Volume 11, Number 1, January-February 2009

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  Isabel Beichl: Begin at the Beginning. 3
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  Sergey Fomel, Jon F. Claerbout: Guest Editors' Introduction: Reproducible Research. 5-7
• 
  David L. Donoho, Arian Maleki, Inam Ur Rahman, Morteza Shahram, Victoria Stodden: Reproducible Research in Computational Harmonic Analysis. 8-18
• 
  Randall J. LeVeque: Python Tools for Reproducible Research on Hyperbolic Problems. 19-27
• 
  Roger D. Peng, Sandrah P. Eckel: Distributed Reproducible Research Using Cached Computations. 28-34
• 
  Victoria Stodden: The Legal Framework for Reproducible Scientific Research: Licensing and Copyright. 35-40
• 
  Roberto Olivares-Amaya, Romelia Salomón-Ferrer, William A. Lester Jr., Carlos Amador-Bedolla: Creating a GUI for Zori, a Quantum Monte Carlo Program. 41-47
• 
  Francesco Belletti, Maria Cotallo, Andres Cruz Flor, Luis Antonio Fernandez, Antonio Gordillo-Guerrero, Marco Guidetti, Andrea Maiorano, Filippo Mantovani, Enzo Marinari, Victor Martin-Mayor, Antonio Munoz Sudupe, Denis Navarro, Giorgio Parisi, Sergio Perez Gaviro, Mauro Rossi, Juan Jesus Ruiz-Lorenzo, Sebastiano Fabio Schifano, Daniele Sciretti, Alfonso Tarancón, Raffaele Tripiccione, Jose Luis Velasco, David Yllanes, Gianpaolo Zanier: Janus: An FPGA-Based System for High-Performance Scientific Computing. 48-58
• 
  Daniel Tofan: Drawing Chemical Equipment with Adobe Illustrator, Part 2: Creating and Modifying Shapes. 59-61
• 
  Mark Sich: Interactive Holography: Pursuit of a Dream. 62-65
• 
  Mohammad Saadatfar: Computer Simulation of Granular Materials. 66-74
• 
  Julie Mullen, Nadya Travinin Bliss, Robert Bond, Jeremy Kepner, Hahn Kim, Albert Reuther: High-Productivity Software Development with pMatlab. 75-79
• 
  Francis Sullivan: That Was Then, This Is Now. 80

Volume 11, Number 2, March-April 2009

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  Isabel Beichl: We'll Take Care of All Your Problems. 3-4
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  Jeffrey C. Carver: First International Workshop on Software Engineering for Computational Science & Engineering. 7-11
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  Michael Jay Schillaci: Total Tomography. 12-13
• 
  Alan C. Calder, Richard T. Kouzes: Advances in Computational Astrophysics. 15-17
• 
  Dean M. Townsley: Treating Unresolvable Flame Physics in Simulations of Thermonuclear Supernovae. 18-23
• 
  Ann S. Almgren, John B. Bell, Andy Nonaka, Michael Zingale: A New Low Mach Number Approach in Astrophysics. 24-33
• 
  Eric S. Myra, F. Douglas Swesty, Dennis C. Smolarski: Stellar Core Collapse: A Case Study in the Design of Numerical Algorithms for Scalable Radiation Hydrodynamics. 34-44
• 
  Enrico Vesperini, David M. Goldberg, Stephen L. W. McMillan, James Dura, Douglas Jones: The Beowulf Analysis Symbolic INterface: Interactive Parallel Data Analysis for Everyone. 45-51
• 
  George Stantchev, Derek Juba, William Dorland, Amitabh Varshney: Using Graphics Processors for High-Performance Computation and Visualization of Plasma Turbulence. 52-59
• 
  Daniel Tofan: Drawing Chemical Equipment with Adobe Illustrator, Part 3: Gradients, Retouching, and More Objects. 60-61
• 
  Konstantin Läufer, George K. Thiruvathukal, Ryohei Nishimura, Carlos Ramirez Martinez-Eiroa: Putting a Slug to Work. 62-68
• 
  Jianwei Ma, Gerlind Plonka: Computing with Curvelets: From Image Processing to Turbulent Flows. 72-80
• 
  Carlos A. Dietrich, Carlos Eduardo Scheidegger, João Luiz Dihl Comba, Luciana Porcher Nedel, Cláudio T. Silva: Marching Cubes without Skinny Triangles. 82-87
• 
  Charles Day: "Compute? No, Mr. Bond, I Expect You to Die!". 88

Volume 11, Number 3, May-June 2009

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  Douglass E. Post: The Promise of Science-Based Computational Engineering. 3-4
• 
  Jonathan E. Guyer, Daniel Wheeler, James A. Warren: FiPy: Partial Differential Equations with Python. 6-15
• 
  Wen-mei W. Hwu, Christopher I. Rodrigues, Shane Ryoo, John A. Stratton: Compute Unified Device Architecture Application Suitability. 16-26
• 
  Yang Zhang, Edward A. Luke: Concurrent Composition Using Loci. 27-35
• 
  Héctor Vargas, José Sánchez Moreno, Sebastián Dormido, Christophe Salzmann, Denis Gillet, Francisco Esquembre: Web-Enabled Remote Scientific Environments. 36-46
• 
  Hong Tang, Yusheng Dou, Mingze Bai: Molecular Response to Ultrashort Laser Pulses. 47-53
• 
  Volodymyr V. Kindratenko: Novel Computing Architectures. 54-57
• 
  Joel Falcou: Parallel Programming with Skeletons. 58-63
• 
  Peter A. Knipp, S. Raj Chaudhury: Postprocessing in Automated Grading Systems, Part 1. 64-67
• 
  Joel E. Tohline, Jinghya Ge, Wesley Even, Erik Anderson: A Customized Python Module for CFD Flow Analysis within VisTrails. 68-73
• 
  Isabel Beichl, Francis Sullivan: Cut It Out!. 74-79
• 
  Norman Chonacky: A Modern Tower of Babel. 80

Volume 11, Number 4, July-August 2009

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  Jim X. Chen: A Personal Reflection. 3
• 
  Rubin H. Landau, Jose E. Castillo: Computational Science Research and Graduate Studies at San Diego State University. 5
• 
  Norman Chonacky: Computation in Modern Physics. 6-7
• 
  George K. Thiruvathukal: Introducing Computing Now. 8-10
• 
  Francis Sullivan: Guest Editor's Introduction: Cloud Computing for the Sciences. 10-11
• 
  James L. Johnson: SQL in the Clouds. 12-28
• 
  Jonathan Cohen: Graph Twiddling in a MapReduce World. 29-41
• 
  Thomas L. Sterling, Dylan Stark: A High-Performance Computing Forecast: Partly Cloudy. 42-49
• 
  Stergios Papadimitriou, Constantinos Terzidis, Seferina Mavroudi, Spiridon D. Likothanassis: Scientific Scripting for the Java Platform with jLab. 50-60
• 
  Michael A. Gray: Getting Started with GPU Programming. 61-64
• 
  Mahyar Madadi, Anthony C. Jones, Christoph H. Arns, Mark A. Knackstedt: 3D Imaging and Simulation of Elastic Properties of Porous Materials. 65-73
• 
  You-Zhou Xie, Lin Yang, Li-Fen Chen, Pei-Dong Dai, Tian-Yu Zhang, Jim X. Chen, Zheng-Min Wang: A Virtual Platform for Auditory Organ Mechanics Analysis. 74-80
• 
  Peter A. Knipp, S. Raj Chaudhury: Postprocessing in Automated Grading Systems, Part 2. 82-85
• 
  Konrad Hinsen: The Promises of Functional Programming. 86-90
• 
  Paul Henning, Andrew B. White Jr.: Trailblazing with Roadrunner. 91-95
• 
  Charles Day: Vets 1, Docs 1. 96

Volume 11, Number 5, September-October 2009

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  Isabel Beichl: Where the Rubber Meets the Road. 3
• 
  William H. Press: That Perfect Algorithm for Any Occasion. 5-6
• 
  Thom H. Dunning: Guest Editor's Introduction: Science and Engineering on Petascale Computers. 7-9
• 
  Peter M. Kogge: The Challenges of Petascale Architectures. 10-16
• 
  William D. Gropp: Software for Petascale Computing Systems. 17-21
• 
  Sharon C. Glotzer, Bob Panoff, Scott Lathrop: Challenges and Opportunities in Preparing Students for Petascale Computational Science and Engineering. 22-27
• 
  Thom H. Dunning, Klaus Schulten, Jeroen Tromp, Jeremiah P. Ostriker, Kelvin Droegemeier, Ming Xue, Paul Fussell: Science and Engineering in the Petascale Era. 28-37
• 
  Daniel Muller, Bernhard Fleck, George Dimitoglou, Benjamin W. Caplins, Desmond E. Amadigwe, Juan Pablo Garcia Ortiz, Benjamin Wamsler, Alen Alexanderian, V. Keith Hughitt, Jack Ireland: JHelioviewer: Visualizing Large Sets of Solar Images Using JPEG 2000. 38-47
• 
  Diane Kelly, Daniel Hook, Rebecca Sanders: Five Recommended Practices for Computational Scientists Who Write Software. 48-53
• 
  Ernst P. Mücke: Quickhull: Computing Convex Hulls Quickly. 54-57
• 
  Jonathan Cohen, Michael Garland: Solving Computational Problems with GPU Computing. 58-63
• 
  Peter A. Knipp, S. Raj Chaudhury: Postprocessing in Automated Grading Systems, Part 3. 64-67
• 
  Konstantin Läufer, George K. Thiruvathukal: The Promises of Typed, Pure, and Lazy Functional Programming: Part II. 68-75
• 
  Gerassimos Orkoulas: An Overview of Monte Carlo Methods for Fluid Simulation. 76-87
• 
  Attila Gyulassy, Luis Gustavo Nonato, Peer-Timo Bremer, Cláudio T. Silva, Valerio Pascucci: Robust Topology-Based Multiscale Analysis of Scientific Data. 88-95
• 
  Charles Day: Advice from Uncle Charles. 96

Volume 11, Number 6, November-December 2009

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  Hans-Joachim Bungartz, Donald J. Estep, Ulrich Rüde, Peter Turner: Computational Science and Engineering Education: SIAM's Perspective. 5-11
• 
  George K. Thiruvathukal: Computational Thinking … and Doing. 4
• 
  Greg Wilson, Andrew Lumsdaine: Software Engineering and Computational Science. 12-13
• 
  Jeffrey C. Carver: Report: The Second International Workshop on Software Engineering for CSE. 14-19
• 
  Sarah A. Killcoyne, John Boyle: Managing Chaos: Lessons Learned Developing Software in the Life Sciences. 20-29
• 
  Stuart R. Faulk, Eugene Loh, Michael L. Van de Vanter, Susan Squires, Lawrence G. Votta: Scientific Computing's Productivity Gridlock: How Software Engineering Can Help. 30-39
• 
  Daniel Hook, Diane Kelly: Mutation Sensitivity Testing. 40-47
• 
  Steven L. Eddins: Automated Software Testing for Matlab. 48-55
• 
  Field G. Van Zee, Ernie Chan, Robert A. van de Geijn, Enrique S. Quintana-Ortí, Gregorio Quintana-Ortí: The libflame Library for Dense Matrix Computations. 56-63
• 
  Steve M. Easterbrook, Timothy C. Johns: Engineering the Software for Understanding Climate Change. 65-74
• 
  Thomas C. McMail: Next-Generation Research and Breakthrough Innovation. 76-84
• 
  Charles Day: Lessons from Little Dorrit. 104
• 
  Konrad Hinsen, Konstantin Läufer, George K. Thiruvathukal: Essential Tools: Version Control Systems. 84-91
• 
  Amr M. Bayoumi, Michael Chu, Yasser Y. Hanafy, Patricia Harrell, Gamal Refai-Ahmed: Scientific and Engineering Computing Using ATI Stream Technology. 92-97
• 
  Werner Benger: On Safari in the File Format Jungle - Why Can't You Visualize My Data? 98-102
• 
  Larry Engelhardt: Descriptions and Comparisons of Monte Carlo Algorithms. 103

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