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BibTeX records: Duccio Cavalieri
@proceedings{DBLP:conf/jowo/2022, editor = {Tiago Prince Sales and Maria M. Hedblom and He Tan and Guendalina Righetti and Oliver Kutz and Martin Glauer and Janna Hastings and Till Mossakowski and Fabian Neuhaus and Lucía {Gómez Álvarez} and Rafael Pe{\~{n}}aloza and Srdjan Vesic and Claudenir Morais Fonseca and Jona Thai and Stefano Borgo and Damion M. Dooley and Rhiannon Cameron and Lauren E. Chan and Duccio Cavalieri and Robert Warren and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Matthew Lange and Fernanda Forea and Francesco Vitali and Bart Gajderowicz and Daniela Rosu and Aldo Gangemi and Robert Porzel and Daniel Be{\ss}ler and Mihai Pomarlan and Mohammed Diab and Alberto Olivares Alarcos}, title = {Proceedings of the Joint Ontology Workshops 2022 Episode {VIII:} The Svear Sommar of Ontology, J{\"{o}}nk{\"{o}}ping, Sweden, August 15-19, 2022}, series = {{CEUR} Workshop Proceedings}, volume = {3249}, publisher = {CEUR-WS.org}, year = {2022}, url = {https://ceur-ws.org/Vol-3249}, urn = {urn:nbn:de:0074-3249-2}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/2022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jowo/DooleyABCCCCLMV21, author = {Damion M. Dooley and Liliana Andr{\'{e}}s{-}Hern{\'{a}}ndez and Georgeta Bordea and Leigh Carmody and Duccio Cavalieri and Lauren E. Chan and Pol Castellano{-}Escuder and Carl Lachat and Fleur Mougin and Francesco Vitali and Chen Yang and Magalie Weber and Matthew Lange}, editor = {Emilio M. Sanfilippo and Oliver Kutz and Nicolas Troquard and Torsten Hahmann and Claudio Masolo and Robert Hoehndorf and Randi Vita and Maria M. Hedblom and Guendalina Righetti and Dusan Sormaz and Walter Terkaj and Tiago Prince Sales and Sergio de Cesare and Frederik Gailly and Giancarlo Guizzardi and Mark Lycett and Chris Partridge and Oscar Pastor and Daniel Be{\ss}ler and Stefano Borgo and Mohammed Diab and Aldo Gangemi and Alberto Olivares Alarcos and Mihai Pomarlan and Robert Porzel and Ludger Jansen and Mathias Brochhausen and Daniele Porello and Pawel Garbacz and Selja Sepp{\"{a}}l{\"{a}} and Michael Gr{\"{u}}ninger and Amanda Vizedom and Damion M. Dooley and Robert Warren and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Matthew Lange and Alsayed Algergawy and Naouel Karam and Friederike Klan and Franck Michel and Ilaria Rosati}, title = {{OBO} Foundry Food Ontology Interconnectivity}, booktitle = {Proceedings of the Joint Ontology Workshops 2021 Episode {VII:} The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems {(FOIS} 2021), and the 12th International Conference on Biomedical Ontologies {(ICBO} 2021), Bolzano, Italy, September 11-18, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {2969}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2969/paper13-IFOW.pdf}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/DooleyABCCCCLMV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jowo/Reis-CostaVG0FC21, author = {Ana Reis{-}Costa and Francesco Vitali and Agnese Gori and Giovanni Bacci and Carlotta De Filippo and Duccio Cavalieri}, editor = {Emilio M. Sanfilippo and Oliver Kutz and Nicolas Troquard and Torsten Hahmann and Claudio Masolo and Robert Hoehndorf and Randi Vita and Maria M. Hedblom and Guendalina Righetti and Dusan Sormaz and Walter Terkaj and Tiago Prince Sales and Sergio de Cesare and Frederik Gailly and Giancarlo Guizzardi and Mark Lycett and Chris Partridge and Oscar Pastor and Daniel Be{\ss}ler and Stefano Borgo and Mohammed Diab and Aldo Gangemi and Alberto Olivares Alarcos and Mihai Pomarlan and Robert Porzel and Ludger Jansen and Mathias Brochhausen and Daniele Porello and Pawel Garbacz and Selja Sepp{\"{a}}l{\"{a}} and Michael Gr{\"{u}}ninger and Amanda Vizedom and Damion M. Dooley and Robert Warren and Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and Matthew Lange and Alsayed Algergawy and Naouel Karam and Friederike Klan and Franck Michel and Ilaria Rosati}, title = {{ONS} Modeling of Diet Concepts: Further Development Required by the Objective Definition of "Western Diet"}, booktitle = {Proceedings of the Joint Ontology Workshops 2021 Episode {VII:} The Bolzano Summer of Knowledge co-located with the 12th International Conference on Formal Ontology in Information Systems {(FOIS} 2021), and the 12th International Conference on Biomedical Ontologies {(ICBO} 2021), Bolzano, Italy, September 11-18, 2021}, series = {{CEUR} Workshop Proceedings}, volume = {2969}, publisher = {CEUR-WS.org}, year = {2021}, url = {https://ceur-ws.org/Vol-2969/paper7-IFOW.pdf}, timestamp = {Fri, 10 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/jowo/Reis-CostaVG0FC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BiancoRLFFCTF17, author = {Luca Bianco and Samantha Riccadonna and Enrico Lavezzo and Marco Falda and Elide Formentin and Duccio Cavalieri and Stefano Toppo and Paolo Fontana}, title = {Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms}, journal = {Bioinform.}, volume = {33}, number = {3}, pages = {453--455}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btw636}, doi = {10.1093/BIOINFORMATICS/BTW636}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BiancoRLFFCTF17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/AlbaneseFCD15, author = {Davide Albanese and Carlotta De Filippo and Duccio Cavalieri and Claudio Donati}, title = {Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting}, journal = {PLoS Comput. Biol.}, volume = {11}, number = {3}, year = {2015}, url = {https://doi.org/10.1371/journal.pcbi.1004186}, doi = {10.1371/JOURNAL.PCBI.1004186}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/AlbaneseFCD15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BeltrameBFC13, author = {Luca Beltrame and Luca Bianco and Paolo Fontana and Duccio Cavalieri}, title = {Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data}, journal = {Bioinform.}, volume = {29}, number = {14}, pages = {1825--1826}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt292}, doi = {10.1093/BIOINFORMATICS/BTT292}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BeltrameBFC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/FilippoRFC12, author = {Carlotta De Filippo and Matteo Ramazzotti and Paolo Fontana and Duccio Cavalieri}, title = {Bioinformatic approaches for functional annotation and pathway inference in metagenomics data}, journal = {Briefings Bioinform.}, volume = {13}, number = {6}, pages = {696--710}, year = {2012}, url = {https://doi.org/10.1093/bib/bbs070}, doi = {10.1093/BIB/BBS070}, timestamp = {Thu, 04 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/FilippoRFC12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SalesCCR12, author = {Gabriele Sales and Enrica Calura and Duccio Cavalieri and Chiara Romualdi}, title = {graphite - a Bioconductor package to convert pathway topology to gene network}, journal = {{BMC} Bioinform.}, volume = {13}, pages = {20}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-20}, doi = {10.1186/1471-2105-13-20}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/SalesCCR12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/SplendianiGACSB11, author = {Andrea Splendiani and Michaela G{\"{u}}ndel and Jonathan M. Austyn and Duccio Cavalieri and Ciro Scognamiglio and Marco Brandizi}, title = {Knowledge sharing and collaboration in translational research, and the {DC-THERA} Directory}, journal = {Briefings Bioinform.}, volume = {12}, number = {6}, pages = {562--575}, year = {2011}, url = {https://doi.org/10.1093/bib/bbr051}, doi = {10.1093/BIB/BBR051}, timestamp = {Thu, 04 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/SplendianiGACSB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BeltrameCPRGDRDC11, author = {Luca Beltrame and Enrica Calura and Razvan R. Popovici and Lisa Rizzetto and Damariz Rivero Guedez and Michele Donato and Chiara Romualdi and Sorin Draghici and Duccio Cavalieri}, title = {The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways}, journal = {Bioinform.}, volume = {27}, number = {15}, pages = {2127--2133}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr339}, doi = {10.1093/BIOINFORMATICS/BTR339}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BeltrameCPRGDRDC11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/CavalieriCTMKGAD07, author = {Duccio Cavalieri and Cinzia Castagnini and Simona Toti and Karolina Maciag and Thomas Kelder and Luca Gambineri and Samuele Angioli and Piero Dolara}, title = {Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases}, journal = {Bioinform.}, volume = {23}, number = {19}, pages = {2631--2632}, year = {2007}, url = {https://doi.org/10.1093/bioinformatics/btm333}, doi = {10.1093/BIOINFORMATICS/BTM333}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/CavalieriCTMKGAD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BallSPRBCCGHHRSSSTBQ02, author = {Catherine A. Ball and Gavin Sherlock and Helen E. Parkinson and Philippe Rocca{-}Serra and Catherine Brooksbank and Helen C. Causton and Duccio Cavalieri and Terry Gaasterland and Pascal Hingamp and Frank C. P. Holstege and Martin Ringwald and Paul T. Spellman and Christian J. Stoeckert Jr. and Jason E. Stewart and Ronald C. Taylor and Alvis Brazma and John Quackenbush}, title = {An open letter to the scientific journals}, journal = {Bioinform.}, volume = {18}, number = {11}, pages = {1409}, year = {2002}, url = {https://doi.org/10.1093/bioinformatics/18.11.1409}, doi = {10.1093/BIOINFORMATICS/18.11.1409}, timestamp = {Tue, 28 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BallSPRBCCGHHRSSSTBQ02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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