Ruhong Zhou

	2011
17		Julie Bernauer, Samuel Flores, Xuhui Huang, Seokmin Shin, Ruhong Zhou: Session Introduction. Pacific Symposium on Biocomputing 2011: 177-180
16		Zhen Xia, Payel Das, Tien Huynh, Ajay K. Royyuru, Ruhong Zhou: Modeling mutations of influenza virus with IBM Blue Gene. IBM Journal of Research and Development 55(5): 7 (2011)
	2010
15		Samuel Flores, Julie Bernauer, Xuhui Huang, Ruhong Zhou, Seokmin Shin: Session Introduction. Pacific Symposium on Biocomputing 2010: 200-204
	2009
14		Zhen Xia, Gulei Jin, Jun Zhu, Ruhong Zhou: Using a mutual information-based site transition network to map the genetic evolution of influenza A/H3N2 virus. Bioinformatics 25(18): 2309-2317 (2009)
13		Payel Das, Jingyuan Li, Ajay K. Royyuru, Ruhong Zhou: Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity. Journal of Computational Chemistry 30(11): 1654-1663 (2009)
	2008
12		Ruhong Zhou, Maria Eleftheriou, Chung-Chau Hon, Robert S. Germain, Ajay K. Royyuru, Bruce J. Berne: Massively parallel molecular dynamics simulations of lysozyme unfolding. IBM Journal of Research and Development 52(1-2): 19-30 (2008)
	2007
11		Ruhong Zhou, Laxmi Parida, Kush Kapila, Sudhir P. Mudur: PROTERAN: animated terrain evolution for visual analysis of patterns in protein folding trajectory. Bioinformatics 23(1): 99-106 (2007)
	2006
10		Maria Eleftheriou, Aleksandr Rayshubskiy, Jed W. Pitera, Blake G. Fitch, Ruhong Zhou, Robert S. Germain: Parallel implementation of the replica exchange molecular dynamics algorithm on Blue Gene/L. IPDPS 2006
9		Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, T. J. Christopher Ward, Mark Giampapa, Yuriy Zhestkov, Michael Pitman, Frank Suits, Alan Grossfield, Jed W. Pitera, William C. Swope, Ruhong Zhou, Scott Feller, Robert S. Germain: Blue Matter: Strong Scaling of Molecular Dynamics on Blue Gene/L. International Conference on Computational Science (2) 2006: 846-854
8		Ruhong Zhou, Ajay K. Royyuru, Prasanna Athma, Frank Suits, B. David Silverman: Magnitude and spatial orientation of the hydrophobic moments of multi-domain proteins. IJBRA 2(2): 161-176 (2006)
	2005
7		J. Feng, Laxmi Parida, Ruhong Zhou: Protein folding trajectory analysis using patterned clusters. APBC 2005: 95-104
6		Lei Ye, Huajun Chen, Ting Liu, Zhaohui Wu, Jingyuan Li, Ruhong Zhou: A Wavelet Approach for the Analysis of Folding Trajectory of Protein Trp-cage. J. Bioinformatics and Computational Biology 3(6): 1351-1370 (2005)
	2003
5		Blake G. Fitch, Robert S. Germain, Mark P. Mendell, Jed W. Pitera, Michael Pitman, Aleksandr Rayshubskiy, Yuk Yin Sham, Frank Suits, William C. Swope, T. J. Christopher Ward, Yuriy Zhestkov, Ruhong Zhou: Blue Matter, an application framework for molecular simulation on Blue Gene. J. Parallel Distrib. Comput. 63(7-8): 759-773 (2003)
4		George A. Kaminski, Richard A. Friesner, Ruhong Zhou: A computationally inexpensive modification of the point dipole electrostatic polarization model for molecular simulations. Journal of Computational Chemistry 24(3): 267-276 (2003)
	2002
3		Ruhong Zhou, B. David Silverman: Detecting Native Protein Folds Among Large Decoy Sets with Hydrophobic Moment Profiling. Pacific Symposium on Biocomputing 2002: 673-684
2		George A. Kaminski, Harry A. Stern, Bruce J. Berne, Richard A. Friesner, Yixiang X. Cao, Robert B. Murphy, Ruhong Zhou, Thomas A. Halgren: Development of a polarizable force field for proteins via ab initio quantum chemistry: First generation model and gas phase tests. Journal of Computational Chemistry 23(16): 1515-1531 (2002)
	2001
1		Frances E. Allen, George S. Almasi, Wanda Andreoni, Daniel K. Beece, Bruce J. Berne, Arthur A. Bright, José R. Brunheroto, Calin Cascaval, José G. Castaños, Paul Coteus, Paul Crumley, Alessandro Curioni, Monty Denneau, Wilm E. Donath, Maria Eleftheriou, Blake G. Fitch, Bruce M. Fleischer, Christos J. Georgiou, Robert S. Germain, Mark Giampapa, Donna L. Gresh, Manish Gupta, Ruud A. Haring, C. T. Howard Ho, Peter H. Hochschild, Susan Flynn Hummel, Tiziana Jonas, Derek Lieber, Glenn J. Martyna, Kiran K. Maturu, José E. Moreira, Dennis M. Newns, Matthew Newton, Robert Philhower, Thomas Picunko, Jed W. Pitera, Michael Pitman, Rick A. Rand, Ajay K. Royyuru, Valentina Salapura, Alda Sanomiya, Rahul S. Shah, Yuk Yin Sham, Sarabjeet Singh, Marc Snir, Frank Suits, Richard A. Swetz, William C. Swope, Nagesh K. Vishnumurthy, T. J. Christopher Ward, Henry S. Warren Jr., Ruhong Zhou: Blue Gene: A vision for protein science using a petaflop supercomputer. IBM Systems Journal 40(2): 310-327 (2001)

Coauthor Index

1	Frances E. Allen	[1]
2	George Almási (George S. Almasi)	[1]
3	Wanda Andreoni	[1]
4	Prasanna Athma	[8]
5	Daniel K. Beece	[1]
6	Julie Bernauer	[15] [17]
7	Bruce J. Berne	[1] [2] [12]
8	Arthur A. Bright	[1]
9	José R. Brunheroto	[1]
10	Yixiang X. Cao	[2]
11	Calin Cascaval	[1]
12	José G. Castaños	[1]
13	Huajun Chen	[6]
14	Paul Coteus	[1]
15	Paul Crumley	[1]
16	Alessandro Curioni	[1]
17	Payel Das	[13] [16]
18	Monty Denneau	[1]
19	Wilm E. Donath	[1]
20	Maria Eleftheriou	[1] [9] [10] [12]
21	Scott Feller	[9]
22	J. Feng	[7]
23	Blake G. Fitch	[1] [5] [9] [10]
24	Bruce M. Fleischer	[1]
25	Samuel Flores (Samuel Coulbourn Flores)	[15] [17]
26	Richard A. Friesner	[2] [4]
27	Christos J. Georgiou	[1]
28	Robert S. Germain	[1] [5] [9] [10] [12]
29	Mark Giampapa	[1] [9]
30	Donna L. Gresh	[1]
31	Alan Grossfield	[9]
32	Manish Gupta	[1]
33	Thomas A. Halgren	[2]
34	Ruud A. Haring	[1]
35	C. T. Howard Ho (Howard Ho, Ching-Tien Ho)	[1]
36	Peter H. Hochschild	[1]
37	Chung-Chau Hon	[12]
38	Xuhui Huang	[15] [17]
39	Susan Flynn Hummel	[1]
40	Tien Huynh	[16]
41	Gulei Jin	[14]
42	Tiziana Jonas	[1]
43	George A. Kaminski	[2] [4]
44	Kush Kapila	[11]
45	Jingyuan Li	[6] [13]
46	Derek Lieber	[1]
47	Ting Liu	[6]
48	Glenn J. Martyna	[1]
49	Kiran K. Maturu	[1]
50	Mark P. Mendell	[5]
51	José E. Moreira	[1]
52	Sudhir P. Mudur	[11]
53	Robert B. Murphy	[2]
54	Dennis M. Newns	[1]
55	Matthew Newton	[1]
56	Laxmi Parida	[7] [11]
57	Robert Philhower	[1]
58	Thomas Picunko	[1]
59	Jed W. Pitera	[1] [5] [9] [10]
60	Michael Pitman	[1] [5] [9]
61	Rick A. Rand	[1]
62	Aleksandr Rayshubskiy	[5] [9] [10]
63	Ajay K. Royyuru	[1] [8] [12] [13] [16]
64	Valentina Salapura	[1]
65	Alda Sanomiya	[1]
66	Rahul S. Shah	[1]
67	Yuk Yin Sham	[1] [5]
68	Seokmin Shin	[15] [17]
69	B. David Silverman	[3] [8]
70	Sarabjeet Singh	[1]
71	Marc Snir	[1]
72	Harry A. Stern	[2]
73	Frank Suits	[1] [5] [8] [9]
74	Richard A. Swetz	[1]
75	William C. Swope	[1] [5] [9]
76	Nagesh K. Vishnumurthy	[1]
77	T. J. Christopher Ward	[1] [5] [9]
78	Henry S. Warren Jr.	[1]
79	Zhaohui Wu	[6]
80	Zhen Xia	[14] [16]
81	Lei Ye	[6]
82	Yuriy Zhestkov	[5] [9]
83	Jun Zhu	[14]

Colors in the list of coauthors

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