Volume 181, Number 1, January 2010

• 
  Vineet K. Singh, Rajesh K. Pandey, Saurabh Singh: A stable algorithm for Hankel transforms using hybrid of Block-pulse and Legendre polynomials. 1-10
• 
  Weiwei Cai, Lin Ma: Applications of critical temperature in minimizing functions of continuous variables with simulated annealing algorithm. 11-16
• 
  N. Mohankumar, S. Sen, R. Ramar: On the evaluation of correction terms in Gauss-Legendre quadrature. 17-20
• 
  M. Amaku, P. R. Pascholati, V. R. Vanin: Decay chain differential equations: Solution through matrix algebra. 21-23
• 
  Manuel Aldegunde, Natalia Seoane, Antonio J. García-Loureiro, Karol Kalna: Reduction of the self-forces in Monte Carlo simulations of semiconductor devices on unstructured meshes. 24-34
• 
  Mario Zacarés, Miguel Arevalillo-Herráez, S. Abraham: A group-theory method to find stationary states in nonlinear discrete symmetry systems. 35-42
• 
  Mehdi Dehghan, Ameneh Taleei: A compact split-step finite difference method for solving the nonlinear Schrödinger equations with constant and variable coefficients. 43-51
• 
  Liming Zhang, Ali Deng, Minghong Wang, Shaoqing Yang: Numerical study of a novel MFIE formulation using monopolar RWG basis functions. 52-60
• 
  H. Frerichs, D. Reiter, Y. Feng, D. Harting: Block-structured grids in Lagrangian 3D edge plasma transport simulations. 61-70
• 
  Robert C. Tautz: A new simulation code for particle diffusion in anisotropic, large-scale and turbulent magnetic fields. 71-77
• 
  J. Rashidinia, Reza Mohammadi: Tension spline approach for the numerical solution of nonlinear Klein-Gordon equation. 78-91
• 
  J. L. Movilla, J. I. Climente, J. Planelles: Dielectric polarization in axially-symmetric nanostructures: A computational approach. 92-98
• 
  Jae-Suk Yang, Wooseop Kwak: Application of Wang-Landau sampling to a protein model using SMMP. 99-104
• 
  F. Molnár Jr., T. Szakály, Róbert Mészáros, István Lagzi: Air pollution modelling using a Graphics Processing Unit with CUDA. 105-112
• 
  Tetsuya Sakurai, Hiroto Tadano, Y. Kuramashi: Application of block Krylov subspace algorithms to the Wilson-Dirac equation with multiple right-hand sides in lattice QCD. 113-117
• 
  Anna Manka-Krason, Advera Mwijage, Krzysztof Kulakowski: Clustering in random line graphs. 118-121

• 
  M. ElKacimi, D. Goujdami, H. Przysiezniak, Peter Skands: One universal extra dimension in Pythia. 122-127
• 
  D. Conte, E. Esposito, Beatrice Paternoster, Liviu Gr. Ixaru: Some new uses of the eta_m(Z) functions. 128-137
• 
  P. Bechtle, O. Brein, Sven Heinemeyer, Georg Weiglein, K. E. Williams: HiggsBounds: Confronting arbitrary Higgs sectors with exclusion bounds from LEP and the Tevatron. 138-167
• 
  I. I. Gontchar, M. V. Chushnyakova: A C-code for the double folding interaction potential of two spherical nuclei. 168-182
• 
  M. Januszewski, M. Kostur: Accelerating numerical solution of stochastic differential equations with CUDA. 183-188
• 
  David Eriksson, Johan Rathsman, Oscar Stål: 2HDMC - two-Higgs-doublet model calculator. 189-205
• 
  Evgeny Z. Liverts, Nir Barnea: The two-electron atomic systems. S-states. 206-212
• 
  Guy Engelhard, Jonathan L. Feng, Iftah Galon, David Sanford, Felix Yu: SPICE: Simulation Package for Including Flavor in Collider Events. 213-226
• 
  Mattias Blennow, Enrique Fernandez-Martinez: Neutrino oscillation parameter sampling with MonteCUBES. 227-231
• 
  Benjamin C. Allanach, M. A. Bernhard: Including R-parity violation in the numerical computation of the spectrum of the minimal supersymmetric standard model: SOFTSUSY3.0. 232-245

Volume 181, Number 2, February 2010

• 
  Thomas Unfer, Jean-Pierre Boeuf, François Rogier, Frédéric Thivet: Multi-scale gas discharge simulations using asynchronous adaptive mesh refinement. 247-258
• 
  Andrea Saltelli, Paola Annoni, Ivano Azzini, Francesca Campolongo, Marco Ratto, Stefano Tarantola: Variance based sensitivity analysis of model output. Design and estimator for the total sensitivity index. 259-270
• 
  Liang Li, Ting-Zhu Huang, Yan-Fei Jing, Yong Zhang: Application of the incomplete Cholesky factorization preconditioned Krylov subspace method to the vector finite element method for 3-D electromagnetic scattering problems. 271-276
• 
  Masayuki Toyoda, Taisuke Ozaki: Fast spherical Bessel transform via fast Fourier transform and recurrence formula. 277-282
• 
  Eladio Gutiérrez, Sergio Romero, María A. Trenas, Emilio L. Zapata: Quantum computer simulation using the CUDA programming model. 283-300
• 
  Duo Sun, Rui Jiang, Bing-Hong Wang: Timing of traffic lights and phase separation in two-dimensional traffic flow. 301-304
• 
  A. Andonov, A. Arbuzov, D. Bardin, S. Bondarenko, P. Christova, L. Kalinovskaya, V. Kolesnikov, R. Sadykov: Standard SANC modules. 305-312
• 
  Ji Qiang: A high-order fast method for computing convolution integral with smooth kernel. 313-316
• 
  Cheng-shi Liu: Applications of complete discrimination system for polynomial for classifications of traveling wave solutions to nonlinear differential equations. 317-324
• 
  Hanquan Wang: An efficient Chebyshev-Tau spectral method for Ginzburg-Landau-Schrödinger equations. 325-340
• 
  David W. Holmes, John R. Williams, Peter Tilke: An events based algorithm for distributing concurrent tasks on multi-core architectures. 341-354
• 
  Marco D. Mazzeo, Steven Manos, Peter V. Coveney: In situ ray tracing and computational steering for interactive blood flow simulation. 355-370

• 
  Predrag Lazic, Nicolae Atodiresei, Mojtaba Alaei, Vasile Caciuc, Stefan Blügel, Radovan Brako: JuNoLo - Jülich nonlocal code for parallel post-processing evaluation of vdW-DF correlation energy. 371-379
• 
  Matías Tueros, Sergio Sciutto: TIERRAS: A package to simulate high energy cosmic ray showers underground, underwater and under-ice. 380-392
• 
  S. Jadach, W. Placzek, M. Skrzypek, P. Stoklosa: Markovian Monte Carlo program EvolFMC v.2 for solving QCD evolution equations. 393-412
• 
  Thomas Müller, Frank Grave: GeodesicViewer - A tool for exploring geodesics in the theory of relativity. 413-419
• 
  D. Germanas, R. K. Kalinauskas, S. Mickevicius: Calculation of four-particle harmonic-oscillator transformation brackets. 420-425
• 
  A. Borgoo, O. Scharf, Gediminas Gaigalas, Michel R. Godefroid: Multiconfiguration electron density function for the ATSP2K-package. 426-439
• 
  T. Radtke, S. Fritzsche: Simulation of n-qubit quantum systems. V. Quantum measurements. 440-453

Volume 181, Number 3, March 2010

• 
  Xiao-Gang Wang, Tucker Carrington Jr.: Parallel methods for high-dimensional quantum dynamics. 455-461
• 
  Simone Melchionna, Massimo Bernaschi, Sauro Succi, Efthimios Kaxiras, Frank J. Rybicki, Dimitris Mitsouras, Ahmet U. Coskun, Charles L. Feldman: Hydrokinetic approach to large-scale cardiovascular blood flow. 462-472
• 
  Zhen-Ting Huang, Huan-Chun Hsu, Chau-Lyan Chang, Chin-Tien Wu, T. F. Jiang: Momentum-time flux conservation method for one-dimensional wave equations. 473-480
• 
  Sitao Ling, Minghui Wang, Musheng Wei: Hermitian tridiagonal solution with the least norm to quaternionic least squares problem. 481-488
• 
  Leo Brewin: A brief introduction to Cadabra: A tool for tensor computations in General Relativity. 489-498
• 
  Marco Hülsmann, Thorsten Köddermann, Jadran Vrabec, Dirk Reith: GROW: A gradient-based optimization workflow for the automated development of molecular models. 499-513
• 
  P. Kirby: Calculation of radial prolate spheroidal wave functions of the second kind. 514-519
• 
  Tadeusz Wegner, Andrzej Peczak: Implementation of a strain energy-based nonlinear finite element in the object-oriented environment. 520-531
• 
  M. Antuono, Andrea Colagrossi, S. Marrone, Diego Molteni: Free-surface flows solved by means of SPH schemes with numerical diffusive terms. 532-549
• 
  Jian-You Guo, Miao Yu, Jing Wang, Bao-Mei Yao, Peng Jiao: A relativistic extension of the complex scaling method using oscillator basis functions. 550-556
• 
  Wei Jiang, Yingzhen Lin: Approximate solution of the fractional advection-dispersion equation. 557-561
• 
  O. T. Kosmas, D. S. Vlachos: Phase-fitted discrete Lagrangian integrators. 562-568
• 
  M. D. Mazzeo, M. Ricci, C. Zannoni: The Linked Neighbour List (LNL) method for fast off-lattice Monte Carlo simulations of fluids. 569-581
• 
  Johannes Blümlein, D. J. Broadhurst, J. A. M. Vermaseren: The Multiple Zeta Value data mine. 582-625
• 
  Emmanuel Lorin, André D. Bandrauk: Multiresolution scheme for Time-Dependent Schrödinger Equation. 626-638
• 
  Yonglei Fang, Qinghe Ming, Xinyuan Wu: Extended RKN-type methods with minimal dispersion error for perturbed oscillators. 639-650
• 
  Moritz Riede, Rico Schueppel, Kristian O. Sylvester-Hvid, Martin Kühne, Michael C. Röttger, Klaus Zimmermann, Andreas W. Liehr: On the communication of scientific data: The Full-Metadata Format. 651-662
• 
  Miglena N. Koleva, Lubin G. Vulkov: Two-grid quasilinearization approach to ODEs with applications to model problems in physics and mechanics. 663-670
• 
  R. Yu, J. Zhu, H. Q. Ye: Calculations of single-crystal elastic constants made simple. 671-675

• 
  T. C. Petersen, S. P. Ringer: An electron tomography algorithm for reconstructing 3D morphology using surface tangents of projected scattering interfaces. 676-682
• 
  J. Lundberg, J. Conrad, W. Rolke, A. Lopez: Limits, discovery and cut optimization for a Poisson process with uncertainty in background and signal efficiency: TRolke 2.0. 683-686
• 
  Ardavan F. Oskooi, David Roundy, Mihai Ibanescu, Peter Bermel, J. D. Joannopoulos, Steven G. Johnson: Meep: A flexible free-software package for electromagnetic simulations by the FDTD method. 687-702

• 
  Thomas Müller, Frank Grave: An updated version of the Motion4D-library. 703
• 
  Jaromir Tosiek: The Fedosov *-product in Mathematica. 704
• 
  Georg M. von Hippel: TaylUR 3, a multivariate arbitrary-order automatic differentiation package for Fortran 95. 705-706
• 
  Andrzej Daniluk: Model-Driven Development for scientific computing. Computations of RHEED intensities for a disordered surface. Part I. 707-708
• 
  Andrzej Daniluk: Model-Driven Development for scientific computing. Computations of RHEED intensities for a disordered surface. Part II. 709-710
• 
  Sean McConnell, Stephan Fritzsche, Andrey Surzhykov: DIRAC: A new version of computer algebra tools for studying the properties and behavior of hydrogen-like ions. 711-713

Volume 181, Number 4, April 2010

• 
  B. F. McMillan, S. Jolliet, Alberto Bottino, P. Angelino, T. M. Tran, L. Villard: Rapid Fourier space solution of linear partial integro-differential equations in toroidal magnetic confinement geometries. 715-719
• 
  Nobuaki Ohno, Akira Kageyama: Region-of-interest visualization by CAVE VR system with automatic control of level-of-detail. 720-725
• 
  Wei Su, Ping Qian, Ying Liu, Jiang Shen, Nan-Xian Chen: First principle calculations of yttrium-doped palladium clusters. 726-731
• 
  Grégory Geneste: Free energies of ferroelectric crystals from a microscopic approach. 732-745
• 
  Björn Oetzel, Friedhelm Bechstedt, Karsten Hannewald: Finite-size modelling of electrodes for quantum transport calculations using k-space ab initio techniques. 746-749
• 
  Joana G. Freire, Owen J. Brison, Jason A. C. Gallas: Complete sets of initial vectors for pattern growth with elementary cellular automata. 750-755
• 
  Mathias Wagner, Andrea Walther, Bernd-Jochen Schaefer: On the efficient computation of high-order derivatives for implicitly defined functions. 756-764
• 
  Oliver Marquardt, Sixten Boeck, Christoph Freysoldt, Tilmann Hickel, Jörg Neugebauer: Plane-wave implementation of the real-space k.p formalism and continuum elasticity theory. 765-771
• 
  Mehdi Dehghan, Arezou Ghesmati: Numerical simulation of two-dimensional sine-Gordon solitons via a local weak meshless technique based on the radial point interpolation method (RPIM). 772-786
• 
  Shaozhong Deng: A robust numerical method for self-polarization energy of spherical quantum dots with finite confinement barriers. 787-799
• 
  Daniel Reith, Peter Virnau: Implementation and performance analysis of bridging Monte Carlo moves for off-lattice single chain polymers in globular states. 800-805
• 
  T. Kunze, Sibylle Gemming, S. Numazawa, Michael Schreiber: Low-temperature modeling for degenerate and frustrated Heisenberg systems with anisotropy. 806-812

• 
  M. F. Ciappina, T. Kirchner, M. Schulz: Monte Carlo event generators in atomic collisions: A new tool to tackle the few-body dynamics. 813-820
• 
  Priya Sony, Alok Shukla: A general purpose Fortran 90 electronic structure program for conjugated systems using Pariser-Parr-Pople model. 821-830

• 
  I. V. Grossu, D. Felea, C. Besliu, Al. Jipa, C. C. Bordeianu, E. Stan, T. Esanu: A new version of Visual tool for estimating the fractal dimension of images. 831-832
• 
  David Eriksson, Johan Rathsman, Oscar Stål: 2HDMC - two-Higgs-doublet model calculator. 833-834
• 
  M. Bazzotti, G. Carminati, A. Margiotta, M. Spurio: An update of the generator of atmospheric muons from parametric formulas (MUPAGE). 835-836

Volume 181, Number 5, May 2010

• 
  E. T. Meier, V. S. Lukin, U. Shumlak: Spectral element spatial discretization error in solving highly anisotropic heat conduction equation. 837-841
• 
  N. Mohankumar, A. Natarajan: On an interesting variant of the IMT quadrature. 842-847
• 
  Bongsoo Jang: Solving linear and nonlinear initial value problems by the projected differential transform method. 848-854
• 
  Ivan Duchemin, François Gygi: A scalable and accurate algorithm for the computation of Hartree-Fock exchange. 855-860
• 
  Zhen F. Tian, P. X. Yu: High-order compact ADI (HOC-ADI) method for solving unsteady 2D Schrödinger equation. 861-868
• 
  Samuel F. Martins, Ricardo A. Fonseca, Luís O. Silva, Wei Lu, Warren B. Mori: Numerical simulations of laser wakefield accelerators in optimal Lorentz frames. 869-875
• 
  S. M. Abrarov, Brendan M. Quine, Rajinder K. Jagpal: High-accuracy approximation of the complex probability function by Fourier expansion of exponential multiplier. 876-882
• 
  Hiroto Tadano, Y. Kuramashi, Tetsuya Sakurai: Application of preconditioned block BiCGGR to the Wilson-Dirac equation with multiple right-hand sides in lattice QCD. 883-886
• 
  Marco Hülsmann, Jadran Vrabec, Astrid Maaß, Dirk Reith: Assessment of numerical optimization algorithms for the development of molecular models. 887-905
• 
  J. Sainio: CUDAEASY - a GPU accelerated cosmological lattice program. 906-912
• 
  Monodeep Chakraborty, Jürgen Spitaler, Peter Puschnig, Claudia Ambrosch-Draxl: ATAT@WIEN2k: An interface for cluster expansion based on the linearized augmented planewave method. 913-920
• 
  V. M. Grichine: Geant4 hadron elastic diffuse model. 921-927
• 
  Panagiotis E. Hadjidoukas, C. Bousis, Dimitrios Emfietzoglou: Parallelization of a Monte Carlo particle transport simulation code. 928-936
• 
  Jen-Hao Chen, Jinn-Liang Liu: A numerical method for exact diagonalization of semiconductor quantum dot model. 937-946
• 
  Yongxiang Zhao, Aiguo Xiao: Variational iteration method for singular perturbation initial value problems. 947-956
• 
  Mehrdad Lakestani, Mehdi Dehghan: Numerical solution of Riccati equation using the cubic B-spline scaling functions and Chebyshev cardinal functions. 957-966
• 
  María Eugenia Castro, Alfonso Niño, Camelia Muñoz-Caro: A metaheuristic approach to the optimal definition of molecule-fixed axes in rovibrational Hamiltonians. 967-977

• 
  Weiwei Cai, Laura Kranendonk, Tonghun Lee, Lin Ma: Characterization of composite nanoparticles using an improved light scattering program for coated spheres. 978-984

• 
  David Eriksson, Johan Rathsman, Oscar Stål: Erratum for "2HDMC - two-Higgs-doublet model calculator" [Comput. Phys. Commun. 181 (2010) 189]. 985

Volume 181, Number 6, June 2010

• 
  Frederic Imbeaux, J. B. Lister, G. T. A. Huysmans, W. Zwingmann, M. Airaj, L. Appel, V. Basiuk, David Coster, Lars-Goran Eriksson, Bernard Guillerminet, Denis Kalupin, C. Konz, Gabriele Manduchi, M. Ottaviani, G. Pereverzev, Y. Peysson, O. Sauter, J. Signoret, Per Strand: A generic data structure for integrated modelling of tokamak physics and subsystems. 987-998
• 
  Hyungson Ki: Level set method for two-phase incompressible flows under magnetic fields. 999-1007
• 
  A. Glazov, N. Raicevic, A. Zhokin: Fast simulation of showers in the H1 calorimeter. 1008-1012
• 
  Jonathan R. Clausen, Daniel A. Reasor Jr., Cyrus K. Aidun: Parallel performance of a lattice-Boltzmann/finite element cellular blood flow solver on the IBM Blue Gene/P architecture. 1013-1020
• 
  Changbum Chun, Rathinasamy Sakthivel: Homotopy perturbation technique for solving two-point boundary value problems - comparison with other methods. 1021-1024
• 
  Matthew R. Smith, Fang-An Kuo, Chih-Wei Hsieh, Jen-Perng Yu, Jong-Shinn Wu, Alex Ferguson: Rapid optimization of blast wave mitigation strategies using Quiet Direct Simulation and Genetic Algorithm. 1025-1036
• 
  Seong-Deog Yang, Hyun Geun Lee, Junseok Kim: A phase-field approach for minimizing the area of triply periodic surfaces with volume constraint. 1037-1046
• 
  Minghui Wang: Algorithm Q-LSQR for the least squares problem in quaternionic quantum theory. 1047-1050
• 
  M. J. Rayson: Rapid filtration algorithm to construct a minimal basis on the fly from a primitive Gaussian basis. 1051-1056
• 
  Constantine Bekas, Alessandro Curioni: Very large scale wavefunction orthogonalization in Density Functional Theory electronic structure calculations. 1057-1068
• 
  S. Satake, Yasuhiro Idomura, H. Sugama, Tomohiko Watanabe: Benchmark test of drift-kinetic and gyrokinetic codes through neoclassical transport simulations. 1069-1076
• 
  Florian Staub: From superpotential to model files for FeynArts and CalcHep/CompHep. 1077-1086
• 
  Aleksey M. Serebrennikov: A novel semi-analytic method for the analysis of scattering by dielectric objects immersed in uniform media. 1087-1095
• 
  K. Parand, Mehdi Dehghan, A. R. Rezaei, S. M. Ghaderi: An approximation algorithm for the solution of the nonlinear Lane-Emden type equations arising in astrophysics using Hermite functions collocation method. 1096-1108
• 
  Shamsul Qamar, Sidrah Mudasser: A kinetic flux-vector splitting method for the shallow water magnetohydrodynamics. 1109-1122

• 
  A. R. Samana, F. Krmpotic, C. A. Bertulani: QRAP: A numerical code for projected (Q)uasiparticle (RA)ndom (P)hase approximation. 1123-1135
• 
  B. Gebremariam, T. Duguet, S. K. Bogner: Symbolic integration of a product of two spherical Bessel functions with an additional exponential and polynomial factor. 1136-1143
• 
  Chao-Hsi Chang, Jian-Xiong Wang, Xing-Gang Wu: GENXICC2.0: An upgraded version of the generator for hadronic production of double heavy baryons Xi_cc, Xi_bc and Xi_bb. 1144-1149
• 
  Benzhuo Lu, Xiaolin Cheng, Jingfang Huang, James Andrew McCammon: AFMPB: An adaptive fast multipole Poisson-Boltzmann solver for calculating electrostatics in biomolecular systems. 1150-1160
• 
  C. Carasco: MCNP Output Data Analysis with ROOT (MODAR). 1161-1166
• 
  B. Gebremariam, S. K. Bogner, T. Duguet: Symbolic computation of the Hartree-Fock energy from a chiral EFT three-nucleon interaction at N²LO. 1167-1177

Volume 181, Number 7, July 2010

• 
  Carlo Manuali, Antonio Laganà, Sergio Rampino: GriF: A Grid framework for a Web Service approach to reactive scattering. 1179-1185
• 
  A. V. Wolkov, N. B. Petrovskaya: Higher order discontinuous Galerkin method for acoustic pulse problem. 1186-1194
• 
  Francisco de la Hoz, Fernando Vadillo: An integrating factor for nonlinear Dirac equations. 1195-1203
• 
  A. D'Angola, Gianni Coppa, Mario Capitelli, C. Gorse, Gianpiero Colonna: An efficient energy-conserving numerical model for the electron energy distribution function in the presence of electron-electron collisions. 1204-1211
• 
  Ilya M. Sobol, Sergei Kucherenko: A new derivative based importance criterion for groups of variables and its link with the global sensitivity indices. 1212-1217
• 
  F. P. Fernandes, F. W. S. Lima, J. A. Plascak: Blume-Capel model on directed and undirected small-world Voronoi-Delaunay random lattices. 1218-1223
• 
  A. Golbabai, M. M. Arabshahi: A numerical method for diffusion-convection equation using high-order difference schemes. 1224-1230
• 
  Yaming Chen, Huajun Zhu, Songhe Song: Multi-symplectic splitting method for the coupled nonlinear Schrödinger equation. 1231-1241
• 
  Andrei Bourchtein, Ludmila Bourchtein: On iterated Crank-Nicolson methods for hyperbolic and parabolic equations. 1242-1250
• 
  Th. Monovasilis, Z. Kalogiratou, Tom E. Simos: Symplectic Partitioned Runge-Kutta methods with minimal phase-lag. 1251-1254
• 
  Mehdi Dehghan, Rezvan Salehi: Solution of a nonlinear time-delay model in biology via semi-analytical approaches. 1255-1265
• 
  Reza Mokhtari, Maryam Mohammadi: Numerical solution of GRLW equation using Sinc-collocation method. 1266-1274
• 
  Omar Ramadan: Addendum to: "A FDTD analysis on magnetized plasma of Epstein distribution and reflection calculation" [Computer Physics Communications 180 (1) (2009) 55-60]: A short comment on the equivalence of the shift-operator FDTD method and the bilinear frequency approximation technique for modeling dispersive electromagnetic applications. 1275-1276

• 
  A. Arbey, F. Mahmoudi: SuperIso Relic: A program for calculating relic density and flavor physics observables in Supersymmetry. 1277-1292
• 
  C. Studerus: Reduze - Feynman integral reduction in C++. 1293-1300
• 
  T. Reiter: Optimising code generation with haggies. 1301-1331

• 
  A. I. Ogoyski, S. Kawata, P. H. Popov: Code OK3 - An upgraded version of OK2 with beam wobbling function. 1332-1333

Volume 181, Number 8, August 2010

• 
  Veerle Ledoux, Marnix Van Daele: Solving Sturm-Liouville problems by piecewise perturbation methods, revisited. 1335-1345
• 
  Julián Rincón, D. J. García, K. Hallberg: Improved parallelization techniques for the density matrix renormalization group. 1346-1351
• 
  Toshiaki Kaneko, Takahiro Ueda: A geometric method of sector decomposition. 1352-1361
• 
  S. Stavroyiannis, T. E. Simos: A nonlinear explicit two-step fourth algebraic order method of order infinity for linear periodic initial value problems. 1362-1368
• 
  Linghua Kong, Jingjing Zhang, Ying Cao, Yali Duan, Hong Huang: Semi-explicit symplectic partitioned Runge-Kutta Fourier pseudo-spectral scheme for Klein-Gordon-Schrödinger equations. 1369-1377
• 
  Jacques Bloch, Tobias Breu, Andreas Frommer, Simon Heybrock, Katrin Schäfer, Tilo Wettig: Short-recurrence Krylov subspace methods for the overlap Dirac operator at nonzero chemical potential. 1378-1387
• 
  Rafael B. Frigori: Universality in short-time critical gluodynamics with heat-bath-inspired algorithms. 1388-1391
• 
  Mehrdad Lakestani, Mehdi Dehghan: Collocation and finite difference-collocation methods for the solution of nonlinear Klein-Gordon equation. 1392-1401
• 
  Toni Giorgino, Matt J. Harvey, Gianni De Fabritiis: Distributed computing as a virtual supercomputer: Tools to run and manage large-scale BOINC simulations. 1402-1409
• 
  Mehdi Dehghan, Arezou Ghesmati: Application of the dual reciprocity boundary integral equation technique to solve the nonlinear Klein-Gordon equation. 1410-1418
• 
  M. Tentyukov, J. A. M. Vermaseren: The multithreaded version of FORM. 1419-1427
• 
  M. J. Pueschel, Tilman Dannert, Frank Jenko: On the role of numerical dissipation in gyrokinetic Vlasov simulations of plasma microturbulence. 1428-1437
• 
  Yago Ascasibar: Estimating multidimensional probability fields using the Field Estimator for Arbitrary Spaces (FiEstAS) with applications to astrophysics. 1438-1443
• 
  S. Bianchi, R. Di Leonardo: Real-time optical micro-manipulation using optimized holograms generated on the GPU. 1444-1448
• 
  Christoph Junghans, Simón Poblete: A reference implementation of the adaptive resolution scheme in ESPResSo. 1449-1454

• 
  Masayuki Toyoda, Taisuke Ozaki: LIBERI: Library for numerical evaluation of electron-repulsion integrals. 1455-1463
• 
  I. V. Grossu, C. Besliu, Al. Jipa, C. C. Bordeianu, D. Felea, E. Stan, T. Esanu: Code C# for chaos analysis of relativistic many-body systems. 1464-1470
• 
  María Eugenia Castro, Alfonso Niño, Camelia Muñoz-Caro: Heuristic computation of the rovibrational G matrix in optimized molecule-fixed axes. Gmat 2.1. 1471-1475

Volume 181, Number 9, September 2010

• 
  Marat Valiev, Eric J. Bylaska, Niranjan Govind, Karol Kowalski, Tjerk P. Straatsma, H. J. J. Van Dam, D. Wang, Jarek Nieplocha, Edoardo Aprà, Theresa L. Windus, Wibe A. deJong: NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations. 1477-1489

• 
  M. Honda: Simulation technique of free-boundary equilibrium evolution in plasma ramp-up phase. 1490-1500
• 
  C. A. Duarte: Convergence and instability of iterative procedures on the one-dimensional Schrödinger-Poisson problem. 1501-1509
• 
  Ian Mondragon-Shem, Boris A. Rodríguez, Francisco E. López: Efficient calculation of Coulomb matrix elements for bilayers of confined charge carriers with arbitrary spatial separation. 1510-1516
• 
  Michael A. Clark, Ronald Babich, Kipton Barros, Richard C. Brower, Claudio Rebbi: Solving lattice QCD systems of equations using mixed precision solvers on GPUs. 1517-1528
• 
  Feng-Nan Hwang, Shang-Rong Cai, Yun-Long Shao, Jong-Shinn Wu: Parallel Newton-Krylov-Schwarz algorithms for the three-dimensional Poisson-Boltzmann equation in numerical simulation of colloidal particle interactions. 1529-1537
• 
  Yonglei Fang, Qinghong Li, Xinyuan Wu: Extended RKN methods with FSAL property for oscillatory systems. 1538-1548
• 
  Benjamin Block, Peter Virnau, Tobias Preis: Multi-GPU accelerated multi-spin Monte Carlo simulations of the 2D Ising model. 1549-1556
• 
  Robert Hammerling, Othmar Koch, Christa Simon, Ewa Weinmüller: Numerical solution of singular ODE eigenvalue problems in electronic structure computations. 1557-1561
• 
  R. G. M. van der Sman: MRT Lattice Boltzmann schemes for confined suspension flows. 1562-1569
• 
  Gunnar S. Bali, Sara Collins, Andreas Schäfer: Effective noise reduction techniques for disconnected loops in Lattice QCD. 1570-1583
• 
  G. M. Doctors, Marco D. Mazzeo, Peter V. Coveney: A computationally efficient method for simulating fluid flow in elastic pipes in three dimensions. 1584-1592
• 
  S. Ask, I. V. Akin, L. Benucci, A. De Roeck, M. Goebel, J. Haller: Real emission and virtual exchange of gravitons and unparticles in Pythia8. 1593-1604
• 
  Gaurav Khanna, Justin McKennon: Numerical modeling of gravitational wave sources accelerated by OpenCL. 1605-1611
• 
  T. Binoth, F. Boudjema, G. Dissertori, A. Lazopoulos, A. Denner, S. Dittmaier, R. Frederix, N. Greiner, S. Höche, W. Giele, P. Skands, J. Winter, T. Gleisberg, J. Archibald, G. Heinrich, F. Krauss, D. Maître, M. Huber, J. Huston, N. Kauer: A proposal for a standard interface between Monte Carlo tools and one-loop programs. 1612-1622
• 
  Andriy O. Lyakhov, Artem R. Oganov, Mario Valle: How to predict very large and complex crystal structures. 1623-1632

• 
  Bernie D. Shizgal, Raouf Dridi: Maple code for the calculation of the matrix elements of the Boltzmann collision operators for mixtures. 1633-1640
• 
  B. G. Carlsson, J. Dobaczewski, J. Toivanen, P. Veselý: Solution of self-consistent equations for the N³LO nuclear energy density functional in spherical symmetry. The program hosphe (v1.02). 1641-1657

• 
  Xinyuan Wu: Erratum to "Extended RKN-type methods for numerical integration of perturbed oscillators" [Computer Physics Communications 180 (2009) 1777-1794]. 1658
• 
  S. Nath: Erratum to "TERS v2.0: An improved version of TERS" [Comput. Phys. Commun. 180 (2009) 2392]. 1659

Volume 181, Number 10, October 2010

• 
  J. A. Breslau, Guo-Yong Fu: Implementation of an implicit shear Alfvén operator in the M3D code. 1661-1670
• 
  Pablo M. Dupuy, Hallvard F. Svendsen, Luciano E. Patruno, Hugo A. Jakobsen: Finite-difference stable stencils based on least-square quadric fitting. 1671-1681
• 
  Wanqing Li, Tang Ying, Jian Wan, Dong-Jin Yu: Comparison research on the neighbor list algorithms: Verlet table and linked-cell. 1682-1686
• 
  Larry A. Viehland, Yongbin Chang: Transport cross sections for collisions between particles. 1687-1696
• 
  Jie Cheng, Yanqing Hu, Zengru Di, Ying Fan: Local adaptive mechanism and hierarchic social entropy in opinion formation on complex networks. 1697-1701
• 
  Malgorzata J. Krawczyk: Application of the differential equations method for identifying communities in sparse networks. 1702-1706
• 
  R. G. Edgar, M. A. Clark, K. Dale, Daniel A. Mitchell, Stephen M. Ord, Randall B. Wayth, H. Pfister, Lincoln J. Greenhill: Enabling a high throughput real time data pipeline for a large radio telescope array with GPUs. 1707-1714
• 
  Jakub T. Moscicki, Maciej Wos, Massimo Lamanna, Philippe de Forcrand, Owe Philipsen: Lattice QCD thermodynamics on the Grid. 1715-1726
• 
  C.-S. Chien, S.-L. Chang, Biao Wu: Two-stage continuation algorithms for Bloch waves of Bose-Einstein condensates in optical lattices. 1727-1737
• 
  L. Gr. Ixaru: New numerical method for the eigenvalue problem of the 2D Schrödinger equation. 1738-1742
• 
  Alexei V. Snytnikov, Vitalii A. Vshivkov, W. J. Goedheer: Adaptive mass alteration to model ion-ion recombination in a Particle-in-Cell simulation of silane radio-frequency discharges. 1743-1749
• 
  Michael Watson, Ken-ichi Nishikawa: A method for incorporating the Kerr-Schild metric in electromagnetic particle-in-cell code. 1750-1757

• 
  S. Belov, L. Dudko, D. Kekelidze, A. Sherstnev: HepML, an XML-based format for describing simulated data in high energy physics. 1758-1768
• 
  A. V. Nesterenko, C. Simolo: QCDMAPT: Program package for Analytic approach to QCD. 1769-1775
• 
  Pietro Asinari: Nonlinear Boltzmann equation for the homogeneous isotropic case: Minimal deterministic Matlab program. 1776-1788
• 
  Wafaa M. Fawzy: A code for analysis of the fine structure in near-rigid weakly-bonded open-shell complexes that consist of a diatomic radical in a ³Sigma state and a closed-shell molecule. 1789-1801
• 
  K. Hasegawa, S. Moch, P. Uwer: AutoDipole - Automated generation of dipole subtraction terms -. 1802-1817

• 
  S. Stamatiadis, S. C. Farantos: auto_deriv: Tool for automatic differentiation of a Fortran code. 1818-1819

Volume 181, Number 11, November 2010

• 
  James Tickner: Monte Carlo simulation of X-ray and gamma-ray photon transport on a graphics-processing unit. 1821-1832
• 
  Higinio Ramos, Cesáreo Lorenzo: Review of explicit Falkner methods and its modifications for solving special second-order I.V.P.s. 1833-1841
• 
  Jorge Eduardo Macías-Díaz: On the simulation of the energy transmission in the forbidden band-gap of a spatially discrete double sine-Gordon system. 1842-1849
• 
  Xiaofan Li, Tong Zhu, Meigen Zhang, Guihua Long: Seismic scalar wave equation with variable coefficients modeling by a new convolutional differentiator. 1850-1858
• 
  N. Mohankumar, Tucker Carrington Jr.: A new approach for determining the time step when propagating with the Lanczos algorithm. 1859-1861
• 
  Marc Torrent, N. A. W. Holzwarth, François Jollet, David Harris, Nicholas Lepley, Xiao Xu: Electronic structure packages: Two implementations of the projector augmented wave (PAW) formalism. 1862-1867
• 
  R. Jalilian: Non-polynomial spline method for solving Bratu's problem. 1868-1872
• 
  Xinyuan Wu, Xiong You, Wei Shi, Bin Wang: ERKN integrators for systems of oscillatory second-order differential equations. 1873-1887
• 
  Jan Kunes, Ryotaro Arita, Philipp Wissgott, Alessandro Toschi, Hiroaki Ikeda, Karsten Held: Wien2wannier: From linearized augmented plane waves to maximally localized Wannier functions. 1888-1895

• 
  Gary A. Huber, James Andrew McCammon: Browndye: A software package for Brownian dynamics. 1896-1905
• 
  Ajay Rawat, N. Mohankumar: Milne, a routine for the numerical solution of Milne's problem. 1906-1910
• 
  Natan Osterman: TweezPal - Optical tweezers analysis and calibration software. 1911-1916
• 
  Douglas M. Gingrich: Monte Carlo event generator for black hole production and decay in proton-proton collisions - QBH version 1.02. 1917-1924

• 
  Jean Luc Lamotte, Jean Marie Chesneaux, Fabienne Jézéquel: CADNA_C: A version of CADNA for use with C or C++ programs. 1925-1926
• 
  Fabienne Jézéquel, Jean Marie Chesneaux, Jean Luc Lamotte: A new version of the CADNA library for estimating round-off error propagation in Fortran programs. 1927-1928

Volume 181, Number 12, December 2010

• 
  E. Ramos, J. E. Roman, S. Cardona-Serra, J. M. Clemente-Juan: Parallel implementation of the MAGPACK package for the analysis of high-nuclearity spin clusters. 1929-1940
• 
  R. Pittau: Testing and improving the numerical accuracy of the NLO predictions. 1941-1946
• 
  Akbar Mohebbi, Mehdi Dehghan: High-order scheme for determination of a control parameter in an inverse problem from the over-specified data. 1947-1954
• 
  Xinyuan Wu, Bin Wang: Multidimensional adapted Runge-Kutta-Nyström methods for oscillatory systems. 1955-1962
• 
  Jorge Francés, Cristian Neipp, Manuel Pérez-Molina, Augusto Beléndez: Rigorous interference and diffraction analysis of diffractive optic elements using the finite-difference time-domain method. 1963-1973
• 
  Weiwei Cai, Lin Ma: Comparison of approaches based on optimization and algebraic iteration for binary tomography. 1974-1981
• 
  M. Carrettoni, O. Cremonesi: Generation of noise time series with arbitrary power spectrum. 1982-1985
• 
  Nobuyuki Masuda, Takashige Sugie, Tomoyoshi Ito, Shinjiro Tanaka, Yu Hamada, Shin-ichi Satake, Tomoaki Kunugi, Kazuho Sato: Special purpose computer system with highly parallel pipelines for flow visualization using holography technology. 1986-1989
• 
  Ali Shokri, Mehdi Dehghan: A Not-a-Knot meshless method using radial basis functions and predictor-corrector scheme to the numerical solution of improved Boussinesq equation. 1990-2000
• 
  J. Ambia-Garrido, Arnold Vainrub, B. Montgomery Pettitt: A model for structure and thermodynamics of ssDNA and dsDNA near a surface: A coarse grained approach. 2001-2007
• 
  Emily M. Ryan, Alexandre M. Tartakovsky, Cristina H. Amon: A novel method for modeling Neumann and Robin boundary conditions in smoothed particle hydrodynamics. 2008-2023
• 
  Ji Qiang, Xiaoye Li: Particle-field decomposition and domain decomposition in parallel particle-in-cell beam dynamics simulation. 2024-2034
• 
  Magdalena Mierzwiczak, Jan Adam Kolodziej: Application of the method of fundamental solutions and radial basis functions for inverse transient heat source problem. 2035-2043
• 
  M. Calvo, J. M. Franco, J. I. Montijano, L. Rández: Symmetric and symplectic exponentially fitted Runge-Kutta methods of high order. 2044-2056
• 
  Tian Qiu, Tarik Hadzibeganovic, Guang Chen, Li-Xin Zhong, Xiao-Run Wu: Cooperation in the snowdrift game on directed small-world networks under self-questioning and noisy conditions. 2057-2062
• 
  Spencer E. Olson, Andrew J. Christlieb, Fredrik K. Fatemi: PID feedback for load-balanced parallel gridless DSMC. 2063-2071
• 
  Edoardo Patelli, Helmut J. Pradlwarter, Gerhart I. Schuëller: Global sensitivity of structural variability by random sampling. 2072-2081

• 
  William J. Menz, Matthew J. Penna, Mark J. Biggs: TNAMD: Implementation of TIGER2 in NAMD. 2082-2085
• 
  Min Hyung Cho, Wei Cai: A Wideband Fast Multipole Method for the two-dimensional complex Helmholtz equation. 2086-2090
• 
  Barry I. Schneider, Javier Segura, Amparo Gil, Xiaoxu Guan, Klaus Bartschat: A new Fortran 90 program to compute regular and irregular associated Legendre functions. 2091-2097
• 
  Liang-You Peng, Qihuang Gong: An accurate Fortran code for computing hydrogenic continuum wave functions at a wide range of parameters. 2098-2101
• 
  Arnaud Marmier, Zoe A. D. Lethbridge, Richard I. Walton, Christopher W. Smith, Stephen C. Parker, Kenneth E. Evans: ElAM: A computer program for the analysis and representation of anisotropic elastic properties. 2102-2115
• 
  Ján Busa, Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Ming-Chya Wu: CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins. 2116-2125
• 
  Sergio Davis, Claudia Loyola, Felipe González, Joaquín Peralta: Las Palmeras Molecular Dynamics: A flexible and modular molecular dynamics code. 2126-2139
• 
  Jesse Noffsinger, Feliciano Giustino, Brad D. Malone, Cheol-Hwan Park, Steven G. Louie, Marvin L. Cohen: EPW: A program for calculating the electron-phonon coupling using maximally localized Wannier functions. 2140-2148
• 
  Martin Kröger, Markus Hütter: Automated symbolic calculations in nonequilibrium thermodynamics. 2149-2157
• 
  G. von Winckel, Alfio Borzì: QUCON: A fast Krylov-Newton code for dipole quantum control problems. 2158-2163
• 
  Scott Rostrup, Hans De Sterck: Parallel hyperbolic PDE simulation on clusters: Cell versus GPU. 2164-2179
• 
  J. Rosiek, P. H. Chankowski, A. Dedes, S. Jäger, P. Tanedo: SUSY_FLAVOR: A computational tool for FCNC and CP-violating processes in the MSSM. 2180-2205

• 
  Bo Zhang, Jingfang Huang, Nikos Pitsianis, Xiaobai Sun: Revision of FMM-Yukawa: An adaptive fast multipole method for screened Coulomb interactions. 2206-2207
• 
  Linda Hung, Chen Huang, Ilgyou Shin, Gregory S. Ho, Vincent L. Lignères, Emily A. Carter: Introducing PROFESS 2.0: A parallelized, fully linear scaling program for orbital-free density functional theory calculations. 2208-2209
• 
  C. Carasco: MCNP output data analysis with ROOT (MODAR). 2210-2211
• 
  Peter Koval, J. D. Talman: Update of spherical Bessel transform: FFTW and OpenMP. 2212-2213

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