BibTeX records: Vladimir B. Bajic

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@article{DBLP:journals/ijet/KasianovGBGG21,
  author       = {Artem S. Kasianov and
                  Elena Gafarova and
                  Vladimir B. Bajic and
                  Maxim Gafarov and
                  Darya Gordeeva},
  title        = {Machine Learning Methods and Qualimetric Approach to Determine the
                  Conditions for Train Students in the Field of Environmental and Economic
                  Activities},
  journal      = {Int. J. Emerg. Technol. Learn.},
  volume       = {16},
  number       = {3},
  year         = {2021},
  url          = {https://doi.org/10.3991/ijet.v16i03.17715},
  doi          = {10.3991/IJET.V16I03.17715},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijet/KasianovGBGG21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/ThafarOABGEG21,
  author       = {Maha A. Thafar and
                  Rawan S. Olayan and
                  Somayah Albaradei and
                  Vladimir B. Bajic and
                  Takashi Gojobori and
                  Magbubah Essack and
                  Xin Gao},
  title        = {DTi2Vec: Drug-target interaction prediction using network embedding
                  and ensemble learning},
  journal      = {J. Cheminformatics},
  volume       = {13},
  number       = {1},
  pages        = {71},
  year         = {2021},
  url          = {https://doi.org/10.1186/s13321-021-00552-w},
  doi          = {10.1186/S13321-021-00552-W},
  timestamp    = {Tue, 16 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcheminf/ThafarOABGEG21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/AlbaradeiNUTNEB20,
  author       = {Somayah Albaradei and
                  Francesco Napolitano and
                  Mahmut Uludag and
                  Maha A. Thafar and
                  Sara Napolitano and
                  Magbubah Essack and
                  Vladimir B. Bajic and
                  Xin Gao},
  title        = {Automated Counting of Colony Forming Units Using Deep Transfer Learning
                  From a Model for Congested Scenes Analysis},
  journal      = {{IEEE} Access},
  volume       = {8},
  pages        = {164340--164346},
  year         = {2020},
  url          = {https://doi.org/10.1109/ACCESS.2020.3021656},
  doi          = {10.1109/ACCESS.2020.3021656},
  timestamp    = {Fri, 13 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/access/AlbaradeiNUTNEB20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlamANHMAHWCHAM20,
  author       = {Tanvir Alam and
                  Meshari Alazmi and
                  Rayan Naser and
                  Franceline Huser and
                  Afaque A. Momin and
                  Veronica Astro and
                  SeungBeom Hong and
                  Katarzyna W. Walkiewicz and
                  Christian G. Canlas and
                  Rapha{\"{e}}l Huser and
                  Amal J. Ali and
                  Jasmeen Merzaban and
                  Antonio Adamo and
                  Mariusz Jaremko and
                  Lukasz Jaremko and
                  Vladimir B. Bajic and
                  Xin Gao and
                  Stefan T. Arold},
  title        = {Proteome-level assessment of origin, prevalence and function of leucine-aspartic
                  acid {(LD)} motifs},
  journal      = {Bioinform.},
  volume       = {36},
  number       = {4},
  pages        = {1121--1128},
  year         = {2020},
  url          = {https://doi.org/10.1093/bioinformatics/btz703},
  doi          = {10.1093/BIOINFORMATICS/BTZ703},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/AlamANHMAHWCHAM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/ThafarOAABGGE20,
  author       = {Maha A. Thafar and
                  Rawan S. Olayan and
                  Haitham Ashoor and
                  Somayah Albaradei and
                  Vladimir B. Bajic and
                  Xin Gao and
                  Takashi Gojobori and
                  Magbubah Essack},
  title        = {DTiGEMS+: drug-target interaction prediction using graph embedding,
                  graph mining, and similarity-based techniques},
  journal      = {J. Cheminformatics},
  volume       = {12},
  number       = {1},
  pages        = {44},
  year         = {2020},
  url          = {https://doi.org/10.1186/s13321-020-00447-2},
  doi          = {10.1186/S13321-020-00447-2},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcheminf/ThafarOAABGGE20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbbb/ThafarAOAEB20,
  author       = {Maha A. Thafar and
                  Somayah Albaradei and
                  Rawan S. Olayan and
                  Haitham Ashoor and
                  Magbubah Essack and
                  Vladimir B. Bajic},
  title        = {Computational Drug-target Interaction Prediction based on Graph Embedding
                  and Graph Mining},
  booktitle    = {{ICBBB} 2020: 10th International Conference on Bioscience, Biochemistry
                  and Bioinformatics, Kyoto, Japan, January, 2020},
  pages        = {14--21},
  publisher    = {{ACM}},
  year         = {2020},
  url          = {https://doi.org/10.1145/3386052.3386062},
  doi          = {10.1145/3386052.3386062},
  timestamp    = {Sun, 17 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icbbb/ThafarAOAEB20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KalkatawiMJB19,
  author       = {Manal Kalkatawi and
                  Arturo Magana{-}Mora and
                  Boris R. Jankovic and
                  Vladimir B. Bajic},
  title        = {DeepGSR: an optimized deep-learning structure for the recognition
                  of genomic signals and regions},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {7},
  pages        = {1125--1132},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/bty752},
  doi          = {10.1093/BIOINFORMATICS/BTY752},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KalkatawiMJB19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangYLYWXCBWABM19,
  author       = {Guangyu Wang and
                  Hongyan Yin and
                  Boyang Li and
                  Chunlei Yu and
                  Fan Wang and
                  Xingjian Xu and
                  Jiabao Cao and
                  Yiming Bao and
                  Liguo Wang and
                  Amir Ali Abbasi and
                  Vladimir B. Bajic and
                  Lina Ma and
                  Zhang Zhang},
  title        = {Characterization and identification of long non-coding RNAs based
                  on feature relationship},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {17},
  pages        = {2949--2956},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/btz008},
  doi          = {10.1093/BIOINFORMATICS/BTZ008},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangYLYWXCBWABM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaCLDLZBZ19,
  author       = {Lina Ma and
                  Jiabao Cao and
                  Lin Liu and
                  Qiang Du and
                  Zhao Li and
                  Dong Zou and
                  Vladimir B. Bajic and
                  Zhang Zhang},
  title        = {LncBook: a curated knowledgebase of human long non-coding RNAs},
  journal      = {Nucleic Acids Res.},
  volume       = {47},
  number       = {Database-Issue},
  pages        = {D128--D134},
  year         = {2019},
  url          = {https://doi.org/10.1093/nar/gky960},
  doi          = {10.1093/NAR/GKY960},
  timestamp    = {Mon, 03 Jan 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/MaCLDLZBZ19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbra/AlbaradeiTNEB19,
  author       = {Somayah Albaradei and
                  Maha A. Thafar and
                  Christophe Van Neste and
                  Magbubah Essack and
                  Vladimir B. Bajic},
  title        = {Metastatic State of Colorectal Cancer can be Accurately Predicted
                  with Methylome},
  booktitle    = {{ICBRA} '19: 6th International Conference on Bioinformatics Research
                  and Applications, Seoul, Republic of Korea, December, 2019},
  pages        = {125--130},
  publisher    = {{ACM}},
  year         = {2019},
  url          = {https://doi.org/10.1145/3383783.3383792},
  doi          = {10.1145/3383783.3383792},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icbra/AlbaradeiTNEB19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OlayanAB18,
  author       = {Rawan S. Olayan and
                  Haitham Ashoor and
                  Vladimir B. Bajic},
  title        = {{DDR:} efficient computational method to predict drug-target interactions
                  using graph mining and machine learning approaches},
  journal      = {Bioinform.},
  volume       = {34},
  number       = {7},
  pages        = {1164--1173},
  year         = {2018},
  url          = {https://doi.org/10.1093/bioinformatics/btx731},
  doi          = {10.1093/BIOINFORMATICS/BTX731},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/OlayanAB18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OlayanAB18a,
  author       = {Rawan S. Olayan and
                  Haitham Ashoor and
                  Vladimir B. Bajic},
  title        = {{DDR:} efficient computational method to predict drug-target interactions
                  using graph mining and machine learning approaches},
  journal      = {Bioinform.},
  volume       = {34},
  number       = {21},
  pages        = {3779},
  year         = {2018},
  url          = {https://doi.org/10.1093/bioinformatics/bty417},
  doi          = {10.1093/BIOINFORMATICS/BTY417},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/OlayanAB18a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/KleftogiannisAB18,
  author       = {Dimitrios Kleftogiannis and
                  Haitham Ashoor and
                  Vladimir B. Bajic},
  title        = {{TELS:} {A} Novel Computational Framework for Identifying Motif Signatures
                  of Transcribed Enhancers},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {16},
  number       = {5},
  pages        = {332--341},
  year         = {2018},
  url          = {https://doi.org/10.1016/j.gpb.2018.05.003},
  doi          = {10.1016/J.GPB.2018.05.003},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/gpb/KleftogiannisAB18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KulakovskiyVYSF18,
  author       = {Ivan V. Kulakovskiy and
                  Ilya E. Vorontsov and
                  Ivan S. Yevshin and
                  Ruslan N. Sharipov and
                  Alla D. Fedorova and
                  Eugene I. Rumynskiy and
                  Yulia A. Medvedeva and
                  Arturo Magana{-}Mora and
                  Vladimir B. Bajic and
                  Dmitri A. Papatsenko and
                  Fedor A. Kolpakov and
                  Vsevolod J. Makeev},
  title        = {{HOCOMOCO:} towards a complete collection of transcription factor
                  binding models for human and mouse via large-scale ChIP-Seq analysis},
  journal      = {Nucleic Acids Res.},
  volume       = {46},
  number       = {Database-Issue},
  pages        = {D252--D259},
  year         = {2018},
  url          = {https://doi.org/10.1093/nar/gkx1106},
  doi          = {10.1093/NAR/GKX1106},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KulakovskiyVYSF18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BaillieBHCGNBST18,
  author       = {J. Kenneth Baillie and
                  Andrew Bretherick and
                  Christopher S. Haley and
                  Sara Clohisey and
                  Alan Gray and
                  Lucile P. A. Neyton and
                  Jeffrey Barrett and
                  Eli A. Stahl and
                  Albert Tenesa and
                  Robin Andersson and
                  J. Ben Brown and
                  Geoffrey J. Faulkner and
                  Marina Lizio and
                  Ulf Schaefer and
                  Carsten O. Daub and
                  Masayoshi Itoh and
                  Naoto Kondo and
                  Timo Lassmann and
                  Jun Kawai and
                  IIBDGC Consortium and
                  Damian Mole and
                  Vladimir B. Bajic and
                  Peter Heutink and
                  Michael Rehli and
                  Hideya Kawaji and
                  Albin Sandelin and
                  Harukazu Suzuki and
                  Jack Satsangi and
                  Christine A. Wells and
                  Nir Hacohen and
                  Tom C. Freeman and
                  Yoshihide Hayashizaki and
                  Piero Carninci and
                  Alistair R. R. Forrest and
                  David A. Hume},
  title        = {Shared activity patterns arising at genetic susceptibility loci reveal
                  underlying genomic and cellular architecture of human disease},
  journal      = {PLoS Comput. Biol.},
  volume       = {14},
  number       = {3},
  year         = {2018},
  url          = {https://doi.org/10.1371/journal.pcbi.1005934},
  doi          = {10.1371/JOURNAL.PCBI.1005934},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BaillieBHCGNBST18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShahmuradovRBRB17,
  author       = {Ilham A. Shahmuradov and
                  Rozaimi Mohamad Razali and
                  Salim Bougouffa and
                  Aleksandar Radovanovic and
                  Vladimir B. Bajic},
  title        = {bTSSfinder: a novel tool for the prediction of promoters in cyanobacteria
                  and Escherichia coli},
  journal      = {Bioinform.},
  volume       = {33},
  number       = {3},
  pages        = {334--340},
  year         = {2017},
  url          = {https://doi.org/10.1093/bioinformatics/btw629},
  doi          = {10.1093/BIOINFORMATICS/BTW629},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ShahmuradovRBRB17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchmeierAEB17,
  author       = {Sebastian Schmeier and
                  Tanvir Alam and
                  Magbubah Essack and
                  Vladimir B. Bajic},
  title        = {TcoF-DB v2: update of the database of human and mouse transcription
                  co-factors and transcription factor interactions},
  journal      = {Nucleic Acids Res.},
  volume       = {45},
  number       = {Database-Issue},
  pages        = {D145--D150},
  year         = {2017},
  url          = {https://doi.org/10.1093/nar/gkw1007},
  doi          = {10.1093/NAR/GKW1007},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SchmeierAEB17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerj-cs/AlshahraniSMB17,
  author       = {Mona Alshahrani and
                  Othman Soufan and
                  Arturo Magana{-}Mora and
                  Vladimir B. Bajic},
  title        = {{DANNP:} an efficient artificial neural network pruning tool},
  journal      = {PeerJ Comput. Sci.},
  volume       = {3},
  pages        = {e137},
  year         = {2017},
  url          = {https://doi.org/10.7717/peerj-cs.137},
  doi          = {10.7717/PEERJ-CS.137},
  timestamp    = {Mon, 18 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerj-cs/AlshahraniSMB17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BoudelliouaRKHB17,
  author       = {Imane Boudellioua and
                  Rozaimi B. Mahamad Razali and
                  Maxat Kulmanov and
                  Yasmeen Hashish and
                  Vladimir B. Bajic and
                  Eva Goncalves{-}Serra and
                  Nadia Schoenmakers and
                  Georgios V. Gkoutos and
                  Paul N. Schofield and
                  Robert Hoehndorf},
  title        = {Semantic prioritization of novel causative genomic variants},
  journal      = {PLoS Comput. Biol.},
  volume       = {13},
  number       = {4},
  year         = {2017},
  url          = {https://doi.org/10.1371/journal.pcbi.1005500},
  doi          = {10.1371/JOURNAL.PCBI.1005500},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BoudelliouaRKHB17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KleftogiannisKB16,
  author       = {Dimitrios Kleftogiannis and
                  Panos Kalnis and
                  Vladimir B. Bajic},
  title        = {Progress and challenges in bioinformatics approaches for enhancer
                  identification},
  journal      = {Briefings Bioinform.},
  volume       = {17},
  number       = {6},
  pages        = {967--979},
  year         = {2016},
  url          = {https://doi.org/10.1093/bib/bbv101},
  doi          = {10.1093/BIB/BBV101},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/KleftogiannisKB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/Ba-alawiSEKB16,
  author       = {Wail Ba{-}alawi and
                  Othman Soufan and
                  Magbubah Essack and
                  Panos Kalnis and
                  Vladimir B. Bajic},
  title        = {DASPfind: new efficient method to predict drug-target interactions},
  journal      = {J. Cheminformatics},
  volume       = {8},
  number       = {1},
  pages        = {15:1--15:9},
  year         = {2016},
  url          = {https://doi.org/10.1186/s13321-016-0128-4},
  doi          = {10.1186/S13321-016-0128-4},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcheminf/Ba-alawiSEKB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/SoufanBAEKB16,
  author       = {Othman Soufan and
                  Wail Ba{-}alawi and
                  Moataz Afeef and
                  Magbubah Essack and
                  Panos Kalnis and
                  Vladimir B. Bajic},
  title        = {{DRABAL:} novel method to mine large high-throughput screening assays
                  using Bayesian active learning},
  journal      = {J. Cheminformatics},
  volume       = {8},
  number       = {1},
  pages        = {64:1--64:14},
  year         = {2016},
  url          = {https://doi.org/10.1186/s13321-016-0177-8},
  doi          = {10.1186/S13321-016-0177-8},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcheminf/SoufanBAEKB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KulakovskiyVYSK16,
  author       = {Ivan V. Kulakovskiy and
                  Ilya E. Vorontsov and
                  Ivan S. Yevshin and
                  Anastasiia V. Soboleva and
                  Artem S. Kasianov and
                  Haitham Ashoor and
                  Wail Ba{-}alawi and
                  Vladimir B. Bajic and
                  Yulia A. Medvedeva and
                  Fedor A. Kolpakov and
                  Vsevolod J. Makeev},
  title        = {{HOCOMOCO:} expansion and enhancement of the collection of transcription
                  factor binding sites models},
  journal      = {Nucleic Acids Res.},
  volume       = {44},
  number       = {Database-Issue},
  pages        = {116--125},
  year         = {2016},
  url          = {https://doi.org/10.1093/nar/gkv1249},
  doi          = {10.1093/NAR/GKV1249},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KulakovskiyVYSK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SalhiERMBASLMBM16,
  author       = {Adil Salhi and
                  Magbubah Essack and
                  Aleksandar Radovanovic and
                  Benoit Marchand and
                  Salim Bougouffa and
                  Andr{\'{e}} Antunes and
                  Marta Filipa Sim{\~{o}}es and
                  Feras F. Lafi and
                  Olaa A. Motwalli and
                  Ameerah Bokhari and
                  Tariq Malas and
                  Soha Al Amoudi and
                  Ghofran Othum and
                  Intikhab Alam and
                  Katsuhiko Mineta and
                  Xin Gao and
                  Robert Hoehndorf and
                  John A. C. Archer and
                  Takashi Gojobori and
                  Vladimir B. Bajic},
  title        = {{DESM:} portal for microbial knowledge exploration systems},
  journal      = {Nucleic Acids Res.},
  volume       = {44},
  number       = {Database-Issue},
  pages        = {624--633},
  year         = {2016},
  url          = {https://doi.org/10.1093/nar/gkv1147},
  doi          = {10.1093/NAR/GKV1147},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SalhiERMBASLMBM16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AshoorKRB15,
  author       = {Haitham Ashoor and
                  Dimitrios Kleftogiannis and
                  Aleksandar Radovanovic and
                  Vladimir B. Bajic},
  title        = {DENdb: database of integrated human enhancers},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2015},
  year         = {2015},
  url          = {https://doi.org/10.1093/database/bav085},
  doi          = {10.1093/DATABASE/BAV085},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/AshoorKRB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KhamisEGB15,
  author       = {Abdullah M. Khamis and
                  Magbubah Essack and
                  Xin Gao and
                  Vladimir B. Bajic},
  title        = {Distinct profiling of antimicrobial peptide families},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {6},
  pages        = {849--856},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu738},
  doi          = {10.1093/BIOINFORMATICS/BTU738},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KhamisEGB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/ZhaoB15,
  author       = {Fangqing Zhao and
                  Vladimir B. Bajic},
  title        = {The Value and Significance of Metagenomics of Marine Environments},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {13},
  number       = {5},
  pages        = {271--274},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.gpb.2015.10.002},
  doi          = {10.1016/J.GPB.2015.10.002},
  timestamp    = {Thu, 20 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/gpb/ZhaoB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/AntunesASDFSEB15,
  author       = {Andr{\'{e}} Antunes and
                  Intikhab Alam and
                  Marta Filipa Sim{\~{o}}es and
                  Camille Daniels and
                  Ari J. S. Ferreira and
                  Rania Siam and
                  Hamza El{-}Dorry and
                  Vladimir B. Bajic},
  title        = {First Insights into the Viral Communities of the Deep-sea Anoxic Brines
                  of the Red Sea},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {13},
  number       = {5},
  pages        = {304--309},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.gpb.2015.06.004},
  doi          = {10.1016/J.GPB.2015.06.004},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/gpb/AntunesASDFSEB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/SimoesAOAAAMAB15,
  author       = {Marta Filipa Sim{\~{o}}es and
                  Andr{\'{e}} Antunes and
                  Cristiane A. Ottoni and
                  Mohammad Shoaib Amini and
                  Intikhab Alam and
                  Hanin Alzubaidy and
                  Noor{-}Azlin Mokhtar and
                  John A. C. Archer and
                  Vladimir B. Bajic},
  title        = {Soil and Rhizosphere Associated Fungi in Gray Mangroves (Avicennia
                  marina) from the Red Sea - {A} Metagenomic Approach},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {13},
  number       = {5},
  pages        = {310--320},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.gpb.2015.07.002},
  doi          = {10.1016/J.GPB.2015.07.002},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/gpb/SimoesAOAAAMAB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaLZXXYBZ15,
  author       = {Lina Ma and
                  Ang Li and
                  Dong Zou and
                  Xingjian Xu and
                  Lin Xia and
                  Jun Yu and
                  Vladimir B. Bajic and
                  Zhang Zhang},
  title        = {LncRNAWiki: harnessing community knowledge in collaborative curation
                  of human long non-coding RNAs},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {187--192},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gku1167},
  doi          = {10.1093/NAR/GKU1167},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/MaLZXXYBZ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RaiesMIB15,
  author       = {Arwa Bin Raies and
                  Hicham Mansour and
                  Roberto Incitti and
                  Vladimir B. Bajic},
  title        = {{DDMGD:} the database of text-mined associations between genes methylated
                  in diseases from different species},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {879--886},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gku1168},
  doi          = {10.1093/NAR/GKU1168},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/RaiesMIB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BougouffaREB14,
  author       = {Salim Bougouffa and
                  Aleksandar Radovanovic and
                  Magbubah Essack and
                  Vladimir B. Bajic},
  title        = {{DEOP:} a database on osmoprotectants and associated pathways},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2014},
  year         = {2014},
  url          = {https://doi.org/10.1093/database/bau100},
  doi          = {10.1093/DATABASE/BAU100},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/BougouffaREB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nature/ConsortiumFKRB14,
  author       = {The Fantom Consortium and
                  RIKEN PMII and
                  RIKEN CLST (DGT) and
                  Alistair R. R. Forrest and
                  Hideya Kawaji and
                  Michael Rehli and
                  J. Kenneth Baillie and
                  Michiel J. L. de Hoon and
                  Vanja Haberle and
                  Timo Lassmann and
                  Ivan V. Kulakovskiy and
                  Marina Lizio and
                  Masayoshi Itoh and
                  Robin Andersson and
                  Christopher J. Mungall and
                  Terrence F. Meehan and
                  Sebastian Schmeier and
                  Nicolas Bertin and
                  Mette J{\o}rgensen and
                  Emmanuel Dimont and
                  Erik Arner and
                  Christian Schmidl and
                  Ulf Schaefer and
                  Yulia A. Medvedeva and
                  Charles Plessy and
                  Morana Vitezic and
                  Jessica Severin and
                  Colin A. M. Semple and
                  Yuri Ishizu and
                  Robert S. Young and
                  Margherita Francescatto and
                  Intikhab Alam and
                  Davide Albanese and
                  Gabriel M. Altschuler and
                  Takahiro Arakawa and
                  John A. C. Archer and
                  Peter Arner and
                  Magda Babina and
                  Sarah Rennie and
                  Piotr J. Balwierz and
                  Anthony G. Beckhouse and
                  Swati Pradhan{-}Bhatt and
                  Judith A. Blake and
                  Antje Blumenthal and
                  Beatrice Bodega and
                  Alessandro Bonetti and
                  James Briggs and
                  Frank Brombacher and
                  A. Maxwell Burroughs and
                  Andrea Califano and
                  Carlo V. Cannistraci and
                  Daniel Carbajo and
                  Yun Chen and
                  Marco Chierici and
                  Yari Ciani and
                  Hans Clevers and
                  Emiliano Dalla and
                  Carrie A. Davis and
                  Michael Detmar and
                  Alexander D. Diehl and
                  Taeko Dohi and
                  Finn Drabl{\o}s and
                  Albert S. B. Edge and
                  Matthias Edinger and
                  Karl Ekwall and
                  Mitsuhiro Endoh and
                  Hideki Enomoto and
                  Michela Fagiolini and
                  Lynsey Fairbairn and
                  Hai Fang and
                  Mary C. Farach{-}Carson and
                  Geoffrey J. Faulkner and
                  Alexander V. Favorov and
                  Malcolm E. Fisher and
                  Martin C. Frith and
                  Rie Fujita and
                  Shiro Fukuda and
                  Cesare Furlanello and
                  Masaaki Furuno and
                  Jun{-}ichi Furusawa and
                  Teunis B. Geijtenbeek and
                  Andrew P. Gibson and
                  Thomas R. Gingeras and
                  Daniel Goldowitz and
                  Julian Gough and
                  Sven Guhl and
                  Reto Guler and
                  Stefano Gustincich and
                  Thomas J. Ha and
                  Masahide Hamaguchi and
                  Mitsuko Hara and
                  Matthias Harbers and
                  Jayson Harshbarger and
                  Akira Hasegawa and
                  Yuki Hasegawa and
                  Takehiro Hashimoto and
                  Meenhard Herlyn and
                  Kelly J. Hitchens and
                  Shannan J. Ho Sui and
                  Oliver M. Hofmann and
                  Ilka Hoof and
                  Fumi Hori and
                  Lukasz Huminiecki and
                  Kei Iida and
                  Tomokatsu Ikawa and
                  Boris R. Jankovic and
                  Hui Jia and
                  Anagha Joshi and
                  Giuseppe Jurman and
                  Bogumil Kaczkowski and
                  Chieko Kai and
                  Kaoru Kaida and
                  Ai Kaiho and
                  Kazuhiro Kajiyama and
                  Mutsumi Kanamori{-}Katayama and
                  Artem S. Kasianov and
                  Takeya Kasukawa and
                  Shintaro Katayama and
                  Sachi Kato and
                  Shuji Kawaguchi and
                  Hiroshi Kawamoto and
                  Yuki I. Kawamura and
                  Tsugumi Kawashima and
                  Judith S. Kempfle and
                  Tony J. Kenna and
                  Juha Kere and
                  Levon M. Khachigian and
                  Toshio Kitamura and
                  S. Peter Klinken and
                  Alan J. Knox and
                  Miki Kojima and
                  Soichi Kojima and
                  Naoto Kondo and
                  Haruhiko Koseki and
                  Shigeo Koyasu and
                  Sarah Krampitz and
                  Atsutaka Kubosaki and
                  Andrew T. Kwon and
                  Jeroen F. J. Laros and
                  Weonju Lee and
                  Andreas Lennartsson and
                  Kang Li and
                  Berit Lilje and
                  Leonard Lipovich and
                  Alan Mackay{-}Sim and
                  Ri{-}ichiroh Manabe and
                  Jessica Cara Mar and
                  Benoit Marchand and
                  Anthony Mathelier and
                  Niklas Mejhert and
                  Alison M. Meynert and
                  Yosuke Mizuno and
                  David A. de Lima Morais and
                  Hiromasa Morikawa and
                  Mitsuru Morimoto and
                  Kazuyo Moro and
                  Efthymios Motakis and
                  Hozumi Motohashi and
                  Christine Mummery and
                  Mitsuyoshi Murata and
                  Sayaka Nagao{-}Sato and
                  Yutaka Nakachi and
                  Fumio Nakahara and
                  Toshiyuki Nakamura and
                  Yukio Nakamura and
                  Kenichi Nakazato and
                  Erik van Nimwegen and
                  Noriko Ninomiya and
                  Hiromi Nishiyori and
                  Shohei Noma and
                  Tadasuke Nozaki and
                  Soichi Ogishima and
                  Naganari Ohkura and
                  Hiroko Ohmiya and
                  Hiroshi Ohno and
                  Mitsuhiro Ohshima and
                  Mariko Okada{-}Hatakeyama and
                  Yasushi Okazaki and
                  Valerio Orlando and
                  Dmitry A. Ovchinnikov and
                  Arnab Pain and
                  Robert Passier and
                  Margaret Patrikakis and
                  Helena Persson and
                  Silvano Piazza and
                  James G. D. Prendergast and
                  Owen J. L. Rackham and
                  Jordan A. Ramilowski and
                  Mamoon Rashid and
                  Timothy Ravasi and
                  Patrizia Rizzu and
                  Marco Roncador and
                  Sugata Roy and
                  Morten B. Rye and
                  Eri Saijyo and
                  Antti Sajantila and
                  Akiko Saka and
                  Shimon Sakaguchi and
                  Mizuho Sakai and
                  Hiroki Sato and
                  Hironori Sato and
                  Suzana Savvi and
                  Alka Saxena and
                  Claudio Schneider and
                  Erik A. Schultes and
                  Gundula G. Schulze{-}Tanzil and
                  Anita Schwegmann and
                  Thierry Sengstag and
                  Guojun Sheng and
                  Hisashi Shimoji and
                  Yishai Shimoni and
                  Jay W. Shin and
                  Christophe Simon and
                  Daisuke Sugiyama and
                  Takaaki Sugiyama and
                  Masanori Suzuki and
                  Naoko Suzuki and
                  Rolf K. Swoboda and
                  Peter A. C. 't Hoen and
                  Michihira Tagami and
                  Naoko Takahashi and
                  Jun Takai and
                  Hiroshi Tanaka and
                  Hideki Tatsukawa and
                  Zuotian Tatum and
                  Mark Thompson and
                  Hiroo Toyoda and
                  Tetsuro Toyoda and
                  Eivind Valen and
                  Marc van de Wetering and
                  Linda M. van den Berg and
                  Roberto Verardo and
                  Dipti Vijayan and
                  Ilya E. Vorontsov and
                  Wyeth W. Wasserman and
                  Shoko Watanabe and
                  Christine A. Wells and
                  Louise N. Winteringham and
                  Ernst Wolvetang and
                  Emily J. Wood and
                  Yoko Yamaguchi and
                  Masayuki Yamamoto and
                  Misako Yoneda and
                  Yohei Yonekura and
                  Shigehiro Yoshida and
                  Susan E. Zabierowski and
                  Peter G. Zhang and
                  Xiaobei Zhao and
                  Silvia Zucchelli and
                  Kim M. Summers and
                  Harukazu Suzuki and
                  Carsten O. Daub and
                  Jun Kawai and
                  Peter Heutink and
                  Winston Hide and
                  Tom C. Freeman and
                  Boris Lenhard and
                  Vladimir B. Bajic and
                  Martin S. Taylor and
                  Vsevolod J. Makeev and
                  Albin Sandelin and
                  David A. Hume and
                  Piero Carninci and
                  Yoshihide Hayashizaki},
  title        = {A promoter-level mammalian expression atlas},
  journal      = {Nat.},
  volume       = {507},
  number       = {7493},
  pages        = {462--470},
  year         = {2014},
  url          = {https://doi.org/10.1038/nature13182},
  doi          = {10.1038/NATURE13182},
  timestamp    = {Tue, 21 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nature/ConsortiumFKRB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Magana-MoraAJKACAB13,
  author       = {Arturo Magana{-}Mora and
                  Haitham Ashoor and
                  Boris R. Jankovic and
                  Allan Kamau and
                  Karim Awara and
                  Rajesh Chowdhary and
                  John A. C. Archer and
                  Vladimir B. Bajic},
  title        = {Dragon {TIS} Spotter: an Arabidopsis-derived predictor of translation
                  initiation sites in plants},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {1},
  pages        = {117--118},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/bts638},
  doi          = {10.1093/BIOINFORMATICS/BTS638},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/Magana-MoraAJKACAB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KalkatawiRSJKCAB13,
  author       = {Manal Kalkatawi and
                  Farania Rangkuti and
                  Michael Schramm and
                  Boris R. Jankovic and
                  Allan Kamau and
                  Rajesh Chowdhary and
                  John A. C. Archer and
                  Vladimir B. Bajic},
  title        = {Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic
                  {DNA} sequences},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {11},
  pages        = {1484},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/btt161},
  doi          = {10.1093/BIOINFORMATICS/BTT161},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KalkatawiRSJKCAB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieJBSG13,
  author       = {Bo Xie and
                  Boris R. Jankovic and
                  Vladimir B. Bajic and
                  Le Song and
                  Xin Gao},
  title        = {Poly(A) motif prediction using spectral latent features from human
                  {DNA} sequences},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {13},
  pages        = {316--325},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/btt218},
  doi          = {10.1093/BIOINFORMATICS/BTT218},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XieJBSG13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AshoorHKRBBB13,
  author       = {Haitham Ashoor and
                  Aur{\'{e}}lie H{\'{e}}rault and
                  Aur{\'{e}}lie Kamoun and
                  Fran{\c{c}}ois Radvanyi and
                  Vladimir B. Bajic and
                  Emmanuel Barillot and
                  Valentina Boeva},
  title        = {HMCan: a method for detecting chromatin modifications in cancer samples
                  using ChIP-seq data},
  journal      = {Bioinform.},
  volume       = {29},
  number       = {23},
  pages        = {2979--2986},
  year         = {2013},
  url          = {https://doi.org/10.1093/bioinformatics/btt524},
  doi          = {10.1093/BIOINFORMATICS/BTT524},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/AshoorHKRBBB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijdmb/ChowdharyZTOBL13,
  author       = {Rajesh Chowdhary and
                  Jinfeng Zhang and
                  Sin Lam Tan and
                  Daniel E. Osborne and
                  Vladimir B. Bajic and
                  Jun S. Liu},
  title        = {PIMiner: a web tool for extraction of protein interactions from biomedical
                  literature},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {7},
  number       = {4},
  pages        = {450--462},
  year         = {2013},
  url          = {https://doi.org/10.1504/IJDMB.2013.054232},
  doi          = {10.1504/IJDMB.2013.054232},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijdmb/ChowdharyZTOBL13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/SagarKRB13,
  author       = {Sunil Sagar and
                  Mandeep Kaur and
                  Aleksandar Radovanovic and
                  Vladimir B. Bajic},
  title        = {Dragon exploration system on marine sponge compounds interactions},
  journal      = {J. Cheminformatics},
  volume       = {5},
  pages        = {11},
  year         = {2013},
  url          = {https://doi.org/10.1186/1758-2946-5-11},
  doi          = {10.1186/1758-2946-5-11},
  timestamp    = {Thu, 14 Feb 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcheminf/SagarKRB13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KulakovskiyMSKVBM13,
  author       = {Ivan V. Kulakovskiy and
                  Yulia A. Medvedeva and
                  Ulf Schaefer and
                  Artem S. Kasianov and
                  Ilya E. Vorontsov and
                  Vladimir B. Bajic and
                  Vsevolod J. Makeev},
  title        = {{HOCOMOCO:} a comprehensive collection of human transcription factor
                  binding sites models},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Database-Issue},
  pages        = {195--202},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gks1089},
  doi          = {10.1093/NAR/GKS1089},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KulakovskiyMSKVBM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KalkatawiRSJKCAB12,
  author       = {Manal Kalkatawi and
                  Farania Rangkuti and
                  Michael Schramm and
                  Boris R. Jankovic and
                  Allan Kamau and
                  Rajesh Chowdhary and
                  John A. C. Archer and
                  Vladimir B. Bajic},
  title        = {Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic
                  {DNA} sequences},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {1},
  pages        = {127--129},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/btr602},
  doi          = {10.1093/BIOINFORMATICS/BTR602},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KalkatawiRSJKCAB12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MessihCBKG12,
  author       = {Mario Abdel Messih and
                  Meghana Chitale and
                  Vladimir B. Bajic and
                  Daisuke Kihara and
                  Xin Gao},
  title        = {Protein domain recurrence and order can enhance prediction of protein
                  functions},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {18},
  pages        = {444--450},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/bts398},
  doi          = {10.1093/BIOINFORMATICS/BTS398},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/MessihCBKG12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/EssackMSB12,
  author       = {Magbubah Essack and
                  Cameron MacPherson and
                  Sebastian Schmeier and
                  Vladimir B. Bajic},
  title        = {Identification of estrogen responsive genes using esophageal squamous
                  cell carcinoma {(ESCC)} as a model},
  journal      = {{BMC} Syst. Biol.},
  volume       = {6},
  pages        = {135},
  year         = {2012},
  url          = {https://doi.org/10.1186/1752-0509-6-135},
  doi          = {10.1186/1752-0509-6-135},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/EssackMSB12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SundararajanGPACLAB12,
  author       = {Vijayaraghava Seshadri Sundararajan and
                  Musa Nur Gabere and
                  Ashley Pretorius and
                  Saleem Adam and
                  Alan Christoffels and
                  Minna Lehv{\"{a}}slaiho and
                  John A. C. Archer and
                  Vladimir B. Bajic},
  title        = {{DAMPD:} a manually curated antimicrobial peptide database},
  journal      = {Nucleic Acids Res.},
  volume       = {40},
  number       = {Database-Issue},
  pages        = {1108--1112},
  year         = {2012},
  url          = {https://doi.org/10.1093/nar/gkr1063},
  doi          = {10.1093/NAR/GKR1063},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SundararajanGPACLAB12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KaurMSNCB11,
  author       = {Mandeep Kaur and
                  Cameron MacPherson and
                  Sebastian Schmeier and
                  Kothandaraman Narasimhan and
                  Mahesh Choolani and
                  Vladimir B. Bajic},
  title        = {In Silico discovery of transcription factors as potential diagnostic
                  biomarkers of ovarian cancer},
  journal      = {{BMC} Syst. Biol.},
  volume       = {5},
  pages        = {144},
  year         = {2011},
  url          = {https://doi.org/10.1186/1752-0509-5-144},
  doi          = {10.1186/1752-0509-5-144},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcsb/KaurMSNCB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SchmeierSEB11,
  author       = {Sebastian Schmeier and
                  Ulf Schaefer and
                  Magbubah Essack and
                  Vladimir B. Bajic},
  title        = {Network analysis of microRNAs and their regulation in human ovarian
                  cancer},
  journal      = {{BMC} Syst. Biol.},
  volume       = {5},
  pages        = {183},
  year         = {2011},
  url          = {https://doi.org/10.1186/1752-0509-5-183},
  doi          = {10.1186/1752-0509-5-183},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/SchmeierSEB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iasc/ShaB11,
  author       = {Daohang Sha and
                  Vladimir B. Bajic},
  title        = {An Optimized Recursive Learning Algorithm for Three-Layer Feedforward
                  Neural Networks For Mimo Nonlinear System Identifications},
  journal      = {Intell. Autom. Soft Comput.},
  volume       = {17},
  number       = {2},
  pages        = {133--147},
  year         = {2011},
  url          = {https://doi.org/10.1080/10798587.2011.10643137},
  doi          = {10.1080/10798587.2011.10643137},
  timestamp    = {Fri, 26 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/iasc/ShaB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchaeferSB11,
  author       = {Ulf Schaefer and
                  Sebastian Schmeier and
                  Vladimir B. Bajic},
  title        = {TcoF-DB: dragon database for human transcription co-factors and transcription
                  factor interacting proteins},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Database-Issue},
  pages        = {106--110},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkq945},
  doi          = {10.1093/NAR/GKQ945},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SchaeferSB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaqungoKKRSSOCB11,
  author       = {Monique Maqungo and
                  Mandeep Kaur and
                  Samuel K. Kwofie and
                  Aleksandar Radovanovic and
                  Ulf Schaefer and
                  Sebastian Schmeier and
                  Ekow Oppon and
                  Alan Christoffels and
                  Vladimir B. Bajic},
  title        = {{DDPC:} Dragon Database of Genes associated with Prostate Cancer},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Database-Issue},
  pages        = {980--985},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkq849},
  doi          = {10.1093/NAR/GKQ849},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MaqungoKKRSSOCB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/MarchandBK11,
  author       = {Benoit Marchand and
                  Vladimir B. Bajic and
                  Dinesh K. Kaushik},
  editor       = {Scott A. Lathrop and
                  Jim Costa and
                  William Kramer},
  title        = {Highly scalable \emph{ab initio} genomic motif identification},
  booktitle    = {Conference on High Performance Computing Networking, Storage and Analysis,
                  {SC} 2011, Seattle, WA, USA, November 12-18, 2011},
  pages        = {56:1--56:10},
  publisher    = {{ACM}},
  year         = {2011},
  url          = {https://doi.org/10.1145/2063384.2063459},
  doi          = {10.1145/2063384.2063459},
  timestamp    = {Fri, 03 Jul 2020 08:57:23 +0200},
  biburl       = {https://dblp.org/rec/conf/sc/MarchandBK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChowdharyBDWL10,
  author       = {Rajesh Chowdhary and
                  Vladimir B. Bajic and
                  Difeng Dong and
                  Limsoon Wong and
                  Jun S. Liu},
  title        = {Genome-wide analysis of regions similar to promoters of histone genes},
  journal      = {{BMC} Syst. Biol.},
  volume       = {4},
  number       = {{S-1}},
  pages        = {S4},
  year         = {2010},
  url          = {https://doi.org/10.1186/1752-0509-4-S1-S4},
  doi          = {10.1186/1752-0509-4-S1-S4},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ChowdharyBDWL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1004-1997,
  author       = {Daohang Sha and
                  Vladimir B. Bajic},
  title        = {An optimized recursive learning algorithm for three-layer feedforward
                  neural networks for mimo nonlinear system identifications},
  journal      = {CoRR},
  volume       = {abs/1004.1997},
  year         = {2010},
  url          = {http://arxiv.org/abs/1004.1997},
  eprinttype    = {arXiv},
  eprint       = {1004.1997},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1004-1997.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KaurRESMKSCNCB09,
  author       = {Mandeep Kaur and
                  Aleksandar Radovanovic and
                  Magbubah Essack and
                  Ulf Schaefer and
                  Monique Maqungo and
                  Tracey Kibler and
                  Sebastian Schmeier and
                  Alan Christoffels and
                  Kothandaraman Narasimhan and
                  Mahesh Choolani and
                  Vladimir B. Bajic},
  title        = {Database for exploration of functional context of genes implicated
                  in ovarian cancer},
  journal      = {Nucleic Acids Res.},
  volume       = {37},
  number       = {Database-Issue},
  pages        = {820--823},
  year         = {2009},
  url          = {https://doi.org/10.1093/nar/gkn593},
  doi          = {10.1093/NAR/GKN593},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KaurRESMKSCNCB09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/XuAPB08,
  author       = {Jian{-}Xin Xu and
                  B. Ashok and
                  Sanjib Kumar Panda and
                  Vladimir B. Bajic},
  title        = {Modeling transcription termination of selected gene groups using support
                  vector machine},
  booktitle    = {Proceedings of the International Joint Conference on Neural Networks,
                  {IJCNN} 2008, part of the {IEEE} World Congress on Computational Intelligence,
                  {WCCI} 2008, Hong Kong, China, June 1-6, 2008},
  pages        = {384--389},
  publisher    = {{IEEE}},
  year         = {2008},
  url          = {https://doi.org/10.1109/IJCNN.2008.4633821},
  doi          = {10.1109/IJCNN.2008.4633821},
  timestamp    = {Wed, 16 Oct 2019 14:14:55 +0200},
  biburl       = {https://dblp.org/rec/conf/ijcnn/XuAPB08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/PetkovB07,
  author       = {D. Petkov and
                  Vladimir B. Bajic},
  title        = {Editorial},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {8},
  number       = {1},
  pages        = {1},
  year         = {2007},
  url          = {http://www.fullcycles.org/iaamsad/ijcss/Journals/Vol8No1/IJCSS-2007-1-EDITORIAL-1.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/PetkovB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TangZTTKRB07,
  author       = {Suisheng Tang and
                  Zhuo Zhang and
                  Sin Lam Tan and
                  Man{-}Hung Eric Tang and
                  Arun Prashanth Kumar and
                  Suresh Kumar Ramadoss and
                  Vladimir B. Bajic},
  title        = {{KBERG:} KnowledgeBase for Estrogen Responsive Genes},
  journal      = {Nucleic Acids Res.},
  volume       = {35},
  number       = {Database-Issue},
  pages        = {732--736},
  year         = {2007},
  url          = {https://doi.org/10.1093/nar/gkl816},
  doi          = {10.1093/NAR/GKL816},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/TangZTTKRB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChowdharyTABWB06,
  author       = {Rajesh Chowdhary and
                  Sin Lam Tan and
                  R. Ayesha Ali and
                  Brent Boerlage and
                  Limsoon Wong and
                  Vladimir B. Bajic},
  title        = {Dragon Promoter Mapper {(DPM):} a Bayesian framework for modelling
                  promoter structures},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {18},
  pages        = {2310--2312},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl125},
  doi          = {10.1093/BIOINFORMATICS/BTL125},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChowdharyTABWB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrahmacharySYHTCKLHKKCHB06,
  author       = {Manisha Brahmachary and
                  Christian Sch{\"{o}}nbach and
                  Liang Yang and
                  Enli Huang and
                  Sin Lam Tan and
                  Rajesh Chowdhary and
                  S. P. T. Krishnan and
                  Chin{-}Yo Lin and
                  David A. Hume and
                  Chikatoshi Kai and
                  Jun Kawai and
                  Piero Carninci and
                  Yoshihide Hayashizaki and
                  Vladimir B. Bajic},
  title        = {Computational promoter analysis of mouse, rat and human antimicrobial
                  peptide-coding genes},
  journal      = {{BMC} Bioinform.},
  volume       = {7},
  number       = {{S-5}},
  year         = {2006},
  url          = {https://doi.org/10.1186/1471-2105-7-S5-S8},
  doi          = {10.1186/1471-2105-7-S5-S8},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/BrahmacharySYHTCKLHKKCHB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijbra/ChowdharyWB06,
  author       = {Rajesh Chowdhary and
                  Limsoon Wong and
                  Vladimir B. Bajic},
  title        = {Finding functional promoter motifs by computational methods: a word
                  of caution},
  journal      = {Int. J. Bioinform. Res. Appl.},
  volume       = {2},
  number       = {3},
  pages        = {282--288},
  year         = {2006},
  url          = {https://doi.org/10.1504/IJBRA.2006.010605},
  doi          = {10.1504/IJBRA.2006.010605},
  timestamp    = {Fri, 11 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijbra/ChowdharyWB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/PetkovB06,
  author       = {D. Petkov and
                  Vladimir B. Bajic},
  title        = {Editorial},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {7},
  number       = {2},
  pages        = {1},
  year         = {2006},
  url          = {http://www.fullcycles.org/iaamsad/ijcss/Journals/Vol7No2/IJCSS\%202006-2\%20-1-1.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/PetkovB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/prib/ZhangVNB06,
  author       = {Zhuo Zhang and
                  Merlin Veronika and
                  See{-}Kiong Ng and
                  Vladimir B. Bajic},
  editor       = {Jagath C. Rajapakse and
                  Limsoon Wong and
                  Raj Acharya},
  title        = {Intelligent Extraction Versus Advanced Query: Recognize Transcription
                  Factors from Databases},
  booktitle    = {Pattern Recognition in Bioinformatics, International Workshop, {PRIB}
                  2006, Hong Kong, China, August 20, 2006, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4146},
  pages        = {133--139},
  publisher    = {Springer},
  year         = {2006},
  url          = {https://doi.org/10.1007/11818564\_15},
  doi          = {10.1007/11818564\_15},
  timestamp    = {Tue, 24 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/prib/ZhangVNB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChowdharyAADB05,
  author       = {Rajesh Chowdhary and
                  R. Ayesha Ali and
                  Werner Albig and
                  Detlef Doenecke and
                  Vladimir B. Bajic},
  title        = {Promoter modeling: the case study of mammalian histone promoters},
  journal      = {Bioinform.},
  volume       = {21},
  number       = {11},
  pages        = {2623--2628},
  year         = {2005},
  url          = {https://doi.org/10.1093/bioinformatics/bti387},
  doi          = {10.1093/BIOINFORMATICS/BTI387},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChowdharyAADB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/YangHB05,
  author       = {Liang Yang and
                  Enli Huang and
                  Vladimir B. Bajic},
  title        = {Some Implementation Issues of Heuristic Methods for Motif Extraction
                  from {DNA} Sequences},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {6},
  number       = {2},
  pages        = {3--12},
  year         = {2005},
  url          = {http://www.fullcycles.org/iaamsad/ijcss/Journals/Vol6No2/IJCSS\_v6n2\_3.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/YangHB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChowdharyAB05,
  author       = {Rajesh Chowdhary and
                  R. Ayesha Ali and
                  Vladimir B. Bajic},
  editor       = {Yi{-}Ping Phoebe Chen and
                  Limsoon Wong},
  title        = {Modeling 5' regions of histone genes using Bayesian networks},
  booktitle    = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
                  2005, Singapore},
  pages        = {283--288},
  publisher    = {Imperial College Press, London},
  year         = {2005},
  url          = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/138.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/apbc/ChowdharyAB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TanCCVB05,
  author       = {Sin Lam Tan and
                  Vidhu Choudhary and
                  Alan Christoffels and
                  Byrappa Venkatesh and
                  Vladimir B. Bajic},
  editor       = {Yi{-}Ping Phoebe Chen and
                  Limsoon Wong},
  title        = {Comparison of core promoters in Fugu rubripes and human},
  booktitle    = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
                  2005, Singapore},
  pages        = {379},
  publisher    = {Imperial College Press, London},
  year         = {2005},
  url          = {http://www.comp.nus.edu.sg/\%7Ewongls/psZ/apbc2005/camera-ready/bajic.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/apbc/TanCCVB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TangHB04,
  author       = {Suisheng Tang and
                  Hao Han and
                  Vladimir B. Bajic},
  title        = {{ERGDB:} Estrogen Responsive Genes Database},
  journal      = {Nucleic Acids Res.},
  volume       = {32},
  number       = {Database-Issue},
  pages        = {533--536},
  year         = {2004},
  url          = {https://doi.org/10.1093/nar/gkh083},
  doi          = {10.1093/NAR/GKH083},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/TangHB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrahmacharyKKKSSBB04,
  author       = {Manisha Brahmachary and
                  S. P. T. Krishnan and
                  Judice L. Y. Koh and
                  Asif M. Khan and
                  Seng Hong Seah and
                  Tin Wee Tan and
                  Vladimir Brusic and
                  Vladimir B. Bajic},
  title        = {{ANTIMIC:} a database of antimicrobial sequences},
  journal      = {Nucleic Acids Res.},
  volume       = {32},
  number       = {Database-Issue},
  pages        = {586--589},
  year         = {2004},
  url          = {https://doi.org/10.1093/nar/gkh032},
  doi          = {10.1093/NAR/GKH032},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/BrahmacharyKKKSSBB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PanZCZLCHOMTKB04,
  author       = {Hong Pan and
                  Li Zuo and
                  Vidhu Choudhary and
                  Zhuo Zhang and
                  Shoi Houi Leow and
                  Fui Teen Chong and
                  Yingliang Huang and
                  Victor Wui Siong Ong and
                  Bijayalaxmi Mohanty and
                  Sin Lam Tan and
                  S. P. T. Krishnan and
                  Vladimir B. Bajic},
  title        = {Dragon {TF} Association Miner: a system for exploring transcription
                  factor associations through text-mining},
  journal      = {Nucleic Acids Res.},
  volume       = {32},
  number       = {Web-Server-Issue},
  pages        = {230--234},
  year         = {2004},
  url          = {https://doi.org/10.1093/nar/gkh484},
  doi          = {10.1093/NAR/GKH484},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/PanZCZLCHOMTKB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/BajicP03,
  author       = {Vladimir B. Bajic and
                  D. Petkov},
  title        = {Editorial: Broadening the Scope of {IJCSS}},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {4},
  number       = {1},
  pages        = {1},
  year         = {2003},
  url          = {http://www.fullcycles.org/iaamsad/ijcss/Journals/Vol4No1/2003-1.editorial-1.PDF},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/BajicP03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/BajicCH03,
  author       = {Vladimir B. Bajic and
                  Vidhu Choudhary and
                  Chuan Koh Hock},
  title        = {Content analysis of the core promoter region of human genes},
  journal      = {Silico Biol.},
  volume       = {4},
  number       = {2},
  pages        = {109--125},
  year         = {2003},
  url          = {http://content.iospress.com/articles/in-silico-biology/isb00121},
  timestamp    = {Thu, 20 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/isb/BajicCH03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChongZB03,
  author       = {Allen Chong and
                  Guanglan Zhang and
                  Vladimir B. Bajic},
  title        = {{FIE2:} a program for the extraction of genomic {DNA} sequences around
                  the start and translation initiation site of human genes},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3546--3553},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg604},
  doi          = {10.1093/NAR/GKG604},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/ChongZB03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BajicS03,
  author       = {Vladimir B. Bajic and
                  Seng Hong Seah},
  title        = {Dragon Gene Start Finder identifies approximate locations of the 5'
                  ends of genes},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3560--3563},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg570},
  doi          = {10.1093/NAR/GKG570},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/BajicS03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BajicTCTSGLL03,
  author       = {Vladimir B. Bajic and
                  Sin Lam Tan and
                  Allen Chong and
                  Suisheng Tang and
                  Anders Str{\"{o}}m and
                  Jan{-}{\AA}ke Gustafsson and
                  Chin{-}Yo Lin and
                  Edison T. Liu},
  title        = {Dragon {ERE} Finder version 2: a tool for accurate detection and analysis
                  of estrogen response elements in vertebrate genomes},
  journal      = {Nucleic Acids Res.},
  volume       = {31},
  number       = {13},
  pages        = {3605--3607},
  year         = {2003},
  url          = {https://doi.org/10.1093/nar/gkg517},
  doi          = {10.1093/NAR/GKG517},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/BajicTCTSGLL03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BajicBLNW03,
  author       = {Vladimir B. Bajic and
                  Vladimir Brusic and
                  Jinyan Li and
                  See{-}Kiong Ng and
                  Limsoon Wong},
  editor       = {Yi{-}Ping Phoebe Chen},
  title        = {From Informatics to Bioinformatics},
  booktitle    = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
                  4-7, 2003, Adelaide, Australia},
  series       = {{CRPIT}},
  volume       = {19},
  pages        = {3--12},
  publisher    = {Australian Computer Society},
  year         = {2003},
  url          = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Bajic.html},
  timestamp    = {Tue, 06 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/apbc/BajicBLNW03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fuzzIEEE/GovenderB03,
  author       = {Pobalan Govender and
                  Vladimir B. Bajic},
  title        = {A fuzzy logic tuned polynomial based predictor for processes having
                  long dead-times},
  booktitle    = {The 12th {IEEE} International Conference on Fuzzy Systems, {FUZZ-IEEE}
                  2003, St. Louis, Missouri, USA, 25-28 May 2003},
  pages        = {85--89},
  publisher    = {{IEEE}},
  year         = {2003},
  url          = {https://doi.org/10.1109/FUZZ.2003.1209342},
  doi          = {10.1109/FUZZ.2003.1209342},
  timestamp    = {Wed, 16 Oct 2019 14:14:52 +0200},
  biburl       = {https://dblp.org/rec/conf/fuzzIEEE/GovenderB03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BajicSCZKB02,
  author       = {Vladimir B. Bajic and
                  Seng Hong Seah and
                  Allen Chong and
                  Guanglan Zhang and
                  Judice L. Y. Koh and
                  Vladimir Brusic},
  title        = {Dragon Promoter Finder: recognition of vertebrate {RNA} polymerase
                  {II} promoters},
  journal      = {Bioinform.},
  volume       = {18},
  number       = {1},
  pages        = {198--199},
  year         = {2002},
  url          = {https://doi.org/10.1093/bioinformatics/18.1.198},
  doi          = {10.1093/BIOINFORMATICS/18.1.198},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BajicSCZKB02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cee/ShaB02,
  author       = {Daohang Sha and
                  Vladimir B. Bajic},
  title        = {An on-line hybrid learning algorithm for multilayer perceptron in
                  identification problems},
  journal      = {Comput. Electr. Eng.},
  volume       = {28},
  number       = {6},
  pages        = {587--598},
  year         = {2002},
  url          = {https://doi.org/10.1016/S0045-7906(00)00063-X},
  doi          = {10.1016/S0045-7906(00)00063-X},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cee/ShaB02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/expert/BajicCSB02,
  author       = {Vladimir B. Bajic and
                  Allen Chong and
                  Seng Hong Seah and
                  Vladimir Brusic},
  title        = {An Intelligent System for Vertebrate Promoter Recognition},
  journal      = {{IEEE} Intell. Syst.},
  volume       = {17},
  number       = {4},
  pages        = {64--70},
  year         = {2002},
  url          = {https://doi.org/10.1109/MIS.2002.1024754},
  doi          = {10.1109/MIS.2002.1024754},
  timestamp    = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/expert/BajicCSB02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/informaticaSI/BajicTHBH02,
  author       = {Vladimir B. Bajic and
                  Suisheng Tang and
                  Hao Han and
                  Vladimir Brusic and
                  Artemis G. Hatzigeorgiou},
  title        = {Artificial Neural Networks Based Systems for Recognition of Genomic
                  Signals and Regions: {A} Review},
  journal      = {Informatica (Slovenia)},
  volume       = {26},
  number       = {4},
  year         = {2002},
  timestamp    = {Mon, 15 Feb 2016 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/informaticaSI/BajicTHBH02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/ChongZB02,
  author       = {Allen Chong and
                  Guanglan Zhang and
                  Vladimir B. Bajic},
  title        = {Information and sequence extraction around the 5'-end and translation
                  initiation site of human genes},
  journal      = {Silico Biol.},
  volume       = {2},
  number       = {4},
  pages        = {461--465},
  year         = {2002},
  url          = {http://content.iospress.com/articles/in-silico-biology/isb00064},
  timestamp    = {Thu, 20 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/isb/ChongZB02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/simpra/ShaBY02,
  author       = {Daohang Sha and
                  Vladimir B. Bajic and
                  Huayong Yang},
  title        = {New model and sliding mode control of hydraulic elevator velocity
                  tracking system},
  journal      = {Simul. Pract. Theory},
  volume       = {9},
  number       = {6-8},
  pages        = {365--385},
  year         = {2002},
  url          = {https://doi.org/10.1016/S1569-190X(02)00058-8},
  doi          = {10.1016/S1569-190X(02)00058-8},
  timestamp    = {Mon, 18 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/simpra/ShaBY02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Baji00,
  author       = {Vladimir B. Bajic},
  title        = {Comparing the Success of Different Prediction Software in Sequence
                  Analysis: {A} Review},
  journal      = {Briefings Bioinform.},
  volume       = {1},
  number       = {3},
  pages        = {214--228},
  year         = {2000},
  url          = {https://doi.org/10.1093/bib/1.3.214},
  doi          = {10.1093/BIB/1.3.214},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/Baji00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/Bajic00,
  author       = {Vladimir B. Bajic},
  title        = {Editorial message},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {1},
  pages        = {1--2},
  year         = {2000},
  timestamp    = {Sat, 25 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijcss/Bajic00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/TabakovB00,
  author       = {P. Y. Tabakov and
                  Vladimir B. Bajic},
  title        = {Genetic algorithms and extraction of rules for detection of short
                  {DNA} motifs},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {1},
  pages        = {106--117},
  year         = {2000},
  url          = {http://research.i2r.a-star.edu.sg/iaamsad/ijcss/Journals/Vol1No1/IJCSS\_V1N1\_p106\_117.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/TabakovB00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/Bajic00a,
  author       = {Vladimir B. Bajic},
  title        = {Editorial message from the Editor-in-Chief},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {2},
  pages        = {1--2},
  year         = {2000},
  url          = {http://research.i2r.a-star.edu.sg/iaamsad/ijcss/Journals/Vol1No2/IJCSS\_V1N1\_p1\_2.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/Bajic00a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/JutanB00,
  author       = {Arthur Jutan and
                  Vladimir B. Bajic},
  title        = {Special issue: Computer-Based Control Systems},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {2},
  pages        = {180},
  year         = {2000},
  url          = {http://research.i2r.a-star.edu.sg/iaamsad/ijcss/Journals/Vol1No2/IJCSS\_V1N2\_p180.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/JutanB00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/BajicSLW00,
  author       = {Vladimir B. Bajic and
                  Daohang Sha and
                  Xinzhong Li and
                  Xingmei Wang},
  title        = {AI-based discrete sliding-mode control for real-time implementation},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {2},
  pages        = {195--213},
  year         = {2000},
  url          = {http://research.i2r.a-star.edu.sg/iaamsad/ijcss/Journals/Vol1No2/IJCSS\_V1N2\_p195\_213.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/BajicSLW00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcss/MaJB00,
  author       = {Zi Ma and
                  Arthur Jutan and
                  Vladimir B. Bajic},
  title        = {Nonlinear self-turning controller for Hammerstein plants with application
                  to a pressure tank},
  journal      = {Int. J. Comput. Syst. Signals},
  volume       = {1},
  number       = {2},
  pages        = {221--230},
  year         = {2000},
  url          = {http://research.i2r.a-star.edu.sg/iaamsad/ijcss/Journals/Vol1No2/IJCSS\_V1N2\_p221\_230.pdf},
  timestamp    = {Tue, 19 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcss/MaJB00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijsysc/ShaB00,
  author       = {Daohang Sha and
                  Vladimir B. Bajic},
  title        = {Robust discrete adaptive input-output-based sliding mode controller},
  journal      = {Int. J. Syst. Sci.},
  volume       = {31},
  number       = {12},
  pages        = {1601--1614},
  year         = {2000},
  url          = {https://doi.org/10.1080/00207720050217377},
  doi          = {10.1080/00207720050217377},
  timestamp    = {Wed, 22 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijsysc/ShaB00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/informaticaSI/ShaB99,
  author       = {Daohang Sha and
                  Vladimir B. Bajic},
  title        = {Adaptive On-line {ANN} Learning Algorithm and Application to Identification
                  of Non-linear Systems},
  journal      = {Informatica (Slovenia)},
  volume       = {23},
  number       = {4},
  year         = {1999},
  timestamp    = {Mon, 15 Feb 2016 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/informaticaSI/ShaB99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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