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ORCIDJournal of Bioinformatics and Computational Biology, Volume 21
Volume 21, Number 1, February 2023
- Jayanta Pal
, Sourav Saha, Bansibadan Maji, Dilip Kumar Bhattacharya:
PTGAC Model: A machine learning approach for constructing phylogenetic tree to compare protein sequences. 2250028:1-2250028:19 - Andrea Mae Añonuevo, Marineil C. Gomez, Lemmuel Lara Tayo:
In silico de novo drug design of a therapeutic peptide inhibitor against UBE2C in breast cancer. 2250029:1-2250029:20 - Mukhtar Ahmad Sofi, M. Arif Wani:
RiRPSSP: A unified deep learning method for prediction of regular and irregular protein secondary structures. 2350001:1-2350001:25
- Ching-Nung Lin, Christine H. Chung, Aik Choon Tan:
NuKit: A deep learning platform for fast nucleus segmentation of histopathological images. 2350002:1-2350002:14
- Yonglin Zhang, Mei Hu, Qi Mo, Wenli Gan, Jiesi Luo:
A novel method for predicting DNA N4-methylcytosine sites based on deep forest algorithm. 2350003:1-2350003:18 - Zi-yi He, Jie-yu Yang, Yong Li:
A pharmacokinetic model based on the SSA-1DCNN-Attention method. 2350004:1-2350004:16
- Wilson Wen Bin Goh, Weijia Kong, Limsoon Wong:
Evaluating network-based missing protein prediction using p-values, Bayes Factors, and probabilities. 2350005:1-2350005:13 - Hui-Ling Huang, Chong-Heng Weng, Torbjörn E. M. Nordling, Yi-Fan Liou:
ThermalProGAN: A sequence-based thermally stable protein generator trained using unpaired data. 2350008:1-2350008:18
Volume 21, Number 2, April 2023
- Anna Dotsenko, Jury Denisenko, Dmitrii Osipov, Aleksandra Rozhkova, Ivan Zorov, Arkady Sinitsyn:
Testing and improving the performance of protein thermostability predictors for the engineering of cellulases. 2330001:1-2330001:18
- Michael Khristichenko, Yuri M. Nechepurenko, Dmitry Grebennikov, Gennady Bocharov:
Numerical study of chronic hepatitis B infection using Marchuk-Petrov model. 2340001:1-2340001:11 - Standa Na, Dhammika Leshan Wannigama, Thammakorn Saethang:
Antimicrobial peptides recognition using weighted physicochemical property encoding. 2350006:1-2350006:19 - Ke Chen, Lili Ge, Guorui Liu:
Integrated in silico-in vitro rational design of oncogenic EGFR-derived specific monoclonal antibody-binding peptide mimotopes. 2350007:1-2350007:14 - Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias:
Rearrangement distance with reversals, indels, and moves in intergenic regions on signed and unsigned permutations. 2350009:1-2350009:30
- Wei Xin Chan, Limsoon Wong:
Obstacles to effective model deployment in healthcare. 2371001:1-2371001:10
Volume 21, Number 3, June 2023
- Hongliang Zou, Zizheng Yu, Zhijian Yin:
Integrating temporal and spatial variabilities for identifying ion binding proteins in phage. 2350010:1-2350010:11 - Aiqing Ma, Xianhua Dai:
The mechanism accounting for DNA damage strength modulation of p53 dynamical properties. 2350011:1-2350011:22 - Qi-Shi Song, Hai-Jun Wu, Qian Lin, Yu-Kai Tang:
Identification of a seven autophagy-related gene pairs signature for the diagnosis of colorectal cancer using the RankComp algorithm. 2350012:1-2350012:16 - Jie-Huei Wang, Yi-Hau Chen:
Overlapping group screening for binary cancer classification with TCGA high-dimensional genomic data. 2350013:1-2350013:22 - Pooja Rani, Kamlesh Dutta, Vijay Kumar:
Drug synergy model for malignant diseases using deep learning. 2350014:1-2350014:18 - Büsra Özkan Kök, Yasemin Celik Altunoglu, Ali Burak Öncül, Abdulkadir Karaci, Mehmet Cengiz Baloglu:
Expansin gene family database: A comprehensive bioinformatics resource for plant expansin multigene family. 2350015:1-2350015:18
Volume 21, Number 4, August 2023
- Maria Waldl, Thomas Spicher, Ronny Lorenz, Irene K. Beckmann, Ivo L. Hofacker, Sarah von Löhneysen, Peter F. Stadler:
Local RNA folding revisited. 2350016:1-2350016:19 - Hayat Ali Shah, Juan Liu, Zhihui Yang, Feng Yang, Qiang Zhang, Jing Feng:
DeepRT: Predicting compounds presence in pathway modules and classifying into module classes using deep neural networks based on molecular properties. 2350017:1-2350017:20 - Zhaoyang Hu, Qingsen Liu, Zhong Ni:
Facilitating the drug repurposing with iC/E strategy: A practice on novel nNOS inhibitor discovery. 2350018:1-2350018:14 - Carlos E. M. Relvas, Asuka Nakata, Guoan Chen, David G. Beer, Noriko Gotoh, André Fujita:
A model-based clustering algorithm with covariates adjustment and its application to lung cancer stratification. 2350019:1-2350019:26 - Fuyan Hu, Bifeng Chen, Qing Wang, Zhiyuan Yang, Man Chu:
Multi-omics data analysis reveals the biological implications of alternative splicing events in lung adenocarcinoma. 2350020:1-2350020:21
Volume 21, Number 5, October 2023
- Konstantinos Lazaros, Panagiotis Vlamos, Aristidis G. Vrahatis:
Methods for cell-type annotation on scRNA-seq data: A recent overview. 2340002:1-2340002:34
- Chao Li, Tianxiang Wang, Xiaohui Lin:
Analyzing omics data by feature combinations based on kernel functions. 2350021:1-2350021:19 - Jiasheng He, Shun Zhang, Chun Fang:
AAindex-PPII: Predicting polyproline type II helix structure based on amino acid indexes with an improved BiGRU-TextCNN model. 2350022:1-2350022:19 - Zizheng Yu, Zhijian Yin, Hongliang Zou:
iAMY-RECMFF: Identifying amyloidgenic peptides by using residue pairwise energy content matrix and features fusion algorithm. 2350023:1-2350023:16 - Ying Zeng, Zheming Yuan, Yuan Chen, Ying Hu:
CBDT-Oglyc: Prediction of O-glycosylation sites using ChiMIC-based balanced decision table and feature selection. 2350024:1-2350024:20
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