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ORCIDBibTeX records: Mostafa M. Abbas
@article{DBLP:journals/access/AbbasSRKE22,
author = {Mostafa M. Abbas and
Mostafa I. Soliman and
Sherif I. Rabia and
Keiji Kimura and
Ahmed El{-}Mahdy},
title = {Accelerating Data Dependence Profiling Through Abstract Interpretation
of Loop Instructions},
journal = {{IEEE} Access},
volume = {10},
pages = {31626--31640},
year = {2022},
url = {https://doi.org/10.1109/ACCESS.2022.3160729},
doi = {10.1109/ACCESS.2022.3160729},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/AbbasSRKE22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/El-ManzalawyAHC21,
author = {Yasser El{-}Manzalawy and
Mostafa M. Abbas and
Ian Hoaglund and
Alvaro Ulloa Cerna and
Thomas B. Morland and
Christopher M. Haggerty and
Eric S. Hall and
Brandon K. Fornwalt},
title = {{OASIS} +: leveraging machine learning to improve the prognostic accuracy
of {OASIS} severity score for predicting in-hospital mortality},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21},
number = {1},
pages = {156},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01517-7},
doi = {10.1186/S12911-021-01517-7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/El-ManzalawyAHC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-00599,
author = {Mostafa M. Abbas and
Ehsan Ullah and
Abdelkader Baggag and
Halima Bensmail and
Michael Sedlmair and
Micha{\"{e}}l Aupetit},
title = {ClustRank: a Visual Quality Measure Trained on Perceptual Data for
Sorting Scatterplots by Cluster Patterns},
journal = {CoRR},
volume = {abs/2106.00599},
year = {2021},
url = {https://arxiv.org/abs/2106.00599},
eprinttype = {arXiv},
eprint = {2106.00599},
timestamp = {Wed, 21 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2106-00599.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocs/SalkovicABEB20,
author = {Edin Salkovic and
Mostafa M. Abbas and
Samir Brahim Belhaouari and
Khaoula Errafii and
Halima Bensmail},
title = {OutPyR: Bayesian inference for RNA-Seq outlier detection},
journal = {J. Comput. Sci.},
volume = {47},
pages = {101245},
year = {2020},
url = {https://doi.org/10.1016/j.jocs.2020.101245},
doi = {10.1016/J.JOCS.2020.101245},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jocs/SalkovicABEB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/arcs/AbbasOER20,
author = {Mostafa M. Abbas and
Rasha Salah Omar and
Ahmed El{-}Mahdy and
Erven Rohou},
editor = {Andr{\'{e}} Brinkmann and
Wolfgang Karl and
Stefan Lankes and
Sven Tomforde and
Thilo Pionteck and
Carsten Trinitis},
title = {Approximate Data Dependence Profiling Based on Abstract Interval and
Congruent Domains},
booktitle = {Architecture of Computing Systems - {ARCS} 2020 - 33rd International
Conference, Aachen, Germany, May 25-28, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12155},
pages = {3--16},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-52794-5\_1},
doi = {10.1007/978-3-030-52794-5\_1},
timestamp = {Thu, 23 Jun 2022 19:59:00 +0200},
biburl = {https://dblp.org/rec/conf/arcs/AbbasOER20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cgf/AbbasASB19,
author = {Mostafa M. Abbas and
Micha{\"{e}}l Aupetit and
Michael Sedlmair and
Halima Bensmail},
title = {ClustMe: {A} Visual Quality Measure for Ranking Monochrome Scatterplots
based on Cluster Patterns},
journal = {Comput. Graph. Forum},
volume = {38},
number = {3},
pages = {225--236},
year = {2019},
url = {https://doi.org/10.1111/cgf.13684},
doi = {10.1111/CGF.13684},
timestamp = {Wed, 21 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cgf/AbbasASB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visualization/AupetitSABB19,
author = {Micha{\"{e}}l Aupetit and
Michael Sedlmair and
Mostafa M. Abbas and
Abdelkader Baggag and
Halima Bensmail},
title = {Toward Perception-Based Evaluation of Clustering Techniques for Visual
Analytics},
booktitle = {30th {IEEE} Visualization Conference, {IEEE} {VIS} 2019 - Short Papers,
Vancouver, BC, Canada, October 20-25, 2019},
pages = {141--145},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/VISUAL.2019.8933620},
doi = {10.1109/VISUAL.2019.8933620},
timestamp = {Wed, 21 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/visualization/AupetitSABB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasLBHE18,
author = {Mostafa M. Abbas and
Thanh Le and
Halima Bensmail and
Vasant G. Honavar and
Yasser El{-}Manzalawy},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based
Feature Selection},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {172--177},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233602},
doi = {10.1145/3233547.3233602},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasLBHE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasE17,
author = {Mostafa M. Abbas and
Yasser El{-}Manzalawy},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Predictive and Comparative Network Analysis of the Gut Microbiota
in Type 2 Diabetes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {313--320},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107472},
doi = {10.1145/3107411.3107472},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/YuTAMAO17,
author = {Yongyang Yu and
MingJie Tang and
Walid G. Aref and
Qutaibah M. Malluhi and
Mostafa M. Abbas and
Mourad Ouzzani},
title = {In-Memory Distributed Matrix Computation Processing and Optimization},
booktitle = {33rd {IEEE} International Conference on Data Engineering, {ICDE} 2017,
San Diego, CA, USA, April 19-22, 2017},
pages = {1047--1058},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/ICDE.2017.150},
doi = {10.1109/ICDE.2017.150},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/YuTAMAO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/BahigAM17,
author = {Hazem M. Bahig and
Mostafa M. Abbas and
Mustafa M. Mohie{-}Eldin},
editor = {Ignacio Rojas and
Francisco M. Ortu{\~{n}}o Guzman},
title = {Parallelizing Partial Digest Problem on Multicore System},
booktitle = {Bioinformatics and Biomedical Engineering - 5th International Work-Conference,
{IWBBIO} 2017, Granada, Spain, April 26-28, 2017, Proceedings, Part
{II}},
series = {Lecture Notes in Computer Science},
volume = {10209},
pages = {95--104},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-56154-7\_10},
doi = {10.1007/978-3-319-56154-7\_10},
timestamp = {Wed, 20 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iwbbio/BahigAM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbbasB16,
author = {Mostafa M. Abbas and
Hazem M. Bahig},
title = {A fast exact sequential algorithm for the partial digest problem},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-19}},
pages = {139--148},
year = {2016},
url = {https://doi.org/10.1186/s12859-016-1365-2},
doi = {10.1186/S12859-016-1365-2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AbbasB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icppw/AbbasE16,
author = {Mostafa M. Abbas and
Ahmed El{-}Mahdy},
title = {Approximate Data Dependence Graph Generation Using Adaptive Sampling},
booktitle = {45th International Conference on Parallel Processing Workshops, {ICPP}
Workshops 2016, Philadelphia, PA, USA, August 16-19, 2016},
pages = {329--337},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/ICPPW.2016.54},
doi = {10.1109/ICPPW.2016.54},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icppw/AbbasE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwbbio/AbbasBM15,
author = {Mostafa M. Abbas and
Ponnuraman Balakrishnan and
Qutaibah M. Malluhi},
editor = {Francisco M. Ortu{\~{n}}o Guzman and
Ignacio Rojas},
title = {Evaluation of Combined Genome Assemblies: {A} Case Study with Fungal
Genomes},
booktitle = {Bioinformatics and Biomedical Engineering - Third International Conference,
{IWBBIO} 2015, Granada, Spain, April 15-17, 2015. Proceedings, Part
{II}},
series = {Lecture Notes in Computer Science},
volume = {9044},
pages = {333--344},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-16480-9\_33},
doi = {10.1007/978-3-319-16480-9\_33},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/iwbbio/AbbasBM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tjs/AbbasBAM14,
author = {Mostafa M. Abbas and
Hazem M. Bahig and
Mohamed Abouelhoda and
Mustafa M. Mohie{-}Eldin},
title = {Parallelizing exact motif finding algorithms on multi-core},
journal = {J. Supercomput.},
volume = {69},
number = {2},
pages = {814--826},
year = {2014},
url = {https://doi.org/10.1007/s11227-014-1180-3},
doi = {10.1007/S11227-014-1180-3},
timestamp = {Wed, 20 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tjs/AbbasBAM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispdc/AbbasMB14,
author = {Mostafa M. Abbas and
Qutaibah M. Malluhi and
Ponnuraman Balakrishnan},
editor = {Traian Muntean and
Robert Rolland and
L{\'{e}}on Mugwaneza},
title = {Scalable Multi-core Implementation for Motif Finding Problem},
booktitle = {{IEEE} 13th International Symposium on Parallel and Distributed Computing,
{ISPDC} 2014, Marseille, France, June 24-27, 2014},
pages = {178--183},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/ISPDC.2014.27},
doi = {10.1109/ISPDC.2014.27},
timestamp = {Wed, 16 Oct 2019 14:14:54 +0200},
biburl = {https://dblp.org/rec/conf/ispdc/AbbasMB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mics/AbbasB13,
author = {Mostafa M. Abbas and
Hazem M. Bahig},
title = {An Efficient Algorithm to Identify {DNA} Motifs},
journal = {Math. Comput. Sci.},
volume = {7},
number = {4},
pages = {387--399},
year = {2013},
url = {https://doi.org/10.1007/s11786-013-0165-6},
doi = {10.1007/S11786-013-0165-6},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mics/AbbasB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbbasAB12,
author = {Mostafa M. Abbas and
Mohamed Abouelhoda and
Hazem M. Bahig},
title = {A hybrid method for the exact planted (l, d) motif finding problem
and its parallelization},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S10},
doi = {10.1186/1471-2105-13-S17-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AbbasAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aiccsa/AbbasB09,
author = {Mostafa M. Abbas and
Hazem M. Bahig},
editor = {El Mostapha Aboulhamid and
Jos{\'{e}} Luis Sevillano},
title = {Performance and analysis of modified voting algorithm for planted
motif search},
booktitle = {The 7th {IEEE/ACS} International Conference on Computer Systems and
Applications, {AICCSA} 2009, Rabat, Morocco, May 10-13, 2009},
pages = {725--731},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/AICCSA.2009.5069407},
doi = {10.1109/AICCSA.2009.5069407},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aiccsa/AbbasB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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