Volume 4,
Number 1,
2008
- ZhenQiu Liu, Dechang Chen, Jianjun Paul Tian:
Classification of proteomic data with multiclass Logistic Partial Least Squares algorithm.
1-10
- Suely Oliveira, Sang-Cheol Seok:
A matrix-based multilevel approach to identify functional protein modules.
11-27
- Imad Rahal, Riad Rahhal, Baoying Wang, William Perrizo:
CARIBIAM: Constrained Association Rules using Interactive Biological IncrementAl Mining.
28-48
- Yong Li, Xiujuan Chen, Saeid Belkasim, Yi Pan:
High performance bio-image database retrieval using MPI.
49-63
- Deyu Zhou, Yulan He, Chee Keong Kwoh:
Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model.
64-80
- Marcel H. Schulz, Sebastian Bauer, Peter N. Robinson:
The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences.
81-95
- Jianxin Wang, De Yang:
UPNT: Uniform Projection and Neighbourhood Thresholding method for motif discovery.
96-106
- Patricia Buendia, Timothy M. Collins, Giri Narasimhan:
The role of internal node sequences and the molecular clock in the analysis of serially-sampled data.
107-121
Volume 4,
Number 2,
2008
- Peng Chen, De-Shuang Huang, Xing-Ming Zhao, Xueling Li:
Predicting contact map using Radial Basis Function Neural Network with Conformational Energy Function.
123-136
- Yong Chen, Guojun Li:
An effective algorithm of motif finding problem.
137-149
- Jing Li:
A novel strategy for detecting multiple loci in Genome-Wide Association Studies of complex diseases.
150-163
- Xingqin Qi, Jichang Wu, Shuguang Li, Guojun Li:
Sorting by transpositions: dealing with length-weighted models.
164-171
- J. Cui, C. Chen, H. Lu, P. Shen:
Modelling of the mitochondrial apoptosis network.
172-187
- Aili Han, Daming Zhu, Jingchang Pan:
DNA solution based on sequence alignment to the Minimum Spanning Tree problem.
188-200
- Jian Tian, Xuexia Guo, Xiaoyu Chu, Ningfeng Wu, Jun Guo, Bin Yao:
Predicting the protein family of Methyl Parathion Hydrolase.
201-210
- Zhihua Liu, Xiao Sun:
Coronavirus phylogeny based on Base-Base Correlation.
211-220
Volume 4,
Number 3,
2008
- Ivan Merelli, Alessandro Orro, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
A parallel protein surface reconstruction system.
221-239
- Jamil Ahmad, Olivier Roux, Gilles Bernot, Jean-Paul Comet, Adrien Richard:
Analysing formal models of genetic regulatory networks with delays.
240-262
- Xutao Deng, Huimin Geng, Hesham H. Ali:
A Hidden Markov Model approach to predicting yeast gene function from sequential gene expression data.
263-273
- Jonas Gamalielsson, Björn Olsson:
GOSAP: Gene Ontology-Based Semantic Alignment of Biological Pathways.
274-294
- Kunpeng Zhang, Yun Xu, Guoliang Chen:
PECB: prediction of enzyme catalytic residues based on Naive Bayes classification.
295-305
- Theo A. Knijnenburg, Lodewyk F. A. Wessels, Marcel J. T. Reinders:
Creating gene set activity profiles with time-series expression data.
306-323
- Liza S. Z. Larsen, Christopher D. Wassman, G. Wesley Hatfield, Richard H. Lathrop:
Computationally Optimised DNA Assembly of synthetic genes.
324-336
- Liping Du, Shuanhu Wu, Alan Wee-Chung Liew, David Keith Smith, Hong Yan:
Spectral analysis of microarray gene expression time series data of Plasmodium falciparum.
337-349
Volume 4,
Number 4,
2008
- Z. Wu, Y. Zhang:
Solving large double digestion problems for DNA restriction mapping by using branch-and-bound integer linear programming.
351-362
- Bo Geng, Xiaobo Zhou, Y. S. Hung, Stephen T. C. Wong:
Comparison of Bayesian and regression models in missing enzyme identification.
363-374
- Xing-Ming Zhao, Luonan Chen, Kazuyuki Aihara:
Protein function prediction with the shortest path in functional linkage graph and boosting.
375-384
- Morihiro Hayashida, Fuyan Sun, Sachiyo Aburatani, Katsuhisa Horimoto, Tatsuya Akutsu:
Integer programming-based approach to allocation of reporter genes for cell array analysis.
385-399
- Martin Brown, Fei He, Lam Fat Yeung:
Robust measurement selection for biochemical pathway experimental design.
400-416
- Haiyong Liao, Michael K. Ng, Eric S. Fung, Pak Chung Sham:
Unidimensional nonnegative scaling for genome-wide Linkage Disequilibrium maps.
417-434
- Hirokazu Tozaki, Taiichiro Kobe, Kazuyuki Aihara, Hideo Iwasaki:
An attempt to reveal a role of a transcription/translation feedback loop in the cyanobacterial KaiC protein-based circadian system by using a semi-synthetic method.
435-444
- Zhi-Ping Liu, Ling-Yun Wu, Yong Wang, Xiang-Sun Zhang, Luonan Chen:
Protein cavity clustering based on community structure of pocket similarity network.
445-460
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