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BibTeX records: Mark J. Clement
@article{DBLP:journals/corr/abs-2305-16275, author = {Chetan Joshi and Lawry Sorenson and Ammon Wolfert and Mark J. Clement and Joseph Price and Kasey Buckles}, title = {{CENSUS-HWR:} a large training dataset for offline handwriting recognition}, journal = {CoRR}, volume = {abs/2305.16275}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2305.16275}, doi = {10.48550/ARXIV.2305.16275}, eprinttype = {arXiv}, eprint = {2305.16275}, timestamp = {Wed, 07 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2305-16275.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icfhr/BurdettFBSSSCP22, author = {Eric Burdett and Stanley Fujimoto and Timothy Brown and Ammon Shurtz and Daniel Segrera and Lawry Sorenson and Mark J. Clement and Joseph Price}, editor = {Utkarsh Porwal and Alicia Forn{\'{e}}s and Faisal Shafait}, title = {Active Transfer Learning for Handwriting Recognition}, booktitle = {Frontiers in Handwriting Recognition - 18th International Conference, {ICFHR} 2022, Hyderabad, India, December 4-7, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13639}, pages = {245--258}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-21648-0\_17}, doi = {10.1007/978-3-031-21648-0\_17}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/icfhr/BurdettFBSSSCP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/FujimotoLC20, author = {M. Stanley Fujimoto and Cole A. Lyman and Mark J. Clement}, title = {Kcollections: {A} Fast and Efficient Library for K-mers}, booktitle = {2020 {IEEE} International Parallel and Distributed Processing Symposium Workshops, {IPDPSW} 2020, New Orleans, LA, USA, May 18-22, 2020}, pages = {193--198}, publisher = {{IEEE}}, year = {2020}, url = {https://doi.org/10.1109/IPDPSW50202.2020.00041}, doi = {10.1109/IPDPSW50202.2020.00041}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ipps/FujimotoLC20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/LymanCCFKB19, author = {Cole A. Lyman and Mark J. Clement and Travis J. A. Craddock and Mary Fletcher and Nancy G. Klimas and Gordon Broderick}, editor = {Xinghua Mindy Shi and Michael Buck and Jian Ma and Pierangelo Veltri}, title = {Feedback Regulation of Immune Response to Maximum Exercise in Gulf War Illness}, booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics, Computational Biology and Health Informatics, {BCB} 2019, Niagara Falls, NY, USA, September 7-10, 2019}, pages = {124--129}, publisher = {{ACM}}, year = {2019}, url = {https://doi.org/10.1145/3307339.3342188}, doi = {10.1145/3307339.3342188}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bcb/LymanCCFKB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/LymanAMNMCB19, author = {Cole A. Lyman and Connor Anderson and Matthew C. Morris and Umesh K. Nandal and Marianna J. Martindale and Mark J. Clement and Gordon Broderick}, editor = {Illhoi Yoo and Jinbo Bi and Xiaohua Hu}, title = {When the How Outweighs the What: the Pivotal Importance of Context}, booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2019, San Diego, CA, USA, November 18-21, 2019}, pages = {2149--2156}, publisher = {{IEEE}}, year = {2019}, url = {https://doi.org/10.1109/BIBM47256.2019.8983294}, doi = {10.1109/BIBM47256.2019.8983294}, timestamp = {Thu, 12 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/LymanAMNMCB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/JensenBDFLSGC18, author = {Tanner D. Jensen and Kristi A. Bresciano and Emma Dallon and M. Stanley Fujimoto and Cole A. Lyman and Enoch Stewart and Joel Griffitts and Mark J. Clement}, editor = {Amarda Shehu and Cathy H. Wu and Christina Boucher and Jing Li and Hongfang Liu and Mihai Pop}, title = {The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in Randomly-Generated Peptide Libraries}, booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} 2018, Washington, DC, USA, August 29 - September 01, 2018}, pages = {139--144}, publisher = {{ACM}}, year = {2018}, url = {https://doi.org/10.1145/3233547.3233599}, doi = {10.1145/3233547.3233599}, timestamp = {Mon, 10 Jun 2024 20:41:10 +0200}, biburl = {https://dblp.org/rec/conf/bcb/JensenBDFLSGC18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FujimotoSJCSB17, author = {M. Stanley Fujimoto and Anton Suvorov and Nicholas O. Jensen and Mark J. Clement and Quinn Snell and Seth M. Bybee}, title = {The OGCleaner: filtering false-positive homology clusters}, journal = {Bioinform.}, volume = {33}, number = {1}, pages = {125--127}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btw571}, doi = {10.1093/BIOINFORMATICS/BTW571}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FujimotoSJCSB17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/FujimotoBLJSC17, author = {Masaki Stanley Fujimoto and Paul M. Bodily and Cole A. Lyman and Andrew J. Jacobsen and Quinn Snell and Mark J. Clement}, title = {Modeling Global and local Codon Bias with Deep Language Models}, booktitle = {17th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2017, Washington, DC, USA, October 23-25, 2017}, pages = {151--156}, publisher = {{IEEE} Computer Society}, year = {2017}, url = {https://doi.org/10.1109/BIBE.2017.00-63}, doi = {10.1109/BIBE.2017.00-63}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/FujimotoBLJSC17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/FujimotoLSBSCBC17, author = {M. Stanley Fujimoto and Cole A. Lyman and Anton Suvorov and Paul M. Bodily and Quinn Snell and Keith A. Crandall and Seth M. Bybee and Mark J. Clement}, title = {Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction}, booktitle = {17th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2017, Washington, DC, USA, October 23-25, 2017}, pages = {212--216}, publisher = {{IEEE} Computer Society}, year = {2017}, url = {https://doi.org/10.1109/BIBE.2017.00-53}, doi = {10.1109/BIBE.2017.00-53}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/FujimotoLSBSCBC17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/LymanFSBSCBC17, author = {Cole A. Lyman and M. Stanley Fujimoto and Anton Suvorov and Paul M. Bodily and Quinn Snell and Keith A. Crandall and Seth M. Bybee and Mark J. Clement}, title = {Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs}, booktitle = {17th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2017, Washington, DC, USA, October 23-25, 2017}, pages = {260--265}, publisher = {{IEEE} Computer Society}, year = {2017}, url = {https://doi.org/10.1109/BIBE.2017.00-44}, doi = {10.1109/BIBE.2017.00-44}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/LymanFSBSCBC17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1709-00164, author = {Cole A. Lyman and M. Stanley Fujimoto and Anton Suvorov and Paul M. Bodily and Quinn Snell and Keith A. Crandall and Seth M. Bybee and Mark J. Clement}, title = {Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs}, journal = {CoRR}, volume = {abs/1709.00164}, year = {2017}, url = {http://arxiv.org/abs/1709.00164}, eprinttype = {arXiv}, eprint = {1709.00164}, timestamp = {Mon, 13 Aug 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1709-00164.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BodilyFSVC16, author = {Paul M. Bodily and M. Stanley Fujimoto and Quinn Snell and Dan Ventura and Mark J. Clement}, title = {ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction}, journal = {Bioinform.}, volume = {32}, number = {1}, pages = {17--24}, year = {2016}, url = {https://doi.org/10.1093/bioinformatics/btv548}, doi = {10.1093/BIOINFORMATICS/BTV548}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BodilyFSVC16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FujimotoSJCB16, author = {M. Stanley Fujimoto and Anton Suvorov and Nicholas O. Jensen and Mark J. Clement and Seth M. Bybee}, title = {Detecting false positive sequence homology: a machine learning approach}, journal = {{BMC} Bioinform.}, volume = {17}, pages = {101}, year = {2016}, url = {https://doi.org/10.1186/s12859-016-0955-3}, doi = {10.1186/S12859-016-0955-3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FujimotoSJCB16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BodilyFPCER16, author = {Paul M. Bodily and M. Stanley Fujimoto and Justin T. Page and Mark J. Clement and Mark T. W. Ebbert and Perry G. Ridge}, title = {A novel approach for multi-SNP {GWAS} and its application in Alzheimer's disease}, journal = {{BMC} Bioinform.}, volume = {17}, number = {{S-7}}, pages = {268}, year = {2016}, url = {https://doi.org/10.1186/s12859-016-1093-7}, doi = {10.1186/S12859-016-1093-7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BodilyFPCER16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BodilyFOOPCS15, author = {Paul M. Bodily and M. Stanley Fujimoto and Cameron Ortega and Nozomu Okuda and Jared C. Price and Mark J. Clement and Quinn Snell}, title = {Heterozygous genome assembly via binary classification of homologous sequence}, journal = {{BMC} Bioinform.}, volume = {16}, number = {{S-7}}, pages = {S5}, year = {2015}, url = {https://doi.org/10.1186/1471-2105-16-S7-S5}, doi = {10.1186/1471-2105-16-S7-S5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/BodilyFOOPCS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FujimotoBOCS14, author = {M. Stanley Fujimoto and Paul M. Bodily and Nozomu Okuda and Mark J. Clement and Quinn Snell}, title = {Effects of error-correction of heterozygous next-generation sequencing data}, journal = {{BMC} Bioinform.}, volume = {15}, number = {{S-7}}, pages = {S3}, year = {2014}, url = {https://doi.org/10.1186/1471-2105-15-S7-S3}, doi = {10.1186/1471-2105-15-S7-S3}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FujimotoBOCS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/BodilyCSFR14, author = {Paul M. Bodily and Mark J. Clement and Quinn Snell and M. Stanley Fujimoto and Perry G. Ridge}, editor = {Pierre Baldi and Wei Wang}, title = {Haplotype-centered mapping for improved alignments and genetic association studies}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {499--505}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2649435}, doi = {10.1145/2649387.2649435}, timestamp = {Tue, 06 Nov 2018 16:59:10 +0100}, biburl = {https://dblp.org/rec/conf/bcb/BodilyCSFR14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/SeeleyCGSBF14, author = {Matthew Seeley and Mark J. Clement and Christophe G. Giraud{-}Carrier and Quinn Snell and Paul M. Bodily and Stanley Fujimoto}, editor = {Pierre Baldi and Wei Wang}, title = {A structured approach to ensemble learning for Alzheimer's disease prediction}, booktitle = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational Biology, and Health Informatics, {BCB} '14, Newport Beach, California, USA, September 20-23, 2014}, pages = {605--606}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2649387.2660797}, doi = {10.1145/2649387.2660797}, timestamp = {Fri, 17 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/SeeleyCGSBF14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HongCCHCCSCJ13, author = {Changjin Hong and Nathan L. Clement and Spencer Clement and Saher Sue Hammoud and Douglas T. Carrell and Bradley R. Cairns and Quinn Snell and Mark J. Clement and William Evan Johnson}, title = {Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data}, journal = {{BMC} Bioinform.}, volume = {14}, pages = {337}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-337}, doi = {10.1186/1471-2105-14-337}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/HongCCHCCSCJ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JensenJCS13, author = {James D. Jensen and Daniel M. Jensen and Mark J. Clement and Quinn O. Snell}, title = {Probabilistic inference and ranking of gene regulatory pathways as a shortest-path problem}, journal = {{BMC} Bioinform.}, volume = {14}, number = {{S-13}}, pages = {S5}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-S13-S5}, doi = {10.1186/1471-2105-14-S13-S5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JensenJCS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bcb/BodilyCSPFO13, author = {Paul M. Bodily and Mark J. Clement and Quinn Snell and Jared C. Price and Stanley Fujimoto and Nozomu Okuda}, editor = {Jing Gao}, title = {Application of a {MAX-CUT} Heuristic to the Contig Orientation Problem in Genome Assembly}, booktitle = {{ACM} Conference on Bioinformatics, Computational Biology and Biomedical Informatics. {ACM-BCB} 2013, Washington, DC, USA, September 22-25, 2013}, pages = {476}, publisher = {{ACM}}, year = {2013}, url = {https://doi.org/10.1145/2506583.2506606}, doi = {10.1145/2506583.2506606}, timestamp = {Fri, 17 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bcb/BodilyCSPFO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/PriceWUSC13, author = {Jared C. Price and Judson Ward and Joshua Udall and Quinn Snell and Mark J. Clement}, title = {Identification and correction of substitution errors in Moleculo long reads}, booktitle = {13th {IEEE} International Conference on BioInformatics and BioEngineering, {BIBE} 2013, Chania, Greece, November 10-13, 2013}, pages = {1--4}, publisher = {{IEEE} Computer Society}, year = {2013}, url = {https://doi.org/10.1109/BIBE.2013.6701609}, doi = {10.1109/BIBE.2013.6701609}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/PriceWUSC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/SeeleyCS13, author = {Matt Seeley and Mark J. Clement and Quinn Snell}, title = {Feature identification and reduction for improved generalization accuracy in secondary-structure prediction}, booktitle = {13th {IEEE} International Conference on BioInformatics and BioEngineering, {BIBE} 2013, Chania, Greece, November 10-13, 2013}, pages = {1--4}, publisher = {{IEEE} Computer Society}, year = {2013}, url = {https://doi.org/10.1109/BIBE.2013.6701610}, doi = {10.1109/BIBE.2013.6701610}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/SeeleyCS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SundbergCSVWC12, author = {Kenneth Sundberg and Mark J. Clement and Quinn Snell and Dan Ventura and Michael Whiting and Keith A. Crandall}, title = {Phylogenetic search through partial tree mixing}, journal = {{BMC} Bioinform.}, volume = {13}, number = {{S-13}}, pages = {S8}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-S13-S8}, doi = {10.1186/1471-2105-13-S13-S8}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SundbergCSVWC12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementSAB12, author = {Mark J. Clement and Quinn Snell and Srinivas Aluru and David A. Bader}, title = {HiCOMB Introduction}, booktitle = {26th {IEEE} International Parallel and Distributed Processing Symposium Workshops {\&} PhD Forum, {IPDPS} 2012, Shanghai, China, May 21-25, 2012}, pages = {663--664}, publisher = {{IEEE} Computer Society}, year = {2012}, url = {https://doi.org/10.1109/IPDPSW.2012.338}, doi = {10.1109/IPDPSW.2012.338}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementSAB12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementSBTGSCJ12, author = {Nathan L. Clement and Brent A. Shepherd and Paul M. Bodily and Sukhbat Tumur{-}Ochir and Younghoon Gim and Quinn Snell and Mark J. Clement and W. Evan Johnson}, title = {Parallel Pair-HMM {SNP} Detection}, booktitle = {26th {IEEE} International Parallel and Distributed Processing Symposium Workshops {\&} PhD Forum, {IPDPS} 2012, Shanghai, China, May 21-25, 2012}, pages = {675--683}, publisher = {{IEEE} Computer Society}, year = {2012}, url = {https://doi.org/10.1109/IPDPSW.2012.84}, doi = {10.1109/IPDPSW.2012.84}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementSBTGSCJ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementCSJ11, author = {Nathan L. Clement and Mark J. Clement and Quinn Snell and W. Evan Johnson}, title = {Parallel Mapping Approaches for {GNUMAP}}, booktitle = {25th {IEEE} International Symposium on Parallel and Distributed Processing, {IPDPS} 2011, Anchorage, Alaska, USA, 16-20 May 2011 - Workshop Proceedings}, pages = {435--443}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/IPDPS.2011.184}, doi = {10.1109/IPDPS.2011.184}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementCSJ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/almob/SundbergCS10, author = {Kenneth Sundberg and Mark J. Clement and Quinn Snell}, title = {On the use of cartographic projections in visualizing phylo-genetic tree space}, journal = {Algorithms Mol. Biol.}, volume = {5}, pages = {26}, year = {2010}, url = {https://doi.org/10.1186/1748-7188-5-26}, doi = {10.1186/1748-7188-5-26}, timestamp = {Fri, 13 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/almob/SundbergCS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ClementSCHPGCJ10, author = {Nathan L. Clement and Quinn Snell and Mark J. Clement and Peter C. Hollenhorst and Jahnvi Purwar and Barbara J. Graves and Bradley R. Cairns and W. Evan Johnson}, title = {The {GNUMAP} algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing}, journal = {Bioinform.}, volume = {26}, number = {1}, pages = {38--45}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btp614}, doi = {10.1093/BIOINFORMATICS/BTP614}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ClementSCHPGCJ10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ClementGBCMOCSAR10, author = {Kendell Clement and Nathaniel Gustafson and Amanda Berbert and Hyrum Carroll and Christopher Merris and Ammon Olsen and Mark J. Clement and Quinn Snell and Jared Allen and Randall J. Roper}, title = {PathGen: a transitive gene pathway generator}, journal = {Bioinform.}, volume = {26}, number = {3}, pages = {423--425}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btp661}, doi = {10.1093/BIOINFORMATICS/BTP661}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ClementGBCMOCSAR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/EagarCS10, author = {Mike Eagar and Mark J. Clement and Quinn Snell}, editor = {Hamid R. Arabnia and Quoc{-}Nam Tran and Rui Chang and Matthew He and Andy Marsh and Ashu M. G. Solo and Jack Y. Yang}, title = {Spatially Indexing Sequences using Hashes}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2010, July 12-15, 2010, Las Vegas Nevada, USA, 2 Volumes}, pages = {811--814}, publisher = {{CSREA} Press}, year = {2010}, timestamp = {Mon, 06 Dec 2010 13:28:59 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/EagarCS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/OlsonCS10, author = {Lukas Olson and Mark J. Clement and Quinn Snell}, editor = {Hamid R. Arabnia and Quoc{-}Nam Tran and Rui Chang and Matthew He and Andy Marsh and Ashu M. G. Solo and Jack Y. Yang}, title = {The Impact of Equally-Optimal Pairwise Alignments}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2010, July 12-15, 2010, Las Vegas Nevada, USA, 2 Volumes}, pages = {870--872}, publisher = {{CSREA} Press}, year = {2010}, timestamp = {Mon, 06 Dec 2010 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/OlsonCS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijbra/CarrollTKSSC09, author = {Hyrum Carroll and Adam R. Teichert and Jonathan Krein and Kenneth Sundberg and Quinn Snell and Mark J. Clement}, title = {An open source phylogenetic search and alignment package}, journal = {Int. J. Bioinform. Res. Appl.}, volume = {5}, number = {3}, pages = {349--364}, year = {2009}, url = {https://doi.org/10.1504/IJBRA.2009.026424}, doi = {10.1504/IJBRA.2009.026424}, timestamp = {Fri, 11 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijbra/CarrollTKSSC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibm/CarrollCSM09, author = {Hyrum Carroll and Mark J. Clement and Quinn Snell and David A. McClellan}, title = {ChemAlign: Biologically Relevant Multiple Sequence Alignment Using Physicochemical Properties}, booktitle = {2009 {IEEE} International Conference on Bioinformatics and Biomedicine, {BIBM} 2009, Washington, DC, USA, November 1-4, 2009, Proceedings}, pages = {70--73}, publisher = {{IEEE} Computer Society}, year = {2009}, url = {https://doi.org/10.1109/BIBM.2009.75}, doi = {10.1109/BIBM.2009.75}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibm/CarrollCSM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/OviattCSSAR09, author = {David Oviatt and Mark J. Clement and Quinn Snell and Kenneth Sundberg and Jared Allen and Randall J. Roper}, editor = {Hamid R. Arabnia and Mary Qu Yang}, title = {Inferring Gene Regulatory Networks from Asynchronous Microarray Data}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2009, July 13-16, 2009, Las Vegas Nevada, USA, 2 Volumes}, pages = {142--147}, publisher = {{CSREA} Press}, year = {2009}, timestamp = {Wed, 28 Oct 2009 10:44:56 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/OviattCSSAR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/OConnorSCCS09, author = {Timothy O'Connor and Kenneth Sundberg and Hyrum Carroll and Mark J. Clement and Quinn Snell}, editor = {Hamid R. Arabnia and Mary Qu Yang}, title = {Analysis of Long Branch Extraction}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2009, July 13-16, 2009, Las Vegas Nevada, USA, 2 Volumes}, pages = {489--495}, publisher = {{CSREA} Press}, year = {2009}, timestamp = {Fri, 27 Nov 2009 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biocomp/OConnorSCCS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SundbergCS09, author = {Kenneth Sundberg and Mark J. Clement and Quinn Snell}, editor = {Steven Salzberg and Tandy J. Warnow}, title = {Visualizing Phylogenetic Treespace Using Cartographic Projections}, booktitle = {Algorithms in Bioinformatics, 9th International Workshop, {WABI} 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5724}, pages = {321--332}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-04241-6\_27}, doi = {10.1007/978-3-642-04241-6\_27}, timestamp = {Tue, 14 May 2019 10:00:40 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SundbergCS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijcbdd/SundbergOCCS08, author = {Kenneth Sundberg and Timothy O'Connor and Hyrum Carroll and Mark J. Clement and Quinn Snell}, title = {Parsimony accelerated Maximum Likelihood searches}, journal = {Int. J. Comput. Biol. Drug Des.}, volume = {1}, number = {1}, pages = {74--87}, year = {2008}, url = {https://doi.org/10.1504/IJCBDD.2008.018711}, doi = {10.1504/IJCBDD.2008.018711}, timestamp = {Sat, 25 Apr 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijcbdd/SundbergOCCS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/SundbergEWSC08, author = {Kenneth Sundberg and Daniel Ence and Daniel Wilcox and Quinn Snell and Mark J. Clement}, editor = {Hamid R. Arabnia and Mary Qu Yang and Jack Y. Yang}, title = {Genomic Scale Reconstruction of Gene Regulatory Networks from Microarray Data}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2008, July 14-17, 2008, Las Vegas Nevada, USA, 2 Volumes}, pages = {68--71}, publisher = {{CSREA} Press}, year = {2008}, timestamp = {Wed, 08 Jul 2009 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/biocomp/SundbergEWSC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biocomp/SundbergCSC08, author = {Kenneth Sundberg and Hyrum Carroll and Quinn Snell and Mark J. Clement}, editor = {Hamid R. Arabnia and Mary Qu Yang and Jack Y. Yang}, title = {Incomparability of Results Between Phylogenetic Search Programs}, booktitle = {International Conference on Bioinformatics {\&} Computational Biology, {BIOCOMP} 2008, July 14-17, 2008, Las Vegas Nevada, USA, 2 Volumes}, pages = {81--84}, publisher = {{CSREA} Press}, year = {2008}, timestamp = {Wed, 08 Jul 2009 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/biocomp/SundbergCSC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/CarrollBOECSM07, author = {Hyrum Carroll and Wesley A. Beckstead and Timothy O'Connor and Mark T. W. Ebbert and Mark J. Clement and Quinn Snell and David A. McClellan}, title = {{DNA} reference alignment benchmarks based on tertiary structure of encoded proteins}, journal = {Bioinform.}, volume = {23}, number = {19}, pages = {2648--2649}, year = {2007}, url = {https://doi.org/10.1093/bioinformatics/btm389}, doi = {10.1093/BIOINFORMATICS/BTM389}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/CarrollBOECSM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijbra/EbbertBOCM07, author = {Mark T. W. Ebbert and Wesley A. Beckstead and Timothy O'Connor and Mark J. Clement and David A. McClellan}, title = {Pharmacogenomics: analysing SNPs in the {CYP2D6} gene using amino acid properties}, journal = {Int. J. Bioinform. Res. Appl.}, volume = {3}, number = {4}, pages = {471--479}, year = {2007}, url = {https://doi.org/10.1504/IJBRA.2007.015415}, doi = {10.1504/IJBRA.2007.015415}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijbra/EbbertBOCM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijbra/CarrollRCS07, author = {Hyrum Carroll and Perry G. Ridge and Mark J. Clement and Quinn Snell}, title = {Phylogenies scores for exhaustive searches and parsimony scores searches}, journal = {Int. J. Bioinform. Res. Appl.}, volume = {3}, number = {4}, pages = {493--503}, year = {2007}, url = {https://doi.org/10.1504/IJBRA.2007.015417}, doi = {10.1504/IJBRA.2007.015417}, timestamp = {Fri, 11 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijbra/CarrollRCS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/SundbergOCCS07, author = {Kenneth Sundberg and Timothy O'Connor and Hyrum Carroll and Mark J. Clement and Quinn Snell}, title = {Using Parsimony to Guide Maximum Likelihood Searches}, booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, {USA}}, pages = {774--779}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/BIBE.2007.4375648}, doi = {10.1109/BIBE.2007.4375648}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/SundbergOCCS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/fmcad/RungtaCMRCS07, author = {Neha Rungta and Hyrum Carroll and Eric G. Mercer and Randall J. Roper and Mark J. Clement and Quinn Snell}, title = {Analyzing Gene Relationships for Down Syndrome with Labeled Transition Graphs}, booktitle = {Formal Methods in Computer-Aided Design, 7th International Conference, {FMCAD} 2007, Austin, Texas, USA, November 11-14, 2007, Proceedings}, pages = {216--219}, publisher = {{IEEE} Computer Society}, year = {2007}, url = {https://doi.org/10.1109/FAMCAD.2007.24}, doi = {10.1109/FAMCAD.2007.24}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/fmcad/RungtaCMRCS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ijbra/MechamCSFSC06, author = {Jesse Mecham and Mark J. Clement and Quinn Snell and Todd Freestone and Kevin D. Seppi and Keith A. Crandall}, title = {Jumpstarting phylogenetic analysis}, journal = {Int. J. Bioinform. Res. Appl.}, volume = {2}, number = {1}, pages = {19--35}, year = {2006}, url = {https://doi.org/10.1504/IJBRA.2006.009191}, doi = {10.1504/IJBRA.2006.009191}, timestamp = {Fri, 11 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ijbra/MechamCSFSC06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/RidgeCSCS06, author = {Perry G. Ridge and Hyrum Carroll and Dan Sneddon and Mark J. Clement and Quinn Snell}, title = {Large Grain Size Stochastic Optimization Alignment}, booktitle = {Sixth {IEEE} International Symposium on BioInformatics and BioEngineering {(BIBE} 2006), 16-18 October 2006, Arlington, Virginia, {USA}}, pages = {127--134}, publisher = {{IEEE} Computer Society}, year = {2006}, url = {https://doi.org/10.1109/BIBE.2006.253325}, doi = {10.1109/BIBE.2006.253325}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/RidgeCSCS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cic/DeccioCS04, author = {Casey T. Deccio and Mark J. Clement and Quinn Snell}, editor = {Brian J. d'Auriol}, title = {A Survivable Multi-agent Approach to Network Routing}, booktitle = {Proceedings of the International Conference on Communications in Computing, {CIC} '04, June 21-24, 2004, Las Vegas, Nevada, {USA}}, pages = {9--13}, publisher = {{CSREA} Press}, year = {2004}, timestamp = {Thu, 23 Dec 2004 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cic/DeccioCS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cic/BroadbentDC04, author = {Reid Broadbent and Casey T. Deccio and Mark J. Clement}, editor = {Brian J. d'Auriol}, title = {Temporal Difference Learning in Network Routing}, booktitle = {Proceedings of the International Conference on Communications in Computing, {CIC} '04, June 21-24, 2004, Las Vegas, Nevada, {USA}}, pages = {14--20}, publisher = {{CSREA} Press}, year = {2004}, timestamp = {Thu, 23 Dec 2004 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cic/BroadbentDC04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipccc/BallCHSD04, author = {Robert Ball and Mark J. Clement and Feng Huang and Quinn Snell and Casey T. Deccio}, title = {Aggressive telecommunications overbooking ratios}, booktitle = {Proceedings of the 23rd {IEEE} International Performance Computing and Communications Conference, {IPCCC} 2004, April 15-17, 2004, Phoenix, Arizona, {USA}}, pages = {31--38}, publisher = {{IEEE}}, year = {2004}, url = {https://doi.org/10.1109/PCCC.2004.1394937}, doi = {10.1109/PCCC.2004.1394937}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipccc/BallCHSD04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/SnellTEC02, author = {Quinn Snell and Kevin Tew and Joseph J. Ekstrom and Mark J. Clement}, title = {An Enterprise-Based Grid Resource Management System}, booktitle = {11th {IEEE} International Symposium on High Performance Distributed Computing {(HPDC-11} 2002), 23-26 July 2002, Edinburgh, Scotland, {UK}}, pages = {83}, publisher = {{IEEE} Computer Society}, year = {2002}, url = {https://doi.org/10.1109/HPDC.2002.1029906}, doi = {10.1109/HPDC.2002.1029906}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/SnellTEC02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementSWPC02, author = {Mark J. Clement and Quinn Snell and Peter Walker and David Posada and Keith A. Crandall}, title = {{TCS:} Estimating Gene Genealogies}, booktitle = {16th International Parallel and Distributed Processing Symposium {(IPDPS} 2002), 15-19 April 2002, Fort Lauderdale, FL, USA, CD-ROM/Abstracts Proceedings}, publisher = {{IEEE} Computer Society}, year = {2002}, url = {https://doi.org/10.1109/IPDPS.2002.1016585}, doi = {10.1109/IPDPS.2002.1016585}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementSWPC02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jsspp/SnellCJ02, author = {Quinn Snell and Mark J. Clement and David B. Jackson}, editor = {Dror G. Feitelson and Larry Rudolph and Uwe Schwiegelshohn}, title = {Preemption Based Backfill}, booktitle = {Job Scheduling Strategies for Parallel Processing, 8th International Workshop, {JSSPP} 2002, Edinburgh, Scotland, UK, July 24, 2002, Revised Papers}, series = {Lecture Notes in Computer Science}, volume = {2537}, pages = {24--37}, publisher = {Springer}, year = {2002}, url = {https://doi.org/10.1007/3-540-36180-4\_2}, doi = {10.1007/3-540-36180-4\_2}, timestamp = {Tue, 14 May 2019 10:00:50 +0200}, biburl = {https://dblp.org/rec/conf/jsspp/SnellCJ02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cluster/TurgeonSC01, author = {Andr{\'{e}} Turgeon and Quinn Snell and Mark J. Clement}, title = {Object Placement Using Performance Surfaces}, journal = {Clust. Comput.}, volume = {4}, number = {3}, pages = {263--273}, year = {2001}, url = {https://doi.org/10.1023/A:1011406826169}, doi = {10.1023/A:1011406826169}, timestamp = {Tue, 29 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cluster/TurgeonSC01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/JardineSC01, author = {John Jardine and Quinn Snell and Mark J. Clement}, title = {Livelock Avoidance for Meta-Schedulers}, booktitle = {10th {IEEE} International Symposium on High Performance Distributed Computing {(HPDC-10} 2001), 7-9 August 2001, San Francisco, CA, {USA}}, pages = {141--146}, publisher = {{IEEE} Computer Society}, year = {2001}, url = {https://doi.org/10.1109/HPDC.2001.945184}, doi = {10.1109/HPDC.2001.945184}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/JardineSC01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jsspp/JacksonSC01, author = {David B. Jackson and Quinn Snell and Mark J. Clement}, editor = {Dror G. Feitelson and Larry Rudolph}, title = {Core Algorithms of the Maui Scheduler}, booktitle = {Job Scheduling Strategies for Parallel Processing, 7th International Workshop, {JSSPP} 2001, Cambridge, MA, USA, June 16, 2001, Revised Papers}, series = {Lecture Notes in Computer Science}, volume = {2221}, pages = {87--102}, publisher = {Springer}, year = {2001}, url = {https://doi.org/10.1007/3-540-45540-X\_6}, doi = {10.1007/3-540-45540-X\_6}, timestamp = {Tue, 14 May 2019 10:00:50 +0200}, biburl = {https://dblp.org/rec/conf/jsspp/JacksonSC01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/mascots/LiHC01, author = {Zhi Li and John Higgins and Mark J. Clement}, title = {Performance of Finite Field Arithmetic in an Elliptic Curve Cryptosystem}, booktitle = {9th International Workshop on Modeling, Analysis, and Simulation of Computer and Telecommunication Systems {(MASCOTS} 2001), 15-18 August 2001, Cincinnati, OH, {USA}}, pages = {249}, publisher = {{IEEE} Computer Society}, year = {2001}, url = {https://doi.org/10.1109/MASCOT.2001.948875}, doi = {10.1109/MASCOT.2001.948875}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/mascots/LiHC01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sacmat/AkkerSC01, author = {Ty van den Akker and Quinn Snell and Mark J. Clement}, editor = {Ravi S. Sandhu and Trent Jaeger}, title = {The YGuard access control model: set-based access control}, booktitle = {6th {ACM} Symposium on Access Control Models and Technologies, {SACMAT} 2001, Litton-TASC, Chantilly, Virginia, USA, May 3-4, 2001}, pages = {75--84}, publisher = {{ACM}}, year = {2001}, url = {https://doi.org/10.1145/373256.373268}, doi = {10.1145/373256.373268}, timestamp = {Tue, 09 Feb 2021 08:50:30 +0100}, biburl = {https://dblp.org/rec/conf/sacmat/AkkerSC01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/TurgeonSC00, author = {Andr{\'{e}} Turgeon and Quinn Snell and Mark J. Clement}, title = {Application Placement using Performance Surfaces}, booktitle = {Proceedings of the Ninth {IEEE} International Symposium on High Performance Distributed Computing, HPDC'00, Pittsburgh, Pennsylvania, USA, August 1-4, 2000}, pages = {229--236}, publisher = {{IEEE} Computer Society}, year = {2000}, url = {https://doi.org/10.1109/HPDC.2000.868654}, doi = {10.1109/HPDC.2000.868654}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/TurgeonSC00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jsspp/SnellCJG00, author = {Quinn Snell and Mark J. Clement and David B. Jackson and Chad Gregory}, editor = {Dror G. Feitelson and Larry Rudolph}, title = {The Performance Impact of Advance Reservation Meta-scheduling}, booktitle = {Job Scheduling Strategies for Parallel Processing, {IPDPS} 2000 Workshop, {JSSPP} 2000, Cancun, Mexico, May 1, 2000, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1911}, pages = {137--153}, publisher = {Springer}, year = {2000}, url = {https://doi.org/10.1007/3-540-39997-6\_9}, doi = {10.1007/3-540-39997-6\_9}, timestamp = {Tue, 14 May 2019 10:00:50 +0200}, biburl = {https://dblp.org/rec/conf/jsspp/SnellCJG00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/SnellWCM00, author = {Quinn Snell and Michael Whiting and Mark J. Clement and David McLaughlin}, editor = {Jed Donnelley}, title = {Parallel Phylogenetic Inference}, booktitle = {Proceedings Supercomputing 2000, November 4-10, 2000, Dallas, Texas, {USA.} {IEEE} Computer Society, {CD-ROM}}, pages = {35}, publisher = {{IEEE} Computer Society}, year = {2000}, url = {https://doi.org/10.1109/SC.2000.10062}, doi = {10.1109/SC.2000.10062}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/SnellWCM00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/scpe/SnellJC99, author = {Quinn Snell and Glenn Judd and Mark J. Clement}, title = {The {DOGMA} Approach to Parallel and Distributed Computing}, journal = {Parallel Distributed Comput. Pract.}, volume = {2}, number = {2}, year = {1999}, url = {http://www.scpe.org/index.php/scpe/article/view/125}, timestamp = {Mon, 01 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/scpe/SnellJC99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tjs/ClementS99, author = {Mark J. Clement and Xian{-}He Sun}, title = {Editorial}, journal = {J. Supercomput.}, volume = {13}, number = {3}, pages = {247}, year = {1999}, url = {https://doi.org/10.1023/A:1008057201991}, doi = {10.1023/A:1008057201991}, timestamp = {Fri, 22 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tjs/ClementS99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tjs/ClementJMF99, author = {Mark J. Clement and Glenn Judd and Bryan S. Morse and J. Kelly Flanagan}, title = {Performance Surface Prediction for WAN-Based Clusters}, journal = {J. Supercomput.}, volume = {13}, number = {3}, pages = {267--281}, year = {1999}, url = {https://doi.org/10.1023/A:1008057019892}, doi = {10.1023/A:1008057019892}, timestamp = {Fri, 22 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tjs/ClementJMF99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpcn/YuCSM99, author = {Shuling Yu and Mark J. Clement and Quinn Snell and Bryan S. Morse}, editor = {Peter M. A. Sloot and Marian Bubak and Alfons G. Hoekstra and Louis O. Hertzberger}, title = {Parallel Algorithm and Processor Selection Based on Fuzzy Logic}, booktitle = {High-Performance Computing and Networking, 7th International Conference, {HPCN} Europe 1999, Amsterdam, The Netherlands, April 12-14, 1999, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1593}, pages = {440--449}, publisher = {Springer}, year = {1999}, url = {https://doi.org/10.1007/BFb0100605}, doi = {10.1007/BFB0100605}, timestamp = {Sun, 12 Nov 2023 02:09:00 +0100}, biburl = {https://dblp.org/rec/conf/hpcn/YuCSM99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/ButlerCS99, author = {Kevin Butler and Mark J. Clement and Quinn Snell}, title = {A Performance Broker for {CORBA}}, booktitle = {Proceedings of the Eighth {IEEE} International Symposium on High Performance Distributed Computing, HPDC'99, Redondo Beach, California, USA, August 3-6, 1999}, pages = {19--26}, publisher = {{IEEE} Computer Society}, year = {1999}, url = {https://doi.org/10.1109/HPDC.1999.805278}, doi = {10.1109/HPDC.1999.805278}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/ButlerCS99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/ClementSJW99, author = {Mark J. Clement and Quinn Snell and Glenn Judd and Michael Whiting}, title = {High Performance Phylogenetic Inference}, booktitle = {Proceedings of the Eighth {IEEE} International Symposium on High Performance Distributed Computing, HPDC'99, Redondo Beach, California, USA, August 3-6, 1999}, pages = {335--336}, publisher = {{IEEE} Computer Society}, year = {1999}, url = {https://doi.org/10.1109/HPDC.1999.805315}, doi = {10.1109/HPDC.1999.805315}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/ClementSJW99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementSJ99, author = {Mark J. Clement and Quinn Snell and Glenn Judd}, editor = {Jos{\'{e}} D. P. Rolim and Frank Mueller and Albert Y. Zomaya and Fikret Er{\c{c}}al and Stephan Olariu and Binoy Ravindran and Jan Gustafsson and Hiroaki Takada and Ronald A. Olsson and Laxmikant V. Kal{\'{e}} and Peter H. Beckman and Matthew Haines and Hossam A. ElGindy and Denis Caromel and Serge Chaumette and Geoffrey C. Fox and Yi Pan and Keqin Li and Tao Yang and G. Ghiola and Gianni Conte and Luigi V. Mancini and Dominique M{\'{e}}ry and Beverly A. Sanders and Devesh Bhatt and Viktor K. Prasanna}, title = {High Performance Computing for the Masses}, booktitle = {Parallel and Distributed Processing, 11 IPPS/SPDP'99 Workshops Held in Conjunction with the 13th International Parallel Processing Symposium and 10th Symposium on Parallel and Distributed Processing, San Juan, Puerto Rico, USA, April 12-16, 1999, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1586}, pages = {781--796}, publisher = {Springer}, year = {1999}, url = {https://doi.org/10.1007/BFb0097966}, doi = {10.1007/BFB0097966}, timestamp = {Mon, 22 Mar 2021 14:03:05 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementSJ99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/java/JuddCSG99, author = {Glenn Judd and Mark J. Clement and Quinn Snell and Vladimir Getov}, editor = {Geoffrey C. Fox and Klaus E. Schauser and Marc Snir}, title = {Design Issues for Efficient Implementation of {MPI} in Java}, booktitle = {Proceedings of the {ACM} 1999 Conference on Java Grande, {JAVA} '99, San Francisco, CA, USA, June 12-14, 1999}, pages = {58--65}, publisher = {{ACM}}, year = {1999}, url = {https://doi.org/10.1145/304065.304097}, doi = {10.1145/304065.304097}, timestamp = {Tue, 06 Nov 2018 11:07:44 +0100}, biburl = {https://dblp.org/rec/conf/java/JuddCSG99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/pdpta/ClementSJA99, author = {Mark J. Clement and Quinn Snell and David B. Jackson and David Ashton}, editor = {Hamid R. Arabnia}, title = {High Performance Scheduling for Windows {NT}}, booktitle = {Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, {PDPTA} 1999, June 28 - July 1, 1999, Las Vegas, Nevada, {USA}}, pages = {525--531}, publisher = {{CSREA} Press}, year = {1999}, timestamp = {Tue, 30 Jul 2024 10:34:32 +0200}, biburl = {https://dblp.org/rec/conf/pdpta/ClementSJA99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/concurrency/JuddCS98, author = {Glenn Judd and Mark J. Clement and Quinn Snell}, title = {{DOGMA:} distributed object group metacomputing architecture}, journal = {Concurr. Pract. Exp.}, volume = {10}, number = {11-13}, pages = {977--983}, year = {1998}, url = {https://doi.org/10.1002/(SICI)1096-9128(199809/11)10:11/13\&\#60;977::AID-CPE400\&\#62;3.0.CO;2-H}, doi = {10.1002/(SICI)1096-9128(199809/11)10:11/13\&\#60;977::AID-CPE400\&\#62;3.0.CO;2-H}, timestamp = {Thu, 21 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/concurrency/JuddCS98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hicss/ClementJPMF98, author = {Mark J. Clement and Glenn Judd and Joy L. Peterson and Bryan S. Morse and J. Kelly Flanagan}, title = {Performance Surface Prediction for WAN-Based Clusters}, booktitle = {Thirty-First Annual Hawaii International Conference on System Sciences, Kohala Coast, Hawaii, USA, January 6-9, 1998}, pages = {564--573}, publisher = {{IEEE} Computer Society}, year = {1998}, url = {https://doi.org/10.1109/HICSS.1998.649254}, doi = {10.1109/HICSS.1998.649254}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hicss/ClementJPMF98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/JuddCS98, author = {Glenn Judd and Mark J. Clement and Quinn Snell}, title = {The {DOGMA} Approach to High-Utilization Supercomputing}, booktitle = {Proceedings of the Seventh {IEEE} International Symposium on High Performance Distributed Computing, {HPDC} '98, Chicago, Illinois, USA, July 28-31, 1998}, pages = {64--70}, publisher = {{IEEE} Computer Society}, year = {1998}, url = {https://doi.org/10.1109/HPDC.1998.709957}, doi = {10.1109/HPDC.1998.709957}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/JuddCS98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/pc/ClementQ97, author = {Mark J. Clement and Michael J. Quinn}, title = {Automated Performance Prediction for Scalable Parallel Computing}, journal = {Parallel Comput.}, volume = {23}, number = {10}, pages = {1405--1420}, year = {1997}, url = {https://doi.org/10.1016/S0167-8191(97)00066-5}, doi = {10.1016/S0167-8191(97)00066-5}, timestamp = {Sat, 22 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/pc/ClementQ97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/WilliamsC97, author = {John Williams and Mark J. Clement}, title = {Distributed Polyphonic Music Synthesis}, booktitle = {Proceedings of the 6th International Symposium on High Performance Distributed Computing, {HPDC} '97, Portland, OR, USA, August 5-8, 1997}, pages = {20--29}, publisher = {{IEEE} Computer Society}, year = {1997}, url = {https://doi.org/10.1109/HPDC.1997.622359}, doi = {10.1109/HPDC.1997.622359}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/WilliamsC97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/LeichtlCC97, author = {Johann Leichtl and Phyllis Crandall and Mark J. Clement}, title = {Parallel Programming in Multi-Paradigm Clusters}, booktitle = {Proceedings of the 6th International Symposium on High Performance Distributed Computing, {HPDC} '97, Portland, OR, USA, August 5-8, 1997}, pages = {326--335}, publisher = {{IEEE} Computer Society}, year = {1997}, url = {https://doi.org/10.1109/HPDC.1997.626438}, doi = {10.1109/HPDC.1997.626438}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/LeichtlCC97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/pdpta/ClementMFWC97, author = {Mark J. Clement and Bryan S. Morse and J. Kelly Flanagan and Wei Wei and Phyllis E. Crandall}, editor = {Hamid R. Arabnia}, title = {The Chordal Spoke {ATM} Interconnection Network}, booktitle = {Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, {PDPTA} 1997, June 30 - July 3, 1997, Las Vegas, Nevada, {USA}}, pages = {1259--1267}, publisher = {{CSREA} Press}, year = {1997}, timestamp = {Tue, 20 Apr 2004 14:47:02 +0200}, biburl = {https://dblp.org/rec/conf/pdpta/ClementMFWC97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hpdc/CrandallSC96, author = {Phyllis Crandall and Eranti V. Sumithasri and Mark J. Clement}, title = {Performance Comparison of Desktop Multiprocessing and Workstation Cluster Computing}, booktitle = {Proceedings of the 5th International Symposium on High Performance Distributed Computing {(HPDC} '96), Syracuse, NY, USA, August 6-9, 1996}, pages = {272--281}, publisher = {{IEEE} Computer Society}, year = {1996}, url = {https://doi.org/10.1109/HPDC.1996.546197}, doi = {10.1109/HPDC.1996.546197}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hpdc/CrandallSC96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/SteedC96, author = {Michael R. Steed and Mark J. Clement}, title = {Performance Prediction of {PVM} Programs}, booktitle = {Proceedings of {IPPS} '96, The 10th International Parallel Processing Symposium, April 15-19, 1996, Honolulu, Hawaii, {USA}}, pages = {803--807}, publisher = {{IEEE} Computer Society}, year = {1996}, url = {https://doi.org/10.1109/IPPS.1996.508151}, doi = {10.1109/IPPS.1996.508151}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/SteedC96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/pdpta/ClementFS96, author = {Mark J. Clement and J. Kelly Flanagan and Michael R. Steed}, editor = {Hamid R. Arabnia}, title = {Cost Optimal Analysis for Workstation Clusters}, booktitle = {Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, {PDPTA} 1996, August 9-11, 1996, Sunnyvale, California, {USA}}, pages = {1308--1318}, publisher = {{CSREA} Press}, year = {1996}, timestamp = {Tue, 02 Nov 2004 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/pdpta/ClementFS96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/ClementSC96, author = {Mark J. Clement and Michael R. Steed and Phyllis E. Crandall}, title = {Network Performance Modeling for {PVM} Clusters}, booktitle = {Proceedings of the 1996 {ACM/IEEE} Conference on Supercomputing, November 17-22, 1996, Pittsburgh, PA, {USA}}, pages = {6}, publisher = {{IEEE} Computer Society}, year = {1996}, url = {https://doi.ieeecomputersociety.org/10.1109/SC.1996.27}, doi = {10.1109/SC.1996.27}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/ClementSC96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jpdc/ClementQ95, author = {Mark J. Clement and Michael J. Quinn}, title = {Overlapping Computations, Communications and {I/O} in parallel Sorting}, journal = {J. Parallel Distributed Comput.}, volume = {28}, number = {2}, pages = {162--172}, year = {1995}, url = {https://doi.org/10.1006/jpdc.1995.1097}, doi = {10.1006/JPDC.1995.1097}, timestamp = {Sat, 22 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jpdc/ClementQ95.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/hicss/ClementQ95, author = {Mark J. Clement and Michael J. Quinn}, title = {Multivariate statistical techniques for parallel performance prediction}, booktitle = {28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, {USA}}, pages = {446--455}, publisher = {{IEEE} Computer Society}, year = {1995}, url = {https://doi.org/10.1109/HICSS.1995.375512}, doi = {10.1109/HICSS.1995.375512}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/hicss/ClementQ95.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/ClementQ95, author = {Mark J. Clement and Michael J. Quinn}, title = {Symbolic performance prediction of scalable parallel programs}, booktitle = {Proceedings of {IPPS} '95, The 9th International Parallel Processing Symposium, April 25-28, 1995, Santa Barbara, California, {USA}}, pages = {635--639}, publisher = {{IEEE} Computer Society}, year = {1995}, url = {https://doi.org/10.1109/IPPS.1995.395881}, doi = {10.1109/IPPS.1995.395881}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipps/ClementQ95.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/pdpta/WeiCF95, author = {Wei Wei and Mark J. Clement and J. Kelly Flanagan}, editor = {Hamid R. Arabnia}, title = {The Round Table {ATM} Interconnection Network}, booktitle = {Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications, {PDPTA} 1995, November 3-4, 1995, Georgia, {USA}}, pages = {445--454}, publisher = {{CSREA} Press}, year = {1995}, timestamp = {Mon, 09 Nov 2009 13:57:16 +0100}, biburl = {https://dblp.org/rec/conf/pdpta/WeiCF95.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/ClementQ93, author = {Mark J. Clement and Michael J. Quinn}, editor = {Bob Borchers and Dona Crawford}, title = {Analytical performance prediction on multicomputers}, booktitle = {Proceedings Supercomputing '93, Portland, Oregon, USA, November 15-19, 1993}, pages = {886--894}, publisher = {{ACM}}, year = {1993}, url = {https://doi.org/10.1145/169627.169856}, doi = {10.1145/169627.169856}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/ClementQ93.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/spdp/RamanathanCC92, author = {Gowri Ramanathan and Mark J. Clement and Phyllis Crandall}, title = {Hyperweave: {A} Fault-Tolerant Expandable Interconnection Network}, booktitle = {Proceedings of the Fourth {IEEE} Symposium on Parallel and Distributed Processing, {SPDP} 1992, Arlington, Texas, USA, December 1-4, 1992}, pages = {479--482}, publisher = {{IEEE} Computer Society}, year = {1992}, url = {https://doi.org/10.1109/SPDP.1992.242707}, doi = {10.1109/SPDP.1992.242707}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/spdp/RamanathanCC92.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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