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ORCIDBibTeX records: Richard A. Baldock
@article{DBLP:journals/midm/BurgerBADPGHHSWA23,
author = {Albert Burger and
Richard A. Baldock and
David J. Adams and
Shahida Din and
Irene Papatheodorou and
Michael Glinka and
Bill Hill and
Derek Houghton and
Mehran Sharghi and
Michael N. Wicks and
Mark J. Arends},
title = {Towards a clinically-based common coordinate framework for the human
gut cell atlas: the gut models},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23},
number = {1},
pages = {36},
year = {2023},
url = {https://doi.org/10.1186/s12911-023-02111-9},
doi = {10.1186/S12911-023-02111-9},
timestamp = {Sat, 11 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/BurgerBADPGHHSWA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sensors/ChristidiCEKFBG19,
author = {Savvina Christidi and
Alexia Chrysostomou and
Anastasios Economou and
Christos Kokkinos and
Peter R. Fielden and
Richard A. Baldock and
Nicholas J. Goddard},
title = {Disposable Injection Molded Conductive Electrodes Modified with Antimony
Film for the Electrochemical Determination of Trace Pb(II) and Cd(II)},
journal = {Sensors},
volume = {19},
number = {21},
pages = {4809},
year = {2019},
url = {https://doi.org/10.3390/s19214809},
doi = {10.3390/S19214809},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sensors/ChristidiCEKFBG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ArmitHVMB17,
author = {Chris Armit and
Bill Hill and
Shanmugasundaram Venkataraman and
Kenneth McLeod and
Albert Burger and
Richard A. Baldock},
title = {The 'straight mouse': defining anatomical axes in 3D embryo models},
journal = {Database J. Biol. Databases Curation},
volume = {2017},
pages = {bax010},
year = {2017},
url = {https://doi.org/10.1093/database/bax010},
doi = {10.1093/DATABASE/BAX010},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ArmitHVMB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/AdebayoMTOBBBP16,
author = {Solomon Adebayo and
Kenneth McLeod and
Ilinca Tudose and
David Osumi{-}Sutherland and
Tony Burdett and
Richard A. Baldock and
Albert Burger and
Helen E. Parkinson},
title = {PhenoImageShare: an image annotation and query infrastructure},
journal = {J. Biomed. Semant.},
volume = {7},
pages = {35},
year = {2016},
url = {https://doi.org/10.1186/s13326-016-0072-2},
doi = {10.1186/S13326-016-0072-2},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/AdebayoMTOBBBP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RichardsonGMBRA15,
author = {Lorna J. Richardson and
Liz Graham and
Julie Moss and
Nick Burton and
Yogmatee Roochun and
Chris Armit and
Richard A. Baldock},
title = {Developing the eHistology Atlas},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav105},
doi = {10.1093/DATABASE/BAV105},
timestamp = {Mon, 26 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RichardsonGMBRA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HillB15,
author = {Bill Hill and
Richard A. Baldock},
title = {Constrained distance transforms for spatial atlas registration},
journal = {{BMC} Bioinform.},
volume = {16},
pages = {90:1--90:10},
year = {2015},
url = {https://doi.org/10.1186/s12859-015-0504-5},
doi = {10.1186/S12859-015-0504-5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HillB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SmedleyHDPPAAAB15,
author = {Damian Smedley and
Syed Haider and
Steffen Durinck and
Luca Pandini and
Paolo Provero and
James E. Allen and
Olivier Arnaiz and
Mohammad Hamza Awedh and
Richard A. Baldock and
Giulia Barbiera and
Philippe Bardou and
Tim Beck and
Andrew Blake and
Merideth Bonierbale and
Anthony J. Brookes and
Gabriele Bucci and
Iwan Buetti and
Sarah W. Burge and
C{\'{e}}dric Cabau and
Joseph W. Carlson and
Claude Chelala and
Charalambos Chrysostomou and
Davide Cittaro and
Olivier Collin and
Raul Cordova and
Rosalind J. Cutts and
Erik Dassi and
Alex Di G{\'{e}}nova and
Anis Djari and
Anthony Esposito and
Heather Estrella and
Eduardo Eyras and
Julio Fernandez{-}Banet and
Simon A. Forbes and
Robert C. Free and
Takatomo Fujisawa and
Emanuela Gadaleta and
Jose M. Garcia{-}Manteiga and
David M. Goodstein and
Kristian A. Gray and
Jos{\'{e}} Afonso Guerra{-}Assun{\c{c}}{\~{a}}o and
Bernard Haggarty and
Dongjin Han and
Byungwoo Han and
Todd W. Harris and
Jayson Harshbarger and
Robert K. Hastings and
Richard D. Hayes and
Claire Hoede and
Shen Hu and
Zhi{-}Liang Hu and
Lucie N. Hutchins and
Zhengyan Kan and
Hideya Kawaji and
Aminah{-}Olivia Keliet and
Arnaud Kerhornou and
Sunghoon Kim and
Rhoda Kinsella and
Christophe Klopp and
Lei Kong and
Daniel Lawson and
Dejan Lazarevic and
Ji{-}Hyun Lee and
Thomas Letellier and
Chuan{-}Yun Li and
Pietro Li{\`{o}} and
Chu{-}Jun Liu and
Jie Luo and
Alejandro Maass and
J{\'{e}}r{\^{o}}me Mariette and
Thomas Maurel and
Stefania Merella and
Azza Mostafa Mohamed and
Fran{\c{c}}ois Moreews and
Nabihoudine Ibouniyamine and
Nelson Ndegwa and
C{\'{e}}line Noirot and
Christian Perez{-}Llamas and
Michael Primig and
Alessandro Quattrone and
Hadi Quesneville and
Davide Rambaldi and
James M. Reecy and
Michela Riba and
Steven Rosanoff and
Amna Ali Saddiq and
Elisa Salas and
Olivier Sallou and
Rebecca Shepherd and
Reinhard Simon and
Linda Sperling and
William Spooner and
Daniel M. Staines and
Delphine Steinbach and
Kevin R. Stone and
Elia Stupka and
Jon W. Teague and
Abu Z. Dayem Ullah and
Jun Wang and
Doreen Ware and
Marie Wong{-}Erasmus and
Ken Youens{-}Clark and
Amonida Zadissa and
Shi{-}Jian Zhang and
Arek Kasprzyk},
title = {The BioMart community portal: an innovative alternative to large,
centralized data repositories},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Webserver-Issue},
pages = {W589--W598},
year = {2015},
url = {https://doi.org/10.1093/nar/gkv350},
doi = {10.1093/NAR/GKV350},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SmedleyHDPPAAAB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/McLeodBAHB15,
author = {Kenneth McLeod and
Albert Burger and
Christopher Armit and
Bill Hill and
Richard A. Baldock},
editor = {James Malone and
Robert Stevens and
Kerstin Forsberg and
Andrea Splendiani},
title = {From Letters to Pixels},
booktitle = {Proceedings of the 8th Semantic Web Applications and Tools for Life
Sciences International Conference, Cambridge UK, December 7-10, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1546},
pages = {197--198},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1546/poster\_25.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/McLeodBAHB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/ZaslavskyBB14,
author = {Ilya Zaslavsky and
Richard A. Baldock and
Jyl Boline},
title = {Cyberinfrastructure for the digital brain: spatial standards for integrating
rodent brain atlases},
journal = {Frontiers Neuroinformatics},
volume = {8},
pages = {74},
year = {2014},
url = {https://doi.org/10.3389/fninf.2014.00074},
doi = {10.3389/FNINF.2014.00074},
timestamp = {Thu, 28 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/ZaslavskyBB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RichardsonVSYMGBHRBA14,
author = {Lorna J. Richardson and
Shanmugasundaram Venkataraman and
Peter Stevenson and
Yiya Yang and
Julie Moss and
Liz Graham and
Nicholas Burton and
Bill Hill and
Jianguo Rao and
Richard A. Baldock and
Chris Armit},
title = {{EMAGE} mouse embryo spatial gene expression database: 2014 update},
journal = {Nucleic Acids Res.},
volume = {42},
number = {Database-Issue},
pages = {835--844},
year = {2014},
url = {https://doi.org/10.1093/nar/gkt1155},
doi = {10.1093/NAR/GKT1155},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RichardsonVSYMGBHRBA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TaylorMABB14,
author = {Andy Taylor and
Kenneth McLeod and
Chris Armit and
Richard A. Baldock and
Albert Burger},
title = {Visualization of gene expression information within the context of
the mouse anatomy},
journal = {CoRR},
volume = {abs/1407.2117},
year = {2014},
url = {http://arxiv.org/abs/1407.2117},
eprinttype = {arXiv},
eprint = {1407.2117},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/TaylorMABB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/HayamizuWDBRB13,
author = {Terry F. Hayamizu and
Michael N. Wicks and
Duncan Davidson and
Albert Burger and
Martin Ringwald and
Richard A. Baldock},
title = {{EMAP/EMAPA} ontology of mouse developmental anatomy: 2013 update},
journal = {J. Biomed. Semant.},
volume = {4},
pages = {15},
year = {2013},
url = {https://doi.org/10.1186/2041-1480-4-15},
doi = {10.1186/2041-1480-4-15},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/HayamizuWDBRB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/BonoGBH13,
author = {Bernard de Bono and
Pierre Grenon and
Richard A. Baldock and
Peter Hunter},
title = {Functional tissue units and their primary tissue motifs in multi-scale
physiology},
journal = {J. Biomed. Semant.},
volume = {4},
pages = {22},
year = {2013},
url = {https://doi.org/10.1186/2041-1480-4-22},
doi = {10.1186/2041-1480-4-22},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/BonoGBH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ems/XieHB13,
author = {Zheng Xie and
Liangxiu Han and
Richard A. Baldock},
editor = {David Al{-}Dabass and
Alessandra Orsoni and
Zheng Xie},
title = {Augmented Petri Net Cost Model for Optimisation of Large Bioinformatics
Workflows Using Cloud},
booktitle = {Seventh UKSim/AMSS European Modelling Symposium, {EMS} 2013, 20-22
November, 2013, Manchester {UK}},
pages = {201--205},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/EMS.2013.35},
doi = {10.1109/EMS.2013.35},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ems/XieHB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icitst/HanXB13,
author = {Liangxiu Han and
Zheng Xie and
Richard A. Baldock},
title = {Automatic data reuse for accelerating data intensive applications
in the Cloud},
booktitle = {8th International Conference for Internet Technology and Secured Transactions,
{ICITST} 2013, London, United Kingdom, December 9-12, 2013},
pages = {596--600},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ICITST.2013.6750272},
doi = {10.1109/ICITST.2013.6750272},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icitst/HanXB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MilyaevORBBA12,
author = {Nestor Milyaev and
David Osumi{-}Sutherland and
Simon Reeve and
Nicholas Burton and
Richard A. Baldock and
J. Douglas Armstrong},
title = {The Virtual Fly Brain browser and query interface},
journal = {Bioinform.},
volume = {28},
number = {3},
pages = {411--415},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/btr677},
doi = {10.1093/BIOINFORMATICS/BTR677},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MilyaevORBBA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuszBHMB12,
author = {Zsolt L. Husz and
Nicholas Burton and
Bill Hill and
Nestor Milyaev and
Richard A. Baldock},
title = {Web tools for large-scale 3D biological images and atlases},
journal = {{BMC} Bioinform.},
volume = {13},
pages = {122},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-122},
doi = {10.1186/1471-2105-13-122},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuszBHMB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GubermanAA11,
author = {Jonathan M. Guberman and
Jiye Ai and
Olivier Arnaiz and
Joachim Baran and
Andrew Blake and
Richard A. Baldock and
Claude Chelala and
David Croft and
Anthony Cros and
Rosalind J. Cutts and
Alex Di G{\'{e}}nova and
Simon A. Forbes and
Takatomo Fujisawa and
Emanuela Gadaleta and
David M. Goodstein and
Gunes Gundem and
Bernard Haggarty and
Syed Haider and
Matthew Hall and
Todd W. Harris and
Robin Haw and
Shen Hu and
Simon J. Hubbard and
Jack Hsu and
Vivek Iyer and
Philip Jones and
Toshiaki Katayama and
Rhoda Kinsella and
Lei Kong and
Daniel Lawson and
Yong Liang and
N{\'{u}}ria L{\'{o}}pez{-}Bigas and
Jie Luo and
Michael J. Lush and
Jeremy C. Mason and
Fran{\c{c}}ois Moreews and
Nelson Ndegwa and
Darren J. Oakley and
Christian Perez{-}Llamas and
Michael Primig and
Elena Rivkin and
Steven Rosanoff and
Rebecca Shepherd and
Reinhard Simon and
William C. Skarnes and
Damian Smedley and
Linda Sperling and
William Spooner and
Peter Stevenson and
Kevin R. Stone and
Jon W. Teague and
Jun Wang and
Jianxin Wang and
Brett Whitty and
David Tai Wai Wong and
Marie Wong{-}Erasmus and
Long Yao and
Ken Youens{-}Clark and
Christina K. Yung and
Junjun Zhang and
Arek Kasprzyk},
title = {BioMart Central Portal: an open database network for the biological
community},
journal = {Database J. Biol. Databases Curation},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1093/database/bar041},
doi = {10.1093/DATABASE/BAR041},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GubermanAA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/StevensonRVYB11,
author = {Peter Stevenson and
Lorna J. Richardson and
Shanmugasundaram Venkataraman and
Yiya Yang and
Richard A. Baldock},
title = {The BioMart interface to the eMouseAtlas gene expression database
{EMAGE}},
journal = {Database J. Biol. Databases Curation},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1093/database/bar029},
doi = {10.1093/DATABASE/BAR029},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/StevensonRVYB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanHB11,
author = {Liangxiu Han and
Jano I. van Hemert and
Richard A. Baldock},
title = {Automatically identifying and annotating mouse embryo gene expression
patterns},
journal = {Bioinform.},
volume = {27},
number = {8},
pages = {1101--1107},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr105},
doi = {10.1093/BIOINFORMATICS/BTR105},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanHB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RingwaldIMSTKBEOBSMSLHBHS11,
author = {Martin Ringwald and
Vivek Iyer and
Jeremy C. Mason and
Kevin R. Stone and
Hamsa D. Tadepally and
James A. Kadin and
Carol J. Bult and
Janan T. Eppig and
Darren J. Oakley and
Sebastien Briois and
Elia Stupka and
Vincenza Maselli and
Damian Smedley and
Songyan Liu and
Jens Hansen and
Richard A. Baldock and
Geoffrey G. Hicks and
William C. Skarnes},
title = {The {IKMC} web portal: a central point of entry to data and resources
from the International Knockout Mouse Consortium},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Database-Issue},
pages = {849--855},
year = {2011},
url = {https://doi.org/10.1093/nar/gkq879},
doi = {10.1093/NAR/GKQ879},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/RingwaldIMSTKBEOBSMSLHBHS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HawrylyczBBHJMNLLNPRVZB11,
author = {Michael Hawrylycz and
Richard A. Baldock and
Albert Burger and
Tsutomu Hashikawa and
G. Allan Johnson and
Maryann E. Martone and
Lydia Ng and
Christopher Lau and
Stephen D. Larson and
Jonathan Nissanov and
Luis Puelles and
Seth Ruffins and
Fons J. Verbeek and
Ilya Zaslavsky and
Jyl Boline},
title = {Digital Atlasing and Standardization in the Mouse Brain},
journal = {PLoS Comput. Biol.},
volume = {7},
number = {2},
year = {2011},
url = {https://doi.org/10.1371/journal.pcbi.1001065},
doi = {10.1371/JOURNAL.PCBI.1001065},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HawrylyczBBHJMNLLNPRVZB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RichardsonVSYBRFBDC10,
author = {Lorna J. Richardson and
Shanmugasundaram Venkataraman and
Peter Stevenson and
Yiya Yang and
Nicholas Burton and
Jianguo Rao and
Malcolm E. Fisher and
Richard A. Baldock and
Duncan Davidson and
Jeffrey H. Christiansen},
title = {{EMAGE} mouse embryo spatial gene expression database: 2010 update},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {703--709},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp763},
doi = {10.1093/NAR/GKP763},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RichardsonVSYBRFBDC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adma/HanHBA09,
author = {Liangxiu Han and
Jano I. van Hemert and
Richard A. Baldock and
Malcolm P. Atkinson},
editor = {Ronghuai Huang and
Qiang Yang and
Jian Pei and
Jo{\~{a}}o Gama and
Xiaofeng Meng and
Xue Li},
title = {Automating Gene Expression Annotation for Mouse Embryo},
booktitle = {Advanced Data Mining and Applications, 5th International Conference,
{ADMA} 2009, Beijing, China, August 17-19, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5678},
pages = {469--478},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-03348-3\_46},
doi = {10.1007/978-3-642-03348-3\_46},
timestamp = {Sun, 02 Oct 2022 15:53:57 +0200},
biburl = {https://dblp.org/rec/conf/adma/HanHBA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/BarkerHBA09,
author = {Adam Barker and
Jano I. van Hemert and
Richard A. Baldock and
Malcolm P. Atkinson},
editor = {Franck Cappello and
Cho{-}Li Wang and
Rajkumar Buyya},
title = {An E-infrastructure to Support Collaborative Embryo Research},
booktitle = {9th {IEEE/ACM} International Symposium on Cluster Computing and the
Grid, CCGrid 2009, Shanghai, China, 18-21 May 2009},
pages = {520--525},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CCGRID.2009.78},
doi = {10.1109/CCGRID.2009.78},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/BarkerHBA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/HuszPHB09,
author = {Zsolt L. Husz and
Thomas P. Perry and
Bill Hill and
Richard A. Baldock},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Yoshinori Kuno and
Junxian Wang and
Renato Pajarola and
Peter Lindstrom and
Andr{\'{e}} Hinkenjann and
L. Miguel Encarna{\c{c}}{\~{a}}o and
Cl{\'{a}}udio T. Silva and
Daniel S. Coming},
title = {Woolz {IIP:} {A} Tiled On-the-Fly Sectioning Server for 3D Volumetric
Atlases},
booktitle = {Advances in Visual Computing, 5th International Symposium, {ISVC}
2009, Las Vegas, NV, USA, November 30 - December 2, 2009, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5875},
pages = {924--933},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-10331-5\_86},
doi = {10.1007/978-3-642-10331-5\_86},
timestamp = {Wed, 04 May 2022 07:33:36 +0200},
biburl = {https://dblp.org/rec/conf/isvc/HuszPHB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0901-2310,
author = {Adam Barker and
Jano I. van Hemert and
Richard A. Baldock and
Malcolm P. Atkinson},
title = {An e-Infrastructure for Collaborative Research in Human Embryo Development},
journal = {CoRR},
volume = {abs/0901.2310},
year = {2009},
url = {http://arxiv.org/abs/0901.2310},
eprinttype = {arXiv},
eprint = {0901.2310},
timestamp = {Wed, 11 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0901-2310.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VenkataramanSYRBPSBDC08,
author = {Shanmugasundaram Venkataraman and
Peter Stevenson and
Yiya Yang and
Lorna J. Richardson and
Nicholas Burton and
Thomas P. Perry and
Paul Smith and
Richard A. Baldock and
Duncan Davidson and
Jeffrey H. Christiansen},
title = {{EMAGE} - Edinburgh Mouse Atlas of Gene Expression: 2008 update},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {860--865},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm938},
doi = {10.1093/NAR/GKM938},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/VenkataramanSYRBPSBDC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bird/HemertB08,
author = {Jano I. van Hemert and
Richard A. Baldock},
editor = {Mourad Elloumi and
Josef K{\"{u}}ng and
Michal Linial and
Robert F. Murphy and
Kristan Schneider and
Cristian Toma},
title = {Matching Spatial Regions with Combinations of Interacting Gene Expression
Patterns},
booktitle = {Bioinformatics Research and Development, Second International Conference,
{BIRD} 2008, Vienna, Austria, July 7-9, 2008, Proceedings},
series = {Communications in Computer and Information Science},
volume = {13},
pages = {347--361},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-70600-7\_26},
doi = {10.1007/978-3-540-70600-7\_26},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bird/HemertB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/cb/BaldockB08,
author = {Richard A. Baldock and
Albert Burger},
editor = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {Anatomical Ontologies: Linking Names to Places in Biology},
booktitle = {Anatomy Ontologies for Bioinformatics, Principles and Practice},
series = {Computational Biology},
volume = {6},
pages = {197--211},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-1-84628-885-2\_10},
doi = {10.1007/978-1-84628-885-2\_10},
timestamp = {Thu, 13 Jun 2019 09:41:49 +0200},
biburl = {https://dblp.org/rec/series/cb/BaldockB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/cb/BaldockD08,
author = {Richard A. Baldock and
Duncan Davidson},
editor = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {The Edinburgh Mouse Atlas},
booktitle = {Anatomy Ontologies for Bioinformatics, Principles and Practice},
series = {Computational Biology},
volume = {6},
pages = {249--265},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-1-84628-885-2\_12},
doi = {10.1007/978-1-84628-885-2\_12},
timestamp = {Thu, 13 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/series/cb/BaldockD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:series/cb/6,
editor = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {Anatomy Ontologies for Bioinformatics, Principles and Practice},
series = {Computational Biology},
volume = {6},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-1-84628-885-2},
doi = {10.1007/978-1-84628-885-2},
isbn = {978-1-84628-884-5},
timestamp = {Thu, 13 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/series/cb/6.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bird/HemertB07,
author = {Jano I. van Hemert and
Richard A. Baldock},
editor = {Sepp Hochreiter and
Roland Wagner},
title = {Mining Spatial Gene Expression Data for Association Rules},
booktitle = {Bioinformatics Research and Development, First International Conference,
{BIRD} 2007, Berlin, Germany, March 12-14, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4414},
pages = {66--76},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-71233-6\_6},
doi = {10.1007/978-3-540-71233-6\_6},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bird/HemertB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthgrid/UrePMPLLJBPLRBM07,
author = {Jenny Ure and
Rob Procter and
Maryann E. Martone and
David Porteous and
Sharon Lloyd and
Stephen M. Lawrie and
Dominic Job and
Richard A. Baldock and
Alistair Philp and
Dave Liewald and
Frank Rakebrandt and
Alan Blaikie and
Clare McKay and
Stuart Anderson and
John D. Ainsworth and
Jano I. van Hemert and
Ignacio Blanquer and
Richard O. Sinnott and
Christian Barillot and
Bernard Gibaud and
Alan R. Williams and
Mark Hartswood and
Paul Watson and
Leslie Smith and
Albert Burger and
Jessie B. Kennedy and
Horacio Gonz{\'{a}}lez{-}V{\'{e}}lez and
Robert Stevens and
{\'{O}}scar Corcho and
Robin Morton and
Pamela Linksted and
Mylene Deschenes and
Mark M. McGilchrist and
Paul Johnson and
Alex Voss and
Renate Gertz and
Joanna M. Wardlaw},
editor = {Nicolas Jacq and
Henning M{\"{u}}ller and
Ignacio Blanquer and
Yannick Legr{\'{e}} and
Vincent Breton and
Dominique Hausser and
Vicente Hern{\'{a}}ndez and
Tony Solomonides and
Martin Hofmann{-}Apitius},
title = {Data Integration in eHealth: {A} Domain/Disease Specific Roadmap},
booktitle = {From Genes to Personalized HealthCare: Grid Solutions for the Life
Sciences - Proceedings of HealthGrid 2007, Geneva, Switzerland, April
24-27, 2007},
series = {Studies in Health Technology and Informatics},
volume = {126},
pages = {144--153},
publisher = {{IOS} Press},
year = {2007},
url = {http://www.booksonline.iospress.nl/Content/View.aspx?piid=5561},
timestamp = {Mon, 26 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/healthgrid/UrePMPLLJBPLRBM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChristiansenYVRSBBD06,
author = {Jeffrey H. Christiansen and
Yiya Yang and
Shanmugasundaram Venkataraman and
Lorna J. Richardson and
Peter Stevenson and
Nicholas Burton and
Richard A. Baldock and
Duncan Davidson},
title = {{EMAGE:} a spatial database of gene expression patterns during mouse
embryo development},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {637--641},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj006},
doi = {10.1093/NAR/GKJ006},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChristiansenYVRSBBD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KarasavvasBB05,
author = {Konstantinos Karasavvas and
Richard A. Baldock and
Albert Burger},
title = {A criticality-based framework for task composition in multi-agent
bioinformatics integration systems},
journal = {Bioinform.},
volume = {21},
number = {14},
pages = {3155--3163},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti491},
doi = {10.1093/BIOINFORMATICS/BTI491},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KarasavvasBB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FengBHDKSLB05,
author = {Guangjie Feng and
Nick Burton and
Bill Hill and
Duncan Davidson and
Janet Kerwin and
Mark Scott and
Susan Lindsay and
Richard A. Baldock},
title = {JAtlasView: a Java atlas-viewer for browsing biomedical 3D images
and atlases},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {47},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-47},
doi = {10.1186/1471-2105-6-47},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FengBHDKSLB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BurgerDB04,
author = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {Formalization of mouse embryo anatomy},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {259--267},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg400},
doi = {10.1093/BIOINFORMATICS/BTG400},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BurgerDB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BurgerDYB04,
author = {Albert Burger and
Duncan Davidson and
Yiya Yang and
Richard A. Baldock},
title = {Integrating partonomic hierarchies in anatomy ontologies},
journal = {{BMC} Bioinform.},
volume = {5},
pages = {184},
year = {2004},
url = {https://doi.org/10.1186/1471-2105-5-184},
doi = {10.1186/1471-2105-5-184},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BurgerDYB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/KarasavvasBB04,
author = {Konstantinos Karasavvas and
Richard A. Baldock and
Albert Burger},
title = {Bioinformatics integration and agent technology},
journal = {J. Biomed. Informatics},
volume = {37},
number = {3},
pages = {205--219},
year = {2004},
url = {https://doi.org/10.1016/j.jbi.2004.04.003},
doi = {10.1016/J.JBI.2004.04.003},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/KarasavvasBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/LiakosBB04,
author = {Konstantinos Liakos and
Albert Burger and
Richard A. Baldock},
title = {A scalable mediator approach to process large biomedical 3-D images},
journal = {{IEEE} Trans. Inf. Technol. Biomed.},
volume = {8},
number = {3},
pages = {354--359},
year = {2004},
url = {https://doi.org/10.1109/TITB.2004.834374},
doi = {10.1109/TITB.2004.834374},
timestamp = {Wed, 13 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/titb/LiakosBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ChenPBHAEHBH04,
author = {Chaoquan Chen and
Tamie Poepping and
Jason Beech{-}Brandt and
Steven Hammer and
Paul Allan and
William Easson and
Peter Hoskins and
Richard A. Baldock and
Bill Hill},
title = {Segmentation of Arterial Geometry From Ultrasound Images Using Balloon
Models},
booktitle = {Proceedings of the 2004 {IEEE} International Symposium on Biomedical
Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004},
pages = {1319--1322},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/ISBI.2004.1398789},
doi = {10.1109/ISBI.2004.1398789},
timestamp = {Wed, 04 Oct 2023 16:23:55 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ChenPBHAEHBH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/vecpar/LiakosBB04,
author = {Konstantinos Liakos and
Albert Burger and
Richard A. Baldock},
editor = {Michel J. Dayd{\'{e}} and
Jack J. Dongarra and
Vicente Hern{\'{a}}ndez and
Jos{\'{e}} M. Laginha M. Palma},
title = {Distributed Processing of Large BioMedical 3D Images},
booktitle = {High Performance Computing for Computational Science - {VECPAR} 2004,
6th International Conference, Valencia, Spain, June 28-30, 2004, Revised
Selected and Invited Papers},
series = {Lecture Notes in Computer Science},
volume = {3402},
pages = {142--155},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/11403937\_12},
doi = {10.1007/11403937\_12},
timestamp = {Tue, 14 May 2019 10:00:36 +0200},
biburl = {https://dblp.org/rec/conf/vecpar/LiakosBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/BaldockBBBCFHHKRSRSVWYD03,
author = {Richard A. Baldock and
Jonathan Bard and
Albert Burger and
Nicholas Burton and
Jeffrey H. Christiansen and
Guangjie Feng and
Bill Hill and
Derek Houghton and
Matthew Kaufman and
Jianguo Rao and
James Sharpe and
Allyson Ross and
Peter Stevenson and
Shanmugasundaram Venkataraman and
Andrew M. Waterhouse and
Yiya Yang and
Duncan Davidson},
title = {{EMAP} and {EMAGE} - {A} framework for understanding spatially organized
data},
journal = {Neuroinformatics},
volume = {1},
number = {4},
pages = {309--325},
year = {2003},
url = {https://doi.org/10.1385/NI:1:4:309},
doi = {10.1385/NI:1:4:309},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ni/BaldockBBBCFHHKRSRSVWYD03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/atal/KarasavvasBB02,
author = {Konstantinos Karasavvas and
Richard A. Baldock and
Albert Burger},
title = {A multi-agent bioinformatics integration system with adjustable autonomy:
an overview},
booktitle = {The First International Joint Conference on Autonomous Agents {\&}
Multiagent Systems, {AAMAS} 2002, July 15-19, 2002, Bologna, Italy,
Proceedings},
pages = {302--303},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/544741.544810},
doi = {10.1145/544741.544810},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/atal/KarasavvasBB02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/BaxterHBHS02,
author = {Robert M. Baxter and
Neil P. Chue Hong and
Richard A. Baldock and
Bill Hill and
James Sharpe},
title = {Bringing the Grid to the Biomedical Workbench},
booktitle = {11th {IEEE} International Symposium on High Performance Distributed
Computing {(HPDC-11} 2002), 23-26 July 2002, Edinburgh, Scotland,
{UK}},
pages = {417},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/HPDC.2002.1029947},
doi = {10.1109/HPDC.2002.1029947},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpdc/BaxterHBHS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pricai/KarasavvasBB02,
author = {Konstantinos Karasavvas and
Albert Burger and
Richard A. Baldock},
editor = {Mitsuru Ishizuka and
Abdul Sattar},
title = {A Multi-agent Bioinformatics Integration System with Adjustable Autonomy},
booktitle = {{PRICAI} 2002: Trends in Artificial Intelligence, 7th Pacific Rim
International Conference on Artificial Intelligence, Tokyo, Japan,
August 18-22, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2417},
pages = {492--501},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45683-X\_53},
doi = {10.1007/3-540-45683-X\_53},
timestamp = {Tue, 14 May 2019 10:00:46 +0200},
biburl = {https://dblp.org/rec/conf/pricai/KarasavvasBB02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/BurgerBYWHBD02,
author = {Albert Burger and
Richard A. Baldock and
Yiya Yang and
Andrew M. Waterhouse and
Derek Houghton and
Nick Burton and
Duncan Davidson},
title = {The Edinburgh Mouse Atlas and Gene-Expression Database: {A} Spatio-Temporal
Database for Biological Research},
booktitle = {Proceedings of the 14th International Conference on Scientific and
Statistical Database Management, July 24-26, 2002, Edinburgh, Scotland,
{UK}},
pages = {239},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/SSDM.2002.1029726},
doi = {10.1109/SSDM.2002.1029726},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/BurgerBYWHBD02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BaldockBBHKOSSWYD01,
author = {Richard A. Baldock and
Jonathan Bard and
Roberto Brunelli and
Bill Hill and
Matthew Kaufman and
Kristie Opstad and
David Smith and
Margaret Stark and
Andrew M. Waterhouse and
Yiya Yang and
Duncan Davidson},
title = {The Edinburgh Mouse Atlas: Using the {CD}},
journal = {Briefings Bioinform.},
volume = {2},
number = {2},
pages = {159--169},
year = {2001},
url = {https://doi.org/10.1093/bib/2.2.159},
doi = {10.1093/BIB/2.2.159},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BaldockBBHKOSSWYD01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pami/GuestBBFS01,
author = {Elizabeth Guest and
Elizabeth Berry and
Richard A. Baldock and
M{\'{a}}rta Fidrich and
Mike A. Smith},
title = {Robust Point Correspondence Applied to Two-and Three-Dimensional Image
Registration},
journal = {{IEEE} Trans. Pattern Anal. Mach. Intell.},
volume = {23},
number = {2},
pages = {165--179},
year = {2001},
url = {https://doi.org/10.1109/34.908967},
doi = {10.1109/34.908967},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pami/GuestBBFS01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ivc/Baldock92,
author = {Richard A. Baldock},
title = {Trainable models for the interpretation of biomedical images},
journal = {Image Vis. Comput.},
volume = {10},
number = {6},
pages = {444--449},
year = {1992},
url = {https://doi.org/10.1016/0262-8856(92)90029-3},
doi = {10.1016/0262-8856(92)90029-3},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ivc/Baldock92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/Baldock91,
author = {Richard A. Baldock},
editor = {Alan C. F. Colchester and
David J. Hawkes},
title = {Trainable Models for the Interpretation of Echocardiogram Images},
booktitle = {Information Processing in Medical Imaging, 12th International Conference,
IPMI'91, Wye, UK, July 7-12, 1991, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {511},
pages = {408--418},
publisher = {Springer},
year = {1991},
url = {https://doi.org/10.1007/BFb0033769},
doi = {10.1007/BFB0033769},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/ipmi/Baldock91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/par/BaldockT88,
author = {Richard A. Baldock and
Simon J. Towers},
editor = {Josef Kittler},
title = {First Steps Towards a Blackboard Controlled System for Matching Image
and Model in the Presence of Noise and Distortion},
booktitle = {Pattern Recognition, {BPRA} 4th International Conference, Cambridge,
UK, March 28-30, 1988, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {301},
pages = {429--438},
publisher = {Springer},
year = {1988},
url = {https://doi.org/10.1007/3-540-19036-8\_43},
doi = {10.1007/3-540-19036-8\_43},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/par/BaldockT88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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