 | 2011 |
| 8 |  | Masao Nagasaki,
Ayumu Saito,
André Fujita,
Georg Tremmel,
Kazuko Ueno,
Emi Ikeda,
Euna Jeong,
Satoru Miyano:
Systems biology model repository for macrophage pathway simulation.
Bioinformatics 27(11): 1591-1593 (2011) |
| 7 |  | Euna Jeong,
Masao Nagasaki,
Emi Ikeda,
Yayoi Sekiya,
Ayumu Saito,
Satoru Miyano:
CSO validator: improving manual curation workflow for biological pathways.
Bioinformatics 27(17): 2471-2472 (2011) |
| 6 |  | Chuan Hock Koh,
Masao Nagasaki,
Ayumu Saito,
Chen Li,
Limsoon Wong,
Satoru Miyano:
MIRACH: efficient model checker for quantitative biological pathway models.
Bioinformatics 27(5): 734-735 (2011) |
| 2010 |
| 5 |  | Chuan Hock Koh,
Masao Nagasaki,
Ayumu Saito,
Limsoon Wong,
Satoru Miyano:
DA 1.0: parameter estimation of biological pathways using data assimilation approach.
Bioinformatics 26(14): 1794-1796 (2010) |
| 2009 |
| 4 |  | Shamim Ahmed,
Ayumu Saito,
Miho Suzuki,
Naoto Nemoto,
Koichi Nishigaki:
Host-parasite relations of bacteria and phages can be unveiled by Oligostickiness, a measure of relaxed sequence similarity.
Bioinformatics 25(5): 563-570 (2009) |
| 2008 |
| 3 |  | Kazuyuki Numata,
Ryo Yoshida,
Masao Nagasaki,
Ayumu Saito,
Seiya Imoto,
Satoru Miyano:
ExonMiner: Web service for analysis of GeneChip Exon array data.
BMC Bioinformatics 9: (2008) |
| 2007 |
| 2 |  | Ayumu Saito,
Masao Nagasaki,
Masaaki Oyama,
Hiroko Kozuka-Hata,
Kentaro Semba,
Sumio Sugano,
Tadashi Yamamoto,
Satoru Miyano:
AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction.
BMC Bioinformatics 8: (2007) |
| 2002 |
| 1 |  | Koichi Nishigaki,
Ayumu Saito:
Genome structures embossed by oligonucleotide-stickiness.
Bioinformatics 18(9): 1153-1161 (2002) |