 | 2011 |
| 8 |  | Hyungro Lee,
Youngik Yang,
Heejoon Chae,
Seungyoon Nam,
Donghoon Choi,
Patanachai Tangchaisin,
Chathura Herath,
Suresh Marru,
Kenneth P. Nephew,
Sun Kim:
BioVLAB-MMIA: A Reconfigurable Cloud Computing Environment for microRNA and mRNA Integrated Analysis.
BIBM 2011: 494-499 |
| 2009 |
| 7 |  | Fuxiao Xin,
Meng Li,
Curtis Balch,
Michael Thomson,
Meiyun Fan,
Yunlong Liu,
Scott M. Hammond,
Sun Kim,
Kenneth P. Nephew:
Computational analysis of microRNA profiles and their target genes suggests significant involvement in breast cancer antiestrogen resistance.
Bioinformatics 25(4): 430-434 (2009) |
| 6 |  | Seungyoon Nam,
Meng Li,
Kwangmin Choi,
Curtis Balch,
Sun Kim,
Kenneth P. Nephew:
MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression.
Nucleic Acids Research 37(Web-Server-Issue): 356-362 (2009) |
| 2008 |
| 5 |  | Sun Kim,
Meng Li,
Hyun-il Henry Paik,
Kenneth P. Nephew,
Huidong Shi,
Robin Kramer,
Dong Xu,
T.-H. Huang:
Predicting DNA Methylation Susceptibility Using CpG Flanking Sequences.
Pacific Symposium on Biocomputing 2008: 315-326 |
| 4 |  | Meng Li,
Hyun-il Henry Paik,
Curtis Balch,
Yoosung Kim,
Lang Li,
Tim Hui-Ming Huang,
Kenneth P. Nephew,
Sun Kim:
Enriched transcription factor binding sites in hypermethylated gene promoters in drug resistant cancer cells.
Bioinformatics 24(16): 1745-1748 (2008) |
| 2007 |
| 3 |  | Guohua Wang,
Xin Wang,
Lang Li,
Kenneth P. Nephew,
Howard J. Edenberg,
Feng Zhou,
Yunlong Liu:
Identification of Transcription Factor and microRNA Binding Sites from Array-derived Gene Expression Data.
BIOCOMP 2007: 657-663 |
| 2006 |
| 2 |  | Lang Li,
Alfred S. L. Cheng,
Victor X. Jin,
Henry H. Paik,
Meiyun Fan,
Xiaoman Li,
Wei Zhang,
Jason Robarge,
Curtis Balch,
Ramana V. Davuluri,
Sun Kim,
Tim Hui-Ming Huang,
Kenneth P. Nephew:
A mixture model-based discriminate analysis for identifying ordered transcription factor binding site pairs in gene promoters directly regulated by estrogen receptor-alpha.
Bioinformatics 22(18): 2210-2216 (2006) |
| 2005 |
| 1 |  | Lang Li,
Huidong Shi,
Constantin Yiannoutsos,
Tim Hui-Ming Huang,
Kenneth P. Nephew:
Epigenetic Hypothesis Tests for Methylation and Acetylation in a Triple Microarray System.
Journal of Computational Biology 12(3): 370-390 (2005) |