.1016/J.PROCS.2015.05.184},
  timestamp    = {Thu, 08 Jul 2021 16:04:01 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/BerettaCD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/ZoppisDBGCMM15,
  author       = {Italo Zoppis and
                  Riccardo Dondi and
                  Massimiliano Borsani and
                  Erica Gianazza and
                  Clizia Chinello and
                  Fulvio Magni and
                  Giancarlo Mauri},
  editor       = {Slawomir Koziel and
                  Leifur {\TH}. Leifsson and
                  Michael Lees and
                  Valeria V. Krzhizhanovskaya and
                  Jack J. Dongarra and
                  Peter M. A. Sloot},
  title        = {Robust Conclusions in Mass Spectrometry Analysis},
  booktitle    = {Proceedings of the International Conference on Computational Science,
                  {ICCS} 2015, Computational Science at the Gates of Nature, Reykjav{\'{\i}}k,
                  Iceland, 1-3 June, 2015, 2014},
  series       = {Procedia Computer Science},
  volume       = {51},
  pages        = {683--692},
  publisher    = {Elsevier},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.procs.2015.05.185},
  doi          = {10.1016/J.PROCS.2015.05.185},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/ZoppisDBGCMM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/entcs/BerettaD16,
  author       = {Stefano Beretta and
                  Riccardo Dondi},
  editor       = {Pierluigi Crescenzi and
                  Michele Loreti},
  title        = {Correcting Gene Trees by Leaf Insertions: Complexity and Approximation},
  booktitle    = {Proceedings of the 16th Italian Conference on Theoretical Computer
                  Science, {ICTCS} 2015, Firenze, Italy, September 9-11, 2015},
  series       = {Electronic Notes in Theoretical Computer Science},
  volume       = {322},
  pages        = {35--50},
  publisher    = {Elsevier},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.entcs.2016.03.004},
  doi          = {10.1016/J.ENTCS.2016.03.004},
  timestamp    = {Thu, 10 Nov 2022 11:36:06 +0100},
  biburl       = {https://dblp.org/rec/journals/entcs/BerettaD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/0001CD15,
  author       = {Stefano Beretta and
                  Mauro Castelli and
                  Riccardo Dondi},
  title        = {Parameterized Tractability of the Maximum-Duo Preservation String
                  Mapping Problem},
  journal      = {CoRR},
  volume       = {abs/1512.03220},
  year         = {2015},
  url          = {http://arxiv.org/abs/1512.03220},
  eprinttype    = {arXiv},
  eprint       = {1512.03220},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/0001CD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LafondCDE14,
  author       = {Manuel Lafond and
                  C{\'{e}}dric Chauve and
                  Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  title        = {Polytomy refinement for the correction of dubious duplications in
                  gene trees},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {17},
  pages        = {519--526},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btu463},
  doi          = {10.1093/BIOINFORMATICS/BTU463},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LafondCDE14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/DondiES14,
  author       = {Riccardo Dondi and
                  Nadia El{-}Mabrouk and
                  Krister M. Swenson},
  title        = {Gene tree correction for reconciliation and species tree inference:
                  Complexity and algorithms},
  journal      = {J. Discrete Algorithms},
  volume       = {25},
  pages        = {51--65},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.jda.2013.06.001},
  doi          = {10.1016/J.JDA.2013.06.001},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jda/DondiES14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BlinBDRS14,
  author       = {Guillaume Blin and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Romeo Rizzi and
                  Florian Sikora},
  title        = {Complexity insights of the Minimum Duplication problem},
  journal      = {Theor. Comput. Sci.},
  volume       = {530},
  pages        = {66--79},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.tcs.2014.02.025},
  doi          = {10.1016/J.TCS.2014.02.025},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/BlinBDRS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cie/BerettaD14,
  author       = {Stefano Beretta and
                  Riccardo Dondi},
  editor       = {Arnold Beckmann and
                  Erzs{\'{e}}bet Csuhaj{-}Varj{\'{u}} and
                  Klaus Meer},
  title        = {Gene Tree Correction by Leaf Removal and Modification: Tractability
                  and Approximability},
  booktitle    = {Language, Life, Limits - 10th Conference on Computability in Europe,
                  CiE 2014, Budapest, Hungary, June 23-27, 2014. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8493},
  pages        = {42--52},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-08019-2\_5},
  doi          = {10.1007/978-3-319-08019-2\_5},
  timestamp    = {Tue, 14 May 2019 10:00:41 +0200},
  biburl       = {https://dblp.org/rec/conf/cie/BerettaD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iscopt/BulteauCD14,
  author       = {Laurent Bulteau and
                  Anna Paola Carrieri and
                  Riccardo Dondi},
  editor       = {Pierre Fouilhoux and
                  Luis Eduardo Neves Gouveia and
                  Ali Ridha Mahjoub and
                  Vangelis Th. Paschos},
  title        = {Fixed-Parameter Algorithms for Scaffold Filling},
  booktitle    = {Combinatorial Optimization - Third International Symposium, {ISCO}
                  2014, Lisbon, Portugal, March 5-7, 2014, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {8596},
  pages        = {137--148},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-09174-7\_12},
  doi          = {10.1007/978-3-319-09174-7\_12},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iscopt/BulteauCD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lata/BeerenwinkelBBDP14,
  author       = {Niko Beerenwinkel and
                  Stefano Beretta and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Yuri Pirola},
  editor       = {Adrian{-}Horia Dediu and
                  Carlos Mart{\'{\i}}n{-}Vide and
                  Jos{\'{e}} Luis Sierra{-}Rodr{\'{\i}}guez and
                  Bianca Truthe},
  title        = {Covering Pairs in Directed Acyclic Graphs},
  booktitle    = {Language and Automata Theory and Applications - 8th International
                  Conference, {LATA} 2014, Madrid, Spain, March 10-14, 2014. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8370},
  pages        = {126--137},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-04921-2\_10},
  doi          = {10.1007/978-3-319-04921-2\_10},
  timestamp    = {Sun, 02 Oct 2022 16:11:11 +0200},
  biburl       = {https://dblp.org/rec/conf/lata/BeerenwinkelBBDP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/ncs/BonizzoniCVDP14,
  author       = {Paola Bonizzoni and
                  Anna Paola Carrieri and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Teresa M. Przytycka},
  editor       = {Natasa Jonoska and
                  Masahico Saito},
  title        = {When and How the Perfect Phylogeny Model Explains Evolution},
  booktitle    = {Discrete and Topological Models in Molecular Biology},
  series       = {Natural Computing Series},
  pages        = {67--83},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-642-40193-0\_4},
  doi          = {10.1007/978-3-642-40193-0\_4},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/series/ncs/BonizzoniCVDP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithms/BonizzoniDP13,
  author       = {Paola Bonizzoni and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Maximum Disjoint Paths on Edge-Colored Graphs: Approximability and
                  Tractability},
  journal      = {Algorithms},
  volume       = {6},
  number       = {1},
  pages        = {1--11},
  year         = {2013},
  url          = {https://doi.org/10.3390/a6010001},
  doi          = {10.3390/A6010001},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithms/BonizzoniDP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/BonizzoniVDP13,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Parameterized complexity of k-anonymity: hardness and tractability},
  journal      = {J. Comb. Optim.},
  volume       = {26},
  number       = {1},
  pages        = {19--43},
  year         = {2013},
  url          = {https://doi.org/10.1007/s10878-011-9428-9},
  doi          = {10.1007/S10878-011-9428-9},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jco/BonizzoniVDP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/Dondi13,
  author       = {Riccardo Dondi},
  title        = {The constrained shortest common supersequence problem},
  journal      = {J. Discrete Algorithms},
  volume       = {21},
  pages        = {11--17},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.jda.2013.03.004},
  doi          = {10.1016/J.JDA.2013.03.004},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jda/Dondi13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DondiFV13,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  title        = {Finding approximate and constrained motifs in graphs},
  journal      = {Theor. Comput. Sci.},
  volume       = {483},
  pages        = {10--21},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.tcs.2012.08.023},
  doi          = {10.1016/J.TCS.2012.08.023},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/DondiFV13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/DondiMZ13,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  title        = {The l-Diversity problem: Tractability and approximability},
  journal      = {Theor. Comput. Sci.},
  volume       = {511},
  pages        = {159--171},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.tcs.2012.05.024},
  doi          = {10.1016/J.TCS.2012.05.024},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/DondiMZ13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cie/DondiE13,
  author       = {Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  editor       = {Paola Bonizzoni and
                  Vasco Brattka and
                  Benedikt L{\"{o}}we},
  title        = {Aligning and Labeling Genomes under the Duplication-Loss Model},
  booktitle    = {The Nature of Computation. Logic, Algorithms, Applications - 9th Conference
                  on Computability in Europe, CiE 2013, Milan, Italy, July 1-5, 2013.
                  Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7921},
  pages        = {97--107},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-642-39053-1\_11},
  doi          = {10.1007/978-3-642-39053-1\_11},
  timestamp    = {Tue, 14 May 2019 10:00:41 +0200},
  biburl       = {https://dblp.org/rec/conf/cie/DondiE13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lata/BenzaidDE13,
  author       = {Billel Benzaid and
                  Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  editor       = {Adrian{-}Horia Dediu and
                  Carlos Mart{\'{\i}}n{-}Vide and
                  Bianca Truthe},
  title        = {Duplication-Loss Genome Alignment: Complexity and Algorithm},
  booktitle    = {Language and Automata Theory and Applications - 7th International
                  Conference, {LATA} 2013, Bilbao, Spain, April 2-5, 2013. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7810},
  pages        = {116--127},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-642-37064-9\_12},
  doi          = {10.1007/978-3-642-37064-9\_12},
  timestamp    = {Mon, 16 Sep 2019 15:27:03 +0200},
  biburl       = {https://dblp.org/rec/conf/lata/BenzaidDE13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tamc/ChesterDW13,
  author       = {Andrew Chester and
                  Riccardo Dondi and
                  Anthony Wirth},
  editor       = {T.{-}H. Hubert Chan and
                  Lap Chi Lau and
                  Luca Trevisan},
  title        = {Resolving Rooted Triplet Inconsistency by Dissolving Multigraphs},
  booktitle    = {Theory and Applications of Models of Computation, 10th International
                  Conference, {TAMC} 2013, Hong Kong, China, May 20-22, 2013. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7876},
  pages        = {260--271},
  publisher    = {Springer},
  year         = {2013},
  url          = {https://doi.org/10.1007/978-3-642-38236-9\_24},
  doi          = {10.1007/978-3-642-38236-9\_24},
  timestamp    = {Thu, 05 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/tamc/ChesterDW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/BeerenwinkelBBDP13,
  author       = {Niko Beerenwinkel and
                  Stefano Beretta and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Covering Pairs in Directed Acyclic Graphs},
  journal      = {CoRR},
  volume       = {abs/1310.5037},
  year         = {2013},
  url          = {http://arxiv.org/abs/1310.5037},
  eprinttype    = {arXiv},
  eprint       = {1310.5037},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/BeerenwinkelBBDP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Dondi12,
  author       = {Riccardo Dondi},
  title        = {New results for the Longest Haplotype Reconstruction problem},
  journal      = {Discret. Appl. Math.},
  volume       = {160},
  number       = {9},
  pages        = {1299--1310},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.dam.2011.10.014},
  doi          = {10.1016/J.DAM.2011.10.014},
  timestamp    = {Thu, 11 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/dam/Dondi12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/BlinBDS12,
  author       = {Guillaume Blin and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Florian Sikora},
  title        = {On the parameterized complexity of the repetition free longest common
                  subsequence problem},
  journal      = {Inf. Process. Lett.},
  volume       = {112},
  number       = {7},
  pages        = {272--276},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.ipl.2011.12.009},
  doi          = {10.1016/J.IPL.2011.12.009},
  timestamp    = {Tue, 06 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ipl/BlinBDS12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BonizzoniVD12,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {A randomized {PTAS} for the minimum Consensus Clustering with a fixed
                  number of clusters},
  journal      = {Theor. Comput. Sci.},
  volume       = {429},
  pages        = {36--45},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.tcs.2011.12.022},
  doi          = {10.1016/J.TCS.2011.12.022},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/BonizzoniVD12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BonizzoniBDT12,
  author       = {Paola Bonizzoni and
                  Chiara Braghin and
                  Riccardo Dondi and
                  Gabriella Trucco},
  title        = {The binary perfect phylogeny with persistent characters},
  journal      = {Theor. Comput. Sci.},
  volume       = {454},
  pages        = {51--63},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.tcs.2012.05.035},
  doi          = {10.1016/J.TCS.2012.05.035},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcs/BonizzoniBDT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/DondiE12,
  author       = {Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  editor       = {Juha K{\"{a}}rkk{\"{a}}inen and
                  Jens Stoye},
  title        = {Minimum Leaf Removal for Reconciliation: Complexity and Algorithms},
  booktitle    = {Combinatorial Pattern Matching - 23rd Annual Symposium, {CPM} 2012,
                  Helsinki, Finland, July 3-5, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7354},
  pages        = {399--412},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-31265-6\_32},
  doi          = {10.1007/978-3-642-31265-6\_32},
  timestamp    = {Tue, 21 Mar 2023 21:02:12 +0100},
  biburl       = {https://dblp.org/rec/conf/cpm/DondiE12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwpec/BonizzoniDMZ12,
  author       = {Paola Bonizzoni and
                  Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Dimitrios M. Thilikos and
                  Gerhard J. Woeginger},
  title        = {Restricted and Swap Common Superstring: {A} Parameterized View},
  booktitle    = {Parameterized and Exact Computation - 7th International Symposium,
                  {IPEC} 2012, Ljubljana, Slovenia, September 12-14, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7535},
  pages        = {49--60},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-33293-7\_7},
  doi          = {10.1007/978-3-642-33293-7\_7},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iwpec/BonizzoniDMZ12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sofsem/BlinBDRS12,
  author       = {Guillaume Blin and
                  Paola Bonizzoni and
                  Riccardo Dondi and
                  Romeo Rizzi and
                  Florian Sikora},
  editor       = {M{\'{a}}ria Bielikov{\'{a}} and
                  Gerhard Friedrich and
                  Georg Gottlob and
                  Stefan Katzenbeisser and
                  Gy{\"{o}}rgy Tur{\'{a}}n},
  title        = {Complexity Insights of the Minimum Duplication Problem},
  booktitle    = {{SOFSEM} 2012: Theory and Practice of Computer Science - 38th Conference
                  on Current Trends in Theory and Practice of Computer Science, {\v{S}}pindler{\r{u}}v
                  Ml{\'{y}}n, Czech Republic, January 21-27, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7147},
  pages        = {153--164},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-27660-6\_13},
  doi          = {10.1007/978-3-642-27660-6\_13},
  timestamp    = {Tue, 14 May 2019 10:00:44 +0200},
  biburl       = {https://dblp.org/rec/conf/sofsem/BlinBDRS12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1206-1877,
  author       = {Riccardo Dondi and
                  Nadia El{-}Mabrouk},
  title        = {On the Complexity of Minimum Labeling Alignment of Two Genomes},
  journal      = {CoRR},
  volume       = {abs/1206.1877},
  year         = {2012},
  url          = {http://arxiv.org/abs/1206.1877},
  eprinttype    = {arXiv},
  eprint       = {1206.1877},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1206-1877.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jco/BonizzoniVD11,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {Anonymizing binary and small tables is hard to approximate},
  journal      = {J. Comb. Optim.},
  volume       = {22},
  number       = {1},
  pages        = {97--119},
  year         = {2011},
  url          = {https://doi.org/10.1007/s10878-009-9277-y},
  doi          = {10.1007/S10878-009-9277-Y},
  timestamp    = {Tue, 06 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jco/BonizzoniVD11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jda/DondiFV11,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  title        = {Complexity issues in vertex-colored graph pattern matching},
  journal      = {J. Discrete Algorithms},
  volume       = {9},
  number       = {1},
  pages        = {82--99},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.jda.2010.09.002},
  doi          = {10.1016/J.JDA.2010.09.002},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jda/DondiFV11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/DondiFV11,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  editor       = {Raffaele Giancarlo and
                  Giovanni Manzini},
  title        = {Finding Approximate and Constrained Motifs in Graphs},
  booktitle    = {Combinatorial Pattern Matching - 22nd Annual Symposium, {CPM} 2011,
                  Palermo, Italy, June 27-29, 2011. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {6661},
  pages        = {388--401},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-21458-5\_33},
  doi          = {10.1007/978-3-642-21458-5\_33},
  timestamp    = {Tue, 14 May 2019 10:00:38 +0200},
  biburl       = {https://dblp.org/rec/conf/cpm/DondiFV11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mfcs/DondiMZ11,
  author       = {Riccardo Dondi and
                  Giancarlo Mauri and
                  Italo Zoppis},
  editor       = {Filip Murlak and
                  Piotr Sankowski},
  title        = {On the Complexity of the l-diversity Problem},
  booktitle    = {Mathematical Foundations of Computer Science 2011 - 36th International
                  Symposium, {MFCS} 2011, Warsaw, Poland, August 22-26, 2011. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {6907},
  pages        = {266--277},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-22993-0\_26},
  doi          = {10.1007/978-3-642-22993-0\_26},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mfcs/DondiMZ11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1110-6739,
  author       = {Chiara Braghin and
                  Riccardo Dondi and
                  Gabriella Trucco and
                  Paola Bonizzoni},
  title        = {The Binary Perfect Phylogeny with Persistent characters},
  journal      = {CoRR},
  volume       = {abs/1110.6739},
  year         = {2011},
  url          = {http://arxiv.org/abs/1110.6739},
  eprinttype    = {arXiv},
  eprint       = {1110.6739},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1110-6739.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/BonizzoniVDM10,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Giancarlo Mauri},
  title        = {Fingerprint Clustering with Bounded Number of Missing Values},
  journal      = {Algorithmica},
  volume       = {58},
  number       = {2},
  pages        = {282--303},
  year         = {2010},
  url          = {https://doi.org/10.1007/s00453-008-9265-0},
  doi          = {10.1007/S00453-008-9265-0},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/algorithmica/BonizzoniVDM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipl/BonizzoniVDP10,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Variants of constrained longest common subsequence},
  journal      = {Inf. Process. Lett.},
  volume       = {110},
  number       = {20},
  pages        = {877--881},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.ipl.2010.07.015},
  doi          = {10.1016/J.IPL.2010.07.015},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ipl/BonizzoniVDP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/VedovaDJPPW10,
  author       = {Gianluca Della Vedova and
                  Riccardo Dondi and
                  Tao Jiang and
                  Giulio Pavesi and
                  Yuri Pirola and
                  Lusheng Wang},
  title        = {Beyond evolutionary trees},
  journal      = {Nat. Comput.},
  volume       = {9},
  number       = {2},
  pages        = {421--435},
  year         = {2010},
  url          = {https://doi.org/10.1007/s11047-009-9156-6},
  doi          = {10.1007/S11047-009-9156-6},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/VedovaDJPPW10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BonizzoniVDPR10,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Romeo Rizzi},
  title        = {Pure Parsimony Xor Haplotyping},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {598--610},
  year         = {2010},
  url          = {https://doi.org/10.1109/TCBB.2010.52},
  doi          = {10.1109/TCBB.2010.52},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BonizzoniVDPR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwoca/BonizzoniVDP10,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola},
  editor       = {Costas S. Iliopoulos and
                  William F. Smyth},
  title        = {Parameterized Complexity of \emph{k}-Anonymity: Hardness and Tractability},
  booktitle    = {Combinatorial Algorithms - 21st International Workshop, {IWOCA} 2010,
                  London, UK, July 26-28, 2010, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {6460},
  pages        = {242--255},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-3-642-19222-7\_25},
  doi          = {10.1007/978-3-642-19222-7\_25},
  timestamp    = {Mon, 15 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iwoca/BonizzoniVDP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1001-1210,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Romeo Rizzi},
  title        = {Pure Parsimony Xor Haplotyping},
  journal      = {CoRR},
  volume       = {abs/1001.1210},
  year         = {2010},
  url          = {http://arxiv.org/abs/1001.1210},
  eprinttype    = {arXiv},
  eprint       = {1001.1210},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1001-1210.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/DondiFV09,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  editor       = {Gregory Kucherov and
                  Esko Ukkonen},
  title        = {Maximum Motif Problem in Vertex-Colored Graphs},
  booktitle    = {Combinatorial Pattern Matching, 20th Annual Symposium, {CPM} 2009,
                  Lille, France, June 22-24, 2009, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5577},
  pages        = {221--235},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-02441-2\_20},
  doi          = {10.1007/978-3-642-02441-2\_20},
  timestamp    = {Tue, 14 May 2019 10:00:38 +0200},
  biburl       = {https://dblp.org/rec/conf/cpm/DondiFV09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fct/BonizzoniVD09,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  editor       = {Miroslaw Kutylowski and
                  Witold Charatonik and
                  Maciej Gebala},
  title        = {The \emph{k}-Anonymity Problem Is Hard},
  booktitle    = {Fundamentals of Computation Theory, 17th International Symposium,
                  {FCT} 2009, Wroclaw, Poland, September 2-4, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5699},
  pages        = {26--37},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-03409-1\_4},
  doi          = {10.1007/978-3-642-03409-1\_4},
  timestamp    = {Tue, 14 May 2019 10:00:53 +0200},
  biburl       = {https://dblp.org/rec/conf/fct/BonizzoniVD09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fct/Dondi09,
  author       = {Riccardo Dondi},
  editor       = {Miroslaw Kutylowski and
                  Witold Charatonik and
                  Maciej Gebala},
  title        = {The Longest Haplotype Reconstruction Problem Revisited},
  booktitle    = {Fundamentals of Computation Theory, 17th International Symposium,
                  {FCT} 2009, Wroclaw, Poland, September 2-4, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5699},
  pages        = {109--120},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-03409-1\_11},
  doi          = {10.1007/978-3-642-03409-1\_11},
  timestamp    = {Wed, 17 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/fct/Dondi09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictcs/BonizzoniVD09,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  editor       = {Alessandra Cherubini and
                  Mario Coppo and
                  Giuseppe Persiano},
  title        = {A {PTAS} for the Minimum Consensus Clustering Problem with a Fixed
                  Number of Clusters},
  booktitle    = {Theoretical Computer Science, 11th Italian Conference, {ICTCS} 2009,
                  Cremona, Italy, September 28-30, 2009, Proceedings},
  pages        = {55--58},
  year         = {2009},
  timestamp    = {Tue, 28 May 2013 14:21:59 +0200},
  biburl       = {https://dblp.org/rec/conf/ictcs/BonizzoniVD09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BonizzoniVDPR09,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Romeo Rizzi},
  editor       = {Ion I. Mandoiu and
                  Giri Narasimhan and
                  Yanqing Zhang},
  title        = {Pure Parsimony Xor Haplotyping},
  booktitle    = {Bioinformatics Research and Applications, 5th International Symposium,
                  {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5542},
  pages        = {186--197},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-01551-9\_19},
  doi          = {10.1007/978-3-642-01551-9\_19},
  timestamp    = {Fri, 24 Mar 2023 16:31:04 +0100},
  biburl       = {https://dblp.org/rec/conf/isbra/BonizzoniVDPR09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/BonizzoniVDPR09,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola and
                  Raffaella Rizzi},
  editor       = {Steven Salzberg and
                  Tandy J. Warnow},
  title        = {Minimum Factorization Agreement of Spliced ESTs},
  booktitle    = {Algorithms in Bioinformatics, 9th International Workshop, {WABI} 2009,
                  Philadelphia, PA, USA, September 12-13, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5724},
  pages        = {1--12},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-04241-6\_1},
  doi          = {10.1007/978-3-642-04241-6\_1},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/BonizzoniVDPR09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0907-1840,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {A {PTAS} for the Minimum Consensus Clustering Problem with a Fixed
                  Number of Clusters},
  journal      = {CoRR},
  volume       = {abs/0907.1840},
  year         = {2009},
  url          = {http://arxiv.org/abs/0907.1840},
  eprinttype    = {arXiv},
  eprint       = {0907.1840},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-0907-1840.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0910-3148,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Parameterized Complexity of the k-anonymity Problem},
  journal      = {CoRR},
  volume       = {abs/0910.3148},
  year         = {2009},
  url          = {http://arxiv.org/abs/0910.3148},
  eprinttype    = {arXiv},
  eprint       = {0910.3148},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-0910-3148.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0912-0368,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Yuri Pirola},
  title        = {Variants of Constrained Longest Common Subsequence},
  journal      = {CoRR},
  volume       = {abs/0912.0368},
  year         = {2009},
  url          = {http://arxiv.org/abs/0912.0368},
  eprinttype    = {arXiv},
  eprint       = {0912.0368},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-0912-0368.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithmica/AlbertDDS08,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Eduardo D. Sontag},
  title        = {Inferring (Biological) Signal Transduction Networks via Transitive
                  Reductions of Directed Graphs},
  journal      = {Algorithmica},
  volume       = {51},
  number       = {2},
  pages        = {129--159},
  year         = {2008},
  url          = {https://doi.org/10.1007/s00453-007-9055-0},
  doi          = {10.1007/S00453-007-9055-0},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/algorithmica/AlbertDDS08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcss/BonizzoniVDJ08,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Tao Jiang},
  title        = {On the Approximation of Correlation Clustering and Consensus Clustering},
  journal      = {J. Comput. Syst. Sci.},
  volume       = {74},
  number       = {5},
  pages        = {671--696},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.jcss.2007.06.024},
  doi          = {10.1016/J.JCSS.2007.06.024},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcss/BonizzoniVDJ08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wsks/MangiatordiDF08,
  author       = {Andrea Mangiatordi and
                  Riccardo Dondi and
                  Walter Fornasa},
  editor       = {Miltiadis D. Lytras and
                  John M. Carroll and
                  Ernesto Damiani and
                  Robert D. Tennyson and
                  David E. Avison and
                  Gottfried Vossen and
                  Patricia Ord{\'{o}}{\~{n}}ez de Pablos},
  title        = {Moving Assistive Technology on the Web: The Farfalla Experience},
  booktitle    = {The Open Knowlege Society. {A} Computer Science and Information Systems
                  Manifesto, First World Summit on the Knowledge Society, {WSKS} 2008,
                  Athens, Greece, September 24-26, 2008. Proceedings},
  series       = {Communications in Computer and Information Science},
  volume       = {19},
  pages        = {598--602},
  publisher    = {Springer},
  year         = {2008},
  url          = {https://doi.org/10.1007/978-3-540-87783-7\_76},
  doi          = {10.1007/978-3-540-87783-7\_76},
  timestamp    = {Thu, 30 Mar 2023 17:48:17 +0200},
  biburl       = {https://dblp.org/rec/conf/wsks/MangiatordiDF08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/AlbertDDKSZW07,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Sema Kachalo and
                  Eduardo D. Sontag and
                  Alexander Zelikovsky and
                  Kelly Westbrooks},
  title        = {A Novel Method for Signal Transduction Network Inference from Indirect
                  Experimental Evidence},
  journal      = {J. Comput. Biol.},
  volume       = {14},
  number       = {7},
  pages        = {927--949},
  year         = {2007},
  url          = {https://doi.org/10.1089/cmb.2007.0015},
  doi          = {10.1089/CMB.2007.0015},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcb/AlbertDDKSZW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BonizzoniVDFRV07,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Guillaume Fertin and
                  Raffaella Rizzi and
                  St{\'{e}}phane Vialette},
  title        = {Exemplar Longest Common Subsequence},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {4},
  number       = {4},
  pages        = {535--543},
  year         = {2007},
  url          = {https://doi.org/10.1109/TCBB.2007.1066},
  doi          = {10.1109/TCBB.2007.1066},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/BonizzoniVDFRV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictcs/DondiFV07,
  author       = {Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  editor       = {Giuseppe F. Italiano and
                  Eugenio Moggi and
                  Luigi Laura},
  title        = {Weak pattern matching in colored graphs: Minimizing the number of
                  connected components},
  booktitle    = {Theoretical Computer Science, 10th Italian Conference, {ICTCS} 2007,
                  Rome, Italy, October 3-5, 2007, Proceedings},
  pages        = {27--38},
  publisher    = {World Scientific},
  year         = {2007},
  timestamp    = {Wed, 11 Jun 2008 08:55:26 +0200},
  biburl       = {https://dblp.org/rec/conf/ictcs/DondiFV07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/AlbertDDKSZW07,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Sema Kachalo and
                  Eduardo D. Sontag and
                  Alexander Zelikovsky and
                  Kelly Westbrooks},
  editor       = {Raffaele Giancarlo and
                  Sridhar Hannenhalli},
  title        = {A Novel Method for Signal Transduction Network Inference from Indirect
                  Experimental Evidence},
  booktitle    = {Algorithms in Bioinformatics, 7th International Workshop, {WABI} 2007,
                  Philadelphia, PA, USA, September 8-9, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4645},
  pages        = {407--419},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74126-8\_38},
  doi          = {10.1007/978-3-540-74126-8\_38},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/wabi/AlbertDDKSZW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0707-0421,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {Anonymizing Binary Tables is APX-hard},
  journal      = {CoRR},
  volume       = {abs/0707.0421},
  year         = {2007},
  url          = {http://arxiv.org/abs/0707.0421},
  eprinttype    = {arXiv},
  eprint       = {0707.0421},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-0707-0421.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/BonizzoniVDM06,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Giancarlo Mauri},
  editor       = {Moshe Lewenstein and
                  Gabriel Valiente},
  title        = {Fingerprint Clustering with Bounded Number of Missing Values},
  booktitle    = {Combinatorial Pattern Matching, 17th Annual Symposium, {CPM} 2006,
                  Barcelona, Spain, July 5-7, 2006, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4009},
  pages        = {106--116},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11780441\_11},
  doi          = {10.1007/11780441\_11},
  timestamp    = {Tue, 14 May 2019 10:00:38 +0200},
  biburl       = {https://dblp.org/rec/conf/cpm/BonizzoniVDM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BonizzoniVDFV06,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Guillaume Fertin and
                  St{\'{e}}phane Vialette},
  editor       = {Vassil N. Alexandrov and
                  G. Dick van Albada and
                  Peter M. A. Sloot and
                  Jack J. Dongarra},
  title        = {Exemplar Longest Common Subsequence},
  booktitle    = {Computational Science - {ICCS} 2006, 6th International Conference,
                  Reading, UK, May 28-31, 2006, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3992},
  pages        = {622--629},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11758525\_85},
  doi          = {10.1007/11758525\_85},
  timestamp    = {Tue, 14 May 2019 10:00:48 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/BonizzoniVDFV06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR06-010,
  author       = {R{\'{e}}ka Albert and
                  Bhaskar DasGupta and
                  Riccardo Dondi and
                  Eduardo D. Sontag},
  title        = {Inferring (Biological) Signal Transduction Networks via Transitive
                  Reductions of Directed Graphs},
  journal      = {Electron. Colloquium Comput. Complex.},
  volume       = {{TR06-010}},
  year         = {2006},
  url          = {https://eccc.weizmann.ac.il/eccc-reports/2006/TR06-010/index.html},
  eprinttype    = {ECCC},
  eprint       = {TR06-010},
  timestamp    = {Wed, 28 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/eccc/ECCC-TR06-010.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/it/Dondi05,
  author       = {Riccardo Dondi},
  title        = {Computational problems in the study of genomic variations},
  school       = {University of Milan, Italy},
  year         = {2005},
  url          = {https://opac.bncf.firenze.sbn.it/bncf-prod/resource?uri=BNI0019120},
  timestamp    = {Thu, 27 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/phd/it/Dondi05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/BonizzoniVDM05,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Lorenzo Mariani},
  title        = {Experimental analysis of a new algorithm for partial haplotype completion},
  journal      = {Int. J. Bioinform. Res. Appl.},
  volume       = {1},
  number       = {4},
  pages        = {461--473},
  year         = {2005},
  url          = {https://doi.org/10.1504/IJBRA.2005.008448},
  doi          = {10.1504/IJBRA.2005.008448},
  timestamp    = {Fri, 11 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbra/BonizzoniVDM05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/BonizzoniVD05,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {Reconciling a gene tree to a species tree under the duplication cost
                  model},
  journal      = {Theor. Comput. Sci.},
  volume       = {347},
  number       = {1-2},
  pages        = {36--53},
  year         = {2005},
  url          = {https://doi.org/10.1016/j.tcs.2005.05.016},
  doi          = {10.1016/J.TCS.2005.05.016},
  timestamp    = {Wed, 17 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tcs/BonizzoniVD05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/BonizzoniVDM05,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Lorenzo Mariani},
  editor       = {Vaidy S. Sunderam and
                  G. Dick van Albada and
                  Peter M. A. Sloot and
                  Jack J. Dongarra},
  title        = {Experimental Analysis of a New Algorithm for Partial Haplotype Completion},
  booktitle    = {Computational Science - {ICCS} 2005, 5th International Conference,
                  Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3515},
  pages        = {952--959},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11428848\_121},
  doi          = {10.1007/11428848\_121},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iccS/BonizzoniVDM05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isaac/BonizzoniVDJ05,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Tao Jiang},
  editor       = {Xiaotie Deng and
                  Ding{-}Zhu Du},
  title        = {Correlation Clustering and Consensus Clustering},
  booktitle    = {Algorithms and Computation, 16th International Symposium, {ISAAC}
                  2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3827},
  pages        = {226--235},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11602613\_24},
  doi          = {10.1007/11602613\_24},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isaac/BonizzoniVDJ05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-cs-0511082,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  title        = {Approximating Clustering of Fingerprint Vectors with Missing Values},
  journal      = {CoRR},
  volume       = {abs/cs/0511082},
  year         = {2005},
  url          = {http://arxiv.org/abs/cs/0511082},
  eprinttype    = {arXiv},
  eprint       = {cs/0511082},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-cs-0511082.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcst/BonizzoniVDL03,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi and
                  Jing Li},
  title        = {The Haplotyping Problem: An Overview of Computational Models and Solutions},
  journal      = {J. Comput. Sci. Technol.},
  volume       = {18},
  number       = {6},
  pages        = {675--688},
  year         = {2003},
  url          = {https://doi.org/10.1007/BF02945456},
  doi          = {10.1007/BF02945456},
  timestamp    = {Fri, 02 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcst/BonizzoniVDL03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ciac/BonizzoniVD03,
  author       = {Paola Bonizzoni and
                  Gianluca Della Vedova and
                  Riccardo Dondi},
  editor       = {Rossella Petreschi and
                  Giuseppe Persiano and
                  Riccardo Silvestri},
  title        = {Reconciling Gene Trees to a Species Tree},
  booktitle    = {Algorithms and Complexity, 5th Italian Conference, {CIAC} 2003, Rome,
                  Italy, May 28-30, 2003, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2653},
  pages        = {120--131},
  publisher    = {Springer},
  year         = {2003},
  url          = {https://doi.org/10.1007/3-540-44849-7\_18},
  doi          = {10.1007/3-540-44849-7\_18},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ciac/BonizzoniVD03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/group/AgostiniAMPD03,
  author       = {Alessandra Agostini and
                  Sara Albolino and
                  Giorgio De Michelis and
                  Flavio De Paoli and
                  Riccardo Dondi},
  editor       = {Kjeld Schmidt and
                  Mark Pendergast and
                  Marilyn Tremaine and
                  Carla Simone},
  title        = {Stimulating knowledge discovery and sharing},
  booktitle    = {Proceedings of the 2003 International {ACM} {SIGGROUP} Conference
                  on Supporting Group Work, {GROUP} 2003, Sanibel Island, Florida, USA,
                  November 9-12, 2003},
  pages        = {248--257},
  publisher    = {{ACM}},
  year         = {2003},
  url          = {https://doi.org/10.1145/958160.958199},
  doi          = {10.1145/958160.958199},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/group/AgostiniAMPD03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/seke/BoselliPD03,
  author       = {Roberto Boselli and
                  Flavio De Paoli and
                  Riccardo Dondi},
  title        = {Knowledge Organization and Retrieval in the {MILK} System},
  booktitle    = {Proceedings of the Fifteenth International Conference on Software
                  Engineering {\&} Knowledge Engineering (SEKE'2003), Hotel Sofitel,
                  San Francisco Bay, CA, USA, July 1-3, 2003},
  pages        = {372--376},
  year         = {2003},
  timestamp    = {Fri, 18 Feb 2005 13:16:38 +0100},
  biburl       = {https://dblp.org/rec/conf/seke/BoselliPD03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}