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ORCIDBMC Genomics, Volume 17 - Supplements
Volume 17, Number S-1, January 2016
- Chunfang Zheng, David Sankoff:
Locating rearrangement events in a phylogeny based on highly fragmented assemblies. 1 - Naoki Nariai, Kaname Kojima, Takahiro Mimori, Yosuke Kawai, Masao Nagasaki
:
A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes. 2 - Wei Jiang, Weichuan Yu:
Power estimation and sample size determination for replication studies of genome-wide association studies. 3 - Feifei He, Yang Li, Yu-Hang Tang, Jian Ma, Huaiqiu Zhu:
Identifying micro-inversions using high-throughput sequencing reads. 4 - Min-Su Kim, Benjamin Hur, Sun Kim:
RDDpred: a condition-specific RNA-editing prediction model from RNA-seq data. 5 - Theodore Roman, Lu Xie, Russell Schwartz:
Medoidshift clustering applied to genomic bulk tumor data. 6 - S. M. Masud Karim, Lin Liu, Thuc Duy Le, Jiuyong Li:
Identification of miRNA-mRNA regulatory modules by exploring collective group relationships. 7 - Hussein A. Hejase, Kevin J. Liu:
Mapping the genomic architecture of adaptive traits with interspecific introgressive origin: a coalescent-based approach. 8 - Van-Minh Bui, Shun-Long Weng, Cheng-Tsung Lu, Tzu-Hao Chang, Julia Tzu-Ya Weng, Tzong-Yi Lee:
SOHSite: incorporating evolutionary information and physicochemical properties to identify protein S-sulfenylation sites. 9 - Wei Vivian Li, Zahra S. Razaee, Jingyi Jessica Li:
Epigenome overlap measure (EPOM) for comparing tissue/cell types based on chromatin states. 10 - Yuting Ye, Jingyi Jessica Li:
NMFP: a non-negative matrix factorization based preselection method to increase accuracy of identifying mRNA isoforms from RNA-seq data. 11 - Goro Terai, Junichi Iwakiri, Tomoshi Kameda, Michiaki Hamada, Kiyoshi Asai:
Comprehensive prediction of lncRNA-RNA interactions in human transcriptome. 12 - Yu-Chen Liu, Sheng-Da Hsu, Chih-Hung Chou, Wei-Yun Huang, Yu-Hung Chen, Chia-Yu Liu, Guan-Jay Lyu, Shao-Zhen Huang, Sergey Aganezov Jr., Max A. Alekseyev, Chung-Der Hsiao, Hsien-Da Huang:
Transcriptome sequencing based annotation and homologous evidence based scaffolding of Anguilla japonica draft genome. 13 - Nishanth Ulhas Nair, Laura Hunter, Mingfu Shao, Paulina Grnarova, Yu Lin, Philipp Bucher, Bernard M. E. Moret:
A maximum-likelihood approach for building cell-type trees by lifting. 14 - Jaroslaw Paszek, Pawel Górecki:
Genomic duplication problems for unrooted gene trees. 15
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